NO02G01030.1, NO02G01030.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO02G01030.1
Unique NameNO02G01030.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2040
Alignment locationchr2:317342..319381 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:317342..319381 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO02G01030.1 vs.
Match: EWM30588.1 (monooxygenase fad-binding protein [Nannochloropsis gaditana])

HSP 1 Score: 755.4 bits (1949), Expect = 1.600e-214
Identity = 408/697 (58.54%), Postives = 489/697 (70.16%), Query Frame = 0 
Query:    1 MFRRSSNRISGPESPAAATGA-AFIGANDMPDDKSTITVLICGAGPVGLAAAIECLRHGLRVRIIDKELTRDPHSKAFGIHALSMEKFLAMGIAPAVLEQANCVGRVDILGRLTTVVEDFSYIPSRFKGTFMLSQRKLEDIMEAKLRSYGAEVERGVELLDLIQPEVQGEKDGETAQEASLVSSSSGNSHTVASVRDVKTGQDRRITSKYVIGSDGSHSRVRKLLQIPFNGAPYEEDFLLLDTHFTLKPGMSFGGIKVLLGEPFVAIFQLAPDILRVVTRRCDGDGIPHGSNDKSIKGVENADVEAAIAHRMKALVLARCPELASLHTVTWASIFRVHRRVVPRYSVGNVFLAGDAAHIHSPFGGQGLNTGVHDAVNLAWKLGVVERLGGNASVFLPSYHDERHPVGEETLAWTDNLTTFTAVGGLMGNLVQNVLFPLASPLLNCSPWLTEKITTRMSMLSLTYRGTSSALLSS----SSGSFTVGSPQPGDRARDGPLISLSSGAATGLLEVMSGGLRHTLLLFGEESGGEKGVEGAVRALLGNKG-------EERLW-RLRDVVALVHISRRFHSVPKTAVAL-GTGSSIGS---SSVSNSNGNSSSRKE------------------LVITPMYDEIGRVTQAFGIEVS--TGRKGNPAPLPPCLFLIRPDGYVGWRAMGWDLDGLLHYLEMLF 661
            MF R+SNR     S  +A  A      +++      +T+L+CGAGPVGL A +EC RHGL+V+IIDK LT+DPHSKAFGIHAL+MEKFLAMG+APAVLEQA+CV R+ I G  TTVVEDF +IPSRFKG FMLSQRKLEDI+EA +  YG EVERGVELLD +Q E Q +  G         + S G     A++RDVKTG++R +T KYVIG DG HSRVRKLL++PF GAPYEEDFLLLD HF++KPG  F G  VLLG+P +A+F+L   +LR +++RC GDGIP   +DK I  VENA VEAAI  R + LVL+RCPELA LH V WASIFR+HRRVVP+Y+VG+VFLAGDAAHIHSP GGQGLNTG+HDAVNLAWKLG VERLG +  + LPSY+ ERHPVGE+TLAWTD+LT++T   G +  + Q VLFP+ASPLLN S W  + IT+RMSMLSL+YRGT S LL S    +S    +GSPQPGDR  DGPL+  SSGAATGLLEV+  GL HTLL+FGE  G E G+EG    L   K        E   W RLRD+V+ VHISRRF S  K+   +   GSS  S   SS   SNG +  R+                   + +T MYDE GRV++AFG+  S  +G +GNPA    CLFL+RPDGYVGWRA  WDL GLL YLE L+
