NO02G01630.1, NO02G01630.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO02G01630.1
Unique NameNO02G01630.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5340
Alignment locationchr2:477818..483157 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:477818..483157 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO02G01630.1 vs.
Match: EWM30469.1 (kre2p [Nannochloropsis gaditana])

HSP 1 Score: 1939.1 bits (5022), Expect = 0.000e+0
Identity = 927/1461 (63.45%), Postives = 1124/1461 (76.93%), Query Frame = 0
Query:    1 MDRGNNHVASRSQRWHFLLPGLFGCLLLGIFLTPAPLYQGSVGSV---VSSKEEAEDIWLRGKHSQHSRDTTPIMDLVVANQRNDTKGLLRYFAEAHIKGQLSAEAFKEVEHLLLLEQQHHQPQRSRINADKPYESGAASLSNMTQSPHALVQEEIYWRGRDRREAELTRIHHNYSAIKPFNSWGPIYIWDWFNPDHLCPTMERVGRVGDGGKWMCGLETLRKRPEEVGRPCIVYAFGINDDTSFEEELVNITHCQVFAFDPTVKNLPASALNATPPLHFYKQALGPRDAPSRNFLIERNLLSIMKELGHTYIDVLKVDVEGAEWASFAPVFAAGPLPVGQLLIELHYQDVATTFDFFDQLEKQGFRAFSRETNYHPCVTGKMPVAIEYSFIQPATFPKGDALQASKAMLAGLPTYQRQNGVIYLLTQRTRVHSHLIAMLKGLDKYFNAAPGRSYPIVIFHDDFTPADEAAVRAATSSPLTFHRIEFDIPAFLDKEKIPERTECSKHSSTVGYRHMCRFLGLQVQHLLKHFEWHWRLDDDSLFLSPIGYDPFTLMLQNGKKYGFNRILHDNENCVVGLWDVAKDFAKDRGISPTFLDNWDDGVTFYNNFEISHRSIWTNPVVMDFMEHVDRLGGIYYVRWGDAPIRSLAVALVVPETEVHYFSDIGYAHLPYHRQEPRPLPPPFAGALWYLDGASQYIRDVEENNRLDRMGALKRRRQHGVVVIFSTSERFEALKRCLASFEEKFNKHRGYHVWVWSHGLTYEQRLELRALSSSPVRIDTMERPLHLTEGGENRAATGSKGPCGPHDVNSTRLLGWEISRIIAKRYIWQWRLADNAFFTEDLIDDPFLTMVQSRATYGVAAFGTVPAMHRACVRQLVNTVTTRFAFEKKGREELLDTVESVYFDPSFEISHRALWEDPRWDSLIEIVETGGTAVSWEEKAPTPFVGHVDGAYIRSLGVALHLQGGEGGLHIFDNLHAVDLSASVMISNRSNSNKQQQEGETRRIAGHGLEVSHDSQVLGKLFRPQRLGFLDAMLGTPVSLPRNPSS--VTHGATPPAAAVVTNTPEMVWMLGETRIGHMNNTKPEAAFVLDDAVALLSPANKIIDYFWRHRENQGMPASILNDGTLGSDQTLLPTAGLAVVPERHPDQVRLILLCQRQNVSASYIEGERTQLGSAVVVVTNAQMPPSRWVYDVRQFPGTDKWNGWHTAMALTDGSLVSRNPTTDSVYIMGEQTTNVTTENSWYLKREHVVSKVPLVSLMRMSVEKMEIFATAAAVGAADEEVRNEGQWVSYAETVLETGSPAEAAERLRNHSKTLLPSEEGQAKALVMERVGLGYLSGPKLWFMGDILLDDDNGEEEGKRLVVKTSPAITGPWEDHTVMRLPSEYSTRQYICPSLYVLPDMAQDQQWEVALGLACLVRGHGATPVQEGRSQLSAQVGPTTVDVFRVRFKAPAEAVIDPIPT 1457
            MDR   +  SR++RWH+LLPGLFGCLLLGI LTP P YQ  VGS    V  K+  +D WLR K +Q S++        VA +++ +  LL+YFAEA  +GQLSA AF EVE LL   +Q H+P +      +P     +  S   +S    +Q++IYW+GR+RREAEL ++HHNYSAIKPF+ WGPIYIWDWFNPD++C +MERVGRVGDGGKWMC L TLR R  E  RPCIVYAFGINDDTSFEEELVN T CQVFAFDPTVK+LPASA N TP L FYKQALGPRD PSRNFL+ERNLLSIMKELGHTY+DVLKVDVEGAEWASFAPVF AGPLPVGQLLIELHY+DVATTFDFF  LE  GFRAFSRETNYHPCVTGKMPVAIEYSF+ P T+P GD   ASKAMLA  P Y+R+NGVIY+LTQ+ RVH+HL+ ML+GLDK+FNAAPGR YP++IFHDD+TP DEA VRA+T+S ++FHR+ F +PAFLDKE+IPERTECSKHSST+GYRHMCRFLGLQVQHLL+ FEWHWRLDDDS+FL+PIGYDPF +M +NGK+YGFNRILHDN +CVVGLWDVAK FA+ RG+SPTFLDNWD GVTFYNNFEISHRSIWT+PVV DFM+H+D LGGIYYVRWGDAPIRSLAVA+VVPETEVH+FSD+GYAHLPYHR EPR LP P  GALW+LDGA +YIRDVEE+ ++ +   + RRRQHGVVVIFST ERF+ LKRCLASFE+ FN+H GYHVWVWSHGL+Y+QRLELRALSS+P+RID +++PL+LT      A   ++ PCGP D +S+RL GWE+SR+IAKRY WQWRLAD+A FTEDL++DPFL M +++ATYGVAA   VP    ACV +LV   T     E +   