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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr2 | genome | chr2:979256..981652 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO02G03650.1 vs.
Match: XP_005856231.1 (aldo keto reductase family protein, partial [Nannochloropsis gaditana CCMP526]; EKU20128.1 aldo keto reductase family protein, partial [Nannochloropsis gaditana CCMP526]) HSP 1 Score: 921.8 bits (2381), Expect = 1.400e-264 Identity = 461/719 (64.12%), Postives = 549/719 (76.36%), Query Frame = 0
Query: 44 LPRSSSTQLRSDVFFNFEGLKRRLNLTHFSNPDLEPPPSLAPLQEEDYINRPDLVKAREIAKALNTELTAPGNYPSVALYFHVAAHHLQSFREALQDFIQAQQHREKNGDVFWEAFQLIGLPAELEYTPYPGSQAGRVPSRSRVCLCGTFATQQAEERAKHDVMRWRSTLKSRLAAYRLLGEDENDPVETMPMSQAVYRRIRPKGPPTQPRTSTTHPVTPSSVFLLAFLQASWSSERKIRLHLERLTRYMAEVTDPDPFLGGPAERTELYIDPSYPSAHRVWHQFPNQAAMVKCLSGPYVEFLGEGAKFRARVNHVEQAFAPLVGSGIEGEGKGKGELFPPTLSVVLSSCGSYMPLVGYGTSVYRGREREGELPLGEAMRIALRAGCRLLDCSPNYGTQKEVGEVLCQVFEAHETTRERVFIVSSLSWEVVVQTGGDRDEIKADVRKTFQELNVEYLDLLLLPYVVGSDDENERHASLWRAMEALVEEGLVRHLGVGGFPLESLKALQSDPTIACQPVVCQLEHHPFYRDETLVEYCEENGIQLLAHTPLGRPALSRPPGSNPLREPLVEMSATALECSPAQVVLRWAVQQGVAVVPNSLSRSHILENSNLHTFTLAPFRVDVLRDMAAIRNLRFADPMITATASGRMMTPPYSLEDVRRHGLVYGDDGAIIPPGSAYKYMELTVEVFERLDLGDMAELLLEPRTIDGTFPGMDVEPIE 763
L R++ T L SD FFNFEGL++RLNLTHF + PP L P +ED++NRPDLVKAREIA L E ++ YP+V +YFHVAAHHLQS+REAL FI AQ+ E++ +VFWEAFQ +GLP E++ Y QAGRVPSRSR+ LCGTFA +AEERAKH + +WRS L +RL AYRL G+D D VE MPMSQAVYRRIRP GPPTQP T+ ++P S FLL+FLQASWSSERKIR HL+RL +Y+ EVT GGPAER ELYIDPSYPSAHR+WHQF + AMV CL Y FL GAKFRARVNHVEQ FAP VG I ++FPPTLS LSS YMPLVGYGT VYRGREREG L L +A+R ALRAGCRLLDCSP+YGTQ EVGE L Q+F+AHET RER+FIVSSLS EV + GD E+ V ++ Q+L+ +YLDLLLLPY++ + +RH + W+AME L+ EG+VRH+GVGGFPL SLKAL DPT+ QP VCQLEHHPFYR ++LVE+C E IQLLA+TPLGRPALSRPPG NPL+EPL+EMS+TALECSPAQ+ LRWAVQQGVAV+PNSL R+HILENS+LH+FTLAPFR++VL +MAA+RN+ F D R PY+LE++R HG VY D G +I PG+ Y+Y++LT++VFERLDL D+ EL L PR IDG FPGMDVEPIE
