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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr2 | genome | chr2:573246..575076 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO02G02010.1 vs.
Match: EWM30450.1 (soluble pyridine nucleotide transhydrogenase [Nannochloropsis gaditana]) HSP 1 Score: 953.7 bits (2464), Expect = 2.500e-274 Identity = 478/577 (82.84%), Postives = 525/577 (90.99%), Query Frame = 0
Query: 1 MLMAAGSAVRRRLLPVVAGLPRVRLPIMSQQSCRAFANDSASKKDDEATTKVPIHPANANPFPTAGA-HAGKPDFDLIVIGSGPAAQACAISSSRRGKRVAVIDKPGMLGGVCVNTGTIPSKTFREAVLHLTGYRHQGFYGKVYAPSDRISMEGILHRVSMVVKGEKDVMRNRFRQYGITHIYGTAQFTGEEKSVQVTSAALEIEDRKKEHAIGTPGAGLEVEPYSKPFTAEKMLVAVGTTPARRPDFEFDGVHIIDSDDLLSGSIQKVPRELIVVGAGVIGMEYASMFNVIPGSRVTVIDGRPDILTFADKEIIQSLEYEMRQKGARFLLGEEVLSARIEGDHVVADMASGKVLRGDCLLYTVGRQGNTAGLCLEKTGLEVNKRGLLTINDNYQTSVPWLYAAGDCIGFPALASTSSQQGRMAAHHMWGEEGEEANKAFGGFPYGIYTIPEISMVGYTEQQLTQQKIPYEMGVARYDELAKGQMMGGSNGMLKILFHAETLKILGVHCMGESATEIVHVGQVAMDMNLDMHFLTENVFNYPTFAESYRVAAFNGLKRLALAGYTDLSDH---GAAS 574
ML + + +R +V + VR P +++ RAFA+ S S KD+++ ++ IHP ++NP T GA ++ KPDFDL+VIGSGPAAQACAISSSRRGK+VAVIDKPGMLGGVCVNTGTIPSKTFREAVLHLTGYRHQGFYGK YAP+ RISMEGILHRVSMVVKGEKDVMRNRFRQYGI+HIYGTA FTGEEK+VQVTS A+E E+RK++ A+GT GAGLEVEP+SKPFT EK LVAVGTTPARR DF+FDGVHIIDSDDLLSGS+Q+VPRELIVVGAGVIGMEYASMFNVIPG+RVTVIDGRPD+LTFADKEIIQSLEYEMRQKGARFLLGEEVL+AR+EGDHVVA+MASGKVLRGDCLLYTVGRQGNTAGL L+K G+EV+KRGL+T+NDNYQTSVPWLYAAGDCIGFPALASTSSQQGRMAAHHMWG +A KAFGGFPYGIYTIPEISMVGYTEQQLTQQKIPYEMGVARYDELAKGQMMGGS+GMLK+LFHAETLKILGVHCMGESATEIVHVGQVAMDM +DMHFLTENVFNYPTFAESYRVAAFNGLKRLALAGYTD+S H GAAS
Sbjct: 1 MLNSTSTTLRGPFSLLVGRMSLVRRPTLARNG-RAFADSSKSTKDEDSGSQTTIHPTHSNPKATPGAVNSQKPDFDLMVIGSGPAAQACAISSSRRGKKVAVIDKPGMLGGVCVNTGTIPSKTFREAVLHLTGYRHQGFYGKSYAPAGRISMEGILHRVSMVVKGEKDVMRNRFRQYGISHIYGTAHFTGEEKTVQVTSVAVEEEERKRKRAVGTAGAGLEVEPFSKPFTTEKALVAVGTTPARRADFDFDGVHIIDSDDLLSGSLQRVPRELIVVGAGVIGMEYASMFNVIPGTRVTVIDGRPDVLTFADKEIIQSLEYEMRQKGARFLLGEEVLNARVEGDHVVANMASGKVLRGDCLLYTVGRQGNTAGLGLDKAGVEVSKRGLMTVNDNYQTSVPWLYAAGDCIGFPALASTSSQQGRMAAHHMWGGNEGDALKAFGGFPYGIYTIPEISMVGYTEQQLTQQKIPYEMGVARYDELAKGQMMGGSSGMLKVLFHAETLKILGVHCMGESATEIVHVGQVAMDMGMDMHFLTENVFNYPTFAESYRVAAFNGLKRLALAGYTDVSQHQHEGAAS 576
