NO02G03350.1, NO02G03350.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO02G03350.1
Unique NameNO02G03350.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2554
Alignment locationchr2:898946..902269 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:898946..902269 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G03350.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G03350NO02G03350Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO02G03350.1NO02G03350.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO02G03350.1.cds1NO02G03350.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G03350.1.cds2NO02G03350.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G03350.1.cds3NO02G03350.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G03350.1.cds4NO02G03350.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO02G03350.1 ID=NO02G03350.1|Name=NO02G03350.1|organism=Nannochloropsis oceanica|type=mRNA|length=2554bp
ATGAGGTGGCCACCAGCTGCAGGAGGAGGAGGAGGAGGGGGAAGGGATAG
CAGGATGGATACAGGAGGGGATCCTGGAAGGGGGGAGGTGAGGGAGGTGG
AGGAGGAGGTGGTGGAGGAGGAGGAGGGGAAGGAGGAGGTGGTGGAGGAG
GAGGAGGAGGGGAAGGAGGAGGAGGGGAAGGAGGAGGAGGAGGAGGAGGA
GAAGGAGGAGGAGGGGGGGAGGAGCAGGAGGTTGAGAAGGAGGACGAGGA
GGAGGGGAGGACGAGGAGGAGGACGAGAAGGAGGAGGGAAAGGAGGAGGA
GGAGGAGAGGGAGGAGGGGAAGGAGGAGGAGGAGGAGGAGGGGAAGGAGG
GGGAGGGGAAGGAGGAGGAGGAGGGGGAGGAAGGGGAGGGGGAGGAAGAA
GAGGGAAAAGAACCCGGGCTGCGGAAGCAGCAGCAGCCGCCCAGAGGCGG
CTGACCATACAGATGGCACTTGCTGAAGCACGAGCCCGGGCAGCTGCAGG
AGGAGGAGGAGGAGGGGGAAGGGATAGCAGGATGGATACAGGAGGGGATC
CTGGAAGGGAGGTGGAGGAGGAGGTGGTGGAGGAGGAGGAGGAGGGGAAG
GAGGAGGAGGGGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGGGGAGGACGAGGAGGAGGACGAGAAGGAGGACGAGG
AGGAGGCGGAGGCGGAGGAGGCGGAGGCGGAGGAGGCGGAGGCGGAGGAG
GCGGAGGAGGAGGCGGAGGAGGAGGAGGGGGTGGAGGCGGAGGAATTAGA
GGAGAAGGAGGCGGAGAAGAACGAGGCGGAGGCGGAGGAGGACGAGGACG
AGGCAGAGGAGGAGGTCATGGGCGGGCCATCCGAGGACTGTATTGATGTA
ACACCTGTGAACAGTTCGTGTCTCGGGACGGCAATGGGGCACGTAATATC
CTACTGGTGTACAGGAGAATGGTCCGTGGAGAAGCTCGTCCCCATGATCT
TCGGTTTGGTCAACCGCGGCAAGATCAGGCGGCAGTATAGCCCTAGCAAA
GCCATGGCATCTCAGGCGGACTGGCGAGGCGGTCACGGTCACGTTCACGG
TCGCGAAAGTCGTGGACGAGGCACTCCTTTGCCCAACGGCGCACAAAGCA
AACTATCTCTCGACTTCTTCCGATCGGCCGACCTGCACCTCAGGGACAGC
TGCACGCTATCGTTGTATGTACCCATTGAGCAGGTGGGTTTAGTGATTGG
