NO02G01000.1, NO02G01000.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO02G01000.1
Unique Name	NO02G01000.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2916
Alignment location	chr2:310309..313572 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr2	genome	chr2:310309..313572 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO02G01000.1 vs.
Match: EWM30558.1 (Cytidine deaminase-like protein [Nannochloropsis gaditana])

HSP 1 Score: 814.3 bits (2102), Expect = 4.000e-232
Identity = 527/1019 (51.72%), Postives = 624/1019 (61.24%), Query Frame = 0

Query:    6 RSSGNGGDRKNSIGSNLLHLSVIAAASSVVFLLRHKQQHQRRCLSTPSSPVHVAKEAKTEEKDKLPEAPEHAAGTLSPTPHPAQPSTPLQDTSPTTNIPQSSRSSPQASSTPIAQTPPTPFIPRAATLRKSSITRGGGLLSSSALRLSERPQAEVQERVSHALGMCPGMEEIGKRRIELMVHNVSHKDMVLSLARHP---------------PSSSSCSV--VGE----QQRHHRRTSSSNSSSNNTTEDLVLCRPKFSLFQPVSQRILQAIRSLPPSLPCPPATFPVYVRELHSSRDPAAEAPSPSFPPSSSPSSDNSTNKHGGREGKREQQRSFTLRRQRPGSASAHPDLPVGFDLSRSSYARHLAVEDLASFRVRRDDAQKLE-----------------FDPQEQQELGQQQQQKREV---------NGLHSSSSLQRLVQIDGVYFPLLASILPKWRSSLHITAGAGMTKAEDEDVFKIIFLVSGVGMPRDQTSSTEGNSTEGTAELLEEWIRWHYRDVRVVRVHSKTNIFRYDENIAFVKNELLPLVEHYRDRSAERWGTDWRYKYHLTISFADGSPARISAINAALRPYRPSFVHMWELKTFWHHAKMCLEDVEVLAFEDIDTAPPVPLSHADARAQLVAAEMLRYKEEVLHHYHQGLCSDLSTFWLRKTQKPVLAVLLIQKEGGAAPILYRGCNMEVSMPTGSLCAERNAIGSALAADLTLKRRELKIVAVLSLSFTEGGGREDGKQREGGRIRREGVGPKRLDMAFASVEKKPGKKGSGGSSSSSDGRVLTGSPHKKQEDRWNGTL-----HGGVNEQEGAAAVAVAAAATNEEGPSTPRGEKVG-RKTVFEGASPPRVTVIRSYSLKDLTLDGAGGGGGGGGSGGVGGVGGVGGPTMAERQRRPHSGSLDALDPVSSPYKEGKGMGERALGREGKEVVQSETKGGAARLSSEAMTITVDSEDLNPLRPCGACMEWLKKISEQNPEFRVATFTDEKCRGIYTEFVSTTST 972
            RS  N        G   L LS+  AASS+V  LRH++QH R      + P     E+  ++    P  P HA  T+ P                             ++S+P+A +P TP +PR +    S  +R        +  LS  P+ +VQ+RVSHAL  CPGMEE+G+RRIEL+VHNVSHKDMVLSLA  P                SS+S +V  VG        H RRTSSS        EDLVLCRPKFSLFQPVS  ILQ +        CP    PVYVRE     +P+A A  P  P SSS SS ++ +    R G    +RS+TLRRQ   S +  P+LPVGFDLS       L V+DL  FR+RRDD  KL                   DP   +  G     K +          +   S + LQ  V IDGVYFPLLA++LP WR     T  AG+    +E+VFKIIFLVSGVGMPRD TSS EGNST+GTA LLEEW++ +Y DVRVVRVHS TNIFRYDENIAFVKNELLPL+EHYRD +AERWGT WR+KY LTISFADGSPARISAINAALRPYRPSF+H WELKTFWHHAKMCLEDVEVLAFEDIDTAPPVPLSHADARA+LVA EMLRYKEEVL HY QGLC+DLSTFWLRKT+KPVLAVLL+QK+  A P+LYRGCNMEVSMPTGSLCAERNAIGSALAADLTLKRR+LK+VAVLS+SF + G    G     G  + EG   K LD  FAS++  P         + S     TG      + R  G L       G +E+ G + +A   +  ++EGP TP   + G ++ VF+G SPPR T+IRSYS+KDL               G G  G  G P+ AE + RPH+ S+D+LDP SS       +    L  +G         GG  +    AMTI V+++DLNPL+PCGACMEWLKKI+E+NPEFRVATFTDE CRGIYTEFVSTTST
Sbjct:    2 RSDDNNDASGLGAGFTFLQLSLFTAASSLVVFLRHRKQHLR---REHALPSPPITESPGKKTKASPSTPRHAGQTMRPV----------------------------SASSPVAPSPCTPCLPRHSGRHASKHSR------HVSRCLSTGPERDVQDRVSHALDTCPGMEEVGRRRIELLVHNVSHKDMVLSLATLPGLGPSRTPSEELLSRTSSTSSTVLRVGPLAPFTATHRRRTSSSAVMQ----EDLVLCRPKFSLFQPVSDAILQVVHHHI----CPSVKVPVYVRE----HNPSAPAALPG-PHSSSASSSDAPSL---RRGDMRHERSYTLRRQ---SLTTQPELPVGFDLSECP----LPVQDLTDFRLRRDDLGKLYPPLPSPRLQPPHPSPGGHDPAVTENAGGMAAAKNDSVDRDPLAGRSSPRSPAPLQDAVGIDGVYFPLLANVLPTWRK----TVAAGVGPGGEEEVFKIIFLVSGVGMPRDPTSSREGNSTQGTAALLEEWMQRNYPDVRVVRVHSTTNIFRYDENIAFVKNELLPLIEHYRDGAAERWGTSWRHKYRLTISFADGSPARISAINAALRPYRPSFMHTWELKTFWHHAKMCLEDVEVLAFEDIDTAPPVPLSHADARARLVAQEMLRYKEEVLLHYRQGLCADLSTFWLRKTEKPVLAVLLVQKDR-ARPLLYRGCNMEVSMPTGSLCAERNAIGSALAADLTLKRRDLKVVAVLSVSFGKNGNTGGGGGGGDGGRKPEGTA-KALDAVFASIDTAPRVASQTTDRNHSYSDSCTGHSIGNAQPR--GLLGPRKGDAGASERTGGSMMA---SVGDQEGPWTPSSRRTGAQEEVFDGLSPPRTTIIRSYSVKDLN--------------GCGQDGAFGKPSPAECRGRPHASSMDSLDPKSSK-STSPIIPLSNLRVDG---------GGRDQQGPGAMTIRVEADDLNPLKPCGACMEWLKKIAEKNPEFRVATFTDEACRGIYTEFVSTTST 925

