NO02G02330.1, NO02G02330.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO02G02330.1
Unique NameNO02G02330.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length504
Alignment locationchr2:651060..651941 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:651060..651941 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G02330.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G02330NO02G02330Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO02G02330.1NO02G02330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO02G02330.1.cds1NO02G02330.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G02330.1.cds2NO02G02330.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G02330.1.cds3NO02G02330.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G02330.1.cds4NO02G02330.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO02G02330.1 ID=NO02G02330.1|Name=NO02G02330.1|organism=Nannochloropsis oceanica|type=mRNA|length=504bp
ATGCCACGCGCCCCAACTGCAAGCACAACGCCCAGCAGTATCGATGGGTT
GGAGACATTCCGCCAAGCTTTTGAGGGGCGGAAGATCTGGAAGTTGGTCA
CTTTCAGGACAAGATTAGGAAAAACCAGTTACTTTTTACTTTCACGTCGA
CGGCGCGAGAAGCGGCACCAGCAGCGGCAGCGGCAACAGCTGCAGCAGCG
GCAACAGCAGCAGCAGCGGCCGTACCACTATTACCACCAAAAAGAAAAAT
TGACGACAAAGAGAGTAGTGGCAACAGCTGCAGCCGCAGCAGACAGTAGC
AGCCGCAGCAGCAGCAGACCATCAGCATCAGCTGCACTATCGCCAGCAAG
AGCAGTAATAGCAGCAGCAGCAGCTTCAGCAGCGCAACAAGATTTGGCGA
TTGCCAAGGAACAAACGTACCAAAACCAAATCAAGACGAGGTGGGATACC
CAAAACAACACAAGATGTTATGAGGATCAAAAAAAGAACCTCGCACGCGC
ATAG
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protein sequence of NO02G02330.1

>NO02G02330.1-protein ID=NO02G02330.1-protein|Name=NO02G02330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=168bp
MPRAPTASTTPSSIDGLETFRQAFEGRKIWKLVTFRTRLGKTSYFLLSRR
RREKRHQQRQRQQLQQRQQQQQRPYHYYHQKEKLTTKRVVATAAAAADSS
SRSSSRPSASAALSPARAVIAAAAASAAQQDLAIAKEQTYQNQIKTRWDT
QNNTRCYEDQKKNLARA*
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mRNA from alignment at chr2:651060..651941-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO02G02330.1 ID=NO02G02330.1|Name=NO02G02330.1|organism=Nannochloropsis oceanica|type=mRNA|length=882bp|location=Sequence derived from alignment at chr2:651060..651941- (Nannochloropsis oceanica)
ATGCCACGCGCCCCAACTGCAAGCACAACGCCCAGCAGTATCGATGGGTT GGAGACATTCCGCCAAGCTTTTGAGGGGCGGAAGATCTGGAAGTTGGTCA CTTTCAGGACAAGGTAAGAATGGCGCGGAAGTGAAGGAAGGGGCGGAGGG GAAAAGGGAGGATGATGCGGCTCATGGTGCTTGATTATATGCGTTTTGTG CTTCTTGCCCTCGTACATGTGAGTTTAATGCGTGCTATTGCACCGCTTGC TTGGAGAATGAAGAAGTGTTGGAGGAATTGATAACCAACGTTTTCCTTCT TCTACAGATTAGGAAAAACCAGTTACTTTTTACTTTCACGTCGAGTAACT TCATGGCGCAGATGCCATTTTCTCCGCAATCAGAAACACCGTCAACGGTA CATGTAGCGGCGCGAGAAGCGGCACCAGCAGCGGCAGCGGCAACAGCTGC AGCAGCGGCAACAGCAGCAGCAGCGGCCGTACCACTATTACCACCAAAAA GAAAAATTGACGACAAAGAGAGGTGGGGAGGGGGAAGCGATGAACGCCGG GTTGAGTCGAGGAATGGAGGAGACGAACGTGGTGGACGTAAGATGAGAAG AAAGCATCACTATAGTAATGTAGTATCACCATTTGGAACACAGTAGTGGC AACAGCTGCAGCCGCAGCAGACAGTAGCAGCCGCAGCAGCAGCAGACCAT CAGCATCAGCTGCACTATCGCCAGCAAGAGCAGTAATAGCAGCAGCAGCA GCTTCAGCAGCGCAACAAGATTTGGCGATTGCCAAGGAACAAACGTACCA AAACCAAATCAAGACGAGGTGGGATACCCAAAACAACACAAGATGTTATG AGGATCAAAAAAAGAACCTCGCACGCGCATAG
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Coding sequence (CDS) from alignment at chr2:651060..651941-

>NO02G02330.1 ID=NO02G02330.1|Name=NO02G02330.1|organism=Nannochloropsis oceanica|type=CDS|length=504bp|location=Sequence derived from alignment at chr2:651060..651941- (Nannochloropsis oceanica)
ATGCCACGCGCCCCAACTGCAAGCACAACGCCCAGCAGTATCGATGGGTT
GGAGACATTCCGCCAAGCTTTTGAGGGGCGGAAGATCTGGAAGTTGGTCA
CTTTCAGGACAAGATTAGGAAAAACCAGTTACTTTTTACTTTCACGTCGA
CGGCGCGAGAAGCGGCACCAGCAGCGGCAGCGGCAACAGCTGCAGCAGCG
GCAACAGCAGCAGCAGCGGCCGTACCACTATTACCACCAAAAAGAAAAAT
TGACGACAAAGAGAGTAGTGGCAACAGCTGCAGCCGCAGCAGACAGTAGC
AGCCGCAGCAGCAGCAGACCATCAGCATCAGCTGCACTATCGCCAGCAAG
AGCAGTAATAGCAGCAGCAGCAGCTTCAGCAGCGCAACAAGATTTGGCGA
TTGCCAAGGAACAAACGTACCAAAACCAAATCAAGACGAGGTGGGATACC
CAAAACAACACAAGATGTTATGAGGATCAAAAAAAGAACCTCGCACGCGC
ATAG
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Synonyms
Publications