Sbjct: 66 LSRTTLTPLYSDAFFNFEGLQKRLNLTHFDDSSQHSPPPLRPNPQEDFVNRPDLVKAREIADKLAPEFSSHDKYPTVVIYFHVAAHHLQSWREALFYFIIAQKQIERDEEVFWEAFQHVGLPPEVKDINYLSRQAGRVPSRSRLALCGTFANTKAEERAKHALSQWRSDLNARLMAYRLQGDDVRDAVEVMPMSQAVYRRIRPSGPPTQPSQITSCSISPESTFLLSFLQASWSSERKIRRHLDRLDKYLDEVTGSASTRGGPAERAELYIDPSYPSAHRIWHQFSDSNAMVACLRKDYANFLEGGAKFRARVNHVEQVFAP-VGCAI------SQKMFPPTLSRRLSS-SCYMPLVGYGTRVYRGREREGTLTLLDAVRTALRAGCRLLDCSPDYGTQPEVGEALRQMFKAHETQRERLFIVSSLSIEVAM-NHGDVSEVSTHVNESIQQLHCDYLDLLLLPYII----DKQRHIAAWKAMEVLLSEGVVRHIGVGGFPLSSLKALCEDPTLTWQPAVCQLEHHPFYRPDSLVEFCGERHIQLLANTPLGRPALSRPPGQNPLKEPLIEMSSTALECSPAQIALRWAVQQGVAVIPNSLCRTHILENSDLHSFTLAPFRIEVLHEMAAVRNMSFTDGSSVRKGEER---APYTLEEIRAHGFVYDDGGTLIAPGNPYEYLQLTIDVFERLDLSDVPELALAPREIDGAFPGMDVEPIE 768
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO02G03650.1 ID=NO02G03650.1|Name=NO02G03650.1|organism=Nannochloropsis oceanica|type=mRNA|length=2397bp
ACAGCTCCCCTGCCTCATGTTCCTCCCACCATGACTCGCCCGCTGCATCT
CCTCCTCCCCCTCCTCCTCTTCCTCCTCTCCTCCGTCTTTCCTATGAACC
GGGCATTCTACCCCCGTCCCCGGGTCGGTGGCTTATCCATCTCCTCGTCT
TCGCCGACATTACCACGATCGTCCTCCACACAGCTGCGCTCGGATGTCTT
CTTCAATTTTGAGGGCCTCAAGCGACGGCTAAATCTAACCCACTTTAGCA
ACCCGGATTTGGAGCCTCCTCCATCATTGGCACCGCTCCAGGAAGAGGAC
TACATAAATCGTCCTGACCTTGTCAAGGCCAGGGAGATTGCCAAGGCTCT
CAATACTGAACTGACGGCGCCCGGCAACTACCCCAGCGTCGCCCTCTACT
TTCATGTGGCCGCCCACCATCTGCAGAGTTTTCGAGAGGCCCTTCAAGAC
TTTATTCAGGCGCAACAACACAGGGAAAAGAATGGCGATGTCTTCTGGGA
GGCATTCCAGTTGATAGGGCTACCTGCCGAATTGGAATACACACCTTACC
CCGGCAGTCAAGCAGGCCGCGTCCCCTCTCGCTCCCGTGTTTGCTTGTGT
GGGACCTTTGCGACTCAGCAGGCCGAGGAACGGGCCAAACATGATGTGAT
GAGATGGCGATCTACCCTAAAATCTCGATTGGCGGCCTACCGTCTCCTGG
GGGAGGATGAGAACGATCCCGTGGAGACCATGCCCATGAGTCAAGCCGTC
TACAGGCGCATCCGACCCAAAGGCCCTCCCACACAGCCTCGAACCTCCAC
CACCCACCCTGTAACCCCATCTTCCGTCTTTTTACTCGCCTTTTTACAAG
CCAGCTGGTCATCAGAGCGCAAGATTCGTCTGCATCTCGAGCGTCTCACG
CGTTATATGGCCGAGGTCACTGACCCTGATCCCTTCCTAGGGGGGCCGGC
GGAACGTACGGAGCTTTACATCGATCCCTCCTACCCCAGCGCGCACCGGG
TGTGGCACCAGTTTCCTAATCAAGCTGCGATGGTGAAGTGTTTGAGTGGA
