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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr2 | genome | chr2:447085..450133 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO02G01510.2 vs.
Match: EWM30476.1 (Fatty acid desaturase type 2 [Nannochloropsis gaditana]) HSP 1 Score: 652.1 bits (1681), Expect = 9.700e-184 Identity = 308/333 (92.49%), Postives = 325/333 (97.60%), Query Frame = 0
Query: 21 MHVYPDKHEVIVSMEPMVEGMLSKLLLPTGEKAWQPSDFVPDLTKEGWEDEVKEFREKAETLPDETLVVLVGDMVTEEALPTYQTLLNTFEGVDDPTGTSPSAWCRWTRGWTSEENRHGDLLNRYLYLTGRVDMRAIECTIQHLISSGFNPKIKKDPYKGFVYTSFQERATKISHQNVARLANSAGDGNLGLICSKIAGDESRHEKAYQAIFQEILKKDPEGGLKSFYELMSDQITMPAVMMTDGHDPDLFEHFSVTAQKLGVYTAVDYANILEYLVETWDIEHMGGLSSEGAKYQEKLCKLAPRYMRLAEMSLDRVKKMPKTPYSWIHGRVA 354
MHVYPDK EVI S+EPMVEGML+KLLLPTGEKAWQP DFVPDLTKEGWE+EVKEFREKA TLPDETLVVLVGDMVTEEALPTYQTLLNTFEGVDDPTGTSPSAWC+WTRGWTSEENRHGDLLNRYLYLTGRVDMR+IECTIQHLISSGFNPKIKKDPYKGFVYTSFQERATKISHQNVARLAN+AGDGNLGLICSKIAGDESRHEKAYQAIF+EIL +DPEGGLKSFYELM+DQITMPAVMMTDGHDPDLFEHFS+TAQKLGVYTAVDYANIL++LVE WDIEH+GGLS EGA+YQEKLCKL PRY++LAEMSLDRVKKMPKTPYSWIHGR+A
Sbjct: 1 MHVYPDKVEVITSLEPMVEGMLTKLLLPTGEKAWQPQDFVPDLTKEGWEEEVKEFREKAATLPDETLVVLVGDMVTEEALPTYQTLLNTFEGVDDPTGTSPSAWCKWTRGWTSEENRHGDLLNRYLYLTGRVDMRSIECTIQHLISSGFNPKIKKDPYKGFVYTSFQERATKISHQNVARLANNAGDGNLGLICSKIAGDESRHEKAYQAIFKEILNRDPEGGLKSFYELMTDQITMPAVMMTDGHDPDLFEHFSITAQKLGVYTAVDYANILDHLVEIWDIEHIGGLSGEGARYQEKLCKLGPRYLKLAEMSLDRVKKMPKTPYSWIHGRMA 333
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO02G01510.2 ID=NO02G01510.2|Name=NO02G01510.2|organism=Nannochloropsis oceanica|type=mRNA|length=2386bp GGGGGTTTCGCGCATTCCGAGCCGCTCTCCGAACCACTTCCACCGATTAC AAGGGTCTTTTTGGCTTTCTAGGACGCATCTGCACCCCGATTTACAGTCA ACCTCGAGTCATACTAAGGGAAAGGTCGTATTAATATCCGCGAAATGAAC CATCCATCGATTTTTGGCGCCCTGAACTCCAGAAACACCAGATCAACACG AACAGCCCCTGGTGACTACGTCGCGTCATCGCCCACGGCCTCATCAAACG AGTTCGAAGGCTCTAGAGATACAATTCGTCCAGCCCCCATTCACCGCGGT