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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr2 | genome | chr2:834364..836847 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO02G03110.1 vs.
Match: EWM30206.1 (peroxisomal glycolate oxidase [Nannochloropsis gaditana]) HSP 1 Score: 724.5 bits (1869), Expect = 1.900e-205 Identity = 363/391 (92.84%), Postives = 375/391 (95.91%), Query Frame = 0
Query: 49 MDIVNRPLGAAEETVMTPTGAGPEPVNIREYEAYAKATLPKNAFDYYASGANDMITLRENRAAFERLRMRPRILRDVSEVDTATTILGEPVAYPICVAPTAMQRMANHEGELATARACARQKTLMTLSSWSTTSVEDVAAVGVGAAKWFQLYVYKDRELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLPGHLTMANFASEGGSHAEGTKDGGKDSGLAAYVASLIDRTLQWKDVQWLRSVCNLPIVVKGVMTPEDALMAMQCGVDAIWVSNHGARQLDTVASTIELLPDIVKAVNGRCEVYLDGGVCRGTDAFKALALGARAVFIGRPVLWGLAHSGEEGVYQVLELLKKEFEMAMRLTGCTKLSDIQRAMVTHVASYQSKI 440
MD VN P+GAAEETV TPTGAGPEPVNIRE+EAYAKATLPKNAFDYYASGANDMITLRENRAAFERLRMRPRILRDVS VDT TT+LG+PVA+PICVAPTAMQRMA+ EGELATARACARQ+TLMTLSSWSTTSVEDVAA KWFQLYVYKDRELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLP HLTMANFA GGSHAEGTKDGGKDSGLAAYVASLIDRTLQWKDVQWLRS+CNLPIVVKGVMTPEDAL+AMQCGVDAIWVSNHGARQLDTVASTIELLPDIVKAVNGRCEVYLDGGVCRGTDAFKALALGARAVFIGRPVLWGLAHSGE+GVYQVLELLKKEFEMAM+LTGCTKLSDIQR+MVTHV SYQSKI
Sbjct: 1 MDFVNHPMGAAEETVRTPTGAGPEPVNIREFEAYAKATLPKNAFDYYASGANDMITLRENRAAFERLRMRPRILRDVSHVDTRTTVLGDPVAFPICVAPTAMQRMASPEGELATARACARQQTLMTLSSWSTTSVEDVAAAAP-IPKWFQLYVYKDRELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLPAHLTMANFAGAGGSHAEGTKDGGKDSGLAAYVASLIDRTLQWKDVQWLRSICNLPIVVKGVMTPEDALVAMQCGVDAIWVSNHGARQLDTVASTIELLPDIVKAVNGRCEVYLDGGVCRGTDAFKALALGARAVFIGRPVLWGLAHSGEDGVYQVLELLKKEFEMAMQLTGCTKLSDIQRSMVTHVVSYQSKI 390
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO02G03110.1 ID=NO02G03110.1|Name=NO02G03110.1|organism=Nannochloropsis oceanica|type=mRNA|length=2484bp
GTGGTCCCATGCAGCGAACAACGGGTGTCGGCCCGCTGGCGTCAGGTGAT
CAGCGAACTTCGAAGCAAGCCAGATCCAAACTCTGTGAGAGTACACCCGG