CCTTATGTGGAGTTTTTGGGGGAAGGAGCCAAATTTCGAGCAAGGGTGAA
TCATGTAGAGCAAGCCTTTGCGCCATTGGTCGGGAGCGGGATTGAGGGAG
AGGGAAAGGGGAAAGGAGAGCTTTTCCCTCCTACTCTATCTGTTGTGTTG
TCGTCTTGTGGTTCTTATATGCCCTTGGTAGGGTACGGAACAAGCGTTTA
TCGAGGGCGGGAGCGAGAGGGGGAGCTGCCACTTGGGGAAGCTATGCGAA
TTGCCTTGCGTGCAGGTTGCCGCCTCCTCGATTGCAGTCCTAATTATGGC
ACACAAAAGGAAGTAGGTGAGGTGCTATGCCAAGTATTTGAGGCCCATGA
AACAACGCGGGAGCGGGTGTTCATCGTGAGCAGTTTGAGTTGGGAGGTGG
TGGTGCAGACAGGCGGAGATAGGGACGAAATTAAGGCAGACGTGAGGAAA
ACATTCCAGGAGCTCAATGTCGAATACTTAGACCTTTTGCTGCTGCCGTA
CGTAGTAGGGAGCGACGACGAGAACGAGAGGCATGCGTCGTTGTGGAGGG
CTATGGAGGCGTTGGTGGAGGAAGGGCTGGTGCGTCATTTAGGCGTGGGA
GGGTTTCCTCTTGAAAGTCTGAAGGCGCTGCAGAGCGACCCTACCATCGC
CTGCCAGCCGGTGGTCTGTCAATTGGAGCACCATCCTTTTTACCGTGACG
AGACTTTGGTGGAGTACTGTGAAGAGAATGGGATTCAGTTGCTTGCGCAC
ACTCCTTTAGGCCGTCCTGCCCTTTCGCGGCCTCCCGGGAGCAACCCTCT
GAGAGAGCCATTGGTTGAAATGTCGGCCACGGCGCTCGAATGCAGCCCGG
CTCAAGTGGTTCTACGGTGGGCGGTGCAACAAGGCGTGGCCGTTGTGCCC
AACTCTTTGAGTAGGTCTCATATATTAGAGAATTCTAATCTACATACCTT
TACGTTAGCTCCTTTTCGAGTGGACGTGCTGCGGGACATGGCTGCTATTC
GAAACTTGCGTTTTGCCGACCCTATGATTACGGCTACTGCATCTGGAAGG
ATGATGACACCGCCTTATTCTTTGGAAGATGTACGAAGGCACGGTTTAGT
GTACGGGGATGATGGCGCGATTATTCCACCCGGGAGTGCTTACAAGTATA
TGGAATTGACGGTGGAGGTATTTGAGCGGTTGGATTTGGGGGATATGGCG
GAGCTCTTGCTGGAGCCGCGGACGATTGATGGGACTTTTCCGGGCATGGA
TGTTGAGCCGATTGAGGAGGGGGAGTAGAAGGGGAGAGGACAAGTAAAAT
TGTAGGTTTAATATGATTGAAATGAAAAGAAAGAAATGGGTAGAGCA back to topprotein sequence of NO02G03650.1 >NO02G03650.1-protein ID=NO02G03650.1-protein|Name=NO02G03650.1|organism=Nannochloropsis oceanica|type=polypeptide|length=766bp
MTRPLHLLLPLLLFLLSSVFPMNRAFYPRPRVGGLSISSSSPTLPRSSST
QLRSDVFFNFEGLKRRLNLTHFSNPDLEPPPSLAPLQEEDYINRPDLVKA
REIAKALNTELTAPGNYPSVALYFHVAAHHLQSFREALQDFIQAQQHREK
NGDVFWEAFQLIGLPAELEYTPYPGSQAGRVPSRSRVCLCGTFATQQAEE
RAKHDVMRWRSTLKSRLAAYRLLGEDENDPVETMPMSQAVYRRIRPKGPP
TQPRTSTTHPVTPSSVFLLAFLQASWSSERKIRLHLERLTRYMAEVTDPD
PFLGGPAERTELYIDPSYPSAHRVWHQFPNQAAMVKCLSGPYVEFLGEGA
KFRARVNHVEQAFAPLVGSGIEGEGKGKGELFPPTLSVVLSSCGSYMPLV
