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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr2 | genome | chr2:747237..750686 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO02G02730.2 vs.
Match: EWM30406.1 (adenosine 3 -phospho 5 -phosphosulfate transporter 2 [Nannochloropsis gaditana]) HSP 1 Score: 605.9 bits (1561), Expect = 1.200e-169 Identity = 337/478 (70.50%), Postives = 386/478 (80.75%), Query Frame = 0
Query: 42 VVLSVLDDGVGHNSELLRRSESNAASVVPKQRSSLSFLSLGGSSSKARKHIELGNPH---------GAGIALGGMADDAALSAATAAGGKESWRDREAGSDVHHGHERPSFRVIGVQISHMSRTGQFLFCTFGVFSFLLVYGFLQEYMVIHVFQRQLGIFLTLCQFAGYSSLAALHRLIHADTPRRIPLGYYVLLATLQATMQGLTNLSMRWLNYPAKMLFKSSRVIPTMIVGVFIMKKRYKMKDYMVVALLSLGLVFFIQADVKVSPSFHPLGIIFISMALVVDAAIVNIQEYTLRRYDASHDELIFYSYGIGSFILFAYCLFSMELYDGIVFLRSQPPRSTLCLIIFCFCGYFGVTCVAALTKKFGALASTMTTTARKALTLFLSFFIFPKPATGMHVFGGVLFVLGLSVKAVPTGRNKDYASSSSASSSIPSTSSAATLLSPSCSSPSHASMKSKQTRSLLSSSA--AVPPSSSS 509
V LS++D+ GH+ E LRRSES+A+ + PKQR S + S + RKH+ LG P +G D A++ AATAAG ++WR S HHGH+RPSFRVIGVQISH++RTGQFLFCT GVFSFLLVYGFLQEYMVIHVF+R+LGIFLTLCQF+GYSSLAALHRLIHADTPRRIP GYY+LLA+LQA MQGLTNLSMRWLNYPAKMLFKSSRVIPTM+VG+ IMKKRYK+KDY+VVALLSLGLVFF+QADVKVSPSFHPLGIIFI MAL VDAAIVNIQE+TLR+YDASHDELIFYSYG+GS ILF YCL S EL++GIVFL+S R+T CL++FC CGYFGVTCVAALTKKFGALASTMTTTARKALTLFLSFFIFPKPATGMHV GG+LFV GLSVKA+PTGRNKD S A+S +PS+S A +K++QTRSLLSSSA + P+++S
Sbjct: 28 VNLSIMDEDTGHSYEHLRRSESSASGMPPKQRLGQSIVGGETISGRIRKHLGLGAPDVDSQNGQTSESGSTFRPPVDAASIPAATAAG--KTWRSH--ASQAHHGHDRPSFRVIGVQISHLTRTGQFLFCTLGVFSFLLVYGFLQEYMVIHVFERRLGIFLTLCQFSGYSSLAALHRLIHADTPRRIPFGYYILLASLQALMQGLTNLSMRWLNYPAKMLFKSSRVIPTMLVGILIMKKRYKVKDYVVVALLSLGLVFFVQADVKVSPSFHPLGIIFICMALAVDAAIVNIQEFTLRKYDASHDELIFYSYGLGSIILFIYCLLSWELFEGIVFLQSHGLRATCCLLVFCSCGYFGVTCVAALTKKFGALASTMTTTARKALTLFLSFFIFPKPATGMHVVGGLLFVSGLSVKAIPTGRNKD--DPSIATSYLPSSSCVA--------------LKAQQTRSLLSSSAVKTIGPTTTS 485
