NO02G01730.1, NO02G01730.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO02G01730.1
Unique NameNO02G01730.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3609
Alignment locationchr2:506049..509809 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:506049..509809 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
[Close]
BLAST of NO02G01730.1 vs.
Match: EWM30494.1 (hypothetical protein Naga_100013g29 [Nannochloropsis gaditana])

HSP 1 Score: 379.4 bits (973), Expect = 4.100e-101
Identity = 385/1000 (38.50%), Postives = 485/1000 (48.50%), Query Frame = 0 
Query:  249 QQQQQQQQQQQQQQQQQQQQQQRQQIHPRPIHPQTATGAAPPHPPLPPLFHRPPPPCSSTPEGGNAGPAGKEPHQSAATVGAAAAADEALRAALAKLQEENSNLRTHNFDLSASLVMEEAEQSRLRQEMKRLESECAFMAQDVKEADRMRVRMEQQQQFLQQQHQQQQLQEVATSGNSSSSSSISSSSSSIGGYCTNKKRKITTTGKEGREDECHQVVPGGGGGVVLSTRGGGAAAAVTKATTTTKTAAAAAAQTERGPQQAEEKEDEDEDEGEEPAEEELLLLRDPAPSAVLALQEMVESLCLLLGSSSSSSKIEGGFGYSDGGSNTGVGRRAGGPPRSPSRGFWDRFS-----SSLRSDSLPHFLPPAHQHLLHGIISDRTRAPTTAAATGAAAAATPVVGTVTLSRHSTSIRNDCSWSSNSSSTSSTSDLVEGEERDSDGLVALTTASQLCLSLWPPSMSSMSSSSSS------------TPSSLLSILYSLGAVLPHVHTLGPTKVIAALRVSRCLLISCPAETRRTLLVNGEGGRPEGVEVAMEGEGVGEGGSAAGATSDAAAATCSLLGRFQGSKIKSELLLWAAEGGRKGVTEGGRHSSSCNNSSRGVTCSNNRSGSRGPPPFLGQLMGFIDYLGKQWREIVSPSFSPSNSSNDNGSSGNMPVAPSISPLLFRMTTEALTTLLVLAQDHTFSPSSLPPSFSSSSSRCWASTWLSGPSLPFLLDGALRIRDVELVDLCIQLLHCLSQSSGAFFDQMAKLRGGGFLPEVACRVLDWHLEVRIKEEEGRQGGRA----------------------EKVGR-----SNSRSFSYGKDVHRLCLRLIRLLSRVCASYGTTGVHLFLRIPLRGPPGTNDNGSSYSDSYRNNEGGKKSGDRLLPLLVRTVHQEVEGLLTRRG----------QGGVRLRRMLARESFALLSLLSANHPGGVIAGLNGSGCRWTLEAVNFRLMNRLVEGLEDLMEDAENL 1195
            Q Q   Q Q  + +++ Q  QQ+QQ   +P   Q       PH                          G   HQ     G A+AA ++LRAAL  LQEEN+NLRTHNFDLSASLVMEEAEQSRLRQ+MK+LESE AFMAQ+V+EADRMR R E++++  +QQH  Q             S S  S +   G     KKR+I      GRED           G+  S RG   A+ +++     +     A    R  + +   +   E+      EE L  L+ P PS  L LQ +VESLCLLL + +                     RR     R     +   F      S + + SL H  P   +H           A     ATG           V LS  S         SS +   S    L  G+    +  +A + A+QL LSLWP S S   S S+S            + S LL I+ SLGA+ P +H LG  KV+AALRV+RCLL  CP E+R   LV+G G   EG     +G              D    + S + RFQGSK+ +ELL WAA GG  G  EG R   S N  + G               FL +L+  ID++G+ W++       PS  S D          PS  PLL +MT+EAL  LLVL Q+     SSL  SF  SS  CWA+ WL  P+LP LL+GALR R VELVDLC+QL H LSQ S   F  +A L+ G FL  VAC+V DWHLE      EG++G RA                      E V R     S + S      + RLCLR+ R LSRVC SYGT+ VH+FL  PL      ++   +Y  S  + + G ++G  +L  LV  VHQ +  LL R G          Q   +L+RMLARESF LLSLLSAN+P G+ AGL+GSGCRWTLEAVNFRLMN LVEGLEDL ++AENL
Sbjct:   68 QAQPGSQPQIPRPRREGQVHQQQQQQRQQPQQQQQQQQQQQPHQDRQ----------------------GHSQHQE----GDASAAIDSLRAALVVLQEENANLRTHNFDLSASLVMEEAEQSRLRQDMKKLESEKAFMAQEVREADRMRARAEKEKELQRQQHCNQP------GAREEMSLSSGSGNEQEGMGKKEKKRRIV-----GRED-----------GLSASGRG---ASQLSEHKEIGREEMEDAGPDGRKNETSTASDAIVEENDLHACEEALAALKCPVPSTSLVLQSLVESLCLLLSTGTPHV------------------RRNNEDTRQMECWWSSAFKEETGHSQVLARSLGHNFPTHVRHF-------GKEADGATEATGGRRF-------VPLSAFS---------SSGTCDASIREGLTNGDNSTMNCSIASSMATQLYLSLWPISSSLFFSPSTSHLMPDVQQDTDMSSSMLLPIIQSLGAMFPQMHALGTDKVVAALRVARCLLSLCPGESREMALVSG-GHENEGENADRKG--------------DKDTCSSSFMQRFQGSKVDAELLRWAATGGMDG--EGARQGGSGNKEAIG--------------SFLNRLLELIDWVGEHWKD-----GHPSYDSTD----------PSF-PLL-QMTSEALAVLLVLCQERNGCFSSLG-SFGFSS--CWATAWLRRPTLPLLLEGALRARHVELVDLCLQLTHALSQQSPRLFQALAGLKSGAFLSNVACQVFDWHLESMTWPIEGKRGRRARSGETIPFEYKGEKRTSQIDGCEMVPRKSRLQSPTSSPHSASGLERLCLRMTRFLSRVCISYGTSAVHVFLHAPL-----LDNEDKNY--SLNHTDTGMQNG-HILARLVGVVHQAIHRLLRRTGNPSFFPSDTSQEQWQLQRMLARESFELLSLLSANNPAGLSAGLDGSGCRWTLEAVNFRLMNSLVEGLEDLTDEAENL 916
The following BLAST results are available for this feature:
BLAST of NO02G01730.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM30494.14.100e-10138.50hypothetical protein Naga_100013g29 [Nannochlorops... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G01730NO02G01730Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO02G01730.1NO02G01730.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO02G01730.1.cds1NO02G01730.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G01730.1.cds2NO02G01730.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO02G01730.1 ID=NO02G01730.1|Name=NO02G01730.1|organism=Nannochloropsis oceanica|type=mRNA|length=3609bp
ATGGTCAACAACGAACAGCAGCGTCACCACCAGCCGCCGGTGTTGCAGCT
CCAAAAAACGACGACGACGCGGCGAACCACAGTCGGTGTCACCAACAACG