TCCCGTCCTTTGTGGTGTGCACAGGACAAGCAATACAACATCATACAATT TATTCGATGACAAAGTCGCGGTGTTTTCGGATGAGGCAGTATGCCGCGTC GATGATGATGATGCCAAATGCCCGTGTCGCGCATTCGTCGCGAGACCGTG TCTCGCACTCTCTCCCATGTGCGTGTTGAATGAAGTGATTCACCCGTCTG CACACTCGTTTCACTTACTCACGTTCTCAGCACGCAGGCATGGACGGGCT TGTTGATAGCACACGAGCCATTACGGCATTTCACGCCACGTCATGCCAGG TGTTGGACCGAGTCGGCTTCATAAGTTTTTCGAGAAGCCCCTCCTTGCAC TTGGCCGTCCCCCACTACGGCATGTTTTTTGCCTGATGACGGAATCGCGC AGCGATAAGGCAGTGACAATCCCCTGAGGCGAAGGCGGCGCTTTTCGGTA CGGGCACGCCAGGGTACTCACACCACACCTCTCCATGGGTTCCCTTTACC ACCATCAAGACACAGCACACAAGGCAAGCGACATCTCGTCTCGACCTTTT TTCATTATGGAGAGCAGCAGCAGCACCCAAGGTGCCAAAGCCTTGCTTCG TGGCACCGTCACGGCCCTGGTCCTTTCCACCAGCCTAGCCTTTGTCGTCC CCTCCTCCCAGAGCCTCCGCCCGGGCGCTCCTGCATCGTCTCATCGAGTG GCTCCTCTGCGGGCCGTGGCCATCGAGCCTCCTGCCGTCGCCCCCCCCGC CCAGGCCGCCAAGCCCGACTGGGAGGCGGAGTTTCGACGCAAGCAGTAAG TCACTTCCGAGGGAGGGATAGAGAAATGACCTGATGGCTCGTGCGTGTTT GTACTGTAAGTGGATATATGTATAGCATGAGTAGGTGTGGAGAGGGGAAG TGTTGGGAATCGGGAGTCTTACTGCGCCACATGTTTTGGTGGGTCACATA CGCTGCCGCCTTGGCAGGCCGGTTTCCTGGCCCGTGGAATGTATGTCTCA CCCAAGGAGGGCACATGCGGGAATGTGAGGTGGGCTGCCAACGAGCTGAT GCACGTCTACCCCGACAAGCACGAAGTCATTGTCAGCATGGAGCCCATGG TGGAAGGGATGCTCTCGAAGCTCCTCCTCCCCACGGGGGAGAAGGCTTGG CAACCGTCCGACTTTGTCCCGGACCTGACCAAGGAAGGGTGGGAAGACGA GGTAAAGGAATTCAGGGAAAAGGCGGAGACGTTGCCGGACGAGACGCTGG TGGTCTTGGTGGGGGACATGGTGACTGAGGAGGCGTTGCCCACTTACCAG ACGCTGTTGAACACGTTCGAGGGCGTGGATGACCCCACCGGGACGAGTCC TTCGGCCTGGTGCCGATGGACACGGGGGTGGACGAGCGAGGAGAACAGGC ACGGGGATCTGCTCAACCGGTACTTGTACTTGACGGGGCGCGTGGACATG CGCGCGATCGAGTGCACGATTCAGCACCTGATTTCGAGCGGTTTCAACCC CAAAATCAAGAAGGATCCGTACAAGGGTTTCGTATACACCTCCTTCCAAG AGCGAGCAACCAAGATCTCCCATCAGAATGTGGCGCGGCTGGCCAACAGC GCCGGTGATGGCAATCTGGGTCTGATCTGCAGTAAGATTGCAGGGGATGA GTCGAGGCACGAGAAGGCATACCAAGCCATCTTCCAGGAGATCCTCAAGA AGGACCCGGAAGGGGGGTTGAAGAGCTTCTATGAGTTAATGAGTGATCAG ATCACCATGCCTGCCGTGATGATGACGGACGGCCACGACCCGGACCTCTT