E+ D VESVYFDPSFE+SH+++W D +W++LIE++ET G AV  + ++PT F+G+VD A++RSLGVALHLQGG G  HIFD+LH VDLSAS++  +   S+  Q+     R+  H + VS DS  L  LFRP+ LGFLDA LG PV +PR+ SS   T    P          ++ W+LG+TRIGH+NNTKPE AF LDDAVA+LS A    D+FWRH  +Q  P +I NDGTLG+ Q L+PTAGLAVVPE HPD++RL++LCQ +NVS +  EG+RTQLGSA+ VV+NA   P  W YD+R+ PGT  W+GWHTA+ L DGS VSR P+TD VYI+GE+  N+TT +S Y+KREH+V K+P+ SL+ MS+E ME F   A    + E   ++GQW S+AE  L      EA        + L PS +G+A AL  E VG+GYL GP LWF+GDI+         GKRLV+KT+ A+TGPWEDH+V+ LP +YS RQY+CPSLYVLP  ++D+ WE A+GLAC ++GHG  PV  GRS  + QVGPT V+VFR+ F+A ++  +D IPT
Sbjct:    1 MDRAAFNATSRARRWHYLLPGLFGCLLLGISLTPTPFYQRGVGSSDRGVGIKKSTDDFWLRAKLTQSSQEALVSHTGKVA-EKDVSSSLLQYFAEARKEGQLSASAFGEVERLLQQHEQQHKPTQRDATLSQP-SWPLSGASGGGKSRDVALQDKIYWKGRERREAELAKLHHNYSAIKPFDGWGPIYIWDWFNPDYVCSSMERVGRVGDGGKWMCDLATLRARAVEAHRPCIVYAFGINDDTSFEEELVNRTGCQVFAFDPTVKDLPASAANVTPALQFYKQALGPRDGPSRNFLMERNLLSIMKELGHTYVDVLKVDVEGAEWASFAPVFGAGPLPVGQLLIELHYKDVATTFDFFTNLEGAGFRAFSRETNYHPCVTGKMPVAIEYSFVHPYTYPTGDPTPASKAMLARQPDYERKNGVIYMLTQQARVHTHLLGMLEGLDKHFNAAPGRGYPVLIFHDDYTPEDEALVRASTTSNVSFHRVSFQVPAFLDKERIPERTECSKHSSTLGYRHMCRFLGLQVQHLLQDFEWHWRLDDDSVFLAPIGYDPFRMMAENGKRYGFNRILHDNADCVVGLWDVAKKFARSRGLSPTFLDNWDAGVTFYNNFEISHRSIWTDPVVQDFMDHIDALGGIYYVRWGDAPIRSLAVAMVVPETEVHFFSDVGYAHLPYHRHEPRALPSPLEGALWHLDGAHEYIRDVEEDQQVKKARTMVRRRQHGVVVIFSTRERFDYLKRCLASFEKHFNQHHGYHVWVWSHGLSYDQRLELRALSSAPMRIDLLDQPLNLT--APTSATEAARTPCGPRDAHSSRLRGWEVSRVIAKRYFWQWRLADDAVFTEDLVEDPFLRMARNKATYGVAAVRPVPLSAGACVGRLVEEATRGLGLEGEAVAEVRDMVESVYFDPSFEVSHQSVWTDSKWNALIEVLETSGLAVDGDGESPTSFLGNVDDAFLRSLGVALHLQGGMGAFHIFDDLHPVDLSASLLPWSEPPSHPTQE--SHIRVGEHRVTVSQDSHSLTALFRPRHLGFLDAELGPPVPIPRHVSSSDATRSGEPDTDL------DIAWILGKTRIGHLNNTKPEVAFELDDAVAMLSAAEGDADFFWRHTGSQRAPNAIFNDGTLGAHQALVPTAGLAVVPEDHPDELRLVVLCQIRNVSGNVYEGQRTQLGSAIAVVSNAHQRPELWEYDMRRIPGTHTWSGWHTALTLVDGSSVSRRPSTDYVYILGERAANITTHDSSYIKREHLVGKLPVSSLLAMSMEAMEFFVGRAPGDTSRETNGSKGQWASFAEHFLPAHGQVEAG---MPSVEALFPSADGKATALAAESVGMGYLPGPNLWFVGDIVPPAQGRHGLGKRLVLKTAEAVTGPWEDHSVVELPLDYSRRQYVCPSLYVLPSYSRDRAWEAAIGLACSIKGHGVRPVIGGRSTSTVQVGPTMVNVFRLGFQALSDTEVDAIPT 1446          
The following BLAST results are available for this feature:
BLAST of NO02G01630.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM30469.10.000e+063.45kre2p [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G01630NO02G01630Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO02G01630.1NO02G01630.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO02G01630.1.cds1NO02G01630.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO02G01630.1 ID=NO02G01630.1|Name=NO02G01630.1|organism=Nannochloropsis oceanica|type=mRNA|length=5340bp
AACAGGTGTCTCCTTCCTGTACACGCATGAGCTGCTAGCACCGGAAGTGC
TACACGACAAAGCGGACCGGCTACGACAAAGTTCATCGTCGATCTCGAGT
CCTCCGTCATCCGTGCTGGGAATAAACCACCCAACTAGCCCTTGGACTGC
GCCACGACCGCGGTATCATGGACCGTGGAAATAACCATGTGGCCAGCAGG
TCTCAACGGTGGCATTTCTTGCTTCCGGGCTTGTTTGGTTGCCTCCTTTT
GGGCATCTTTCTCACGCCCGCACCCTTATATCAGGGAAGCGTTGGGTCCG