GYGTSVYRGREREGELPLGEAMRIALRAGCRLLDCSPNYGTQKEVGEVLC
QVFEAHETTRERVFIVSSLSWEVVVQTGGDRDEIKADVRKTFQELNVEYL
DLLLLPYVVGSDDENERHASLWRAMEALVEEGLVRHLGVGGFPLESLKAL
QSDPTIACQPVVCQLEHHPFYRDETLVEYCEENGIQLLAHTPLGRPALSR
PPGSNPLREPLVEMSATALECSPAQVVLRWAVQQGVAVVPNSLSRSHILE
NSNLHTFTLAPFRVDVLRDMAAIRNLRFADPMITATASGRMMTPPYSLED
VRRHGLVYGDDGAIIPPGSAYKYMELTVEVFERLDLGDMAELLLEPRTID
GTFPGMDVEPIEEGE* back to topmRNA from alignment at chr2:979256..981652+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO02G03650.1 ID=NO02G03650.1|Name=NO02G03650.1|organism=Nannochloropsis oceanica|type=mRNA|length=2397bp|location=Sequence derived from alignment at chr2:979256..981652+ (Nannochloropsis oceanica)
ACAGCTCCCCTGCCTCATGTTCCTCCCACCATGACTCGCCCGCTGCATCT
CCTCCTCCCCCTCCTCCTCTTCCTCCTCTCCTCCGTCTTTCCTATGAACC
GGGCATTCTACCCCCGTCCCCGGGTCGGTGGCTTATCCATCTCCTCGTCT
TCGCCGACATTACCACGATCGTCCTCCACACAGCTGCGCTCGGATGTCTT
CTTCAATTTTGAGGGCCTCAAGCGACGGCTAAATCTAACCCACTTTAGCA
ACCCGGATTTGGAGCCTCCTCCATCATTGGCACCGCTCCAGGAAGAGGAC
TACATAAATCGTCCTGACCTTGTCAAGGCCAGGGAGATTGCCAAGGCTCT
CAATACTGAACTGACGGCGCCCGGCAACTACCCCAGCGTCGCCCTCTACT
TTCATGTGGCCGCCCACCATCTGCAGAGTTTTCGAGAGGCCCTTCAAGAC
TTTATTCAGGCGCAACAACACAGGGAAAAGAATGGCGATGTCTTCTGGGA
GGCATTCCAGTTGATAGGGCTACCTGCCGAATTGGAATACACACCTTACC
CCGGCAGTCAAGCAGGCCGCGTCCCCTCTCGCTCCCGTGTTTGCTTGTGT
GGGACCTTTGCGACTCAGCAGGCCGAGGAACGGGCCAAACATGATGTGAT
GAGATGGCGATCTACCCTAAAATCTCGATTGGCGGCCTACCGTCTCCTGG
GGGAGGATGAGAACGATCCCGTGGAGACCATGCCCATGAGTCAAGCCGTC
TACAGGCGCATCCGACCCAAAGGCCCTCCCACACAGCCTCGAACCTCCAC
CACCCACCCTGTAACCCCATCTTCCGTCTTTTTACTCGCCTTTTTACAAG
CCAGCTGGTCATCAGAGCGCAAGATTCGTCTGCATCTCGAGCGTCTCACG
CGTTATATGGCCGAGGTCACTGACCCTGATCCCTTCCTAGGGGGGCCGGC
GGAACGTACGGAGCTTTACATCGATCCCTCCTACCCCAGCGCGCACCGGG
TGTGGCACCAGTTTCCTAATCAAGCTGCGATGGTGAAGTGTTTGAGTGGA
CCTTATGTGGAGTTTTTGGGGGAAGGAGCCAAATTTCGAGCAAGGGTGAA
TCATGTAGAGCAAGCCTTTGCGCCATTGGTCGGGAGCGGGATTGAGGGAG
AGGGAAAGGGGAAAGGAGAGCTTTTCCCTCCTACTCTATCTGTTGTGTTG
