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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr2 | genome | chr2:442735..445520 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO02G01500.1 vs.
Match: EWM30474.1 (methionine aminopeptidase [Nannochloropsis gaditana]) HSP 1 Score: 667.9 bits (1722), Expect = 1.900e-188 Identity = 321/376 (85.37%), Postives = 342/376 (90.96%), Query Frame = 0
Query: 19 VLQFLVLVALVLGEPAAAFQPSSPLSPSGTTSSSLQQRGRSRGNVVCKKGGSSSSGPSASKGFGFGAK--AKADKYKYSGRLKPGVLSPIREVPEEIMRPDYALDGVPKARDPPLPWMIEVKSPEDIAAMRASGLVAREVLDAVARQIKVGMTTDEIDMIVHGETVKRGAYPSPLNYHGFPKSCCTSLNEVVCHGIPDVSTVLQDGDIVNVDVTVFYKGYHGDCSETFCVGQVDEAGKKLVKVTYDAWQKAIDFCKPGRPYKDIGAIIEEYVTKEGFTTVREFCGHGLGKVFHTTPNVLHFKNSQPAGVMQPGHTFTIEPMICEGTNKHILWPDKWTATTADGRRSAQFEHTLLITPSGVEALTGRLPTSPKFFWE 393
V + VL+ + L ++AFQPSSP+ Q GRSRG+++CKKG SS SGP ASKGFGFGAK AK DK+KY+GRLKPGVLSP R+VP +I+RPDYALDG+PKARDPPLPWMIEVKSPEDIAAMRASGLVAREVLDAV RQIKVGMTTDEID I HGET+KRGAYPSPLNY GFPKSCCTSLNEVVCHGIPDVST LQDGDIVNVDVTV+YKGYHGDCSETFCVG VDEAGK+LVKVTYDAWQKAI+FCKPGRPYKDIGAIIEEYVTKEGFTTVREFCGHG+GKVFHTTPN+LHFKNSQPAGVMQPGHTFTIEPMICEGTNKHILWPDKWTATTADGRRSAQFEHTLLITPSGVEALTGRLPTSPKFFWE
Sbjct: 61 VYRSFVLLVIFLCHLSSAFQPSSPV----------QYWGRSRGDILCKKGSSSGSGPPASKGFGFGAKKEAKGDKFKYTGRLKPGVLSPPRDVPADILRPDYALDGMPKARDPPLPWMIEVKSPEDIAAMRASGLVAREVLDAVGRQIKVGMTTDEIDSIAHGETIKRGAYPSPLNYQGFPKSCCTSLNEVVCHGIPDVSTKLQDGDIVNVDVTVYYKGYHGDCSETFCVGNVDEAGKRLVKVTYDAWQKAIEFCKPGRPYKDIGAIIEEYVTKEGFTTVREFCGHGVGKVFHTTPNILHFKNSQPAGVMQPGHTFTIEPMICEGTNKHILWPDKWTATTADGRRSAQFEHTLLITPSGVEALTGRLPTSPKFFWE 426
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO02G01500.1 ID=NO02G01500.1|Name=NO02G01500.1|organism=Nannochloropsis oceanica|type=mRNA|length=2454bp CTCTATTTTGCGAATCGTACTTTTTTCGGTTTGGTTTCAATCCATTGACG GAAACATGCATCCTGTCCCTCCCTTCCGCTTGTTCACTCCACACTTTCCC GTCAGCGACCCCATTTCGTCTCCACGCTTCTCTATTCCCCTTGGGCTCCG CGTCTCATCATTCCCCCCAATCAAACCTGCGTGTGTCAATCCCCGGTGCA