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO02G02010.1 ID=NO02G02010.1|Name=NO02G02010.1|organism=Nannochloropsis oceanica|type=mRNA|length=1728bp ATGCTGATGGCAGCTGGTAGCGCAGTCAGGAGACGTCTGCTACCTGTCGT TGCGGGGCTACCGCGCGTCCGCCTCCCCATAATGTCCCAGCAGAGTTGCC GTGCATTTGCCAACGACAGCGCCTCGAAAAAGGACGACGAGGCCACCACT AAAGTCCCCATACATCCCGCCAACGCCAACCCCTTTCCCACCGCTGGTGC GCATGCGGGCAAACCTGATTTTGATCTTATTGTAATAGGCTCTGGTCCAG CCGCCCAAGCCTGCGCCATCTCTTCCAGCCGACGTGGCAAGAGGGTTGCT GTCATTGACAAGCCCGGTATGCTTGGTGGGGTGTGCGTCAACACGGGCAC GATACCTAGCAAAACGTTTCGAGAGGCCGTCCTTCATCTGACGGGCTATC GGCACCAAGGCTTTTACGGCAAGGTCTACGCGCCATCGGATCGCATCAGT ATGGAGGGGATACTGCATCGTGTCTCAATGGTGGTAAAGGGCGAGAAGGA TGTGATGCGGAATCGTTTTCGGCAATACGGCATTACCCACATCTATGGCA CGGCACAATTTACGGGGGAAGAGAAGTCGGTGCAAGTCACCTCGGCGGCC TTGGAGATTGAAGACCGAAAGAAAGAGCACGCCATAGGTACACCAGGGGC GGGGCTTGAGGTGGAACCGTATAGCAAGCCGTTCACGGCGGAGAAGATGT TGGTGGCTGTGGGGACAACGCCAGCCCGCAGGCCCGATTTTGAATTTGAC GGGGTGCACATCATTGATAGTGATGATTTGCTCAGTGGGTCGATTCAGAA GGTACCGCGGGAGCTGATTGTGGTGGGGGCGGGCGTGATTGGGATGGAGT ATGCGAGTATGTTTAATGTTATCCCCGGGTCGAGGGTAACGGTGATTGAT GGACGTCCGGATATCTTGACGTTCGCGGATAAAGAGATCATCCAGAGCTT GGAATATGAAATGCGTCAGAAGGGGGCTCGGTTTTTGTTGGGGGAGGAGG TGTTGAGTGCTCGGATTGAGGGTGATCATGTGGTAGCGGATATGGCGAGC GGCAAAGTGCTGAGGGGGGATTGCCTGTTGTACACCGTGGGGAGGCAAGG GAACACGGCGGGATTGTGCTTGGAAAAGACGGGTTTGGAGGTGAATAAAC GAGGGCTTTTGACGATCAATGATAACTATCAAACATCTGTCCCGTGGTTA TATGCCGCTGGCGATTGTATTGGATTTCCTGCCCTGGCCTCGACCTCCTC GCAGCAGGGGCGGATGGCGGCGCATCACATGTGGGGGGAGGAGGGGGAGG AGGCAAATAAGGCCTTTGGGGGTTTCCCGTATGGAATCTACACAATCCCG GAGATTTCGATGGTGGGCTACACGGAGCAGCAGTTAACACAGCAAAAGAT TCCCTATGAGATGGGCGTGGCGAGATATGATGAGTTGGCGAAGGGGCAGA TGATGGGGGGGAGTAATGGGATGTTGAAGATTTTGTTCCATGCGGAGACA TTGAAAATTTTGGGCGTGCATTGTATGGGTGAGAGTGCGACGGAAATTGT GCATGTGGGCCAAGTAGCGATGGATATGAATCTGGATATGCATTTTTTGA CGGAAAATGTTTTCAATTACCCGACATTTGCCGAGTCATATCGGGTGGCG GCGTTTAATGGATTGAAGAGGTTGGCCTTGGCGGGGTATACTGACTTGTC GGACCATGGGGCGGCGTCGTCGCCTTAA back to topprotein sequence of NO02G02010.1 >NO02G02010.1-protein ID=NO02G02010.1-protein|Name=NO02G02010.1|organism=Nannochloropsis oceanica|type=polypeptide|length=576bp MLMAAGSAVRRRLLPVVAGLPRVRLPIMSQQSCRAFANDSASKKDDEATT KVPIHPANANPFPTAGAHAGKPDFDLIVIGSGPAAQACAISSSRRGKRVA VIDKPGMLGGVCVNTGTIPSKTFREAVLHLTGYRHQGFYGKVYAPSDRIS MEGILHRVSMVVKGEKDVMRNRFRQYGITHIYGTAQFTGEEKSVQVTSAA LEIEDRKKEHAIGTPGAGLEVEPYSKPFTAEKMLVAVGTTPARRPDFEFD GVHIIDSDDLLSGSIQKVPRELIVVGAGVIGMEYASMFNVIPGSRVTVID