TCGTCTTGTGGTTCTTATATGCCCTTGGTAGGGTACGGAACAAGCGTTTA
TCGAGGGCGGGAGCGAGAGGGGGAGCTGCCACTTGGGGAAGCTATGCGAA
TTGCCTTGCGTGCAGGTTGCCGCCTCCTCGATTGCAGTCCTAATTATGGC
ACACAAAAGGAAGTAGGTGAGGTGCTATGCCAAGTATTTGAGGCCCATGA
AACAACGCGGGAGCGGGTGTTCATCGTGAGCAGTTTGAGTTGGGAGGTGG
TGGTGCAGACAGGCGGAGATAGGGACGAAATTAAGGCAGACGTGAGGAAA
ACATTCCAGGAGCTCAATGTCGAATACTTAGACCTTTTGCTGCTGCCGTA
CGTAGTAGGGAGCGACGACGAGAACGAGAGGCATGCGTCGTTGTGGAGGG
CTATGGAGGCGTTGGTGGAGGAAGGGCTGGTGCGTCATTTAGGCGTGGGA
GGGTTTCCTCTTGAAAGTCTGAAGGCGCTGCAGAGCGACCCTACCATCGC
CTGCCAGCCGGTGGTCTGTCAATTGGAGCACCATCCTTTTTACCGTGACG
AGACTTTGGTGGAGTACTGTGAAGAGAATGGGATTCAGTTGCTTGCGCAC
ACTCCTTTAGGCCGTCCTGCCCTTTCGCGGCCTCCCGGGAGCAACCCTCT
GAGAGAGCCATTGGTTGAAATGTCGGCCACGGCGCTCGAATGCAGCCCGG
CTCAAGTGGTTCTACGGTGGGCGGTGCAACAAGGCGTGGCCGTTGTGCCC
AACTCTTTGAGTAGGTCTCATATATTAGAGAATTCTAATCTACATACCTT
TACGTTAGCTCCTTTTCGAGTGGACGTGCTGCGGGACATGGCTGCTATTC
GAAACTTGCGTTTTGCCGACCCTATGATTACGGCTACTGCATCTGGAAGG
ATGATGACACCGCCTTATTCTTTGGAAGATGTACGAAGGCACGGTTTAGT
GTACGGGGATGATGGCGCGATTATTCCACCCGGGAGTGCTTACAAGTATA
TGGAATTGACGGTGGAGGTATTTGAGCGGTTGGATTTGGGGGATATGGCG
GAGCTCTTGCTGGAGCCGCGGACGATTGATGGGACTTTTCCGGGCATGGA
TGTTGAGCCGATTGAGGAGGGGGAGTAGAAGGGGAGAGGACAAGTAAAAT
TGTAGGTTTAATATGATTGAAATGAAAAGAAAGAAATGGGTAGAGCA back to topCoding sequence (CDS) from alignment at chr2:979256..981652+ >NO02G03650.1 ID=NO02G03650.1|Name=NO02G03650.1|organism=Nannochloropsis oceanica|type=CDS|length=2298bp|location=Sequence derived from alignment at chr2:979256..981652+ (Nannochloropsis oceanica)
ATGACTCGCCCGCTGCATCTCCTCCTCCCCCTCCTCCTCTTCCTCCTCTC
CTCCGTCTTTCCTATGAACCGGGCATTCTACCCCCGTCCCCGGGTCGGTG
GCTTATCCATCTCCTCGTCTTCGCCGACATTACCACGATCGTCCTCCACA
CAGCTGCGCTCGGATGTCTTCTTCAATTTTGAGGGCCTCAAGCGACGGCT
AAATCTAACCCACTTTAGCAACCCGGATTTGGAGCCTCCTCCATCATTGG
CACCGCTCCAGGAAGAGGACTACATAAATCGTCCTGACCTTGTCAAGGCC
AGGGAGATTGCCAAGGCTCTCAATACTGAACTGACGGCGCCCGGCAACTA
CCCCAGCGTCGCCCTCTACTTTCATGTGGCCGCCCACCATCTGCAGAGTT
TTCGAGAGGCCCTTCAAGACTTTATTCAGGCGCAACAACACAGGGAAAAG