GAAGAAGGGGGCAAAGATCAAATACATTCAAGACGCCAGCAGGGCCCGCG
TGAGCGTGGAGCCAACGGAGGACGTCACCGACTCAGCCTGGTCTCTCGTC
AGTGTCCGAGGCAAACCCTCGGGGTGCTTCACGGCGGCCCGCATGATCGC
GGGACTCGTGGAAGAGCTAGACGATTGCATCGCCCAGTTTCCCCTGTTTA
AAAGCCGTCTGGTCCAAGTCATCGGGAAGAGCAGCGCCAATCTACGTCGC
ATAAGCGCGGACACAAACGTGCGCATTTACATACCGGGTTGGAAGGACAA
AGAAAGCAATTACGTGCAGCTGGAAGGCGAGGTTGACGCCGTTTTAAAAG
CAGTGGTGGAGGTGGTTGATGCGGCATATAGTGGAGGAGGATATCGGAGC
AGCAGCAATGCGGGCGGAGACAGAGAAGGCGAGTCTGATGGCCAAGTGGC
CATGGTAGATGAAGCAACGACACCGATTGCTGCGGCTTACCCAATCACTA
GTAAAGGGGCACCAACCTCAATTATAGAGGAGATAATTCCTGTGTCTATT
AGTCAACTTGATATTTTGACGAAAGGCAGCACCAGTGCTGCAATTGTTTT
GATAAGTAAACACACAGGTACGCGGATCAAGAAGGAATCCAAGCCGCGGG
AAAAGGAGAACGGCACGGTGCCAGAGGCTGAGGAACAAGTATTTATGGAC
AAGTCGCAACCCAAGGACAAAGAGGCGGAAGAAGGGGGGTACGAGGAAGG
AGGCGGAGAGGGAGGAGGACCGAGGGTTCAAATTACGTCGTCCGTCTCGC
CTGGTAGCGCTGTTGTTGACAATGATGGAGGGGACGAGGCAGACTCAGAA
TTCATATCGTTAAGCCCCCAGACAGGTCAGCAAGGAGAACGAGAGGGGAA
TTTGATCAAGATTTGTGTGACAGGTGCTGACGAGAAGGCCGTCCTGGCAG
CCGTGGGGGCGTTGCGAGAAGTAGGAGAAGGCCAAGCATCGCTCCTCGAG
GCGATCGCACGGCTTAAAATCGAATTTCCCGCTTTCCAAAGCGGTAATGG
AGGCCGTTCCAAATCGAAGGGAGGGATAGGTAGGGTTGCTTGGAAGAGCA
GCGATGGAGGAGGGTCGAGATTGAACAAACGCGGATGAGAGAAGAGCAAC
AGGCCCAAATGTGATGGTGCCCTTATCGGCGATACAGGAAGTTGTAATTC
AACGCCTGCGCCGTCCGCGTGATGTATTGATGAATGTAGATTTTTGATTT
TTGGAAAGAAGCGACTGATAAAGTAATTATACGACCCAAAACGTGACATC
CATA
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protein sequence of NO02G03350.1

>NO02G03350.1-protein ID=NO02G03350.1-protein|Name=NO02G03350.1|organism=Nannochloropsis oceanica|type=polypeptide|length=796bp
MRWPPAAGGGGGGGRDSRMDTGGDPGRGEVREVEEEVVEEEEGKEEVVEE
EEEGKEEEGKEEEEEEEKEEEGGRSRRLRRRTRRRGGRGGGREGGGKGGG
GGEGGGEGGGGGGGEGGGGEGGGGGGGRGGGGRRGKRTRAAEAAAAAQRR
LTIQMALAEARARAAAGGGGGGGRDSRMDTGGDPGREVEEEVVEEEEEGK
EEEGKEEEEEEEEEEEEEEEEGEDEEEDEKEDEEEAEAEEAEAEEAEAEE
AEEEAEEEEGVEAEELEEKEAEKNEAEAEEDEDEAEEEVMGGPSEDCIDV
TPVNSSCLGTAMGHVISYWCTGEWSVEKLVPMIFGLVNRGKIRRQYSPSK
AMASQADWRGGHGHVHGRESRGRGTPLPNGAQSKLSLDFFRSADLHLRDS
CTLSLYVPIEQVGLVIGKKGAKIKYIQDASRARVSVEPTEDVTDSAWSLV
SVRGKPSGCFTAARMIAGLVEELDDCIAQFPLFKSRLVQVIGKSSANLRR
ISADTNVRIYIPGWKDKESNYVQLEGEVDAVLKAVVEVVDAAYSGGGYRS
SSNAGGDREGESDGQVAMVDEATTPIAAAYPITSKGAPTSIIEEIIPVSI
SQLDILTKGSTSAAIVLISKHTGTRIKKESKPREKENGTVPEAEEQVFMD
KSQPKDKEAEEGGYEEGGGEGGGPRVQITSSVSPGSAVVDNDGGDEADSE