Sbjct:    1 MFHRNSNRFGRLRSSGSAAAADTATEEHEIASASEKVTILVCGAGPVGLTATLECARHGLQVKIIDKSLTKDPHSKAFGIHALTMEKFLAMGVAPAVLEQAHCVDRLRIRGDFTTVVEDFCHIPSRFKGVFMLSQRKLEDILEAHIHMYGIEVERGVELLDFVQAEDQSDASG---------TPSVGKGPMTANLRDVKTGEERNLTCKYVIGCDGCHSRVRKLLKLPFLGAPYEEDFLLLDVHFSVKPGQRFQGSSVLLGDPVIALFELDCGLLRFISKRCAGDGIPASQDDKRIADVENAAVEAAILKRFQDLVLSRCPELAGLHDVKWASIFRIHRRVVPQYNVGHVFLAGDAAHIHSPLGGQGLNTGIHDAVNLAWKLGAVERLGADPGILLPSYNAERHPVGEQTLAWTDSLTSYTMTRGFLSGVAQKVLFPIASPLLNRSTWAMKAITSRMSMLSLSYRGTPSPLLPSAALPASSLPPIGSPQPGDRVPDGPLVRFSSGAATGLLEVVCRGLDHTLLMFGEPEGME-GLEGVEDGLTVEKAVRSKLDPEVEAWRRLRDMVSFVHISRRFRSASKSVTKVDARGSSSRSHPRSSDQGSNGGAQVRERSDPIDKKSSGGRHQVRQPVALTSMYDESGRVSEAFGLNTSGQSGSRGNPA----CLFLVRPDGYVGWRAGDWDLGGLLTYLEPLY 683
The following BLAST results are available for this feature:
BLAST of NO02G01030.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM30588.11.600e-21458.54monooxygenase fad-binding protein [Nannochloropsis... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G01030NO02G01030Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO02G01030.1NO02G01030.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO02G01030.1.cds1NO02G01030.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO02G01030.1 ID=NO02G01030.1|Name=NO02G01030.1|organism=Nannochloropsis oceanica|type=mRNA|length=2040bp
ATGTTCAGACGCAGTAGCAACCGCATTAGCGGACCAGAGTCTCCCGCCGC
AGCAACAGGCGCAGCTTTTATAGGCGCAAATGATATGCCCGACGACAAGT
CCACAATTACGGTCCTGATCTGCGGGGCAGGGCCCGTTGGTCTAGCTGCT
GCCATTGAATGCCTGCGCCATGGCTTGCGCGTCCGTATTATCGACAAGGA
GCTCACGAGGGATCCGCACAGCAAGGCGTTTGGAATTCATGCGTTGTCTA
TGGAAAAATTTCTCGCGATGGGCATCGCGCCCGCGGTTTTGGAGCAAGCA
AATTGCGTCGGTCGTGTTGATATCTTGGGACGTTTAACCACTGTTGTGGA
AGACTTTTCCTACATCCCTTCTCGATTCAAGGGAACATTTATGCTGTCGC
AGCGTAAGCTCGAAGACATTATGGAAGCCAAATTGCGGTCATATGGTGCA
GAGGTGGAGCGCGGTGTGGAGCTGTTGGACTTGATTCAGCCAGAGGTGCA
GGGTGAAAAGGACGGCGAGACGGCCCAAGAAGCAAGCCTGGTGTCCTCGT
CCAGCGGCAACAGCCATACAGTTGCCAGTGTTCGCGATGTAAAAACGGGT
CAAGATAGAAGAATAACCTCTAAATACGTCATTGGATCTGACGGTAGTCA
CAGCCGTGTCCGTAAGCTTCTCCAAATACCCTTCAACGGAGCGCCTTACG
AGGAAGATTTCTTGTTGCTCGACACCCACTTTACACTCAAACCTGGCATG
AGTTTTGGGGGCATAAAAGTATTGCTAGGCGAGCCTTTTGTCGCCATCTT
TCAACTTGCGCCGGACATTTTGCGGGTCGTGACTAGGCGCTGTGACGGGG
ACGGCATCCCGCACGGCAGCAACGATAAGAGCATCAAGGGTGTGGAGAAC
GCCGACGTGGAAGCCGCCATAGCACATCGAATGAAGGCGTTGGTGTTGGC
ACGATGCCCAGAGCTAGCTTCTCTTCACACAGTGACGTGGGCGAGCATCT
TTCGAGTGCACCGCCGAGTGGTACCGAGGTACAGCGTGGGGAATGTGTTT
CTGGCTGGAGATGCGGCGCATATTCACTCGCCGTTTGGAGGACAGGGACT
GAATACAGGGGTTCATGACGCGGTTAATCTGGCGTGGAAGTTGGGGGTGG