ATACGCACGTCATCCCGTCCTTCCTCCGCCTCCCTGAAAGCCGTGAACGC ACTCGATCGTCTACATTTATACCTGCAAGCATTTACACATATATAGCCAT GATCGCGCCCGATAGTGGCCACGTTGCTCAAGTTGCTGCTGCTTCATTTG CTCCGGACGCTGGCCTCGCAGATGATGGTGCAGACAGCGCTCGCCATGTC GCAGACTGCCCACGTGCCCCTCCTCATGGTCCTGGCGTATTTTTTCTTAC ACTGACTCGTACTCCCAGCGTGTAAGCCAAGGCTAAAAAAGAGATATGCT TAGCAAGGACAGCACCGATGATTGCTTCATCGCGCTTCATCTGCTGCGGT GCCTGTGGTCATGGTAGTCACCGTGTTTTTTGTCGTAGGGGCGGCCATAC ATACACTAGACACTTCCGGTGGCTAATGGGAAGTGGCCCCCGTTTCTAGC GCAGGGAAACAATGATTATAAGTGGGTTTGGGTGAGGGAGATATGTATAC ATATACTCATATACAGGGATATTTAGTGGAGATTTGCCTGTGGTCAAGTC AGATGCAAGCAAATTCAAGGTTTTGGTTATGCCCTCCCACTGGGCGGCAT GTCGTCTTCAAGAAATTCTCGTTGGGAAAAGCGAGCATGCTCCTTCTTTA CCCTTTCCACTCCCTTTTCCTCGATCGTAGTACGCAATGCTACCTACCCA AGGACAAGATGCACATCTTTTCCCCTGTCTAACTCTTGCCGGTTCTGCCA CCAACCTATAGGCGCACATGCACCGCTAGCCTCGCCCTCATCATCATCAT CATCATCTAAGATACTTCCCCTTGCTTGCAGTGCTCGAAATGCTGTCACC ATCATCACTCGAACGGCCCAAAGGGTTCGCCCTTATCAATCTCGTCCTGC AGTTCCTAGTCCTTGTTGCGTTGGTGCTTGGTGAGCCCGCCGCTGCCTTC CAGCCGTCCTCTCCCCTTTCCCCTTCTGGAACCACCTCGTCATCGCTGCA GCAACGCGGACGGTCTCGAGGAAACGTGGTCTGCAAAAAGGGGGGCAGCA GTAGCAGTGGGCCATCGGCGTCGAAAGGCTTTGGATTCGGGGCGAAGGCT AAGGCTGACAAGTATAAGTACAGCGGACGTCTAAAGCCGGGTGTGCTGAG CCCAATCCGAGAGGTGCCTGAGGAGATTATGCGGCCCGACTATGCATTGG ACGGTGTCCCCAAAGCCCGCGACCCCCCCTTGCCCTGGATGATCGAGGTC AAGAGCCCCGAAGACATCGCCGCCATGCGTGCCTCCGGTTTGGTTGCCCG CGAAGTGCTTGACGCTGTGGCCCGCCAAATTAAAGTAGGAATGACCACGG ACGAAATCGACATGATCGTGCACGGGGAGACAGTCAAAAGGGGCGCCTAC CCTTCTCCCTTGAATTACCACGGCTTCCCCAAATCCTGCTGCACGAGTTT GAACGAAGTGGTCTGTCACGGGATCCCCGACGTTTCCACTGTCCTTCAAG ACGGAGACATTGTCAATGTGGACGTAACAGTATTCTACAAAGGCTACCAC GGGGACTGCTCCGAAACCTTCTGCGTCGGTCAAGTAGACGAAGCCGGGAA AAAATTGGTCAAAGTCACCTACGACGCGTGGCAAAAAGCAATCGACTTTT GCAAGCCCGGGCGGCCCTACAAGGATATCGGCGCGATCATCGAAGAATAT GTCACCAAAGAGGGGTTTACCACCGTAAGAGAATTCTGCGGACATGGATT AGGAAAGGTCTTTCATACCACTCCGAACGTCCTCCATTTCAAGAACAGCC AACCCGCTGGTGTGATGCAGCCCGGGCACACCTTCACCATTGAACCAATG