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO02G02730.2 ID=NO02G02730.2|Name=NO02G02730.2|organism=Nannochloropsis oceanica|type=mRNA|length=3331bp AAAGACACCAAGGTACTCTCAGACATGTCCTAGCCAGAGGCTTCGGTCCC TTTAGCTCCTTTCTGCACTTCACGGCGGTGCCTCGGCCGACTCACCTCGA ACTAGAACAACACGGCTTTCCGCATCTGCCTTCCAAGCAAGTGGCAGCAG TGGCAGCAGCAACAGCAGACAAGTGCGCGCTTATAATAGAGCCCAAAGCT TCGGAATTACACAGAGATGCGGGCAAGGCTCACCCAGGTAGGAATGCGGC AGCCTCTATGCACCGTTCACCCTTTCTCATCATCCCACCATTACCACCCT CAAATAATCAGGCCACGGGCGCAGCAAGCTCTCAAACATCGTCGTTAGGG GGAGTGGAAGACCTAGACCATGACGACCATGTTGTACTCTCGGTGCTGGA CGACGGTGTGGGCCACAACTCCGAGTTGTTGCGGAGAAGCGAGTCGAATG CCGCGAGTGTAGTACCTAAGCAGCGCTCGAGTCTGAGTTTCCTCAGTTTA GGCGGGAGTAGCAGCAAGGCCCGGAAGCACATAGAATTGGGAAACCCGCA TGGCGCGGGCATTGCGCTCGGAGGTATGGCTGATGATGCAGCTCTCTCGG CAGCTACGGCAGCGGGAGGTAAGGAGAGTTGGAGAGATCGAGAGGCGGGC AGCGACGTTCACCATGGGCATGAACGGCCATCTTTCCGGGTGATCGGTGT GCAGATCTCACACATGTCACGGACGGGGCAGTTTCTGTTCTGTACTTTTG GGGTCTTTTCTTTTTTGTTGGTATACGGGTTCCTTCAGGAGTATATGGTT ATTCACGTCTTCCAGCGGCAGTTGGGCATCTTCTTGACTTTGTGTCAATT TGCGGGTTACTCGTCATTGGCGGCTTTGCATCGGCTCATTCATGCGGATA CGCCACGGAGAATCCCGTTGGGGTACTACGTCTTGCTGGCGACGCTGCAA GCGACGATGCAGGGGTTGACGAATTTGTCAATGCGGTGGTTGAACTACCC GGCGAAGATGTTGTTCAAGTCTTCGAGGGTGATTCCGACAATGATCGTGG GGGTTTTCATCATGAAGAAGCGGTACAAGATGAAAGACTACATGGTCGTC GCCCTTCTATCCCTGGGCCTCGTCTTCTTCATCCAAGCCGACGTGAAAGT ATCCCCCTCCTTTCATCCTCTGGGGATAATTTTCATCTCCATGGCTCTAG TCGTCGATGCGGCCATAGTGAACATCCAGGAATACACCTTGAGGAGATAC GACGCTAGCCATGACGAACTCATCTTCTACTCCTACGGCATTGGATCGTT CATCCTTTTTGCCTACTGCCTCTTCTCCATGGAGCTTTACGATGGCATCG TATTTCTCCGCTCCCAGCCCCCTCGCAGCACCCTCTGTCTCATCATTTTC TGTTTCTGCGGCTACTTCGGTGTCACCTGCGTGGCGGCCCTGACCAAGAA ATTCGGTGCTCTTGCCTCGACTATGACGACAACCGCACGGAAAGCCTTGA CACTCTTTCTTTCCTTCTTCATCTTTCCGAAACCTGCCACGGGGATGCAT GTTTTTGGGGGGGTCCTTTTCGTGTTGGGGCTGTCCGTTAAAGCTGTGCC CACAGGCCGGAACAAGGATTATGCTTCCTCTTCCTCCGCCTCCTCCTCCA TCCCCTCCACCTCTTCGGCCGCAACGTTACTATCCCCTTCTTGTTCCTCC CCCTCGCATGCATCCATGAAGTCAAAACAAACACGTTCGTTGCTCTCCTC GTCCGCGGCAGTGCCACCATCATCATCATCATCATCATCGGCAGCGGCAT CAGCAGTTGCCACCTCGCATCAGGCGATGGGGAGCATCGCAAAAAGCATA GAATTAGTCTAATGCATAAAATTAGAACGAATAGAATGAGAATCTTGTCC AAATTTGCAAAAGTCGCTCCATCCATCTCTCTTCCCTCTCCTTGCTTGTG