TAGAGAGGCTTGGGGGAAATGCTTCGGTGTTTTTGCCTTCTTATCACGAC
GAGAGGCATCCGGTGGGGGAGGAAACGTTGGCCTGGACGGATAATTTGAC
TACCTTTACCGCGGTTGGAGGCTTAATGGGCAACTTGGTGCAGAATGTGT
TGTTTCCTTTGGCGAGTCCATTATTGAATTGCTCGCCGTGGTTGACGGAG
AAGATCACGACGAGGATGAGCATGTTGAGTTTAACGTATCGAGGGACCTC
GTCCGCCCTCCTGTCCTCGTCCTCGGGGTCTTTCACGGTAGGAAGCCCTC
AGCCGGGGGATAGGGCGAGGGATGGTCCGTTGATTTCGTTGTCGTCGGGG
GCGGCCACGGGATTGTTGGAGGTTATGTCCGGGGGGTTACGACATACTCT
TCTTCTTTTTGGGGAGGAGTCAGGGGGAGAGAAAGGAGTCGAGGGGGCTG
TCAGGGCTTTGTTGGGAAATAAGGGGGAGGAGAGATTGTGGCGATTGAGA
GATGTGGTGGCGCTTGTGCATATTTCTCGGCGATTTCACAGTGTGCCGAA
AACTGCTGTTGCTCTAGGTACAGGTAGTAGCATTGGCAGTAGCAGCGTCA
GCAACAGCAACGGCAACAGCAGCAGTAGGAAGGAACTTGTGATCACGCCC
ATGTACGACGAGATCGGCCGAGTCACTCAGGCCTTTGGTATCGAGGTTTC
GACGGGGAGGAAGGGCAATCCGGCGCCCCTCCCTCCCTGCCTCTTCCTGA
TCCGTCCTGATGGCTACGTCGGATGGAGGGCCATGGGATGGGATTTGGAC
GGTTTGCTGCATTATCTGGAGATGCTTTTCCTGATCGCCGGTCGTAACAG
CAGCGGCACTGGTAGTAGAAGTGATATAAGTAACCGTTAA
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protein sequence of NO02G01030.1

>NO02G01030.1-protein ID=NO02G01030.1-protein|Name=NO02G01030.1|organism=Nannochloropsis oceanica|type=polypeptide|length=680bp
MFRRSSNRISGPESPAAATGAAFIGANDMPDDKSTITVLICGAGPVGLAA
AIECLRHGLRVRIIDKELTRDPHSKAFGIHALSMEKFLAMGIAPAVLEQA
NCVGRVDILGRLTTVVEDFSYIPSRFKGTFMLSQRKLEDIMEAKLRSYGA
EVERGVELLDLIQPEVQGEKDGETAQEASLVSSSSGNSHTVASVRDVKTG
QDRRITSKYVIGSDGSHSRVRKLLQIPFNGAPYEEDFLLLDTHFTLKPGM
SFGGIKVLLGEPFVAIFQLAPDILRVVTRRCDGDGIPHGSNDKSIKGVEN
ADVEAAIAHRMKALVLARCPELASLHTVTWASIFRVHRRVVPRYSVGNVF
LAGDAAHIHSPFGGQGLNTGVHDAVNLAWKLGVVERLGGNASVFLPSYHD
ERHPVGEETLAWTDNLTTFTAVGGLMGNLVQNVLFPLASPLLNCSPWLTE
KITTRMSMLSLTYRGTSSALLSSSSGSFTVGSPQPGDRARDGPLISLSSG
AATGLLEVMSGGLRHTLLLFGEESGGEKGVEGAVRALLGNKGEERLWRLR
DVVALVHISRRFHSVPKTAVALGTGSSIGSSSVSNSNGNSSSRKELVITP
MYDEIGRVTQAFGIEVSTGRKGNPAPLPPCLFLIRPDGYVGWRAMGWDLD
GLLHYLEMLFLIAGRNSSGTGSRSDISNR*
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mRNA from alignment at chr2:317342..319381+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO02G01030.1 ID=NO02G01030.1|Name=NO02G01030.1|organism=Nannochloropsis oceanica|type=mRNA|length=2040bp|location=Sequence derived from alignment at chr2:317342..319381+ (Nannochloropsis oceanica)
ATGTTCAGACGCAGTAGCAACCGCATTAGCGGACCAGAGTCTCCCGCCGC
AGCAACAGGCGCAGCTTTTATAGGCGCAAATGATATGCCCGACGACAAGT