AATGGCGATGTCTTCTGGGAGGCATTCCAGTTGATAGGGCTACCTGCCGA
ATTGGAATACACACCTTACCCCGGCAGTCAAGCAGGCCGCGTCCCCTCTC
GCTCCCGTGTTTGCTTGTGTGGGACCTTTGCGACTCAGCAGGCCGAGGAA
CGGGCCAAACATGATGTGATGAGATGGCGATCTACCCTAAAATCTCGATT
GGCGGCCTACCGTCTCCTGGGGGAGGATGAGAACGATCCCGTGGAGACCA
TGCCCATGAGTCAAGCCGTCTACAGGCGCATCCGACCCAAAGGCCCTCCC
ACACAGCCTCGAACCTCCACCACCCACCCTGTAACCCCATCTTCCGTCTT
TTTACTCGCCTTTTTACAAGCCAGCTGGTCATCAGAGCGCAAGATTCGTC
TGCATCTCGAGCGTCTCACGCGTTATATGGCCGAGGTCACTGACCCTGAT
CCCTTCCTAGGGGGGCCGGCGGAACGTACGGAGCTTTACATCGATCCCTC
CTACCCCAGCGCGCACCGGGTGTGGCACCAGTTTCCTAATCAAGCTGCGA
TGGTGAAGTGTTTGAGTGGACCTTATGTGGAGTTTTTGGGGGAAGGAGCC
AAATTTCGAGCAAGGGTGAATCATGTAGAGCAAGCCTTTGCGCCATTGGT
CGGGAGCGGGATTGAGGGAGAGGGAAAGGGGAAAGGAGAGCTTTTCCCTC
CTACTCTATCTGTTGTGTTGTCGTCTTGTGGTTCTTATATGCCCTTGGTA
GGGTACGGAACAAGCGTTTATCGAGGGCGGGAGCGAGAGGGGGAGCTGCC
ACTTGGGGAAGCTATGCGAATTGCCTTGCGTGCAGGTTGCCGCCTCCTCG
ATTGCAGTCCTAATTATGGCACACAAAAGGAAGTAGGTGAGGTGCTATGC
CAAGTATTTGAGGCCCATGAAACAACGCGGGAGCGGGTGTTCATCGTGAG
CAGTTTGAGTTGGGAGGTGGTGGTGCAGACAGGCGGAGATAGGGACGAAA
TTAAGGCAGACGTGAGGAAAACATTCCAGGAGCTCAATGTCGAATACTTA
GACCTTTTGCTGCTGCCGTACGTAGTAGGGAGCGACGACGAGAACGAGAG
GCATGCGTCGTTGTGGAGGGCTATGGAGGCGTTGGTGGAGGAAGGGCTGG
TGCGTCATTTAGGCGTGGGAGGGTTTCCTCTTGAAAGTCTGAAGGCGCTG
CAGAGCGACCCTACCATCGCCTGCCAGCCGGTGGTCTGTCAATTGGAGCA
CCATCCTTTTTACCGTGACGAGACTTTGGTGGAGTACTGTGAAGAGAATG
GGATTCAGTTGCTTGCGCACACTCCTTTAGGCCGTCCTGCCCTTTCGCGG
CCTCCCGGGAGCAACCCTCTGAGAGAGCCATTGGTTGAAATGTCGGCCAC
GGCGCTCGAATGCAGCCCGGCTCAAGTGGTTCTACGGTGGGCGGTGCAAC
AAGGCGTGGCCGTTGTGCCCAACTCTTTGAGTAGGTCTCATATATTAGAG
AATTCTAATCTACATACCTTTACGTTAGCTCCTTTTCGAGTGGACGTGCT
GCGGGACATGGCTGCTATTCGAAACTTGCGTTTTGCCGACCCTATGATTA
CGGCTACTGCATCTGGAAGGATGATGACACCGCCTTATTCTTTGGAAGAT
GTACGAAGGCACGGTTTAGTGTACGGGGATGATGGCGCGATTATTCCACC
CGGGAGTGCTTACAAGTATATGGAATTGACGGTGGAGGTATTTGAGCGGT
TGGATTTGGGGGATATGGCGGAGCTCTTGCTGGAGCCGCGGACGATTGAT
GGGACTTTTCCGGGCATGGATGTTGAGCCGATTGAGGAGGGGGAGTAG back to top
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