TATATGGTTTAGAGCGAGTGAGAGAGTGAGGGGTTGCTTATCTGCCTTTC CAAAGAAATGGATGGGGGCCCGGGGAAATCATTGCTCGAAATAAATGGAG GGATCGAAGTAGAAGAAGCGGCAGCTGTTTTTATCCCTCCTATGTGCTCT GCGTCGCATGCCCGTCCAGCTTAAGCTTACCGACCGAAAAACAATAAAAG TCACTCAATCAAAGCAAAGAACAAAGTCCAAGAAACAAACTGCAATGTGG AGACTTCACTAGATTCTTGAGGGTCTTTTCTCTGGCGTGTATCTCCACTA TTTTACTTGTTCAACCAGTCTTTTGAATAGTCCTAGAGTGTTTGTGGTCA CACATTCCTTGTAGTATTTATTTTATATACACTTCCCTACACCAATAGGT ATTTTCCCAACACAAGCATCATCATCATCATCAGCAGCAGCAGCAGCAGC AGCACACAGCAGCAGCAGCACACAGCAGCACTCAGCAGTAGCAGTATTGG GACCCTAATCCCTAGAGTCACCATCAACACCACCATCAGCAGCAGCAGCA AGCTGTTCGATCTTCAGCCCGATCCTCCTCCTCGCTTCATCAATCGCATC CGGGGTCACACGCGCCGCCAATCTCGTCGTATTAAGCTTCGGAGACCGTT CCCTCCCTTCTTCACTCCCACCCTCCGTCACATAAAGATGCGCCAAATAC TTCGTCATGATCAAGACATACATCCCGCAGTCATACCCGTTCACCTGCTG TGGACATCCCCGCACAGCTTCCACCTTCCCTCCCTCCTTCCCTCCCTCCT TCCCTGCCACCATGCGCCAAAACTGAGCAGCTGTCCTTTTGGCGGCTGGT TCATTCCTACCACCGCTCGAGTCGAGGTGGAAGAATTTCCCGGGCTGAGC GCTGCTGCCGTTGCCAGCGCTGTAGACGAGAAGGCTCCTGATAGTGGATG TGTGTAATAGGTTCTGTGAGTGTCGTGGAGGAATGAAAGAGACCCTGTGA GAAACGGACGGGGTAGGAAAAGAAGCAAAGTTGTCACACGCATGCAGACC TCCGAGGAGAACGGTGACATGCTAACATACATACCAGTGCGTGCAATCAC TCCTGAAATCCTCGGCGTCGTTGACGGGGATGAAGACCATGCTTCGTCTA TCCAGCTTCAAGCCCTCCCCCACTTCCTCCAACTCGCCTTGGTCTACGAT ACAATTTTAAGTAATGGATTCCCAAATAAGTTTCCATAAAACAATGGATG TCACGGAGGTTACAAATTCATATGAGAGCTCCTACCAAGAGCCGTCACTT TTTGCTCTTCAAATTTTTGCAGATCTGTCCCTGCACCGCCCGTCCTCCCT CCCTTCTTCATTCTATTCGGCCCCTCCCCCC back to topprotein sequence of NO02G02730.2 >NO02G02730.2-protein ID=NO02G02730.2-protein|Name=NO02G02730.2|organism=Nannochloropsis oceanica|type=polypeptide|length=535bp MHRSPFLIIPPLPPSNNQATGAASSQTSSLGGVEDLDHDDHVVLSVLDDG VGHNSELLRRSESNAASVVPKQRSSLSFLSLGGSSSKARKHIELGNPHGA GIALGGMADDAALSAATAAGGKESWRDREAGSDVHHGHERPSFRVIGVQI SHMSRTGQFLFCTFGVFSFLLVYGFLQEYMVIHVFQRQLGIFLTLCQFAG YSSLAALHRLIHADTPRRIPLGYYVLLATLQATMQGLTNLSMRWLNYPAK MLFKSSRVIPTMIVGVFIMKKRYKMKDYMVVALLSLGLVFFIQADVKVSP SFHPLGIIFISMALVVDAAIVNIQEYTLRRYDASHDELIFYSYGIGSFIL