FISLSPQTGQQGEREGNLIKICVTGADEKAVLAAVGALREVGEGQASLLE
AIARLKIEFPAFQSGNGGRSKSKGGIGRVAWKSSDGGGSRLNKRG*
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mRNA from alignment at chr2:898946..902269-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO02G03350.1 ID=NO02G03350.1|Name=NO02G03350.1|organism=Nannochloropsis oceanica|type=mRNA|length=3324bp|location=Sequence derived from alignment at chr2:898946..902269- (Nannochloropsis oceanica)
ATGAGGTGGCCACCAGCTGCAGGAGGAGGAGGAGGAGGGGGAAGGGATAG CAGGATGGATACAGGAGGGGATCCTGGAAGGGTAGGAGTGGGAGGAGTCG GGGCGGCCGGAGCGGCAACAGGAGGAGGAGAGGGAATGAGAGGAATCCCC ACTATACTCTCTTTACCCAGAGAACAGGCAGCACGAGCACTGGCAACCAT TGGTAGAATTCGTGCGGCACTTGCTGGAGGAATGGAGAAGGGAAAGAGAA AGATAGTGAGGGCGCGCCGACGAGGGGGAAGAGGGGGAGGTGAGGGAGGT GGAGGAGGAGGTGGTGGAGGAGGAGGAGGGGAAGGAGGAGGTGGTGGAGG AGGAGGAGGAGGGGAAGGAGGAGGAGGGGAAGGAGGAGGAGGAGGAGGAG GAGAAGGAGGAGGAGGGGGGGAGGAGCAGGAGGTTGAGAAGGAGGACGAG GAGGAGGGGAGGACGAGGAGGAGGACGAGAAGGAGGAGGGAAAGGAGGAG GAGGAGGAGAGGGAGGAGGGGAAGGAGGAGGAGGAGGAGGAGGGGAAGGA GGGGGAGGGGAAGGAGGAGGAGGAGGGGGAGGAAGGGGAGGGGGAGGAAG AAGAGGGAAAAGAACCCGGGCTGCGGAAGCAGCAGCAGCCGCCCAGAGGC GGCTGACCATACAGATGGCACTTGCTGAAGCACGAGCCCGGGCAGCTGCA GGAGGAGGAGGAGGAGGGGGAAGGGATAGCAGGATGGATACAGGAGGGGA TCCTGGAAGGGTAGGAGTGGGAGGAGTCGGGGCGGCCGGAGCGGCAACAG GAGGAGGAGGAGAGGGAATGAGAGGAATCCCCACTATACTCTCTTTACCC AGAGAACAGGCAGCACGAGCACTGGCAACCATTGGTAGAATTCGTGCGGC ACTTGCTGGAGGAATGGAGAAGGGAAAGAGAAAGATAGTGAGGGCGCGCC GACGAGGGGGAGGAGGGGGAGGTGAAGGAGGTGGAGGAGGAGGTGGTGGA GGAGGAGGAGGAGGGGAAGGAGGAGGAGGGGAAGGAGGAGGAGGAGGAGG AGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGGGAGGACGAGGAGGAG GACGAGAAGGAGGACGAGGAGGAGGCGGAGGCGGAGGAGGCGGAGGCGGA GGAGGCGGAGGCGGAGGAGGCGGAGGAGGAGGCGGAGGAGGAGGAGGGGG TGGAGGCGGAGGAATTAGAGGAGAAGGAGGCGGAGAAGAACGAGGCGGAG GCGGAGGAGGACGAGGACGAGGCAGAGGAGGAGGTCATGGGCGGGCCATC CGAGGACTGTATTGATGTAACACCTGTGAACAGTTCGTGTCTCGGGACGG CAATGGGGCACGTAATATCCTACTGGTGTACAGGAGAATGGTCCGTGGAG AAGCTCGTCCCCATGATCTTCGGTTTGGTCAACCGCGGCAAGATGTGCGG ACACTCTATGTGTAGCCTTCCCGCTGACCTCCTCTTTTATCTTCCTCCCC CTTCTCCTCCTGGCCCTGTGTGGGCCGTCCGGGGACTTTGCCAGGTCGAA AAACCTATCAAAGTCGCTAGAAAAACTCGGACGAGGAATAAGGGATGACA ACAATTTCTTGTTGGAAGGCTCCCCCTCGTATGCAAGTCCTCGAAGACGT CAGGTTGCATGCGATAGTTCTAGAGAGATGTAGGAACGCTCAAAAGAACT