ATTTGTGAAGGCACGAATAAACACATTCTATGGCCTGATAAGTGGACGGC CACGACGGCAGATGGTCGACGGTCGGCGCAGTTTGAGCATACCTTGCTCA TTACCCCTTCGGGGGTTGAGGCGTTGACGGGACGCTTGCCGACGTCGCCC AAATTCTTTTGGGAAGAATAGTGGGGTGAAGGGTAAGGGATGAGAGTGTC GGTTAATAGCGTGAGGAGGTAAATGAATAGAGGAGAGGGGGGGAGACAGG GGAGAGGAAATAGCAAAGCCCGTTGAGGCCGAGTAGAGCAAATAGAAAAT GTTTAAATGTGAAATCTGATATGATGGCTGCTGTTGATGATGGTCAAAGA TTTATTTATGAAGCGAAGTGTGGTTACTCGAGAATTATCCTCCTTCATTT CTCG back to topprotein sequence of NO02G01500.1 >NO02G01500.1-protein ID=NO02G01500.1-protein|Name=NO02G01500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=394bp MLSPSSLERPKGFALINLVLQFLVLVALVLGEPAAAFQPSSPLSPSGTTS SSLQQRGRSRGNVVCKKGGSSSSGPSASKGFGFGAKAKADKYKYSGRLKP GVLSPIREVPEEIMRPDYALDGVPKARDPPLPWMIEVKSPEDIAAMRASG LVAREVLDAVARQIKVGMTTDEIDMIVHGETVKRGAYPSPLNYHGFPKSC CTSLNEVVCHGIPDVSTVLQDGDIVNVDVTVFYKGYHGDCSETFCVGQVD EAGKKLVKVTYDAWQKAIDFCKPGRPYKDIGAIIEEYVTKEGFTTVREFC GHGLGKVFHTTPNVLHFKNSQPAGVMQPGHTFTIEPMICEGTNKHILWPD KWTATTADGRRSAQFEHTLLITPSGVEALTGRLPTSPKFFWEE* back to topmRNA from alignment at chr2:442735..445520- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO02G01500.1 ID=NO02G01500.1|Name=NO02G01500.1|organism=Nannochloropsis oceanica|type=mRNA|length=2786bp|location=Sequence derived from alignment at chr2:442735..445520- (Nannochloropsis oceanica) CTCTATTTTGCGAATCGTACTTTTTTCGGTTTGGTTTCAATCCATTGACG
GAAACATGCATCCTGTCCCTCCCTTCCGCTTGTTCACTCCACACTTTCCC
GTCAGCGACCCCATTTCGTCTCCACGCTTCTCTATTCCCCTTGGGCTCCG
CGTCTCATCATTCCCCCCAATCAAACCTGCGTGTGTCAATCCCCGGTGCA
ATACGCACGTCATCCCGTCCTTCCTCCGCCTCCCTGAAAGCCGTGAACGC
ACTCGATCGTCTACATTTATACCTGCAAGCATTTACACATATATAGCCAT
GATCGCGCCCGATAGTGGCCACGTTGCTCAAGTTGCTGCTGCTTCATTTG
CTCCGGACGCTGGCCTCGCAGATGATGGTGCAGACAGCGCTCGCCATGTC
GCAGACTGCCCACGTGCCCCTCCTCATGGTCCTGGCGTATTTTTTCTTAC
ACTGACTCGTACTCCCAGCGTGTAAGCCAAGGCTAAAAAAGAGATATGCT
TAGCAAGGACAGCACCGATGATTGCTTCATCGCGCTTCATCTGCTGCGGT
GCCTGTGGTCATGGTAGTCACCGTGTTTTTTGTCGTAGGGGCGGCCATAC