GGAGTGGCAACATCTTTAGTCAGGGCAGCAATGGCAGTGCTAGCCAGATC
ACCAACATTAACCCCTACACGGTTCCCGGCGCGACGCGTATGATTGTCTC
GGACCCTCGTGGGAGTGCAGTGGCCAGTCGAGGGGAAAGTGAAGGTGGAG
GGCGGGGCACGGGCGGCGGCCTCGTCTTTATACCCACCGCAGGCGGAGAA
GGCAAAGGAGGTGGAGGAATGGTAAGACAGCAGCATCAGCAGCAGCAGCA
GCAGCAGCAGCAGCATCAGCATTATCATTATGACGATCATCATCAACAAC
AACAACAACAAGAACAACAACAACAACAAGAACAACAACAACAACAAGAA
CAACAACAACAACAGCAACAACAACAACAACAACAACAACAACAACAACA
ACAACATGTCTCACGGGCCATGGGCAAATATATTTCACCGGGGGGGCCTC
GCCCTGTGCGAGGAGGTACGCTGCCCCTCTCTCAGTCAGGAGGAGGGGGA
GGAGGAGGAGGAAAACCAGGCGAACTAACTTTTACCAGCCAGAATCAACG
CCGCGTCCCCATGGTCGCTCGCCCACCTTATGCTGCTTTACCAGCAGCAG
CCAATGTACCAGCCTACCGCCCTGCTCAACGGTCGGGCACGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAGCAACA
GCAGCAGCAGCGGCAGCAAATTCATCCTCGGCCCATTCATCCGCAGACTG
CCACCGGTGCTGCACCCCCCCATCCTCCTCTTCCTCCTCTTTTTCACCGT
CCTCCTCCTCCATGCTCCAGCACTCCTGAGGGTGGAAACGCAGGACCAGC
AGGGAAAGAGCCACACCAATCCGCAGCAACTGTAGGTGCAGCAGCTGCGG
CAGATGAGGCTTTGCGAGCAGCCTTGGCAAAATTACAAGAAGAAAATTCG
AACTTACGCACACATAATTTCGACTTGAGTGCCTCTTTGGTGATGGAGGA
AGCGGAACAATCACGCTTGAGACAGGAGATGAAACGCTTGGAGAGCGAAT
GTGCCTTCATGGCTCAGGACGTCAAGGAGGCGGATCGAATGCGTGTTAGA
ATGGAGCAGCAGCAGCAGTTCTTGCAGCAGCAGCATCAACAGCAGCAGCT
GCAGGAGGTGGCAACTAGTGGTAATAGTAGTAGTAGTAGTAGTATTAGTA
GTAGTAGTAGTAGTATTGGAGGATATTGCACGAACAAGAAGCGAAAGATC
ACCACTACGGGCAAGGAAGGGAGGGAGGACGAATGTCATCAGGTTGTTCC
TGGAGGAGGAGGAGGTGTAGTGCTATCAACTAGAGGAGGAGGAGCAGCTG
CAGCAGTGACAAAAGCGACAACAACGACAAAAACGGCAGCAGCAGCAGCG
GCGCAGACAGAAAGAGGACCTCAGCAAGCGGAAGAGAAGGAGGACGAGGA
CGAGGACGAGGGCGAGGAGCCAGCGGAGGAAGAGCTGCTGCTACTACGCG
ACCCTGCCCCTTCCGCTGTCCTCGCCCTCCAAGAAATGGTGGAAAGCCTC
TGCCTCCTCCTTGGGAGCAGCAGCAGTAGTAGCAAGATTGAAGGTGGATT
TGGCTACAGCGATGGTGGGAGTAACACAGGTGTGGGAAGGAGGGCTGGAG
GTCCACCTCGTTCCCCCTCCCGGGGTTTCTGGGATCGTTTCTCCTCCAGT
CTCCGTTCCGACTCCCTCCCTCATTTCCTGCCTCCTGCACACCAGCACCT
CCTCCACGGCATTATTTCGGACAGAACACGTGCTCCCACTACTGCTGCTG
CTACAGGAGCTGCTGCAGCTGCCACACCTGTCGTTGGAACGGTGACTCTT
TCTAGGCACAGTACCAGCATTCGCAACGACTGTAGCTGGAGCAGTAACAG
CAGCAGCACTAGTAGCACTAGCGACTTAGTGGAAGGAGAGGAACGAGATT
CCGACGGTCTCGTGGCCCTCACCACGGCCTCCCAACTCTGCCTGTCCCTG
TGGCCCCCCTCCATGTCCTCCATGTCCTCCTCTTCCTCAAGCACCCCGTC
CTCCCTCCTCTCCATCCTTTATTCCTTGGGCGCTGTCCTCCCTCATGTTC
ACACGCTGGGCCCTACCAAGGTAATAGCAGCATTAAGAGTCTCTCGCTGT