ACGTCGTCTGTTTTTTTTCGTTTTTTCGTTTTTCGTTTATTAATATATTA TTATTGGTTTATATATTTTTTTGTCTTTCCAACCAATCTACACAGCAGGC GGCAGTATAGCCCTAGCAAAGCCATGGCATCTCAGGCGGACTGGCGAGGC GGTCACGGTCACGTTCACGGTCGCGAAAGTCGTGGACGAGGCACTCCTTT GCCCAACGGCGCACAAAGCAAACTATCTCTCGACTTCTTCCGATCGGCCG ACCTGCACCTCAGGGACAGCTGCACGCTATCGTTGTATGTACCCATTGAG CAGGTGGGTTTAGTGATTGGGAAGAAGGGGGCAAAGATCAAATACATTCA AGACGCCAGCAGGGCCCGCGTGAGCGTGGAGCCAACGGAGGACGTCACCG ACTCAGCCTGGTCTCTCGTCAGTGTCCGAGGCAAACCCTCGGGGTGCTTC ACGGCGGCCCGCATGATCGCGGGACTCGTGGAAGAGCTAGACGATTGCAT CGCCCAGTTTCCCCTGTTTAAAAGCCGTCTGGTCCAAGTCATCGGGAAGA GCAGCGCCAATCTACGTCGCATAAGCGCGGACACAAACGTGCGCATTTAC ATACCGGGTTGGAAGGACAAAGAAAGCAATTACGTGCAGCTGGAAGGCGA GGTTGACGCCGTTTTAAAAGCAGTGGTGGAGGTGGTTGATGCGGCATATA GTGGAGGAGGATATCGGAGCAGCAGCAATGCGGGCGGAGACAGAGAAGGC GAGTCTGATGGCCAAGTGGCCATGGTAGATGAAGCAACGACACCGATTGC TGCGGCTTACCCAATCACTAGTAAAGGGGCACCAACCTCAATTATAGAGG AGATAATTCCTGTGTCTATTAGTCAACTTGATATTTTGACGAAAGGCAGC ACCAGTGCTGCAATTGTTTTGATAAGTAAACACACAGGTACGCGGATCAA GAAGGAATCCAAGCCGCGGGAAAAGGAGAACGGCACGGTGCCAGAGGCTG AGGAACAAGTATTTATGGACAAGTCGCAACCCAAGGACAAAGAGGCGGAA GAAGGGGGGTACGAGGAAGGAGGCGGAGAGGGAGGAGGACCGAGGGTTCA AATTACGTCGTCCGTCTCGCCTGGTAGCGCTGTTGTTGACAATGATGGAG GGGACGAGGCAGACTCAGAATTCATATCGTTAAGCCCCCAGACAGGTCAG CAAGGAGAACGAGAGGGGAATTTGATCAAGATTTGTGTGACAGGTGCTGA CGAGAAGGCCGTCCTGGCAGCCGTGGGGGCGTTGCGAGAAGTAGGAGAAG GCCAAGCATCGCTCCTCGAGGCGATCGCACGGCTTAAAATCGAATTTCCC GCTTTCCAAAGCGGTAATGGAGGCCGTTCCAAATCGAAGGGAGGGATAGG TAGGGTTGCTTGGAAGAGCAGCGATGGAGGAGGGTCGAGATTGAACAAAC GCGGATGAGAGAAGAGCAACAGGCCCAAATGTGATGGTGCCCTTATCGGC GATACAGGAAGTTGTAATTCAACGCCTGCGCCGTCCGCGTGATGTATTGA TGAATGTAGATTTTTGATTTTTGGAAAGAAGCGACTGATAAAGTAATTAT ACGACCCAAAACGTGACATCCATA
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Coding sequence (CDS) from alignment at chr2:898946..902269-

>NO02G03350.1 ID=NO02G03350.1|Name=NO02G03350.1|organism=Nannochloropsis oceanica|type=CDS|length=2388bp|location=Sequence derived from alignment at chr2:898946..902269- (Nannochloropsis oceanica)
ATGAGGTGGCCACCAGCTGCAGGAGGAGGAGGAGGAGGGGGAAGGGATAG
CAGGATGGATACAGGAGGGGATCCTGGAAGGGGGGAGGTGAGGGAGGTGG
AGGAGGAGGTGGTGGAGGAGGAGGAGGGGAAGGAGGAGGTGGTGGAGGAG
GAGGAGGAGGGGAAGGAGGAGGAGGGGAAGGAGGAGGAGGAGGAGGAGGA
GAAGGAGGAGGAGGGGGGGAGGAGCAGGAGGTTGAGAAGGAGGACGAGGA
GGAGGGGAGGACGAGGAGGAGGACGAGAAGGAGGAGGGAAAGGAGGAGGA