The following BLAST results are available for this feature:

BLAST of NO02G01000.1 vs.

BLAST of NO02G01000.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM30558.1	4.000e-232	51.72	Cytidine deaminase-like protein [Nannochloropsis g...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO02G01000	NO02G01000	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO02G01000.1	NO02G01000.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO02G01000.1.cds1	NO02G01000.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G01000.1.cds2	NO02G01000.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G01000.1.cds3	NO02G01000.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr2:310309..313572-
coding sequence from alignment at chr2:310309..313572-

mRNA sequence

>NO02G01000.1 ID=NO02G01000.1|Name=NO02G01000.1|organism=Nannochloropsis oceanica|type=mRNA|length=2916bp
ATGAGCGGAAGTAGTAGAAGCAGTGGCAATGGAGGCGACAGGAAAAACTC
CATCGGCAGTAACCTCCTGCATCTTTCTGTCATCGCAGCCGCCTCCAGCG
TTGTTTTCCTGCTTCGACACAAGCAGCAACACCAACGCCGTTGCCTATCT
ACTCCTTCCAGTCCTGTTCATGTTGCAAAAGAAGCGAAGACAGAGGAAAA
GGATAAACTACCTGAAGCACCCGAGCATGCTGCCGGCACCCTATCACCAA
CACCCCATCCAGCACAGCCCTCCACGCCCCTTCAAGACACTTCGCCCACC
ACCAACATCCCTCAGTCCTCCCGGTCCTCACCTCAGGCTAGTAGCACCCC
CATCGCCCAAACCCCCCCTACGCCCTTCATCCCTCGCGCAGCTACCCTTC
GCAAGTCCTCTATTACCAGAGGGGGGGGGCTCTTATCCTCCTCTGCCTTG
CGGCTCAGCGAGCGACCACAAGCAGAGGTCCAAGAGAGGGTCTCGCACGC
CTTGGGCATGTGCCCAGGAATGGAGGAAATAGGCAAGCGGCGGATCGAGT
TAATGGTGCACAATGTCTCGCATAAGGACATGGTCCTATCACTTGCTCGG
CACCCTCCCTCTTCCTCCTCATGTTCAGTGGTAGGAGAACAACAGCGGCA
CCATCGACGCACTAGCAGCAGTAACAGCAGCAGCAACAACACCACCGAAG
ACCTCGTCCTTTGTCGCCCAAAATTTTCTCTCTTTCAACCCGTCAGTCAA
CGAATCTTGCAGGCCATCCGTTCCCTCCCTCCCTCCCTCCCTTGCCCCCC
TGCGACGTTTCCCGTCTATGTCCGAGAGCTGCATTCTTCCCGTGATCCTG
CCGCCGAAGCTCCCTCTCCCTCCTTCCCTCCTTCCTCCTCCCCCTCCTCG
GACAATAGTACAAACAAGCATGGAGGCAGGGAAGGAAAAAGGGAACAACA
GCGTTCGTTTACGTTGCGACGACAGCGGCCGGGCAGTGCCAGTGCTCACC