TCTCGGTGAAGATCTTCGAAGCAGACTTCTCTTGCTTGGCATACGTAGCC
GCCTATATGATGTCTTTTGGATTGAAGGCCTGCGCAGCAACCCATTACAA
CGCGGCAGCCGCCGTGCGCTTGCTGACAACGTCCAAGCAAAAGAAGCTCG
ACCTCCCCCCACTCTTGCACCCAGCAACACCCACCCCTCCTCGCAGTCAC
AGCAAGCAAGCCACACTAGCGACAAGGCAAGCAACAGTATGCTCCGACCC
ACAGACATTCACGCTGTGATGTCTGGTGCATTATTTGTATCTCCGGCTGT
TGGCAAGGAGAATGCGATCTGGCTTGCCTTCCAAAAAACTTGCACGACAC
GCGAAAATGATCTTTCATCGCGCCGTCCTCTCATTATCCCTTCGCACTCT
CCCTACCCTCATCCCCCACTTCAAATCCACAGGGCTTAGCTACAGTAACC
AAAAAATGGACATTGTAAACCGCCCTTTGGGCGCGGCCGAGGAGACCGTC
ATGACGCCCACGGGCGCAGGACCGGAGCCGGTCAACATCAGAGAGTACGA
GGCGTATGCGAAAGCGACTCTTCCGAAAAACGCGTTTGACTACTACGCCA
GCGGGGCGAACGACATGATCACCCTCCGCGAGAACCGAGCGGCATTTGAA
CGCTTGCGTATGCGCCCTCGCATCTTGCGGGACGTGAGCGAGGTTGACAC
CGCCACCACCATATTGGGGGAGCCAGTGGCTTACCCCATTTGCGTGGCGC
CTACCGCCATGCAGCGTATGGCCAACCATGAGGGTGAACTTGCCACTGCA
CGTGCTTGTGCCCGGCAGAAAACTCTCATGACCTTGTCTTCCTGGTCGAC
GACGTCCGTTGAAGACGTGGCGGCGGTTGGGGTGGGAGCGGCTAAGTGGT
TCCAGCTCTACGTCTACAAGGATCGCGAGCTGACGGCCGAGCTAGCTCGA
CGAGCGGAGCGAGCGGGGTACAAAGCCTTGGCGATCACAGTGGACACACC
TGTATTGGGTAGACGGGAGGCGGACGTACGAAATCGCTTCAAGCTGCCTG
GGCACTTAACGATGGCAAATTTTGCGAGCGAGGGAGGGTCGCATGCGGAA
GGCACCAAGGACGGAGGGAAGGACTCGGGATTGGCGGCGTATGTGGCGTC
ACTCATTGATCGAACGCTCCAGTGGAAGGATGTACAATGGCTGCGCAGCG
TATGCAACCTACCAATCGTGGTCAAGGGTGTCATGACACCCGAGGACGCC
CTCATGGCGATGCAGTGTGGGGTGGACGCCATCTGGGTCTCCAACCACGG
CGCCCGTCAGCTCGACACGGTGGCTTCCACCATTGAGCTTCTTCCTGATA
TAGTCAAGGCTGTCAACGGTCGCTGCGAGGTGTATCTGGATGGCGGTGTG
TGCCGCGGGACGGATGCATTCAAGGCCCTGGCATTGGGAGCACGTGCTGT
TTTTATTGGCCGGCCGGTGCTTTGGGGCTTGGCGCACAGCGGGGAAGAAG
GCGTGTACCAGGTGTTGGAGTTGTTGAAGAAAGAGTTTGAGATGGCGATG
CGGTTAACGGGGTGCACCAAGCTCTCGGACATCCAGCGAGCGATGGTCAC
GCACGTGGCCTCGTACCAGTCAAAGATCTAATGCACGAAAATATGTGTTG
AGGGCAAAAGAGAGAGCGCAAGTAGATAGCCTGGCAAGAGCGCACGAATA
GAGGGGGGGGGAAACGTGGAGATGAACAGTCGTATAGGAAAGAAACAGGG
CAGAAGGATGGAAGAAGCAGAGAACATAAAAAAGAAAGAACACTCAGCAG
CTGGCGGTTGAAAGGACAAGAGGAAAAATATGGCAGAAGGGAAAAAGCAC