TCGTGAGCAGCAAGGAGGAGGCGGAAGACATATGGCTGCGCGGCAAGCAC
TCACAGCACTCCCGTGACACCACCCCCATAATGGACTTGGTGGTGGCCAA
CCAGCGAAATGATACTAAGGGCTTGCTGCGGTACTTTGCCGAGGCTCATA
TCAAGGGCCAGTTGAGTGCCGAGGCCTTTAAAGAGGTCGAGCACCTGCTG
CTTCTGGAGCAACAACACCACCAGCCTCAGCGATCACGGATAAATGCGGA
TAAGCCCTATGAATCAGGTGCTGCGTCTCTTTCAAATATGACCCAGAGCC
CCCACGCTTTGGTACAGGAGGAGATATACTGGCGGGGTCGCGATCGCCGG
GAGGCCGAGCTGACTAGAATTCACCACAACTACTCGGCCATCAAGCCATT
CAATAGCTGGGGGCCTATATACATTTGGGATTGGTTCAATCCGGATCATT
TGTGCCCGACTATGGAACGGGTGGGTCGTGTTGGAGATGGGGGCAAATGG
ATGTGTGGGTTGGAGACGCTTCGGAAACGCCCCGAGGAGGTTGGACGGCC
TTGCATTGTATATGCGTTTGGGATAAATGACGACACCTCCTTTGAAGAGG
AACTGGTAAATATAACGCATTGCCAGGTGTTTGCCTTTGACCCGACAGTT
AAGAACTTGCCGGCCTCAGCGTTGAATGCCACGCCGCCCCTGCACTTCTA
CAAACAGGCCTTAGGGCCCCGGGACGCGCCGTCGCGAAATTTCTTGATCG
AGAGGAATCTGTTGAGTATCATGAAGGAGTTGGGACACACATACATTGAT
GTGCTGAAAGTAGACGTGGAAGGTGCGGAGTGGGCGTCCTTCGCCCCGGT
ATTCGCAGCAGGTCCGTTACCCGTGGGGCAACTGCTGATCGAATTGCATT
ACCAGGACGTGGCCACCACCTTTGACTTCTTTGATCAATTGGAAAAGCAG
GGCTTTCGCGCATTTTCCCGAGAGACCAACTACCATCCATGTGTGACGGG
GAAGATGCCCGTTGCAATAGAGTATTCCTTCATCCAACCCGCCACCTTTC
CCAAGGGTGATGCCTTGCAAGCCTCTAAAGCCATGCTGGCCGGCCTCCCC
ACCTACCAGCGACAAAACGGCGTCATCTACTTGCTGACGCAACGGACACG
GGTGCACAGTCATTTAATTGCTATGCTCAAGGGCCTGGACAAGTACTTCA
ATGCGGCGCCTGGCCGGTCGTATCCGATTGTAATTTTCCATGATGACTTC
ACCCCTGCTGATGAGGCGGCCGTGCGGGCAGCGACGTCCAGCCCTCTGAC
TTTTCACCGCATTGAGTTTGACATCCCGGCGTTTCTAGACAAGGAGAAGA
TTCCGGAGCGGACGGAGTGTAGCAAACATTCCTCGACTGTGGGATATCGT
CACATGTGTCGTTTTCTGGGGTTGCAGGTACAGCATTTGCTGAAGCATTT
TGAGTGGCATTGGCGGTTGGATGACGATTCGCTGTTTTTGTCTCCTATTG
GGTACGATCCTTTCACATTGATGCTGCAAAATGGGAAGAAGTATGGATTT
AATCGGATTTTGCACGATAATGAGAACTGTGTGGTGGGTCTGTGGGATGT
TGCGAAGGACTTTGCCAAGGACAGGGGAATATCTCCGACTTTCTTGGATA
ACTGGGATGACGGCGTGACGTTCTATAACAATTTTGAGATTTCACATCGA
TCGATTTGGACAAACCCGGTTGTGATGGATTTTATGGAGCACGTGGATAG
GTTGGGAGGGATCTATTATGTGCGGTGGGGGGATGCGCCGATCCGATCGT
TGGCTGTTGCGTTGGTGGTGCCTGAGACTGAGGTCCACTATTTCTCGGAT
ATCGGATATGCGCATTTGCCTTATCATCGACAGGAGCCACGGCCATTGCC
TCCACCATTTGCGGGTGCTTTGTGGTATTTGGATGGGGCGTCTCAGTATA
TCAGGGATGTTGAGGAGAATAACAGGTTGGATCGCATGGGGGCGTTAAAA
CGGAGGCGGCAGCATGGGGTGGTGGTAATTTTTAGCACGAGTGAACGGTT
TGAAGCGCTAAAGAGGTGCTTGGCGAGTTTTGAGGAGAAGTTTAACAAAC
ATAGGGGGTATCATGTGTGGGTGTGGTCACACGGGTTGACGTACGAGCAG
CGGTTGGAGTTGAGGGCTTTGTCGTCATCCCCTGTGCGGATCGACACGAT
GGAGCGGCCACTGCATCTTACTGAGGGAGGTGAGAACAGAGCAGCGACAG
GGAGCAAGGGGCCATGTGGACCTCATGATGTGAATTCGACGCGGTTGTTG
GGGTGGGAGATCTCGAGGATTATCGCCAAGAGATATATTTGGCAATGGAG
GTTGGCGGACAATGCTTTTTTTACAGAGGACTTGATCGACGACCCCTTCT
TGACAATGGTTCAGAGCAGGGCTACATATGGAGTAGCGGCTTTCGGGACT
GTCCCTGCTATGCATCGGGCGTGTGTGCGGCAATTGGTCAATACGGTGAC
GACGAGGTTTGCGTTTGAGAAGAAGGGGAGGGAGGAATTGTTGGATACAG
TGGAGTCGGTGTACTTTGACCCAAGTTTTGAGATTTCACATCGGGCTCTG
TGGGAGGACCCCAGATGGGATAGCTTGATTGAGATTGTAGAGACGGGGGG
AACGGCTGTGAGTTGGGAGGAGAAGGCACCCACTCCCTTTGTGGGGCATG
TGGACGGGGCGTATATCCGGAGTTTGGGTGTAGCTCTACACTTGCAGGGA
GGGGAGGGAGGTTTGCATATCTTTGATAATTTGCATGCAGTGGACTTATC
GGCAAGCGTTATGATTTCCAACCGCAGCAATTCTAATAAGCAGCAGCAGG