GGAGGAGAGGGAGGAGGGGAAGGAGGAGGAGGAGGAGGAGGGGAAGGAGG
GGGAGGGGAAGGAGGAGGAGGAGGGGGAGGAAGGGGAGGGGGAGGAAGAA
GAGGGAAAAGAACCCGGGCTGCGGAAGCAGCAGCAGCCGCCCAGAGGCGG
CTGACCATACAGATGGCACTTGCTGAAGCACGAGCCCGGGCAGCTGCAGG
AGGAGGAGGAGGAGGGGGAAGGGATAGCAGGATGGATACAGGAGGGGATC
CTGGAAGGGAGGTGGAGGAGGAGGTGGTGGAGGAGGAGGAGGAGGGGAAG
GAGGAGGAGGGGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGA
GGAGGAGGAGGAGGGGGAGGACGAGGAGGAGGACGAGAAGGAGGACGAGG
AGGAGGCGGAGGCGGAGGAGGCGGAGGCGGAGGAGGCGGAGGCGGAGGAG
GCGGAGGAGGAGGCGGAGGAGGAGGAGGGGGTGGAGGCGGAGGAATTAGA
GGAGAAGGAGGCGGAGAAGAACGAGGCGGAGGCGGAGGAGGACGAGGACG
AGGCAGAGGAGGAGGTCATGGGCGGGCCATCCGAGGACTGTATTGATGTA
ACACCTGTGAACAGTTCGTGTCTCGGGACGGCAATGGGGCACGTAATATC
CTACTGGTGTACAGGAGAATGGTCCGTGGAGAAGCTCGTCCCCATGATCT
TCGGTTTGGTCAACCGCGGCAAGATCAGGCGGCAGTATAGCCCTAGCAAA
GCCATGGCATCTCAGGCGGACTGGCGAGGCGGTCACGGTCACGTTCACGG
TCGCGAAAGTCGTGGACGAGGCACTCCTTTGCCCAACGGCGCACAAAGCA
AACTATCTCTCGACTTCTTCCGATCGGCCGACCTGCACCTCAGGGACAGC
TGCACGCTATCGTTGTATGTACCCATTGAGCAGGTGGGTTTAGTGATTGG
GAAGAAGGGGGCAAAGATCAAATACATTCAAGACGCCAGCAGGGCCCGCG
TGAGCGTGGAGCCAACGGAGGACGTCACCGACTCAGCCTGGTCTCTCGTC
AGTGTCCGAGGCAAACCCTCGGGGTGCTTCACGGCGGCCCGCATGATCGC
GGGACTCGTGGAAGAGCTAGACGATTGCATCGCCCAGTTTCCCCTGTTTA
AAAGCCGTCTGGTCCAAGTCATCGGGAAGAGCAGCGCCAATCTACGTCGC
ATAAGCGCGGACACAAACGTGCGCATTTACATACCGGGTTGGAAGGACAA
AGAAAGCAATTACGTGCAGCTGGAAGGCGAGGTTGACGCCGTTTTAAAAG
CAGTGGTGGAGGTGGTTGATGCGGCATATAGTGGAGGAGGATATCGGAGC
AGCAGCAATGCGGGCGGAGACAGAGAAGGCGAGTCTGATGGCCAAGTGGC
CATGGTAGATGAAGCAACGACACCGATTGCTGCGGCTTACCCAATCACTA
GTAAAGGGGCACCAACCTCAATTATAGAGGAGATAATTCCTGTGTCTATT
AGTCAACTTGATATTTTGACGAAAGGCAGCACCAGTGCTGCAATTGTTTT
GATAAGTAAACACACAGGTACGCGGATCAAGAAGGAATCCAAGCCGCGGG
AAAAGGAGAACGGCACGGTGCCAGAGGCTGAGGAACAAGTATTTATGGAC
AAGTCGCAACCCAAGGACAAAGAGGCGGAAGAAGGGGGGTACGAGGAAGG
AGGCGGAGAGGGAGGAGGACCGAGGGTTCAAATTACGTCGTCCGTCTCGC
CTGGTAGCGCTGTTGTTGACAATGATGGAGGGGACGAGGCAGACTCAGAA
TTCATATCGTTAAGCCCCCAGACAGGTCAGCAAGGAGAACGAGAGGGGAA
TTTGATCAAGATTTGTGTGACAGGTGCTGACGAGAAGGCCGTCCTGGCAG
CCGTGGGGGCGTTGCGAGAAGTAGGAGAAGGCCAAGCATCGCTCCTCGAG
GCGATCGCACGGCTTAAAATCGAATTTCCCGCTTTCCAAAGCGGTAATGG
AGGCCGTTCCAAATCGAAGGGAGGGATAGGTAGGGTTGCTTGGAAGAGCA
GCGATGGAGGAGGGTCGAGATTGAACAAACGCGGATGA
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Synonyms
Publications