CTCCTCATTTCATGCCCCGCCGAAACCCGGCGGACATTACTCGTGAATGG
AGAGGGAGGGAGGCCGGAAGGGGTCGAGGTGGCAATGGAGGGAGAGGGAG
TTGGGGAAGGTGGGTCTGCTGCTGGTGCAACTAGTGATGCTGCTGCTGCC
ACGTGTTCTCTTCTGGGACGATTTCAAGGATCGAAGATAAAGTCGGAGTT
GCTGCTTTGGGCGGCGGAGGGAGGGAGGAAGGGAGTGACGGAGGGTGGGC
GACACAGCAGCAGTTGTAACAACAGTAGCAGAGGTGTTACATGTAGCAAC
AACAGAAGTGGTAGCAGAGGTCCTCCTCCCTTTCTAGGTCAGCTTATGGG
TTTCATCGACTACCTCGGGAAACAGTGGAGGGAAATTGTTTCCCCCTCCT
TCTCCCCTTCCAACAGCAGCAACGACAACGGCAGCAGCGGCAACATGCCC
GTTGCTCCTTCTATCTCTCCCCTACTCTTCCGCATGACCACGGAGGCCCT
CACCACCCTCCTCGTTCTCGCACAAGACCATACCTTCTCTCCCTCCTCCC
TTCCTCCCTCCTTCTCCTCCTCCTCCTCCCGCTGCTGGGCTAGCACCTGG
CTCTCTGGCCCCTCTCTTCCCTTTTTGCTGGACGGAGCCTTGCGAATTAG
AGACGTCGAGTTGGTTGATTTGTGTATCCAATTGCTTCATTGTCTCTCTC
AGTCCTCGGGGGCATTTTTTGACCAGATGGCAAAGTTGAGAGGGGGGGGA
TTTCTGCCAGAGGTGGCTTGTCGCGTGCTGGATTGGCATTTGGAGGTCAG
AATCAAGGAAGAGGAAGGGAGGCAGGGGGGGAGGGCAGAAAAGGTGGGGC
GGTCAAACTCGCGCTCCTTCTCATACGGGAAGGACGTTCACCGTCTATGC
CTACGTCTTATTCGCCTACTCTCTCGAGTCTGTGCGTCTTATGGCACCAC
AGGCGTGCACCTGTTCCTCCGTATACCCCTTCGTGGCCCGCCTGGGACGA
ATGACAACGGTAGCAGCTACAGCGACAGCTACAGGAACAACGAGGGAGGG
AAAAAGAGCGGTGACCGTCTCCTCCCCCTACTCGTCAGGACGGTGCACCA
AGAAGTGGAAGGCCTGCTGACCCGGAGGGGGCAGGGCGGGGTGCGTTTAC
GGCGAATGCTGGCACGAGAGAGCTTTGCCCTCTTGTCCTTATTGAGTGCC
AATCATCCAGGGGGGGTAATCGCCGGCCTTAACGGATCAGGATGCAGGTG
GACGTTGGAAGCTGTTAATTTTCGGCTGATGAACCGGCTGGTGGAGGGGC
TGGAGGACTTAATGGAGGATGCAGAAAACCTTTCTTGCCTTCCCATGTCT
GACCTCTGA
back to top

protein sequence of NO02G01730.1

>NO02G01730.1-protein ID=NO02G01730.1-protein|Name=NO02G01730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1203bp
MVNNEQQRHHQPPVLQLQKTTTTRRTTVGVTNNGSGNIFSQGSNGSASQI
TNINPYTVPGATRMIVSDPRGSAVASRGESEGGGRGTGGGLVFIPTAGGE
GKGGGGMVRQQHQQQQQQQQQHQHYHYDDHHQQQQQQEQQQQQEQQQQQE
QQQQQQQQQQQQQQQQQQHVSRAMGKYISPGGPRPVRGGTLPLSQSGGGG
GGGGKPGELTFTSQNQRRVPMVARPPYAALPAAANVPAYRPAQRSGTQQQ
QQQQQQQQQQQQQQQQQQQQRQQIHPRPIHPQTATGAAPPHPPLPPLFHR
PPPPCSSTPEGGNAGPAGKEPHQSAATVGAAAAADEALRAALAKLQEENS
NLRTHNFDLSASLVMEEAEQSRLRQEMKRLESECAFMAQDVKEADRMRVR
MEQQQQFLQQQHQQQQLQEVATSGNSSSSSSISSSSSSIGGYCTNKKRKI
TTTGKEGREDECHQVVPGGGGGVVLSTRGGGAAAAVTKATTTTKTAAAAA
AQTERGPQQAEEKEDEDEDEGEEPAEEELLLLRDPAPSAVLALQEMVESL
CLLLGSSSSSSKIEGGFGYSDGGSNTGVGRRAGGPPRSPSRGFWDRFSSS