AGGGGGAGACACGGCGCATCGCTGGGCATGGCTTGGAAGTGTCGCATGAC
TCTCAGGTGCTGGGTAAATTGTTTCGTCCGCAACGTTTGGGGTTTCTGGA
CGCAATGCTAGGCACTCCTGTAAGCTTGCCGCGGAATCCGTCCTCTGTTA
CTCATGGTGCTACTCCTCCAGCGGCGGCTGTAGTGACCAATACCCCGGAG
ATGGTCTGGATGTTGGGGGAGACGCGGATTGGTCACATGAACAATACCAA
GCCCGAGGCCGCATTTGTCCTTGATGATGCCGTCGCTCTCCTATCACCAG
CCAACAAGATCATTGATTACTTTTGGAGGCATCGAGAGAATCAGGGTATG
CCCGCGTCTATCCTAAATGATGGAACGCTGGGTTCGGATCAGACCCTCTT
ACCCACGGCGGGCTTGGCCGTGGTCCCTGAGCGACACCCTGATCAAGTTC
GACTCATCCTGCTCTGCCAACGTCAGAACGTAAGTGCATCTTACATTGAA
GGCGAGCGCACACAGCTCGGCTCGGCAGTGGTGGTGGTTACGAATGCCCA
GATGCCGCCTAGTAGGTGGGTGTACGACGTGAGACAATTTCCAGGGACGG
ACAAATGGAATGGATGGCACACAGCGATGGCTCTGACGGATGGCAGCCTT
GTCTCGCGCAACCCGACGACGGATTCTGTGTATATTATGGGAGAACAAAC
TACGAATGTGACAACAGAGAACTCGTGGTATTTGAAGAGGGAGCACGTGG
TTTCCAAGGTACCCCTGGTTTCCTTGATGCGCATGTCGGTGGAAAAGATG
GAAATTTTTGCTACTGCTGCTGCGGTAGGTGCTGCTGATGAGGAAGTAAG
AAATGAAGGACAATGGGTTTCGTACGCTGAGACGGTGCTGGAGACGGGAA
GTCCAGCAGAGGCTGCTGAGCGACTGCGAAATCACTCCAAGACGTTGCTT
CCGTCGGAAGAGGGACAGGCCAAAGCATTGGTCATGGAGCGCGTGGGGCT
GGGTTACTTGTCTGGCCCTAAACTCTGGTTTATGGGCGACATTCTTTTAG
ATGATGACAACGGGGAGGAGGAAGGGAAGCGCCTGGTTGTCAAGACGTCA
CCTGCGATCACCGGTCCGTGGGAGGATCACACTGTCATGCGCTTGCCTTC
TGAATATTCCACGCGACAGTATATTTGTCCCAGCTTGTATGTGCTGCCAG
ATATGGCGCAAGATCAGCAGTGGGAGGTGGCGTTGGGGTTGGCTTGCTTG
GTCAGGGGGCATGGTGCCACACCTGTGCAGGAAGGGAGGAGTCAATTGAG
TGCTCAGGTCGGCCCTACGACTGTGGACGTATTTCGGGTCCGGTTTAAGG
CGCCGGCAGAGGCGGTGATTGATCCAATTCCCACAGTGTAGAAGGAGAAA
AGGACGAATGAAAAGTGAAAAAGTGGATTGAAGGGCAGAGTAATGGAAGG
AGAGTGTGGCCCTGAATCGCTCAGTCGAGGGTAGAAAGTAAAGAGAATTG
CAACGCAGAGCAGTATGGAAATGAGTGACAAGTAAAAACATGACTGAAAG
TTGTATTGTTGTGGCAATAACGGATAATGGATGGTCGAACAGATGCAAGA
TAAAATTTATGGTGGTGAATGTACGTGTGTGTGTGTGTGTGTGTGTGTGT
GTGTGCGCGCGCGCGCGTAAGTGAAAGGGGGGGAGTTGAGACGCCATCTC
ATTCTTCGATTGTGCATTATTGCACCAGGGCGAATGAGTGTGGGTTTGTG
CTTGCTTGATGCTCGTACTTGGTATTTGGATCACATAAACATATTTCAAA
TGTATTTAACGAACTGGGCTTCAACAAAAAGCAACAAGATAGGAGCGACT
GCGGTGTTTTAAGTTGCATACTTTGCCTTGTTACTCAGCAACTGAATCTT
ACACCTACATAATTATCGTGAATCTTCTCTTTAACTCTCTGTTTCTTACT
TGCATGCCGCCGCCGCTGCTGCTACATCTCCTATCTTTCCTCATCTTCGG
CATCAAAGCCCATCGCGCAGCTCGAAAAAGCAAGCTTCTTGACCCCGACT
TTCTACAGGAGTAAAAAAAGCAACTTTAGCCTAGTTGTTGCTGAACGATA
AACCGTCGTCTCGGCCCGAGAAAAATCCGTTAAACCTTAGCGAGCGCCAA
CCACATGTGAGGGAAAGAATTTTAAACTAATGCGAGCGCA
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protein sequence of NO02G01630.1

>NO02G01630.1-protein ID=NO02G01630.1-protein|Name=NO02G01630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1458bp
MDRGNNHVASRSQRWHFLLPGLFGCLLLGIFLTPAPLYQGSVGSVVSSKE
EAEDIWLRGKHSQHSRDTTPIMDLVVANQRNDTKGLLRYFAEAHIKGQLS
AEAFKEVEHLLLLEQQHHQPQRSRINADKPYESGAASLSNMTQSPHALVQ
EEIYWRGRDRREAELTRIHHNYSAIKPFNSWGPIYIWDWFNPDHLCPTME
RVGRVGDGGKWMCGLETLRKRPEEVGRPCIVYAFGINDDTSFEEELVNIT
HCQVFAFDPTVKNLPASALNATPPLHFYKQALGPRDAPSRNFLIERNLLS
IMKELGHTYIDVLKVDVEGAEWASFAPVFAAGPLPVGQLLIELHYQDVAT
TFDFFDQLEKQGFRAFSRETNYHPCVTGKMPVAIEYSFIQPATFPKGDAL
QASKAMLAGLPTYQRQNGVIYLLTQRTRVHSHLIAMLKGLDKYFNAAPGR