ATACACTAGACACTTCCGGTGGCTAATGGGAAGTGGCCCCCGTTTCTAGC
GCAGGGAAACAATGATTATAAGTGGGTTTGGGTGAGGGAGATATGTATAC
ATATACTCATATACAGGGATATTTAGTGGAGATTTGCCTGTGGTCAAGTC
AGATGCAAGCAAATTCAAGGTTTTGGTTATGCCCTCCCACTGGGCGGCAT
GTCGTCTTCAAGAAATTCTCGTTGGGAAAAGCGAGCATGCTCCTTCTTTA
CCCTTTCCACTCCCTTTTCCTCGATCGTAGTACGCAATGCTACCTACCCA
AGGACAAGATGCACATCTTTTCCCCTGTCTAACTCTTGCCGGTTCTGCCA
CCAACCTATAGGCGCACATGCACCGCTAGCCTCGCCCTCATCATCATCAT
CATCATCTAAGATACTTCCCCTTGCTTGCAGTGCTCGAAATGCTGTCACC
ATCATCACTCGAACGGCCCAAAGGGTTCGCCCTTATCAATCTCGTCCTGC
AGTTCCTAGTCCTTGTTGCGTTGGTGCTTGGTGAGCCCGCCGCTGCCTTC
CAGCCGTCCTCTCCCCTTTCCCCTTCTGGAACCACCTCGTCATCGCTGCA
GCAACGCGGACGGTCTCGAGGAAACGTGGTCTGCAAAAAGGGGGGCAGCA
GTAGCAGTGGGCCATCGGCGTCGAAAGGCTTTGGATTCGGGGCGAAGGCT
AAGGCTGACAAGTATAAGTACAGCGGACGTCTAAAGCCGGGTGTGCTGAG
CCCAATCCGAGAGGTGCCTGAGGAGATTATGCGGCCCGACTATGCATTGG
ACGGGTACGTGCCACTCGTAGATGAGTGTATTTGCATGCGTATACAGTAA
GATACCTGTCTTTTTCTGCGCAAGTGTGGGCGAATTTGGGGGTGACGACG
CTGAGAGTATGGATGTATGAATACGTGATTTGGCTAGTTTTCTGAATGCG
GAGTGAGGAAGACTCTTTTCAGACTTTTTCACCTCTCCTGTTTGGCTCTT
TTCCTTTGCACTCTCCTCCTTTCTTCATGCCTTGATTATTGGTCACCCGC
TCGCAGCGTAAGCTGATGTCTCTCCACGCATTCTAACATCCTTCCTCCCT
CCCTTCTCCACGCACCCCACACGCAACCAACCACAGTGTCCCCAAAGCCC
GCGACCCCCCCTTGCCCTGGATGATCGAGGTCAAGAGCCCCGAAGACATC
GCCGCCATGCGTGCCTCCGGTTTGGTTGCCCGCGAAGTGCTTGACGCTGT
GGCCCGCCAAATTAAAGTAGGAATGACCACGGACGAAATCGACATGATCG
TGCACGGGGAGACAGTCAAAAGGGGCGCCTACCCTTCTCCCTTGAATTAC
CACGGCTTCCCCAAATCCTGCTGCACGAGTTTGAACGAAGTGGTCTGTCA
CGGGATCCCCGACGTTTCCACTGTCCTTCAAGACGGAGACATTGTCAATG
TGGACGTAACAGTATTCTACAAAGGCTACCACGGGGACTGCTCCGAAACC
TTCTGCGTCGGTCAAGTAGACGAAGCCGGGAAAAAATTGGTCAAAGTCAC
CTACGACGCGTGGCAAAAAGCAATCGACTTTTGCAAGCCCGGGCGGCCCT
ACAAGGATATCGGCGCGATCATCGAAGAATATGTCACCAAAGAGGGGTTT
ACCACCGTAAGAGAATTCTGCGGACATGGATTAGGAAAGGTCTTTCATAC
CACTCCGAACGTCCTCCATTTCAAGAACAGCCAACCCGCTGGTGTGATGC
AGCCCGGGCACACCTTCACCATTGAACCAATGATTTGTGAAGGCACGAAT
AAACACATTCTATGGCCTGATAAGTGGACGGCCACGACGGCAGATGGTCG