LRSDSLPHFLPPAHQHLLHGIISDRTRAPTTAAATGAAAAATPVVGTVTL
SRHSTSIRNDCSWSSNSSSTSSTSDLVEGEERDSDGLVALTTASQLCLSL
WPPSMSSMSSSSSSTPSSLLSILYSLGAVLPHVHTLGPTKVIAALRVSRC
LLISCPAETRRTLLVNGEGGRPEGVEVAMEGEGVGEGGSAAGATSDAAAA
TCSLLGRFQGSKIKSELLLWAAEGGRKGVTEGGRHSSSCNNSSRGVTCSN
NRSGSRGPPPFLGQLMGFIDYLGKQWREIVSPSFSPSNSSNDNGSSGNMP
VAPSISPLLFRMTTEALTTLLVLAQDHTFSPSSLPPSFSSSSSRCWASTW
LSGPSLPFLLDGALRIRDVELVDLCIQLLHCLSQSSGAFFDQMAKLRGGG
FLPEVACRVLDWHLEVRIKEEEGRQGGRAEKVGRSNSRSFSYGKDVHRLC
LRLIRLLSRVCASYGTTGVHLFLRIPLRGPPGTNDNGSSYSDSYRNNEGG
KKSGDRLLPLLVRTVHQEVEGLLTRRGQGGVRLRRMLARESFALLSLLSA
NHPGGVIAGLNGSGCRWTLEAVNFRLMNRLVEGLEDLMEDAENLSCLPMS
DL*
back to top

mRNA from alignment at chr2:506049..509809+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO02G01730.1 ID=NO02G01730.1|Name=NO02G01730.1|organism=Nannochloropsis oceanica|type=mRNA|length=3761bp|location=Sequence derived from alignment at chr2:506049..509809+ (Nannochloropsis oceanica)
ATGGTCAACAACGAACAGCAGCGTCACCACCAGCCGCCGGTGTTGCAGCT
CCAAAAAACGACGACGACGCGGCGAACCACAGTCGGTGTCACCAACAACG
GGAGTGGCAACATCTTTAGTCAGGGCAGCAATGGCAGTGCTAGCCAGATC
ACCAACATTAACCCCTACACGGTTCCCGGCGCGACGCGTATGATTGTCTC
GGACCCTCGTGGGAGTGCAGTGGCCAGTCGAGGGGAAAGTGAAGGTGGAG
GGCGGGGCACGGGCGGCGGCCTCGTCTTTATACCCACCGCAGGCGGAGAA
GGCAAAGGAGGTGGAGGAATGGTAAGACAGCAGCATCAGCAGCAGCAGCA
GCAGCAGCAGCAGCATCAGCATTATCATTATGACGATCATCATCAACAAC
AACAACAACAAGAACAACAACAACAACAAGAACAACAACAACAACAAGAA
CAACAACAACAACAGCAACAACAACAACAACAACAACAACAACAACAACA
ACAACATGTCTCACGGGCCATGGGCAAATATATTTCACCGGGGGGGCCTC
GCCCTGTGCGAGGAGGTACGCTGCCCCTCTCTCAGTCAGGAGGAGGGGGA
GGAGGAGGAGGAAAACCAGGCGAACTAACTTTTACCAGCCAGAATCAACG
CCGCGTCCCCATGGTCGCTCGCCCACCTTATGCTGCTTTACCAGCAGCAG
CCAATGTACCAGCCTACCGCCCTGCTCAACGGTCGGGCACGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAGCAACA
GCAGCAGCAGCGGCAGCAAATTCATCCTCGGCCCATTCATCCGCAGACTG
CCACCGGTGCTGCACCCCCCCATCCTCCTCTTCCTCCTCTTTTTCACCGT
CCTCCTCCTCCATGCTCCAGCACTGTATACCCCTCTGCGCCCCTCCCTCC
CAAGTCCTACCCTACTGGCACCCAACCCTACCGCCCAATTAGTAGCCGCC
TTCCTTCCCTCCCCCCCCCCCCCCGCCTACATCCGAGCCCCGCAACACCA
GCACGGGTGTTGCCTCCCTCTTACAGCCTGAGGGTGGAAACGCAGGACCA
GCAGGGAAAGAGCCACACCAATCCGCAGCAACTGTAGGTGCAGCAGCTGC
GGCAGATGAGGCTTTGCGAGCAGCCTTGGCAAAATTACAAGAAGAAAATT
CGAACTTACGCACACATAATTTCGACTTGAGTGCCTCTTTGGTGATGGAG