TTTATGAGTGAGTTGGTAGCTCCTCACCTTCAGATGAGGCTCTTAGGAAC
GGACAGATTGATGATTGGAACAAAATCCCCTGGGCGTCCGTGTCCGGGAG
GAAGACAGCAGGAGGAAGAAAGGAGGATGACGAGCTTTATATACATTGTG
TTTGTCATCCACTGCGATATTGGAGCGTCAAGTGTGATTGTGCGCAAGGA
TTAGAAGCGTACAATACGGGAGAAAGAATAGAAAGGAGTTGTTGTGGAGT
AGGTGCAGAGAAAAAGGCCAGATAAGTGAATGGATGTCATGTTTGTAAGT
TCTGTGTGCGTGTATGTGCGCGTACGTGCACGCGCCCGCGTTCTGGTATT
TCCCCTTTTTTTAATCTATATAAATTTATCATTATCCTAGTGGTCTACGC
ACCAAAACCTGTGTGTAAGACCAAGTTCAACAGAGGATGAAGGGCTACTA
CGGGTCCATTGGTCGGAGATGAATAAAAACACACATGTGAGCACATGACG
TACGAGAACCATTTTGTCAAGCATTGTGTTGCTT back to topprotein sequence of NO02G03110.1 >NO02G03110.1-protein ID=NO02G03110.1-protein|Name=NO02G03110.1|organism=Nannochloropsis oceanica|type=polypeptide|length=440bp
MRSGLPSKKLARHAKMIFHRAVLSLSLRTLPTLIPHFKSTGLSYSNQKMD
IVNRPLGAAEETVMTPTGAGPEPVNIREYEAYAKATLPKNAFDYYASGAN
DMITLRENRAAFERLRMRPRILRDVSEVDTATTILGEPVAYPICVAPTAM
QRMANHEGELATARACARQKTLMTLSSWSTTSVEDVAAVGVGAAKWFQLY
VYKDRELTAELARRAERAGYKALAITVDTPVLGRREADVRNRFKLPGHLT
MANFASEGGSHAEGTKDGGKDSGLAAYVASLIDRTLQWKDVQWLRSVCNL
PIVVKGVMTPEDALMAMQCGVDAIWVSNHGARQLDTVASTIELLPDIVKA
VNGRCEVYLDGGVCRGTDAFKALALGARAVFIGRPVLWGLAHSGEEGVYQ
VLELLKKEFEMAMRLTGCTKLSDIQRAMVTHVASYQSKI* back to topmRNA from alignment at chr2:834364..836847- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO02G03110.1 ID=NO02G03110.1|Name=NO02G03110.1|organism=Nannochloropsis oceanica|type=mRNA|length=2484bp|location=Sequence derived from alignment at chr2:834364..836847- (Nannochloropsis oceanica)
GTGGTCCCATGCAGCGAACAACGGGTGTCGGCCCGCTGGCGTCAGGTGAT
CAGCGAACTTCGAAGCAAGCCAGATCCAAACTCTGTGAGAGTACACCCGG
TCTCGGTGAAGATCTTCGAAGCAGACTTCTCTTGCTTGGCATACGTAGCC
GCCTATATGATGTCTTTTGGATTGAAGGCCTGCGCAGCAACCCATTACAA
CGCGGCAGCCGCCGTGCGCTTGCTGACAACGTCCAAGCAAAAGAAGCTCG
ACCTCCCCCCACTCTTGCACCCAGCAACACCCACCCCTCCTCGCAGTCAC
AGCAAGCAAGCCACACTAGCGACAAGGCAAGCAACAGTATGCTCCGACCC
ACAGACATTCACGCTGTGATGTCTGGTGCATTATTTGTATCTCCGGCTGT