SYPIVIFHDDFTPADEAAVRAATSSPLTFHRIEFDIPAFLDKEKIPERTE
CSKHSSTVGYRHMCRFLGLQVQHLLKHFEWHWRLDDDSLFLSPIGYDPFT
LMLQNGKKYGFNRILHDNENCVVGLWDVAKDFAKDRGISPTFLDNWDDGV
TFYNNFEISHRSIWTNPVVMDFMEHVDRLGGIYYVRWGDAPIRSLAVALV
VPETEVHYFSDIGYAHLPYHRQEPRPLPPPFAGALWYLDGASQYIRDVEE
NNRLDRMGALKRRRQHGVVVIFSTSERFEALKRCLASFEEKFNKHRGYHV
WVWSHGLTYEQRLELRALSSSPVRIDTMERPLHLTEGGENRAATGSKGPC
GPHDVNSTRLLGWEISRIIAKRYIWQWRLADNAFFTEDLIDDPFLTMVQS
RATYGVAAFGTVPAMHRACVRQLVNTVTTRFAFEKKGREELLDTVESVYF
DPSFEISHRALWEDPRWDSLIEIVETGGTAVSWEEKAPTPFVGHVDGAYI
RSLGVALHLQGGEGGLHIFDNLHAVDLSASVMISNRSNSNKQQQEGETRR
IAGHGLEVSHDSQVLGKLFRPQRLGFLDAMLGTPVSLPRNPSSVTHGATP
PAAAVVTNTPEMVWMLGETRIGHMNNTKPEAAFVLDDAVALLSPANKIID
YFWRHRENQGMPASILNDGTLGSDQTLLPTAGLAVVPERHPDQVRLILLC
QRQNVSASYIEGERTQLGSAVVVVTNAQMPPSRWVYDVRQFPGTDKWNGW
HTAMALTDGSLVSRNPTTDSVYIMGEQTTNVTTENSWYLKREHVVSKVPL
VSLMRMSVEKMEIFATAAAVGAADEEVRNEGQWVSYAETVLETGSPAEAA
ERLRNHSKTLLPSEEGQAKALVMERVGLGYLSGPKLWFMGDILLDDDNGE
EEGKRLVVKTSPAITGPWEDHTVMRLPSEYSTRQYICPSLYVLPDMAQDQ
QWEVALGLACLVRGHGATPVQEGRSQLSAQVGPTTVDVFRVRFKAPAEAV
IDPIPTV*
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mRNA from alignment at chr2:477818..483157+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO02G01630.1 ID=NO02G01630.1|Name=NO02G01630.1|organism=Nannochloropsis oceanica|type=mRNA|length=5340bp|location=Sequence derived from alignment at chr2:477818..483157+ (Nannochloropsis oceanica)
AACAGGTGTCTCCTTCCTGTACACGCATGAGCTGCTAGCACCGGAAGTGC TACACGACAAAGCGGACCGGCTACGACAAAGTTCATCGTCGATCTCGAGT CCTCCGTCATCCGTGCTGGGAATAAACCACCCAACTAGCCCTTGGACTGC GCCACGACCGCGGTATCATGGACCGTGGAAATAACCATGTGGCCAGCAGG TCTCAACGGTGGCATTTCTTGCTTCCGGGCTTGTTTGGTTGCCTCCTTTT GGGCATCTTTCTCACGCCCGCACCCTTATATCAGGGAAGCGTTGGGTCCG TCGTGAGCAGCAAGGAGGAGGCGGAAGACATATGGCTGCGCGGCAAGCAC TCACAGCACTCCCGTGACACCACCCCCATAATGGACTTGGTGGTGGCCAA CCAGCGAAATGATACTAAGGGCTTGCTGCGGTACTTTGCCGAGGCTCATA TCAAGGGCCAGTTGAGTGCCGAGGCCTTTAAAGAGGTCGAGCACCTGCTG CTTCTGGAGCAACAACACCACCAGCCTCAGCGATCACGGATAAATGCGGA TAAGCCCTATGAATCAGGTGCTGCGTCTCTTTCAAATATGACCCAGAGCC CCCACGCTTTGGTACAGGAGGAGATATACTGGCGGGGTCGCGATCGCCGG GAGGCCGAGCTGACTAGAATTCACCACAACTACTCGGCCATCAAGCCATT CAATAGCTGGGGGCCTATATACATTTGGGATTGGTTCAATCCGGATCATT TGTGCCCGACTATGGAACGGGTGGGTCGTGTTGGAGATGGGGGCAAATGG ATGTGTGGGTTGGAGACGCTTCGGAAACGCCCCGAGGAGGTTGGACGGCC TTGCATTGTATATGCGTTTGGGATAAATGACGACACCTCCTTTGAAGAGG AACTGGTAAATATAACGCATTGCCAGGTGTTTGCCTTTGACCCGACAGTT AAGAACTTGCCGGCCTCAGCGTTGAATGCCACGCCGCCCCTGCACTTCTA CAAACAGGCCTTAGGGCCCCGGGACGCGCCGTCGCGAAATTTCTTGATCG AGAGGAATCTGTTGAGTATCATGAAGGAGTTGGGACACACATACATTGAT GTGCTGAAAGTAGACGTGGAAGGTGCGGAGTGGGCGTCCTTCGCCCCGGT ATTCGCAGCAGGTCCGTTACCCGTGGGGCAACTGCTGATCGAATTGCATT ACCAGGACGTGGCCACCACCTTTGACTTCTTTGATCAATTGGAAAAGCAG GGCTTTCGCGCATTTTCCCGAGAGACCAACTACCATCCATGTGTGACGGG GAAGATGCCCGTTGCAATAGAGTATTCCTTCATCCAACCCGCCACCTTTC CCAAGGGTGATGCCTTGCAAGCCTCTAAAGCCATGCTGGCCGGCCTCCCC ACCTACCAGCGACAAAACGGCGTCATCTACTTGCTGACGCAACGGACACG GGTGCACAGTCATTTAATTGCTATGCTCAAGGGCCTGGACAAGTACTTCA ATGCGGCGCCTGGCCGGTCGTATCCGATTGTAATTTTCCATGATGACTTC