CGAGCACTTCTCGGTCACGGCGCAGAAGCTCGGTGTCTACACGGCAGTGG ACTACGCCAACATTCTGGAATATTTGGTGGAGACATGGGACATCGAGCAC ATGGGAGGCCTGTCTTCTGAAGGGGCCAAGTACCAGGAGAAGCTCTGCAA GCTCGCGCCCCGATACATGAGGCTTGCCGAGATGAGTCTTGACCGGGTGA AAAAGATGCCCAAGACGCCTTATTCTTGGATCCATGGACGCGTGGCTTAA GCAGGGAAAGGGGGGAGGGAGGAGGGACGGTGGGTG back to topprotein sequence of NO02G01510.2 >NO02G01510.2-protein ID=NO02G01510.2-protein|Name=NO02G01510.2|organism=Nannochloropsis oceanica|type=polypeptide|length=354bp MYVSPKEGTCGNVRWAANELMHVYPDKHEVIVSMEPMVEGMLSKLLLPTG EKAWQPSDFVPDLTKEGWEDEVKEFREKAETLPDETLVVLVGDMVTEEAL PTYQTLLNTFEGVDDPTGTSPSAWCRWTRGWTSEENRHGDLLNRYLYLTG RVDMRAIECTIQHLISSGFNPKIKKDPYKGFVYTSFQERATKISHQNVAR LANSAGDGNLGLICSKIAGDESRHEKAYQAIFQEILKKDPEGGLKSFYEL MSDQITMPAVMMTDGHDPDLFEHFSVTAQKLGVYTAVDYANILEYLVETW DIEHMGGLSSEGAKYQEKLCKLAPRYMRLAEMSLDRVKKMPKTPYSWIHG RVA* back to topmRNA from alignment at chr2:447085..450133- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO02G01510.2 ID=NO02G01510.2|Name=NO02G01510.2|organism=Nannochloropsis oceanica|type=mRNA|length=3049bp|location=Sequence derived from alignment at chr2:447085..450133- (Nannochloropsis oceanica) GGGGGTTTCGCGCATTCCGAGCCGCTCTCCGAACCACTTCCACCGATTAC
AAGGGTCTTTTTGGCTTTCTAGGACGCATCTGCACCCCGATTTACAGTCA
ACCTCGAGTCATACTAAGGGAAAGGTCGTATTAATATCCGCGAAATGAAC
CATCCATCGATTTTTGGCGCCCTGAACTCCAGAAACACCAGATCAACACG
AACAGCCCCTGGTGACTACGTCGCGTCATCGCCCACGGCCTCATCAAACG
AGTTCGAAGGCTCTAGAGATACAATTCGTCCAGCCCCCATTCACCGCGGT
TCCCGTCCTTTGTGGTGTGCACAGGACAAGCAATACAACATCATACAATT
TATTCGATGACAAAGTCGCGGTGTTTTCGGATGAGGCAGTATGCCGCGTC
GATGATGATGATGCCAAATGCCCGTGTCGCGCATTCGTCGCGAGACCGTG
TCTCGCACTCTCTCCCATGTGCGTGTTGAATGAAGTGATTCACCCGTCTG
CACACTCGTTTCACTTACTCACGTTCTCAGCACGCAGGCATGGACGGGCT
TGTTGATAGCACACGAGCCATTACGGCATTTCACGCCACGTCATGCCAGG
TGTTGGACCGAGTCGGCTTCATAAGTTTTTCGAGAAGCCCCTCCTTGCAC
TTGGCCGTCCCCCACTACGGCATGTTTTTTGCCTGATGACGGAATCGCGC
AGCGATAAGGCAGTGACAATCCCCTGAGGCGAAGGCGGCGCTTTTCGGTA