GAAGCGGAACAATCACGCTTGAGACAGGAGATGAAACGCTTGGAGAGCGA
ATGTGCCTTCATGGCTCAGGACGTCAAGGAGGCGGATCGAATGCGTGTTA
GAATGGAGCAGCAGCAGCAGTTCTTGCAGCAGCAGCATCAACAGCAGCAG
CTGCAGGAGGTGGCAACTAGTGGTAATAGTAGTAGTAGTAGTAGTATTAG
TAGTAGTAGTAGTAGTATTGGAGGATATTGCACGAACAAGAAGCGAAAGA
TCACCACTACGGGCAAGGAAGGGAGGGAGGACGAATGTCATCAGGTTGTT
CCTGGAGGAGGAGGAGGTGTAGTGCTATCAACTAGAGGAGGAGGAGCAGC
TGCAGCAGTGACAAAAGCGACAACAACGACAAAAACGGCAGCAGCAGCAG
CGGCGCAGACAGAAAGAGGACCTCAGCAAGCGGAAGAGAAGGAGGACGAG
GACGAGGACGAGGGCGAGGAGCCAGCGGAGGAAGAGCTGCTGCTACTACG
CGACCCTGCCCCTTCCGCTGTCCTCGCCCTCCAAGAAATGGTGGAAAGCC
TCTGCCTCCTCCTTGGGAGCAGCAGCAGTAGTAGCAAGATTGAAGGTGGA
TTTGGCTACAGCGATGGTGGGAGTAACACAGGTGTGGGAAGGAGGGCTGG
AGGTCCACCTCGTTCCCCCTCCCGGGGTTTCTGGGATCGTTTCTCCTCCA
GTCTCCGTTCCGACTCCCTCCCTCATTTCCTGCCTCCTGCACACCAGCAC
CTCCTCCACGGCATTATTTCGGACAGAACACGTGCTCCCACTACTGCTGC
TGCTACAGGAGCTGCTGCAGCTGCCACACCTGTCGTTGGAACGGTGACTC
TTTCTAGGCACAGTACCAGCATTCGCAACGACTGTAGCTGGAGCAGTAAC
AGCAGCAGCACTAGTAGCACTAGCGACTTAGTGGAAGGAGAGGAACGAGA
TTCCGACGGTCTCGTGGCCCTCACCACGGCCTCCCAACTCTGCCTGTCCC
TGTGGCCCCCCTCCATGTCCTCCATGTCCTCCTCTTCCTCAAGCACCCCG
TCCTCCCTCCTCTCCATCCTTTATTCCTTGGGCGCTGTCCTCCCTCATGT
TCACACGCTGGGCCCTACCAAGGTAATAGCAGCATTAAGAGTCTCTCGCT
GTCTCCTCATTTCATGCCCCGCCGAAACCCGGCGGACATTACTCGTGAAT
GGAGAGGGAGGGAGGCCGGAAGGGGTCGAGGTGGCAATGGAGGGAGAGGG
AGTTGGGGAAGGTGGGTCTGCTGCTGGTGCAACTAGTGATGCTGCTGCTG
CCACGTGTTCTCTTCTGGGACGATTTCAAGGATCGAAGATAAAGTCGGAG
TTGCTGCTTTGGGCGGCGGAGGGAGGGAGGAAGGGAGTGACGGAGGGTGG
GCGACACAGCAGCAGTTGTAACAACAGTAGCAGAGGTGTTACATGTAGCA
ACAACAGAAGTGGTAGCAGAGGTCCTCCTCCCTTTCTAGGTCAGCTTATG
GGTTTCATCGACTACCTCGGGAAACAGTGGAGGGAAATTGTTTCCCCCTC
CTTCTCCCCTTCCAACAGCAGCAACGACAACGGCAGCAGCGGCAACATGC
CCGTTGCTCCTTCTATCTCTCCCCTACTCTTCCGCATGACCACGGAGGCC
CTCACCACCCTCCTCGTTCTCGCACAAGACCATACCTTCTCTCCCTCCTC
CCTTCCTCCCTCCTTCTCCTCCTCCTCCTCCCGCTGCTGGGCTAGCACCT
GGCTCTCTGGCCCCTCTCTTCCCTTTTTGCTGGACGGAGCCTTGCGAATT
AGAGACGTCGAGTTGGTTGATTTGTGTATCCAATTGCTTCATTGTCTCTC
TCAGTCCTCGGGGGCATTTTTTGACCAGATGGCAAAGTTGAGAGGGGGGG
GATTTCTGCCAGAGGTGGCTTGTCGCGTGCTGGATTGGCATTTGGAGGTC
AGAATCAAGGAAGAGGAAGGGAGGCAGGGGGGGAGGGCAGAAAAGGTGGG
GCGGTCAAACTCGCGCTCCTTCTCATACGGGAAGGACGTTCACCGTCTAT
GCCTACGTCTTATTCGCCTACTCTCTCGAGTCTGTGCGTCTTATGGCACC
ACAGGCGTGCACCTGTTCCTCCGTATACCCCTTCGTGGCCCGCCTGGGAC