ACCCCTGCTGATGAGGCGGCCGTGCGGGCAGCGACGTCCAGCCCTCTGAC TTTTCACCGCATTGAGTTTGACATCCCGGCGTTTCTAGACAAGGAGAAGA TTCCGGAGCGGACGGAGTGTAGCAAACATTCCTCGACTGTGGGATATCGT CACATGTGTCGTTTTCTGGGGTTGCAGGTACAGCATTTGCTGAAGCATTT TGAGTGGCATTGGCGGTTGGATGACGATTCGCTGTTTTTGTCTCCTATTG GGTACGATCCTTTCACATTGATGCTGCAAAATGGGAAGAAGTATGGATTT AATCGGATTTTGCACGATAATGAGAACTGTGTGGTGGGTCTGTGGGATGT TGCGAAGGACTTTGCCAAGGACAGGGGAATATCTCCGACTTTCTTGGATA ACTGGGATGACGGCGTGACGTTCTATAACAATTTTGAGATTTCACATCGA TCGATTTGGACAAACCCGGTTGTGATGGATTTTATGGAGCACGTGGATAG GTTGGGAGGGATCTATTATGTGCGGTGGGGGGATGCGCCGATCCGATCGT TGGCTGTTGCGTTGGTGGTGCCTGAGACTGAGGTCCACTATTTCTCGGAT ATCGGATATGCGCATTTGCCTTATCATCGACAGGAGCCACGGCCATTGCC TCCACCATTTGCGGGTGCTTTGTGGTATTTGGATGGGGCGTCTCAGTATA TCAGGGATGTTGAGGAGAATAACAGGTTGGATCGCATGGGGGCGTTAAAA CGGAGGCGGCAGCATGGGGTGGTGGTAATTTTTAGCACGAGTGAACGGTT TGAAGCGCTAAAGAGGTGCTTGGCGAGTTTTGAGGAGAAGTTTAACAAAC ATAGGGGGTATCATGTGTGGGTGTGGTCACACGGGTTGACGTACGAGCAG CGGTTGGAGTTGAGGGCTTTGTCGTCATCCCCTGTGCGGATCGACACGAT GGAGCGGCCACTGCATCTTACTGAGGGAGGTGAGAACAGAGCAGCGACAG GGAGCAAGGGGCCATGTGGACCTCATGATGTGAATTCGACGCGGTTGTTG GGGTGGGAGATCTCGAGGATTATCGCCAAGAGATATATTTGGCAATGGAG GTTGGCGGACAATGCTTTTTTTACAGAGGACTTGATCGACGACCCCTTCT TGACAATGGTTCAGAGCAGGGCTACATATGGAGTAGCGGCTTTCGGGACT GTCCCTGCTATGCATCGGGCGTGTGTGCGGCAATTGGTCAATACGGTGAC GACGAGGTTTGCGTTTGAGAAGAAGGGGAGGGAGGAATTGTTGGATACAG TGGAGTCGGTGTACTTTGACCCAAGTTTTGAGATTTCACATCGGGCTCTG TGGGAGGACCCCAGATGGGATAGCTTGATTGAGATTGTAGAGACGGGGGG AACGGCTGTGAGTTGGGAGGAGAAGGCACCCACTCCCTTTGTGGGGCATG TGGACGGGGCGTATATCCGGAGTTTGGGTGTAGCTCTACACTTGCAGGGA GGGGAGGGAGGTTTGCATATCTTTGATAATTTGCATGCAGTGGACTTATC GGCAAGCGTTATGATTTCCAACCGCAGCAATTCTAATAAGCAGCAGCAGG AGGGGGAGACACGGCGCATCGCTGGGCATGGCTTGGAAGTGTCGCATGAC TCTCAGGTGCTGGGTAAATTGTTTCGTCCGCAACGTTTGGGGTTTCTGGA CGCAATGCTAGGCACTCCTGTAAGCTTGCCGCGGAATCCGTCCTCTGTTA CTCATGGTGCTACTCCTCCAGCGGCGGCTGTAGTGACCAATACCCCGGAG ATGGTCTGGATGTTGGGGGAGACGCGGATTGGTCACATGAACAATACCAA GCCCGAGGCCGCATTTGTCCTTGATGATGCCGTCGCTCTCCTATCACCAG CCAACAAGATCATTGATTACTTTTGGAGGCATCGAGAGAATCAGGGTATG CCCGCGTCTATCCTAAATGATGGAACGCTGGGTTCGGATCAGACCCTCTT ACCCACGGCGGGCTTGGCCGTGGTCCCTGAGCGACACCCTGATCAAGTTC GACTCATCCTGCTCTGCCAACGTCAGAACGTAAGTGCATCTTACATTGAA GGCGAGCGCACACAGCTCGGCTCGGCAGTGGTGGTGGTTACGAATGCCCA GATGCCGCCTAGTAGGTGGGTGTACGACGTGAGACAATTTCCAGGGACGG ACAAATGGAATGGATGGCACACAGCGATGGCTCTGACGGATGGCAGCCTT GTCTCGCGCAACCCGACGACGGATTCTGTGTATATTATGGGAGAACAAAC TACGAATGTGACAACAGAGAACTCGTGGTATTTGAAGAGGGAGCACGTGG TTTCCAAGGTACCCCTGGTTTCCTTGATGCGCATGTCGGTGGAAAAGATG GAAATTTTTGCTACTGCTGCTGCGGTAGGTGCTGCTGATGAGGAAGTAAG AAATGAAGGACAATGGGTTTCGTACGCTGAGACGGTGCTGGAGACGGGAA GTCCAGCAGAGGCTGCTGAGCGACTGCGAAATCACTCCAAGACGTTGCTT CCGTCGGAAGAGGGACAGGCCAAAGCATTGGTCATGGAGCGCGTGGGGCT GGGTTACTTGTCTGGCCCTAAACTCTGGTTTATGGGCGACATTCTTTTAG ATGATGACAACGGGGAGGAGGAAGGGAAGCGCCTGGTTGTCAAGACGTCA CCTGCGATCACCGGTCCGTGGGAGGATCACACTGTCATGCGCTTGCCTTC TGAATATTCCACGCGACAGTATATTTGTCCCAGCTTGTATGTGCTGCCAG ATATGGCGCAAGATCAGCAGTGGGAGGTGGCGTTGGGGTTGGCTTGCTTG