CGGGCACGCCAGGGTACTCACACCACACCTCTCCATGGGTTCCCTTTACC
ACCATCAAGACACAGCACACAAGGCAAGCGACATCTCGTCTCGACCTTTT
TTCATTATGGAGAGCAGCAGCAGCACCCAAGGTGCCAAAGCCTTGCTTCG
TGGCACCGTCACGGCCCTGGTCCTTTCCACCAGCCTAGCCTTTGTCGTCC
CCTCCTCCCAGAGCCTCCGCCCGGGCGCTCCTGCATCGTCTCATCGAGGT
ACGTGTTGTGCTTGCATGCGCACAGTCAGCAGGAGAGCAGGGGGGAAAGC
ACCCCGAAGAACACACATGCGTGAGCCTGGCGACAAACAACGAGCACATG
CCGACACTCACACGCTCCCGCCCTTACTTCTCTGGCATCACAGTGGCTCC
TCTGCGGGCCGTGGCCATCGAGCCTCCTGCCGTCGCCCCCCCCGCCCAGG
CCGCCAAGCCCGACTGGGAGGCGGAGTTTCGACGCAAGCAGTAAGTCACT
TCCGAGGGAGGGATAGAGAAATGACCTGATGGCTCGTGCGTGTTTGTACT
GTAAGTGGATATATGTATAGCATGAGTAGGTGTGGAGAGGGGAAGTGTTG
GGAATCGGGAGTCTTACTGCGCCACATGTTTTGGTGGGTCACATACGCTG
CCGCCTTGGCAGGCCGGTTTCCTGGCCCGTGGAATGTATGTCTCACCCAA
GGAGGGCACATGCGGGAATGTGAGGTGGTAAGAGAAGGTTTGGAAGGTCT
ATTAAAGAATGTCGGTCTTGTCTGTGAAGGCCGGCAGACAGGGCGCACGT
CTGTCAGCTGCTGTCTTCTGCTTCTCTCCCTCACGTTGTTCATAAGCAGG
TGGGGATCAAAAAGTAGCCTTTTCCTCCCCTCGCACCCACTCACGTCCTC
CCCTCCTGTCCTCCCTCCCTCTTTCCCTCCACTGATGCACAGGGCTGCCA
ACGAGCTGATGCACGTCTACCCCGACAAGCACGAAGTCATTGTCAGCATG
GAGCCCATGGTGGAAGGGATGCTCTCGAAGCTCCTCCTCCCCACGGGGGA
GAAGGCTTGGCAACCGTCCGACTTTGTCCCGGACCTGACCAAGGAAGGGT
GGGAAGACGAGGTAAAGGAATTCAGGGAAAAGGCGGAGACGTTGCCGGAC
GAGACGCTGGTGGTCTTGGTGGGGGACATGGTGACTGAGGAGGCGTTGCC
CACTTACCAGACGCTGTTGAACACGTTCGAGGGCGTGGATGACCCCACCG
GGACGAGTCCTTCGGCCTGGTGCCGATGGACACGGGGGTGGACGAGCGAG
GAGAACAGGCACGGGGATCTGCTCAACCGGTACTTGTACTTGACGGGGCG
CGTGGACATGCGCGCGATCGAGTGCACGATTCAGCACCTGGTACGTGGGG
ATGGGAGGGAGGGAGAGAGGGAGGGATGGAGGAAGGCTCCTGTTCTTGTG
TTCCCCCCCTTCGTCTCGCGCGATGTCTAACTCATTCTTCCCACCCTCCC
TCCCTCTGCGTCCGTAAATTAGATTTCGAGCGGTTTCAACCCCAAAATCA
AGAAGGATCCGTACAAGGGTTTCGTATACACCTCCTTCCAAGAGCGAGCA
ACCAAGATCTCCCATCAGAATGTGGCGCGGCTGGCCAACAGCGCCGGTGA
TGGCAATCTGGGTCTGATCTGCAGTAAGATTGCAGGGGATGAGTCGAGGC
ACGAGAAGGCATACCAAGCCATCTTCCAGGAGATCCTCAAGAAGGACCCG
GAAGGGGGGTTGAAGAGCTTCTATGAGTTAATGAGTGATCAGGTAGGGAG
GGCGGAGGAGAGGGAGGGGGAAAGGGAGGGAGGTAGGTACGCATTAGGAG