TGGCAAGGAGAATGCGATCTGGCTTGCCTTCCAAAAAACTTGCACGACAC
GCGAAAATGATCTTTCATCGCGCCGTCCTCTCATTATCCCTTCGCACTCT
CCCTACCCTCATCCCCCACTTCAAATCCACAGGGCTTAGCTACAGTAACC
AAAAAATGGACATTGTAAACCGCCCTTTGGGCGCGGCCGAGGAGACCGTC
ATGACGCCCACGGGCGCAGGACCGGAGCCGGTCAACATCAGAGAGTACGA
GGCGTATGCGAAAGCGACTCTTCCGAAAAACGCGTTTGACTACTACGCCA
GCGGGGCGAACGACATGATCACCCTCCGCGAGAACCGAGCGGCATTTGAA
CGCTTGCGTATGCGCCCTCGCATCTTGCGGGACGTGAGCGAGGTTGACAC
CGCCACCACCATATTGGGGGAGCCAGTGGCTTACCCCATTTGCGTGGCGC
CTACCGCCATGCAGCGTATGGCCAACCATGAGGGTGAACTTGCCACTGCA
CGTGCTTGTGCCCGGCAGAAAACTCTCATGACCTTGTCTTCCTGGTCGAC
GACGTCCGTTGAAGACGTGGCGGCGGTTGGGGTGGGAGCGGCTAAGTGGT
TCCAGCTCTACGTCTACAAGGATCGCGAGCTGACGGCCGAGCTAGCTCGA
CGAGCGGAGCGAGCGGGGTACAAAGCCTTGGCGATCACAGTGGACACACC
TGTATTGGGTAGACGGGAGGCGGACGTACGAAATCGCTTCAAGCTGCCTG
GGCACTTAACGATGGCAAATTTTGCGAGCGAGGGAGGGTCGCATGCGGAA
GGCACCAAGGACGGAGGGAAGGACTCGGGATTGGCGGCGTATGTGGCGTC
ACTCATTGATCGAACGCTCCAGTGGAAGGATGTACAATGGCTGCGCAGCG
TATGCAACCTACCAATCGTGGTCAAGGGTGTCATGACACCCGAGGACGCC
CTCATGGCGATGCAGTGTGGGGTGGACGCCATCTGGGTCTCCAACCACGG
CGCCCGTCAGCTCGACACGGTGGCTTCCACCATTGAGCTTCTTCCTGATA
TAGTCAAGGCTGTCAACGGTCGCTGCGAGGTGTATCTGGATGGCGGTGTG
TGCCGCGGGACGGATGCATTCAAGGCCCTGGCATTGGGAGCACGTGCTGT
TTTTATTGGCCGGCCGGTGCTTTGGGGCTTGGCGCACAGCGGGGAAGAAG
GCGTGTACCAGGTGTTGGAGTTGTTGAAGAAAGAGTTTGAGATGGCGATG
CGGTTAACGGGGTGCACCAAGCTCTCGGACATCCAGCGAGCGATGGTCAC
GCACGTGGCCTCGTACCAGTCAAAGATCTAATGCACGAAAATATGTGTTG
AGGGCAAAAGAGAGAGCGCAAGTAGATAGCCTGGCAAGAGCGCACGAATA
GAGGGGGGGGGAAACGTGGAGATGAACAGTCGTATAGGAAAGAAACAGGG
CAGAAGGATGGAAGAAGCAGAGAACATAAAAAAGAAAGAACACTCAGCAG
CTGGCGGTTGAAAGGACAAGAGGAAAAATATGGCAGAAGGGAAAAAGCAC
TTTATGAGTGAGTTGGTAGCTCCTCACCTTCAGATGAGGCTCTTAGGAAC
GGACAGATTGATGATTGGAACAAAATCCCCTGGGCGTCCGTGTCCGGGAG
GAAGACAGCAGGAGGAAGAAAGGAGGATGACGAGCTTTATATACATTGTG
TTTGTCATCCACTGCGATATTGGAGCGTCAAGTGTGATTGTGCGCAAGGA
TTAGAAGCGTACAATACGGGAGAAAGAATAGAAAGGAGTTGTTGTGGAGT
AGGTGCAGAGAAAAAGGCCAGATAAGTGAATGGATGTCATGTTTGTAAGT