FAYCLFSMELYDGIVFLRSQPPRSTLCLIIFCFCGYFGVTCVAALTKKFG ALASTMTTTARKALTLFLSFFIFPKPATGMHVFGGVLFVLGLSVKAVPTG RNKDYASSSSASSSIPSTSSAATLLSPSCSSPSHASMKSKQTRSLLSSSA AVPPSSSSSSSAAASAVATSHQAMGSIAKSIELV* back to topmRNA from alignment at chr2:747237..750686+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO02G02730.2 ID=NO02G02730.2|Name=NO02G02730.2|organism=Nannochloropsis oceanica|type=mRNA|length=3450bp|location=Sequence derived from alignment at chr2:747237..750686+ (Nannochloropsis oceanica) AAAGACACCAAGGTACTCTCAGACATGTCCTAGCCAGAGGCTTCGGTCCC
TTTAGCTCCTTTCTGCACTTCACGGCGGTGCCTCGGCCGACTCACCTCGA
ACTAGAACAACACGGCTTTCCGCATCTGCCTTCCAAGCAAGTGGCAGCAG
TGGCAGCAGCAACAGCAGACAAGTGCGCGCTTATAATAGAGCCCAAAGCT
TCGGAATTACACAGAGATGCGGGCAAGGCTCACCCAGGTAGGAATGCGGC
AGCCTCTATGCACCGTTCACCCTTTCTCATCATCCCACCATTACCACCCT
CAAATAATCAGGCCACGGGCGCAGCAAGCTCTCAAACATCGTCGTTAGGG
GGAGTGGAAGACCTAGACCATGACGACCATGTTGTACTCTCGGTGCTGGA
CGACGGTGTGGGCCACAACTCCGAGTTGTTGCGGAGAAGCGAGTCGAATG
CCGCGAGTGTAGTACCTAAGCAGCGCTCGAGTCTGAGTTTCCTCAGTTTA
GGCGGGAGTAGCAGCAAGGCCCGGAAGCACATAGAATTGGGAAACCCGCA
TGGCGCGGGCATTGCGCTCGGAGGTATGGCTGATGATGCAGCTCTCTCGG
CAGCTACGGCAGCGGGAGGTAAGGAGAGTTGGAGAGATCGAGAGGCGGGC
AGCGACGTTCACCATGGGCATGAACGGCCATCTTTCCGGGTGATCGGTGT
GCAGATCTCACACATGTCACGGACGGGGCAGTTTCTGTTCTGTACTTTTG
GGGTCTTTTCTTTTTTGTTGGTATACGGGTTCCTTCAGGAGTATATGGTT
ATTCACGTCTTCCAGCGGCAGTTGGGCATCTTCTTGACTTTGTGTCAATT
TGCGGGTTACTCGTCATTGGCGGCTTTGCATCGGCTCATTCATGCGGATA
CGCCACGGAGAATCCCGTTGGGGTACTACGTCTTGCTGGCGACGCTGCAA
GCGACGATGCAGGGGTTGACGAATTTGTCAATGCGGTGGTTGAACTACCC
GGCGAAGATGTTGTTCAAGTCTTCGAGGGTGATTCCGACAATGATCGTGG
GGGTTTTCATCATGAAGAAGCGGTACAAGGTACACTCGTGCTTTTGTGTT
GAGGGGGGTTGTGACGGATTTGTTGGTCGTTCATCTTAAGATTTACGTCT
CACGTACTCCCTTCCGCCCTCCCTCTCTCCCTCCCCAACCTTTCTCAGAT
GAAAGACTACATGGTCGTCGCCCTTCTATCCCTGGGCCTCGTCTTCTTCA
TCCAAGCCGACGTGAAAGTATCCCCCTCCTTTCATCCTCTGGGGATAATT
TTCATCTCCATGGCTCTAGTCGTCGATGCGGCCATAGTGAACATCCAGGA
ATACACCTTGAGGAGATACGACGCTAGCCATGACGAACTCATCTTCTACT
CCTACGGCATTGGATCGTTCATCCTTTTTGCCTACTGCCTCTTCTCCATG
GAGCTTTACGATGGCATCGTATTTCTCCGCTCCCAGCCCCCTCGCAGCAC