GCAGGAGGAAGGGAACGACACAAGTACTTTCACCATGGGCCAAGATACGG
CTGTTTACCTTTCCCTCCTCCCTCCCTCTCTCCCTCCCTCCCTCCCTCCC
TCCCTCATCTCAGATCACCATGCCTGCCGTGATGATGACGGACGGCCACG
ACCCGGACCTCTTCGAGCACTTCTCGGTCACGGCGCAGAAGCTCGGTGTC
TACACGGCAGTGGACTACGCCAACATTCTGGAATATTTGGTGGAGACATG
GGACATCGAGCACATGGGAGGCCTGTCTTCTGAAGGGGCCAAGTACCAGG
AGAAGCTCTGCAAGCTCGCGCCCCGATACATGAGGCTTGCCGAGATGAGT
CTTGACCGGGTGAAAAAGATGCCCAAGACGCCTTATTCTTGGATCCATGG
ACGCGTGGCTTAAGCAGGGAAAGGGGGGAGGGAGGAGGGACGGTGGGTG back to topCoding sequence (CDS) from alignment at chr2:447085..450133- >NO02G01510.2 ID=NO02G01510.2|Name=NO02G01510.2|organism=Nannochloropsis oceanica|type=CDS|length=1062bp|location=Sequence derived from alignment at chr2:447085..450133- (Nannochloropsis oceanica) ATGTATGTCTCACCCAAGGAGGGCACATGCGGGAATGTGAGGTGGGCTGC CAACGAGCTGATGCACGTCTACCCCGACAAGCACGAAGTCATTGTCAGCA TGGAGCCCATGGTGGAAGGGATGCTCTCGAAGCTCCTCCTCCCCACGGGG GAGAAGGCTTGGCAACCGTCCGACTTTGTCCCGGACCTGACCAAGGAAGG GTGGGAAGACGAGGTAAAGGAATTCAGGGAAAAGGCGGAGACGTTGCCGG ACGAGACGCTGGTGGTCTTGGTGGGGGACATGGTGACTGAGGAGGCGTTG CCCACTTACCAGACGCTGTTGAACACGTTCGAGGGCGTGGATGACCCCAC CGGGACGAGTCCTTCGGCCTGGTGCCGATGGACACGGGGGTGGACGAGCG AGGAGAACAGGCACGGGGATCTGCTCAACCGGTACTTGTACTTGACGGGG CGCGTGGACATGCGCGCGATCGAGTGCACGATTCAGCACCTGATTTCGAG CGGTTTCAACCCCAAAATCAAGAAGGATCCGTACAAGGGTTTCGTATACA CCTCCTTCCAAGAGCGAGCAACCAAGATCTCCCATCAGAATGTGGCGCGG CTGGCCAACAGCGCCGGTGATGGCAATCTGGGTCTGATCTGCAGTAAGAT TGCAGGGGATGAGTCGAGGCACGAGAAGGCATACCAAGCCATCTTCCAGG AGATCCTCAAGAAGGACCCGGAAGGGGGGTTGAAGAGCTTCTATGAGTTA ATGAGTGATCAGATCACCATGCCTGCCGTGATGATGACGGACGGCCACGA CCCGGACCTCTTCGAGCACTTCTCGGTCACGGCGCAGAAGCTCGGTGTCT ACACGGCAGTGGACTACGCCAACATTCTGGAATATTTGGTGGAGACATGG GACATCGAGCACATGGGAGGCCTGTCTTCTGAAGGGGCCAAGTACCAGGA GAAGCTCTGCAAGCTCGCGCCCCGATACATGAGGCTTGCCGAGATGAGTC TTGACCGGGTGAAAAAGATGCCCAAGACGCCTTATTCTTGGATCCATGGA CGCGTGGCTTAA back to top
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