GTCAGGGGGCATGGTGCCACACCTGTGCAGGAAGGGAGGAGTCAATTGAG TGCTCAGGTCGGCCCTACGACTGTGGACGTATTTCGGGTCCGGTTTAAGG CGCCGGCAGAGGCGGTGATTGATCCAATTCCCACAGTGTAGAAGGAGAAA AGGACGAATGAAAAGTGAAAAAGTGGATTGAAGGGCAGAGTAATGGAAGG AGAGTGTGGCCCTGAATCGCTCAGTCGAGGGTAGAAAGTAAAGAGAATTG CAACGCAGAGCAGTATGGAAATGAGTGACAAGTAAAAACATGACTGAAAG TTGTATTGTTGTGGCAATAACGGATAATGGATGGTCGAACAGATGCAAGA TAAAATTTATGGTGGTGAATGTACGTGTGTGTGTGTGTGTGTGTGTGTGT GTGTGCGCGCGCGCGCGTAAGTGAAAGGGGGGGAGTTGAGACGCCATCTC ATTCTTCGATTGTGCATTATTGCACCAGGGCGAATGAGTGTGGGTTTGTG CTTGCTTGATGCTCGTACTTGGTATTTGGATCACATAAACATATTTCAAA TGTATTTAACGAACTGGGCTTCAACAAAAAGCAACAAGATAGGAGCGACT GCGGTGTTTTAAGTTGCATACTTTGCCTTGTTACTCAGCAACTGAATCTT ACACCTACATAATTATCGTGAATCTTCTCTTTAACTCTCTGTTTCTTACT TGCATGCCGCCGCCGCTGCTGCTACATCTCCTATCTTTCCTCATCTTCGG CATCAAAGCCCATCGCGCAGCTCGAAAAAGCAAGCTTCTTGACCCCGACT TTCTACAGGAGTAAAAAAAGCAACTTTAGCCTAGTTGTTGCTGAACGATA AACCGTCGTCTCGGCCCGAGAAAAATCCGTTAAACCTTAGCGAGCGCCAA CCACATGTGAGGGAAAGAATTTTAAACTAATGCGAGCGCA
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Coding sequence (CDS) from alignment at chr2:477818..483157+

>NO02G01630.1 ID=NO02G01630.1|Name=NO02G01630.1|organism=Nannochloropsis oceanica|type=CDS|length=4374bp|location=Sequence derived from alignment at chr2:477818..483157+ (Nannochloropsis oceanica)
ATGGACCGTGGAAATAACCATGTGGCCAGCAGGTCTCAACGGTGGCATTT
CTTGCTTCCGGGCTTGTTTGGTTGCCTCCTTTTGGGCATCTTTCTCACGC
CCGCACCCTTATATCAGGGAAGCGTTGGGTCCGTCGTGAGCAGCAAGGAG
GAGGCGGAAGACATATGGCTGCGCGGCAAGCACTCACAGCACTCCCGTGA
CACCACCCCCATAATGGACTTGGTGGTGGCCAACCAGCGAAATGATACTA
AGGGCTTGCTGCGGTACTTTGCCGAGGCTCATATCAAGGGCCAGTTGAGT
GCCGAGGCCTTTAAAGAGGTCGAGCACCTGCTGCTTCTGGAGCAACAACA
CCACCAGCCTCAGCGATCACGGATAAATGCGGATAAGCCCTATGAATCAG
GTGCTGCGTCTCTTTCAAATATGACCCAGAGCCCCCACGCTTTGGTACAG
GAGGAGATATACTGGCGGGGTCGCGATCGCCGGGAGGCCGAGCTGACTAG
AATTCACCACAACTACTCGGCCATCAAGCCATTCAATAGCTGGGGGCCTA
TATACATTTGGGATTGGTTCAATCCGGATCATTTGTGCCCGACTATGGAA
CGGGTGGGTCGTGTTGGAGATGGGGGCAAATGGATGTGTGGGTTGGAGAC
GCTTCGGAAACGCCCCGAGGAGGTTGGACGGCCTTGCATTGTATATGCGT
TTGGGATAAATGACGACACCTCCTTTGAAGAGGAACTGGTAAATATAACG
CATTGCCAGGTGTTTGCCTTTGACCCGACAGTTAAGAACTTGCCGGCCTC
AGCGTTGAATGCCACGCCGCCCCTGCACTTCTACAAACAGGCCTTAGGGC
CCCGGGACGCGCCGTCGCGAAATTTCTTGATCGAGAGGAATCTGTTGAGT
ATCATGAAGGAGTTGGGACACACATACATTGATGTGCTGAAAGTAGACGT
GGAAGGTGCGGAGTGGGCGTCCTTCGCCCCGGTATTCGCAGCAGGTCCGT
TACCCGTGGGGCAACTGCTGATCGAATTGCATTACCAGGACGTGGCCACC
ACCTTTGACTTCTTTGATCAATTGGAAAAGCAGGGCTTTCGCGCATTTTC
CCGAGAGACCAACTACCATCCATGTGTGACGGGGAAGATGCCCGTTGCAA
TAGAGTATTCCTTCATCCAACCCGCCACCTTTCCCAAGGGTGATGCCTTG
CAAGCCTCTAAAGCCATGCTGGCCGGCCTCCCCACCTACCAGCGACAAAA
CGGCGTCATCTACTTGCTGACGCAACGGACACGGGTGCACAGTCATTTAA
TTGCTATGCTCAAGGGCCTGGACAAGTACTTCAATGCGGCGCCTGGCCGG
TCGTATCCGATTGTAATTTTCCATGATGACTTCACCCCTGCTGATGAGGC
GGCCGTGCGGGCAGCGACGTCCAGCCCTCTGACTTTTCACCGCATTGAGT
TTGACATCCCGGCGTTTCTAGACAAGGAGAAGATTCCGGAGCGGACGGAG
TGTAGCAAACATTCCTCGACTGTGGGATATCGTCACATGTGTCGTTTTCT
GGGGTTGCAGGTACAGCATTTGCTGAAGCATTTTGAGTGGCATTGGCGGT