ACGGTCGGCGCAGTTTGAGCATACCTTGCTCATTACCCCTTCGGGGGTTG
AGGCGTTGACGGGACGCTTGCCGACGTCGCCCAAATTCTTTTGGGAAGAA
TAGTGGGGTGAAGGGTAAGGGATGAGAGTGTCGGTTAATAGCGTGAGGAG
GTAAATGAATAGAGGAGAGGGGGGGAGACAGGGGAGAGGAAATAGCAAAG
CCCGTTGAGGCCGAGTAGAGCAAATAGAAAATGTTTAAATGTGAAATCTG
ATATGATGGCTGCTGTTGATGATGGTCAAAGATTTATTTATGAAGCGAAG
TGTGGTTACTCGAGAATTATCCTCCTTCATTTCTCG back to topCoding sequence (CDS) from alignment at chr2:442735..445520- >NO02G01500.1 ID=NO02G01500.1|Name=NO02G01500.1|organism=Nannochloropsis oceanica|type=CDS|length=1182bp|location=Sequence derived from alignment at chr2:442735..445520- (Nannochloropsis oceanica) ATGCTGTCACCATCATCACTCGAACGGCCCAAAGGGTTCGCCCTTATCAA TCTCGTCCTGCAGTTCCTAGTCCTTGTTGCGTTGGTGCTTGGTGAGCCCG CCGCTGCCTTCCAGCCGTCCTCTCCCCTTTCCCCTTCTGGAACCACCTCG TCATCGCTGCAGCAACGCGGACGGTCTCGAGGAAACGTGGTCTGCAAAAA GGGGGGCAGCAGTAGCAGTGGGCCATCGGCGTCGAAAGGCTTTGGATTCG GGGCGAAGGCTAAGGCTGACAAGTATAAGTACAGCGGACGTCTAAAGCCG GGTGTGCTGAGCCCAATCCGAGAGGTGCCTGAGGAGATTATGCGGCCCGA CTATGCATTGGACGGTGTCCCCAAAGCCCGCGACCCCCCCTTGCCCTGGA TGATCGAGGTCAAGAGCCCCGAAGACATCGCCGCCATGCGTGCCTCCGGT TTGGTTGCCCGCGAAGTGCTTGACGCTGTGGCCCGCCAAATTAAAGTAGG AATGACCACGGACGAAATCGACATGATCGTGCACGGGGAGACAGTCAAAA GGGGCGCCTACCCTTCTCCCTTGAATTACCACGGCTTCCCCAAATCCTGC TGCACGAGTTTGAACGAAGTGGTCTGTCACGGGATCCCCGACGTTTCCAC TGTCCTTCAAGACGGAGACATTGTCAATGTGGACGTAACAGTATTCTACA AAGGCTACCACGGGGACTGCTCCGAAACCTTCTGCGTCGGTCAAGTAGAC GAAGCCGGGAAAAAATTGGTCAAAGTCACCTACGACGCGTGGCAAAAAGC AATCGACTTTTGCAAGCCCGGGCGGCCCTACAAGGATATCGGCGCGATCA TCGAAGAATATGTCACCAAAGAGGGGTTTACCACCGTAAGAGAATTCTGC GGACATGGATTAGGAAAGGTCTTTCATACCACTCCGAACGTCCTCCATTT CAAGAACAGCCAACCCGCTGGTGTGATGCAGCCCGGGCACACCTTCACCA TTGAACCAATGATTTGTGAAGGCACGAATAAACACATTCTATGGCCTGAT AAGTGGACGGCCACGACGGCAGATGGTCGACGGTCGGCGCAGTTTGAGCA TACCTTGCTCATTACCCCTTCGGGGGTTGAGGCGTTGACGGGACGCTTGC CGACGTCGCCCAAATTCTTTTGGGAAGAATAG back to top
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