CCACAATTACGGTCCTGATCTGCGGGGCAGGGCCCGTTGGTCTAGCTGCT
GCCATTGAATGCCTGCGCCATGGCTTGCGCGTCCGTATTATCGACAAGGA
GCTCACGAGGGATCCGCACAGCAAGGCGTTTGGAATTCATGCGTTGTCTA
TGGAAAAATTTCTCGCGATGGGCATCGCGCCCGCGGTTTTGGAGCAAGCA
AATTGCGTCGGTCGTGTTGATATCTTGGGACGTTTAACCACTGTTGTGGA
AGACTTTTCCTACATCCCTTCTCGATTCAAGGGAACATTTATGCTGTCGC
AGCGTAAGCTCGAAGACATTATGGAAGCCAAATTGCGGTCATATGGTGCA
GAGGTGGAGCGCGGTGTGGAGCTGTTGGACTTGATTCAGCCAGAGGTGCA
GGGTGAAAAGGACGGCGAGACGGCCCAAGAAGCAAGCCTGGTGTCCTCGT
CCAGCGGCAACAGCCATACAGTTGCCAGTGTTCGCGATGTAAAAACGGGT
CAAGATAGAAGAATAACCTCTAAATACGTCATTGGATCTGACGGTAGTCA
CAGCCGTGTCCGTAAGCTTCTCCAAATACCCTTCAACGGAGCGCCTTACG
AGGAAGATTTCTTGTTGCTCGACACCCACTTTACACTCAAACCTGGCATG
AGTTTTGGGGGCATAAAAGTATTGCTAGGCGAGCCTTTTGTCGCCATCTT
TCAACTTGCGCCGGACATTTTGCGGGTCGTGACTAGGCGCTGTGACGGGG
ACGGCATCCCGCACGGCAGCAACGATAAGAGCATCAAGGGTGTGGAGAAC
GCCGACGTGGAAGCCGCCATAGCACATCGAATGAAGGCGTTGGTGTTGGC
ACGATGCCCAGAGCTAGCTTCTCTTCACACAGTGACGTGGGCGAGCATCT
TTCGAGTGCACCGCCGAGTGGTACCGAGGTACAGCGTGGGGAATGTGTTT
CTGGCTGGAGATGCGGCGCATATTCACTCGCCGTTTGGAGGACAGGGACT
GAATACAGGGGTTCATGACGCGGTTAATCTGGCGTGGAAGTTGGGGGTGG
TAGAGAGGCTTGGGGGAAATGCTTCGGTGTTTTTGCCTTCTTATCACGAC
GAGAGGCATCCGGTGGGGGAGGAAACGTTGGCCTGGACGGATAATTTGAC
TACCTTTACCGCGGTTGGAGGCTTAATGGGCAACTTGGTGCAGAATGTGT
TGTTTCCTTTGGCGAGTCCATTATTGAATTGCTCGCCGTGGTTGACGGAG
AAGATCACGACGAGGATGAGCATGTTGAGTTTAACGTATCGAGGGACCTC
GTCCGCCCTCCTGTCCTCGTCCTCGGGGTCTTTCACGGTAGGAAGCCCTC
AGCCGGGGGATAGGGCGAGGGATGGTCCGTTGATTTCGTTGTCGTCGGGG
GCGGCCACGGGATTGTTGGAGGTTATGTCCGGGGGGTTACGACATACTCT
TCTTCTTTTTGGGGAGGAGTCAGGGGGAGAGAAAGGAGTCGAGGGGGCTG
TCAGGGCTTTGTTGGGAAATAAGGGGGAGGAGAGATTGTGGCGATTGAGA
GATGTGGTGGCGCTTGTGCATATTTCTCGGCGATTTCACAGTGTGCCGAA
AACTGCTGTTGCTCTAGGTACAGGTAGTAGCATTGGCAGTAGCAGCGTCA
GCAACAGCAACGGCAACAGCAGCAGTAGGAAGGAACTTGTGATCACGCCC
ATGTACGACGAGATCGGCCGAGTCACTCAGGCCTTTGGTATCGAGGTTTC
GACGGGGAGGAAGGGCAATCCGGCGCCCCTCCCTCCCTGCCTCTTCCTGA
TCCGTCCTGATGGCTACGTCGGATGGAGGGCCATGGGATGGGATTTGGAC
GGTTTGCTGCATTATCTGGAGATGCTTTTCCTGATCGCCGGTCGTAACAG
CAGCGGCACTGGTAGTAGAAGTGATATAAGTAACCGTTAA
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Coding sequence (CDS) from alignment at chr2:317342..319381+

>NO02G01030.1 ID=NO02G01030.1|Name=NO02G01030.1|organism=Nannochloropsis oceanica|type=CDS|length=2040bp|location=Sequence derived from alignment at chr2:317342..319381+ (Nannochloropsis oceanica)