TGGATGACGATTCGCTGTTTTTGTCTCCTATTGGGTACGATCCTTTCACA
TTGATGCTGCAAAATGGGAAGAAGTATGGATTTAATCGGATTTTGCACGA
TAATGAGAACTGTGTGGTGGGTCTGTGGGATGTTGCGAAGGACTTTGCCA
AGGACAGGGGAATATCTCCGACTTTCTTGGATAACTGGGATGACGGCGTG
ACGTTCTATAACAATTTTGAGATTTCACATCGATCGATTTGGACAAACCC
GGTTGTGATGGATTTTATGGAGCACGTGGATAGGTTGGGAGGGATCTATT
ATGTGCGGTGGGGGGATGCGCCGATCCGATCGTTGGCTGTTGCGTTGGTG
GTGCCTGAGACTGAGGTCCACTATTTCTCGGATATCGGATATGCGCATTT
GCCTTATCATCGACAGGAGCCACGGCCATTGCCTCCACCATTTGCGGGTG
CTTTGTGGTATTTGGATGGGGCGTCTCAGTATATCAGGGATGTTGAGGAG
AATAACAGGTTGGATCGCATGGGGGCGTTAAAACGGAGGCGGCAGCATGG
GGTGGTGGTAATTTTTAGCACGAGTGAACGGTTTGAAGCGCTAAAGAGGT
GCTTGGCGAGTTTTGAGGAGAAGTTTAACAAACATAGGGGGTATCATGTG
TGGGTGTGGTCACACGGGTTGACGTACGAGCAGCGGTTGGAGTTGAGGGC
TTTGTCGTCATCCCCTGTGCGGATCGACACGATGGAGCGGCCACTGCATC
TTACTGAGGGAGGTGAGAACAGAGCAGCGACAGGGAGCAAGGGGCCATGT
GGACCTCATGATGTGAATTCGACGCGGTTGTTGGGGTGGGAGATCTCGAG
GATTATCGCCAAGAGATATATTTGGCAATGGAGGTTGGCGGACAATGCTT
TTTTTACAGAGGACTTGATCGACGACCCCTTCTTGACAATGGTTCAGAGC
AGGGCTACATATGGAGTAGCGGCTTTCGGGACTGTCCCTGCTATGCATCG
GGCGTGTGTGCGGCAATTGGTCAATACGGTGACGACGAGGTTTGCGTTTG
AGAAGAAGGGGAGGGAGGAATTGTTGGATACAGTGGAGTCGGTGTACTTT
GACCCAAGTTTTGAGATTTCACATCGGGCTCTGTGGGAGGACCCCAGATG
GGATAGCTTGATTGAGATTGTAGAGACGGGGGGAACGGCTGTGAGTTGGG
AGGAGAAGGCACCCACTCCCTTTGTGGGGCATGTGGACGGGGCGTATATC
CGGAGTTTGGGTGTAGCTCTACACTTGCAGGGAGGGGAGGGAGGTTTGCA
TATCTTTGATAATTTGCATGCAGTGGACTTATCGGCAAGCGTTATGATTT
CCAACCGCAGCAATTCTAATAAGCAGCAGCAGGAGGGGGAGACACGGCGC
ATCGCTGGGCATGGCTTGGAAGTGTCGCATGACTCTCAGGTGCTGGGTAA
ATTGTTTCGTCCGCAACGTTTGGGGTTTCTGGACGCAATGCTAGGCACTC
CTGTAAGCTTGCCGCGGAATCCGTCCTCTGTTACTCATGGTGCTACTCCT
CCAGCGGCGGCTGTAGTGACCAATACCCCGGAGATGGTCTGGATGTTGGG
GGAGACGCGGATTGGTCACATGAACAATACCAAGCCCGAGGCCGCATTTG
TCCTTGATGATGCCGTCGCTCTCCTATCACCAGCCAACAAGATCATTGAT
TACTTTTGGAGGCATCGAGAGAATCAGGGTATGCCCGCGTCTATCCTAAA
TGATGGAACGCTGGGTTCGGATCAGACCCTCTTACCCACGGCGGGCTTGG
CCGTGGTCCCTGAGCGACACCCTGATCAAGTTCGACTCATCCTGCTCTGC
CAACGTCAGAACGTAAGTGCATCTTACATTGAAGGCGAGCGCACACAGCT
CGGCTCGGCAGTGGTGGTGGTTACGAATGCCCAGATGCCGCCTAGTAGGT
GGGTGTACGACGTGAGACAATTTCCAGGGACGGACAAATGGAATGGATGG
CACACAGCGATGGCTCTGACGGATGGCAGCCTTGTCTCGCGCAACCCGAC
GACGGATTCTGTGTATATTATGGGAGAACAAACTACGAATGTGACAACAG
AGAACTCGTGGTATTTGAAGAGGGAGCACGTGGTTTCCAAGGTACCCCTG
GTTTCCTTGATGCGCATGTCGGTGGAAAAGATGGAAATTTTTGCTACTGC
TGCTGCGGTAGGTGCTGCTGATGAGGAAGTAAGAAATGAAGGACAATGGG
TTTCGTACGCTGAGACGGTGCTGGAGACGGGAAGTCCAGCAGAGGCTGCT
GAGCGACTGCGAAATCACTCCAAGACGTTGCTTCCGTCGGAAGAGGGACA
GGCCAAAGCATTGGTCATGGAGCGCGTGGGGCTGGGTTACTTGTCTGGCC
CTAAACTCTGGTTTATGGGCGACATTCTTTTAGATGATGACAACGGGGAG
GAGGAAGGGAAGCGCCTGGTTGTCAAGACGTCACCTGCGATCACCGGTCC
GTGGGAGGATCACACTGTCATGCGCTTGCCTTCTGAATATTCCACGCGAC
AGTATATTTGTCCCAGCTTGTATGTGCTGCCAGATATGGCGCAAGATCAG
CAGTGGGAGGTGGCGTTGGGGTTGGCTTGCTTGGTCAGGGGGCATGGTGC
CACACCTGTGCAGGAAGGGAGGAGTCAATTGAGTGCTCAGGTCGGCCCTA
CGACTGTGGACGTATTTCGGGTCCGGTTTAAGGCGCCGGCAGAGGCGGTG
ATTGATCCAATTCCCACAGTGTAG
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Synonyms
Publications