CCTCTGTCTCATCATTTTCTGTTTCTGCGGCTACTTCGGTGTCACCTGCG
TGGCGGCCCTGACCAAGAAATTCGGTGCTCTTGCCTCGACTATGACGACA
ACCGCACGGAAAGCCTTGACACTCTTTCTTTCCTTCTTCATCTTTCCGAA
ACCTGCCACGGGGATGCATGTTTTTGGGGGGGTCCTTTTCGTGTTGGGGC
TGTCCGTTAAAGCTGTGCCCACAGGCCGGAACAAGGATTATGCTTCCTCT
TCCTCCGCCTCCTCCTCCATCCCCTCCACCTCTTCGGCCGCAACGTTACT
ATCCCCTTCTTGTTCCTCCCCCTCGCATGCATCCATGAAGTCAAAACAAA
CACGTTCGTTGCTCTCCTCGTCCGCGGCAGTGCCACCATCATCATCATCA
TCATCATCGGCAGCGGCATCAGCAGTTGCCACCTCGCATCAGGCGATGGG
GAGCATCGCAAAAAGCATAGAATTAGTCTAATGCATAAAATTAGAACGAA
TAGAATGAGAATCTTGTCCAAATTTGCAAAAGTCGCTCCATCCATCTCTC
TTCCCTCTCCTTGCTTGTGTATATGGTTTAGAGCGAGTGAGAGAGTGAGG
GGTTGCTTATCTGCCTTTCCAAAGAAATGGATGGGGGCCCGGGGAAATCA
TTGCTCGAAATAAATGGAGGGATCGAAGTAGAAGAAGCGGCAGCTGTTTT
TATCCCTCCTATGTGCTCTGCGTCGCATGCCCGTCCAGCTTAAGCTTACC
GACCGAAAAACAATAAAAGTCACTCAATCAAAGCAAAGAACAAAGTCCAA
GAAACAAACTGCAATGTGGAGACTTCACTAGATTCTTGAGGGTCTTTTCT
CTGGCGTGTATCTCCACTATTTTACTTGTTCAACCAGTCTTTTGAATAGT
CCTAGAGTGTTTGTGGTCACACATTCCTTGTAGTATTTATTTTATATACA
CTTCCCTACACCAATAGGTATTTTCCCAACACAAGCATCATCATCATCAT
CAGCAGCAGCAGCAGCAGCAGCACACAGCAGCAGCAGCACACAGCAGCAC
TCAGCAGTAGCAGTATTGGGACCCTAATCCCTAGAGTCACCATCAACACC
ACCATCAGCAGCAGCAGCAAGCTGTTCGATCTTCAGCCCGATCCTCCTCC
TCGCTTCATCAATCGCATCCGGGGTCACACGCGCCGCCAATCTCGTCGTA
TTAAGCTTCGGAGACCGTTCCCTCCCTTCTTCACTCCCACCCTCCGTCAC
ATAAAGATGCGCCAAATACTTCGTCATGATCAAGACATACATCCCGCAGT
CATACCCGTTCACCTGCTGTGGACATCCCCGCACAGCTTCCACCTTCCCT
CCCTCCTTCCCTCCCTCCTTCCCTGCCACCATGCGCCAAAACTGAGCAGC
TGTCCTTTTGGCGGCTGGTTCATTCCTACCACCGCTCGAGTCGAGGTGGA
AGAATTTCCCGGGCTGAGCGCTGCTGCCGTTGCCAGCGCTGTAGACGAGA
AGGCTCCTGATAGTGGATGTGTGTAATAGGTTCTGTGAGTGTCGTGGAGG
AATGAAAGAGACCCTGTGAGAAACGGACGGGGTAGGAAAAGAAGCAAAGT
TGTCACACGCATGCAGACCTCCGAGGAGAACGGTGACATGCTAACATACA
TACCAGTGCGTGCAATCACTCCTGAAATCCTCGGCGTCGTTGACGGGGAT
GAAGACCATGCTTCGTCTATCCAGCTTCAAGCCCTCCCCCACTTCCTCCA
ACTCGCCTTGGTCTACGATACAATTTTAAGTAATGGATTCCCAAATAAGT
TTCCATAAAACAATGGATGTCACGGAGGTTACAAATTCATATGAGAGCTC
CTACCAAGAGCCGTCACTTTTTGCTCTTCAAATTTTTGCAGATCTGTCCC
TGCACCGCCCGTCCTCCCTCCCTTCTTCATTCTATTCGGCCCCTCCCCCC