ATGTTCAGACGCAGTAGCAACCGCATTAGCGGACCAGAGTCTCCCGCCGC
AGCAACAGGCGCAGCTTTTATAGGCGCAAATGATATGCCCGACGACAAGT
CCACAATTACGGTCCTGATCTGCGGGGCAGGGCCCGTTGGTCTAGCTGCT
GCCATTGAATGCCTGCGCCATGGCTTGCGCGTCCGTATTATCGACAAGGA
GCTCACGAGGGATCCGCACAGCAAGGCGTTTGGAATTCATGCGTTGTCTA
TGGAAAAATTTCTCGCGATGGGCATCGCGCCCGCGGTTTTGGAGCAAGCA
AATTGCGTCGGTCGTGTTGATATCTTGGGACGTTTAACCACTGTTGTGGA
AGACTTTTCCTACATCCCTTCTCGATTCAAGGGAACATTTATGCTGTCGC
AGCGTAAGCTCGAAGACATTATGGAAGCCAAATTGCGGTCATATGGTGCA
GAGGTGGAGCGCGGTGTGGAGCTGTTGGACTTGATTCAGCCAGAGGTGCA
GGGTGAAAAGGACGGCGAGACGGCCCAAGAAGCAAGCCTGGTGTCCTCGT
CCAGCGGCAACAGCCATACAGTTGCCAGTGTTCGCGATGTAAAAACGGGT
CAAGATAGAAGAATAACCTCTAAATACGTCATTGGATCTGACGGTAGTCA
CAGCCGTGTCCGTAAGCTTCTCCAAATACCCTTCAACGGAGCGCCTTACG
AGGAAGATTTCTTGTTGCTCGACACCCACTTTACACTCAAACCTGGCATG
AGTTTTGGGGGCATAAAAGTATTGCTAGGCGAGCCTTTTGTCGCCATCTT
TCAACTTGCGCCGGACATTTTGCGGGTCGTGACTAGGCGCTGTGACGGGG
ACGGCATCCCGCACGGCAGCAACGATAAGAGCATCAAGGGTGTGGAGAAC
GCCGACGTGGAAGCCGCCATAGCACATCGAATGAAGGCGTTGGTGTTGGC
ACGATGCCCAGAGCTAGCTTCTCTTCACACAGTGACGTGGGCGAGCATCT
TTCGAGTGCACCGCCGAGTGGTACCGAGGTACAGCGTGGGGAATGTGTTT
CTGGCTGGAGATGCGGCGCATATTCACTCGCCGTTTGGAGGACAGGGACT
GAATACAGGGGTTCATGACGCGGTTAATCTGGCGTGGAAGTTGGGGGTGG
TAGAGAGGCTTGGGGGAAATGCTTCGGTGTTTTTGCCTTCTTATCACGAC
GAGAGGCATCCGGTGGGGGAGGAAACGTTGGCCTGGACGGATAATTTGAC
TACCTTTACCGCGGTTGGAGGCTTAATGGGCAACTTGGTGCAGAATGTGT
TGTTTCCTTTGGCGAGTCCATTATTGAATTGCTCGCCGTGGTTGACGGAG
AAGATCACGACGAGGATGAGCATGTTGAGTTTAACGTATCGAGGGACCTC
GTCCGCCCTCCTGTCCTCGTCCTCGGGGTCTTTCACGGTAGGAAGCCCTC
AGCCGGGGGATAGGGCGAGGGATGGTCCGTTGATTTCGTTGTCGTCGGGG
GCGGCCACGGGATTGTTGGAGGTTATGTCCGGGGGGTTACGACATACTCT
TCTTCTTTTTGGGGAGGAGTCAGGGGGAGAGAAAGGAGTCGAGGGGGCTG
TCAGGGCTTTGTTGGGAAATAAGGGGGAGGAGAGATTGTGGCGATTGAGA
GATGTGGTGGCGCTTGTGCATATTTCTCGGCGATTTCACAGTGTGCCGAA
AACTGCTGTTGCTCTAGGTACAGGTAGTAGCATTGGCAGTAGCAGCGTCA
GCAACAGCAACGGCAACAGCAGCAGTAGGAAGGAACTTGTGATCACGCCC
ATGTACGACGAGATCGGCCGAGTCACTCAGGCCTTTGGTATCGAGGTTTC
GACGGGGAGGAAGGGCAATCCGGCGCCCCTCCCTCCCTGCCTCTTCCTGA
TCCGTCCTGATGGCTACGTCGGATGGAGGGCCATGGGATGGGATTTGGAC
GGTTTGCTGCATTATCTGGAGATGCTTTTCCTGATCGCCGGTCGTAACAG
CAGCGGCACTGGTAGTAGAAGTGATATAAGTAACCGTTAA
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Synonyms
Publications