GAATGACAACGGTAGCAGCTACAGCGACAGCTACAGGAACAACGAGGGAG
GGAAAAAGAGCGGTGACCGTCTCCTCCCCCTACTCGTCAGGACGGTGCAC
CAAGAAGTGGAAGGCCTGCTGACCCGGAGGGGGCAGGGCGGGGTGCGTTT
ACGGCGAATGCTGGCACGAGAGAGCTTTGCCCTCTTGTCCTTATTGAGTG
CCAATCATCCAGGGGGGGTAATCGCCGGCCTTAACGGATCAGGATGCAGG
TGGACGTTGGAAGCTGTTAATTTTCGGCTGATGAACCGGCTGGTGGAGGG
GCTGGAGGACTTAATGGAGGATGCAGAAAACCTTTCTTGCCTTCCCATGT
CTGACCTCTGA
back to top

Coding sequence (CDS) from alignment at chr2:506049..509809+

>NO02G01730.1 ID=NO02G01730.1|Name=NO02G01730.1|organism=Nannochloropsis oceanica|type=CDS|length=3609bp|location=Sequence derived from alignment at chr2:506049..509809+ (Nannochloropsis oceanica)
ATGGTCAACAACGAACAGCAGCGTCACCACCAGCCGCCGGTGTTGCAGCT
CCAAAAAACGACGACGACGCGGCGAACCACAGTCGGTGTCACCAACAACG
GGAGTGGCAACATCTTTAGTCAGGGCAGCAATGGCAGTGCTAGCCAGATC
ACCAACATTAACCCCTACACGGTTCCCGGCGCGACGCGTATGATTGTCTC
GGACCCTCGTGGGAGTGCAGTGGCCAGTCGAGGGGAAAGTGAAGGTGGAG
GGCGGGGCACGGGCGGCGGCCTCGTCTTTATACCCACCGCAGGCGGAGAA
GGCAAAGGAGGTGGAGGAATGGTAAGACAGCAGCATCAGCAGCAGCAGCA
GCAGCAGCAGCAGCATCAGCATTATCATTATGACGATCATCATCAACAAC
AACAACAACAAGAACAACAACAACAACAAGAACAACAACAACAACAAGAA
CAACAACAACAACAGCAACAACAACAACAACAACAACAACAACAACAACA
ACAACATGTCTCACGGGCCATGGGCAAATATATTTCACCGGGGGGGCCTC
GCCCTGTGCGAGGAGGTACGCTGCCCCTCTCTCAGTCAGGAGGAGGGGGA
GGAGGAGGAGGAAAACCAGGCGAACTAACTTTTACCAGCCAGAATCAACG
CCGCGTCCCCATGGTCGCTCGCCCACCTTATGCTGCTTTACCAGCAGCAG
CCAATGTACCAGCCTACCGCCCTGCTCAACGGTCGGGCACGCAGCAGCAG
CAGCAGCAGCAGCAGCAGCAGCAGCAACAACAACAACAACAACAGCAACA
GCAGCAGCAGCGGCAGCAAATTCATCCTCGGCCCATTCATCCGCAGACTG
CCACCGGTGCTGCACCCCCCCATCCTCCTCTTCCTCCTCTTTTTCACCGT
CCTCCTCCTCCATGCTCCAGCACTCCTGAGGGTGGAAACGCAGGACCAGC
AGGGAAAGAGCCACACCAATCCGCAGCAACTGTAGGTGCAGCAGCTGCGG
CAGATGAGGCTTTGCGAGCAGCCTTGGCAAAATTACAAGAAGAAAATTCG
AACTTACGCACACATAATTTCGACTTGAGTGCCTCTTTGGTGATGGAGGA
AGCGGAACAATCACGCTTGAGACAGGAGATGAAACGCTTGGAGAGCGAAT
GTGCCTTCATGGCTCAGGACGTCAAGGAGGCGGATCGAATGCGTGTTAGA
ATGGAGCAGCAGCAGCAGTTCTTGCAGCAGCAGCATCAACAGCAGCAGCT
GCAGGAGGTGGCAACTAGTGGTAATAGTAGTAGTAGTAGTAGTATTAGTA
GTAGTAGTAGTAGTATTGGAGGATATTGCACGAACAAGAAGCGAAAGATC
ACCACTACGGGCAAGGAAGGGAGGGAGGACGAATGTCATCAGGTTGTTCC
TGGAGGAGGAGGAGGTGTAGTGCTATCAACTAGAGGAGGAGGAGCAGCTG
CAGCAGTGACAAAAGCGACAACAACGACAAAAACGGCAGCAGCAGCAGCG