TCTGTGTGCGTGTATGTGCGCGTACGTGCACGCGCCCGCGTTCTGGTATT
TCCCCTTTTTTTAATCTATATAAATTTATCATTATCCTAGTGGTCTACGC
ACCAAAACCTGTGTGTAAGACCAAGTTCAACAGAGGATGAAGGGCTACTA
CGGGTCCATTGGTCGGAGATGAATAAAAACACACATGTGAGCACATGACG
TACGAGAACCATTTTGTCAAGCATTGTGTTGCTT back to topCoding sequence (CDS) from alignment at chr2:834364..836847- >NO02G03110.1 ID=NO02G03110.1|Name=NO02G03110.1|organism=Nannochloropsis oceanica|type=CDS|length=1320bp|location=Sequence derived from alignment at chr2:834364..836847- (Nannochloropsis oceanica)
ATGCGATCTGGCTTGCCTTCCAAAAAACTTGCACGACACGCGAAAATGAT
CTTTCATCGCGCCGTCCTCTCATTATCCCTTCGCACTCTCCCTACCCTCA
TCCCCCACTTCAAATCCACAGGGCTTAGCTACAGTAACCAAAAAATGGAC
ATTGTAAACCGCCCTTTGGGCGCGGCCGAGGAGACCGTCATGACGCCCAC
GGGCGCAGGACCGGAGCCGGTCAACATCAGAGAGTACGAGGCGTATGCGA
AAGCGACTCTTCCGAAAAACGCGTTTGACTACTACGCCAGCGGGGCGAAC
GACATGATCACCCTCCGCGAGAACCGAGCGGCATTTGAACGCTTGCGTAT
GCGCCCTCGCATCTTGCGGGACGTGAGCGAGGTTGACACCGCCACCACCA
TATTGGGGGAGCCAGTGGCTTACCCCATTTGCGTGGCGCCTACCGCCATG
CAGCGTATGGCCAACCATGAGGGTGAACTTGCCACTGCACGTGCTTGTGC
CCGGCAGAAAACTCTCATGACCTTGTCTTCCTGGTCGACGACGTCCGTTG
AAGACGTGGCGGCGGTTGGGGTGGGAGCGGCTAAGTGGTTCCAGCTCTAC
GTCTACAAGGATCGCGAGCTGACGGCCGAGCTAGCTCGACGAGCGGAGCG
AGCGGGGTACAAAGCCTTGGCGATCACAGTGGACACACCTGTATTGGGTA
GACGGGAGGCGGACGTACGAAATCGCTTCAAGCTGCCTGGGCACTTAACG
ATGGCAAATTTTGCGAGCGAGGGAGGGTCGCATGCGGAAGGCACCAAGGA
CGGAGGGAAGGACTCGGGATTGGCGGCGTATGTGGCGTCACTCATTGATC
GAACGCTCCAGTGGAAGGATGTACAATGGCTGCGCAGCGTATGCAACCTA
CCAATCGTGGTCAAGGGTGTCATGACACCCGAGGACGCCCTCATGGCGAT
GCAGTGTGGGGTGGACGCCATCTGGGTCTCCAACCACGGCGCCCGTCAGC
TCGACACGGTGGCTTCCACCATTGAGCTTCTTCCTGATATAGTCAAGGCT
GTCAACGGTCGCTGCGAGGTGTATCTGGATGGCGGTGTGTGCCGCGGGAC
GGATGCATTCAAGGCCCTGGCATTGGGAGCACGTGCTGTTTTTATTGGCC
GGCCGGTGCTTTGGGGCTTGGCGCACAGCGGGGAAGAAGGCGTGTACCAG
GTGTTGGAGTTGTTGAAGAAAGAGTTTGAGATGGCGATGCGGTTAACGGG
GTGCACCAAGCTCTCGGACATCCAGCGAGCGATGGTCACGCACGTGGCCT
CGTACCAGTCAAAGATCTAA back to top
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