back to topCoding sequence (CDS) from alignment at chr2:747237..750686+ >NO02G02730.2 ID=NO02G02730.2|Name=NO02G02730.2|organism=Nannochloropsis oceanica|type=CDS|length=1605bp|location=Sequence derived from alignment at chr2:747237..750686+ (Nannochloropsis oceanica) ATGCACCGTTCACCCTTTCTCATCATCCCACCATTACCACCCTCAAATAA TCAGGCCACGGGCGCAGCAAGCTCTCAAACATCGTCGTTAGGGGGAGTGG AAGACCTAGACCATGACGACCATGTTGTACTCTCGGTGCTGGACGACGGT GTGGGCCACAACTCCGAGTTGTTGCGGAGAAGCGAGTCGAATGCCGCGAG TGTAGTACCTAAGCAGCGCTCGAGTCTGAGTTTCCTCAGTTTAGGCGGGA GTAGCAGCAAGGCCCGGAAGCACATAGAATTGGGAAACCCGCATGGCGCG GGCATTGCGCTCGGAGGTATGGCTGATGATGCAGCTCTCTCGGCAGCTAC GGCAGCGGGAGGTAAGGAGAGTTGGAGAGATCGAGAGGCGGGCAGCGACG TTCACCATGGGCATGAACGGCCATCTTTCCGGGTGATCGGTGTGCAGATC TCACACATGTCACGGACGGGGCAGTTTCTGTTCTGTACTTTTGGGGTCTT TTCTTTTTTGTTGGTATACGGGTTCCTTCAGGAGTATATGGTTATTCACG TCTTCCAGCGGCAGTTGGGCATCTTCTTGACTTTGTGTCAATTTGCGGGT TACTCGTCATTGGCGGCTTTGCATCGGCTCATTCATGCGGATACGCCACG GAGAATCCCGTTGGGGTACTACGTCTTGCTGGCGACGCTGCAAGCGACGA TGCAGGGGTTGACGAATTTGTCAATGCGGTGGTTGAACTACCCGGCGAAG ATGTTGTTCAAGTCTTCGAGGGTGATTCCGACAATGATCGTGGGGGTTTT CATCATGAAGAAGCGGTACAAGATGAAAGACTACATGGTCGTCGCCCTTC TATCCCTGGGCCTCGTCTTCTTCATCCAAGCCGACGTGAAAGTATCCCCC TCCTTTCATCCTCTGGGGATAATTTTCATCTCCATGGCTCTAGTCGTCGA TGCGGCCATAGTGAACATCCAGGAATACACCTTGAGGAGATACGACGCTA GCCATGACGAACTCATCTTCTACTCCTACGGCATTGGATCGTTCATCCTT TTTGCCTACTGCCTCTTCTCCATGGAGCTTTACGATGGCATCGTATTTCT CCGCTCCCAGCCCCCTCGCAGCACCCTCTGTCTCATCATTTTCTGTTTCT GCGGCTACTTCGGTGTCACCTGCGTGGCGGCCCTGACCAAGAAATTCGGT GCTCTTGCCTCGACTATGACGACAACCGCACGGAAAGCCTTGACACTCTT TCTTTCCTTCTTCATCTTTCCGAAACCTGCCACGGGGATGCATGTTTTTG GGGGGGTCCTTTTCGTGTTGGGGCTGTCCGTTAAAGCTGTGCCCACAGGC CGGAACAAGGATTATGCTTCCTCTTCCTCCGCCTCCTCCTCCATCCCCTC CACCTCTTCGGCCGCAACGTTACTATCCCCTTCTTGTTCCTCCCCCTCGC ATGCATCCATGAAGTCAAAACAAACACGTTCGTTGCTCTCCTCGTCCGCG GCAGTGCCACCATCATCATCATCATCATCATCGGCAGCGGCATCAGCAGT TGCCACCTCGCATCAGGCGATGGGGAGCATCGCAAAAAGCATAGAATTAG TCTAA back to top
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