GCGCAGACAGAAAGAGGACCTCAGCAAGCGGAAGAGAAGGAGGACGAGGA
CGAGGACGAGGGCGAGGAGCCAGCGGAGGAAGAGCTGCTGCTACTACGCG
ACCCTGCCCCTTCCGCTGTCCTCGCCCTCCAAGAAATGGTGGAAAGCCTC
TGCCTCCTCCTTGGGAGCAGCAGCAGTAGTAGCAAGATTGAAGGTGGATT
TGGCTACAGCGATGGTGGGAGTAACACAGGTGTGGGAAGGAGGGCTGGAG
GTCCACCTCGTTCCCCCTCCCGGGGTTTCTGGGATCGTTTCTCCTCCAGT
CTCCGTTCCGACTCCCTCCCTCATTTCCTGCCTCCTGCACACCAGCACCT
CCTCCACGGCATTATTTCGGACAGAACACGTGCTCCCACTACTGCTGCTG
CTACAGGAGCTGCTGCAGCTGCCACACCTGTCGTTGGAACGGTGACTCTT
TCTAGGCACAGTACCAGCATTCGCAACGACTGTAGCTGGAGCAGTAACAG
CAGCAGCACTAGTAGCACTAGCGACTTAGTGGAAGGAGAGGAACGAGATT
CCGACGGTCTCGTGGCCCTCACCACGGCCTCCCAACTCTGCCTGTCCCTG
TGGCCCCCCTCCATGTCCTCCATGTCCTCCTCTTCCTCAAGCACCCCGTC
CTCCCTCCTCTCCATCCTTTATTCCTTGGGCGCTGTCCTCCCTCATGTTC
ACACGCTGGGCCCTACCAAGGTAATAGCAGCATTAAGAGTCTCTCGCTGT
CTCCTCATTTCATGCCCCGCCGAAACCCGGCGGACATTACTCGTGAATGG
AGAGGGAGGGAGGCCGGAAGGGGTCGAGGTGGCAATGGAGGGAGAGGGAG
TTGGGGAAGGTGGGTCTGCTGCTGGTGCAACTAGTGATGCTGCTGCTGCC
ACGTGTTCTCTTCTGGGACGATTTCAAGGATCGAAGATAAAGTCGGAGTT
GCTGCTTTGGGCGGCGGAGGGAGGGAGGAAGGGAGTGACGGAGGGTGGGC
GACACAGCAGCAGTTGTAACAACAGTAGCAGAGGTGTTACATGTAGCAAC
AACAGAAGTGGTAGCAGAGGTCCTCCTCCCTTTCTAGGTCAGCTTATGGG
TTTCATCGACTACCTCGGGAAACAGTGGAGGGAAATTGTTTCCCCCTCCT
TCTCCCCTTCCAACAGCAGCAACGACAACGGCAGCAGCGGCAACATGCCC
GTTGCTCCTTCTATCTCTCCCCTACTCTTCCGCATGACCACGGAGGCCCT
CACCACCCTCCTCGTTCTCGCACAAGACCATACCTTCTCTCCCTCCTCCC
TTCCTCCCTCCTTCTCCTCCTCCTCCTCCCGCTGCTGGGCTAGCACCTGG
CTCTCTGGCCCCTCTCTTCCCTTTTTGCTGGACGGAGCCTTGCGAATTAG
AGACGTCGAGTTGGTTGATTTGTGTATCCAATTGCTTCATTGTCTCTCTC
AGTCCTCGGGGGCATTTTTTGACCAGATGGCAAAGTTGAGAGGGGGGGGA
TTTCTGCCAGAGGTGGCTTGTCGCGTGCTGGATTGGCATTTGGAGGTCAG
AATCAAGGAAGAGGAAGGGAGGCAGGGGGGGAGGGCAGAAAAGGTGGGGC
GGTCAAACTCGCGCTCCTTCTCATACGGGAAGGACGTTCACCGTCTATGC
CTACGTCTTATTCGCCTACTCTCTCGAGTCTGTGCGTCTTATGGCACCAC
AGGCGTGCACCTGTTCCTCCGTATACCCCTTCGTGGCCCGCCTGGGACGA
ATGACAACGGTAGCAGCTACAGCGACAGCTACAGGAACAACGAGGGAGGG
AAAAAGAGCGGTGACCGTCTCCTCCCCCTACTCGTCAGGACGGTGCACCA
AGAAGTGGAAGGCCTGCTGACCCGGAGGGGGCAGGGCGGGGTGCGTTTAC
GGCGAATGCTGGCACGAGAGAGCTTTGCCCTCTTGTCCTTATTGAGTGCC
AATCATCCAGGGGGGGTAATCGCCGGCCTTAACGGATCAGGATGCAGGTG
GACGTTGGAAGCTGTTAATTTTCGGCTGATGAACCGGCTGGTGGAGGGGC
TGGAGGACTTAATGGAGGATGCAGAAAACCTTTCTTGCCTTCCCATGTCT
GACCTCTGA
back to top
Synonyms
Publications