GRPDILTFADKEIIQSLEYEMRQKGARFLLGEEVLSARIEGDHVVADMAS GKVLRGDCLLYTVGRQGNTAGLCLEKTGLEVNKRGLLTINDNYQTSVPWL YAAGDCIGFPALASTSSQQGRMAAHHMWGEEGEEANKAFGGFPYGIYTIP EISMVGYTEQQLTQQKIPYEMGVARYDELAKGQMMGGSNGMLKILFHAET LKILGVHCMGESATEIVHVGQVAMDMNLDMHFLTENVFNYPTFAESYRVA AFNGLKRLALAGYTDLSDHGAASSP* back to topmRNA from alignment at chr2:573246..575076- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO02G02010.1 ID=NO02G02010.1|Name=NO02G02010.1|organism=Nannochloropsis oceanica|type=mRNA|length=1831bp|location=Sequence derived from alignment at chr2:573246..575076- (Nannochloropsis oceanica) ATGCTGATGGCAGCTGGTAGCGCAGTCAGGAGACGTCTGCTACCTGTCGT
TGCGGGGCTACCGCGCGTCCGCCTCCCCATAATGTCCCAGCAGAGTTGCC
GTGCATTTGCCAACGACAGCGCCTCGAAAAAGGACGACGAGGCCACCACT
AAAGTCCCCATACATCCCGCCAACGCCAACCCCTTTCCCACCGCTGGTGC
GCATGCGGGCAAACCTGATTTTGATCTTATTGTAATAGGCTCTGGTCCAG
GTTAGTTAACTCATTTGAGTAGAGTAGGGTTTGATTTTGATTCGATTAAC
ATTCAACCGTCTCACTCCCTTCTCTCTCCCTCCCTCCTTCCTCACAATTA
CAGCCGCCCAAGCCTGCGCCATCTCTTCCAGCCGACGTGGCAAGAGGGTT
GCTGTCATTGACAAGCCCGGTATGCTTGGTGGGGTGTGCGTCAACACGGG
CACGATACCTAGCAAAACGTTTCGAGAGGCCGTCCTTCATCTGACGGGCT
ATCGGCACCAAGGCTTTTACGGCAAGGTCTACGCGCCATCGGATCGCATC
AGTATGGAGGGGATACTGCATCGTGTCTCAATGGTGGTAAAGGGCGAGAA
GGATGTGATGCGGAATCGTTTTCGGCAATACGGCATTACCCACATCTATG
GCACGGCACAATTTACGGGGGAAGAGAAGTCGGTGCAAGTCACCTCGGCG
GCCTTGGAGATTGAAGACCGAAAGAAAGAGCACGCCATAGGTACACCAGG
GGCGGGGCTTGAGGTGGAACCGTATAGCAAGCCGTTCACGGCGGAGAAGA
TGTTGGTGGCTGTGGGGACAACGCCAGCCCGCAGGCCCGATTTTGAATTT
GACGGGGTGCACATCATTGATAGTGATGATTTGCTCAGTGGGTCGATTCA
GAAGGTACCGCGGGAGCTGATTGTGGTGGGGGCGGGCGTGATTGGGATGG
AGTATGCGAGTATGTTTAATGTTATCCCCGGGTCGAGGGTAACGGTGATT
GATGGACGTCCGGATATCTTGACGTTCGCGGATAAAGAGATCATCCAGAG
CTTGGAATATGAAATGCGTCAGAAGGGGGCTCGGTTTTTGTTGGGGGAGG
AGGTGTTGAGTGCTCGGATTGAGGGTGATCATGTGGTAGCGGATATGGCG
AGCGGCAAAGTGCTGAGGGGGGATTGCCTGTTGTACACCGTGGGGAGGCA
AGGGAACACGGCGGGATTGTGCTTGGAAAAGACGGGTTTGGAGGTGAATA
AACGAGGGCTTTTGACGATCAATGATAACTATCAAACATCTGTCCCGTGG
TTATATGCCGCTGGCGATTGTATTGGATTTCCTGCCCTGGCCTCGACCTC
CTCGCAGCAGGGGCGGATGGCGGCGCATCACATGTGGGGGGAGGAGGGGG
AGGAGGCAAATAAGGCCTTTGGGGGTTTCCCGTATGGAATCTACACAATC
CCGGAGATTTCGATGGTGGGCTACACGGAGCAGCAGTTAACACAGCAAAA
GATTCCCTATGAGATGGGCGTGGCGAGATATGATGAGTTGGCGAAGGGGC
AGATGATGGGGGGGAGTAATGGGATGTTGAAGATTTTGTTCCATGCGGAG
ACATTGAAAATTTTGGGCGTGCATTGTATGGGTGAGAGTGCGACGGAAAT
TGTGCATGTGGGCCAAGTAGCGATGGATATGAATCTGGATATGCATTTTT
TGACGGAAAATGTTTTCAATTACCCGACATTTGCCGAGTCATATCGGGTG
GCGGCGTTTAATGGATTGAAGAGGTTGGCCTTGGCGGGGTATACTGACTT
GTCGGACCATGGGGCGGCGTCGTCGCCTTAA back to topCoding sequence (CDS) from alignment at chr2:573246..575076- >NO02G02010.1 ID=NO02G02010.1|Name=NO02G02010.1|organism=Nannochloropsis oceanica|type=CDS|length=1728bp|location=Sequence derived from alignment at chr2:573246..575076- (Nannochloropsis oceanica) ATGCTGATGGCAGCTGGTAGCGCAGTCAGGAGACGTCTGCTACCTGTCGT TGCGGGGCTACCGCGCGTCCGCCTCCCCATAATGTCCCAGCAGAGTTGCC GTGCATTTGCCAACGACAGCGCCTCGAAAAAGGACGACGAGGCCACCACT AAAGTCCCCATACATCCCGCCAACGCCAACCCCTTTCCCACCGCTGGTGC GCATGCGGGCAAACCTGATTTTGATCTTATTGTAATAGGCTCTGGTCCAG CCGCCCAAGCCTGCGCCATCTCTTCCAGCCGACGTGGCAAGAGGGTTGCT GTCATTGACAAGCCCGGTATGCTTGGTGGGGTGTGCGTCAACACGGGCAC GATACCTAGCAAAACGTTTCGAGAGGCCGTCCTTCATCTGACGGGCTATC GGCACCAAGGCTTTTACGGCAAGGTCTACGCGCCATCGGATCGCATCAGT ATGGAGGGGATACTGCATCGTGTCTCAATGGTGGTAAAGGGCGAGAAGGA TGTGATGCGGAATCGTTTTCGGCAATACGGCATTACCCACATCTATGGCA CGGCACAATTTACGGGGGAAGAGAAGTCGGTGCAAGTCACCTCGGCGGCC TTGGAGATTGAAGACCGAAAGAAAGAGCACGCCATAGGTACACCAGGGGC GGGGCTTGAGGTGGAACCGTATAGCAAGCCGTTCACGGCGGAGAAGATGT TGGTGGCTGTGGGGACAACGCCAGCCCGCAGGCCCGATTTTGAATTTGAC GGGGTGCACATCATTGATAGTGATGATTTGCTCAGTGGGTCGATTCAGAA GGTACCGCGGGAGCTGATTGTGGTGGGGGCGGGCGTGATTGGGATGGAGT ATGCGAGTATGTTTAATGTTATCCCCGGGTCGAGGGTAACGGTGATTGAT GGACGTCCGGATATCTTGACGTTCGCGGATAAAGAGATCATCCAGAGCTT GGAATATGAAATGCGTCAGAAGGGGGCTCGGTTTTTGTTGGGGGAGGAGG TGTTGAGTGCTCGGATTGAGGGTGATCATGTGGTAGCGGATATGGCGAGC GGCAAAGTGCTGAGGGGGGATTGCCTGTTGTACACCGTGGGGAGGCAAGG GAACACGGCGGGATTGTGCTTGGAAAAGACGGGTTTGGAGGTGAATAAAC GAGGGCTTTTGACGATCAATGATAACTATCAAACATCTGTCCCGTGGTTA TATGCCGCTGGCGATTGTATTGGATTTCCTGCCCTGGCCTCGACCTCCTC GCAGCAGGGGCGGATGGCGGCGCATCACATGTGGGGGGAGGAGGGGGAGG AGGCAAATAAGGCCTTTGGGGGTTTCCCGTATGGAATCTACACAATCCCG GAGATTTCGATGGTGGGCTACACGGAGCAGCAGTTAACACAGCAAAAGAT TCCCTATGAGATGGGCGTGGCGAGATATGATGAGTTGGCGAAGGGGCAGA TGATGGGGGGGAGTAATGGGATGTTGAAGATTTTGTTCCATGCGGAGACA TTGAAAATTTTGGGCGTGCATTGTATGGGTGAGAGTGCGACGGAAATTGT GCATGTGGGCCAAGTAGCGATGGATATGAATCTGGATATGCATTTTTTGA CGGAAAATGTTTTCAATTACCCGACATTTGCCGAGTCATATCGGGTGGCG GCGTTTAATGGATTGAAGAGGTTGGCCTTGGCGGGGTATACTGACTTGTC GGACCATGGGGCGGCGTCGTCGCCTTAA back to top
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