CTGACCTCCCCGTCGGCTTCGATTTATCCCGGAGCTCCTATGCGCGCCAT
CTCGCTGTGGAAGACTTGGCCAGTTTCCGGGTCCGCAGGGATGATGCCCA
GAAGCTCGAATTCGACCCGCAAGAGCAGCAAGAGCTGGGACAGCAGCAGC
AGCAGAAGCGGGAAGTCAATGGTCTTCACTCCTCCTCCTCCCTTCAACGG
CTCGTGCAAATTGACGGGGTCTACTTTCCTCTCCTTGCGAGCATCCTCCC
CAAATGGCGGTCCTCCCTTCACATCACTGCCGGGGCAGGGATGACAAAAG
CGGAGGACGAGGACGTGTTCAAAATCATTTTCCTGGTCAGTGGGGTGGGC
ATGCCCCGTGATCAAACGAGCAGCACGGAAGGGAATTCGACGGAGGGAAC
GGCGGAGTTACTGGAAGAGTGGATTAGGTGGCATTATAGGGATGTGAGGG
TGGTGAGGGTCCACAGTAAGACGAATATCTTTCGGTATGACGAGAACATA
GCGTTTGTCAAGAATGAGCTATTGCCGTTGGTGGAGCACTACAGAGACAG
GTCCGCCGAGAGGTGGGGCACAGATTGGCGCTACAAATACCACCTCACCA
TCTCCTTTGCGGATGGCTCGCCTGCGCGAATCTCCGCCATCAACGCCGCC
TTGAGGCCGTACCGTCCCAGTTTTGTGCACATGTGGGAGCTTAAGACCTT
CTGGCACCACGCCAAGATGTGCTTGGAGGACGTGGAAGTCCTTGCCTTCG
AGGACATTGACACCGCCCCCCCCGTCCCTCTCTCCCACGCGGACGCCCGG
GCCCAGCTGGTGGCCGCCGAGATGCTTCGTTACAAAGAGGAGGTCCTCCA
TCACTACCACCAAGGCCTCTGTTCCGATCTTTCCACCTTTTGGCTCCGCA
AGACCCAGAAACCTGTATTGGCCGTGTTGCTGATTCAGAAGGAGGGAGGT
GCGGCTCCTATCCTGTATAGAGGGTGTAACATGGAGGTAAGCATGCCCAC
AGGCTCATTATGCGCCGAAAGAAATGCGATTGGCTCGGCATTGGCCGCGG
ATTTGACCCTGAAGAGGAGGGAGTTAAAAATTGTGGCTGTGCTGAGTTTG
TCGTTTACGGAGGGAGGGGGGAGGGAGGATGGGAAACAGAGGGAAGGAGG
GAGGATAAGGAGGGAGGGGGTAGGACCGAAGAGGTTGGACATGGCGTTTG
CGTCGGTGGAGAAGAAGCCGGGCAAGAAGGGCAGTGGCGGCAGCAGCAGC
AGCAGCGATGGCAGAGTCTTGACGGGCTCGCCTCACAAGAAACAAGAGGA
CCGATGGAATGGAACATTGCATGGAGGAGTTAATGAGCAGGAAGGTGCAG
CAGCAGTAGCAGTAGCAGCAGCAGCAACAAACGAGGAGGGGCCCTCCACC
CCGCGAGGTGAGAAGGTCGGGAGAAAGACAGTGTTTGAAGGTGCCTCCCC
TCCGAGGGTAACCGTTATTCGCTCCTACTCACTCAAGGACCTGACTTTAG
ATGGAGCAGGAGGAGGAGGAGGAGGAGGAGGGTCAGGAGGGGTAGGAGGG
GTAGGAGGGGTAGGAGGACCAACGATGGCGGAGAGACAACGGAGGCCGCA
TTCTGGTAGCTTGGACGCATTGGATCCCGTTTCGTCACCATATAAGGAAG
GGAAAGGGATGGGAGAGCGTGCACTTGGTAGAGAAGGGAAAGAAGTAGTG
CAGAGCGAAACGAAGGGAGGGGCAGCGAGACTCAGTTCAGAGGCGATGAC
CATAACTGTTGACTCAGAGGACTTGAACCCGTTGAGGCCGTGTGGGGCGT
GCATGGAGTGGTTGAAGAAAATTTCTGAGCAGAACCCAGAATTTCGCGTG
GCAACATTTACGGACGAGAAGTGCCGAGGGATTTATACGGAGTTTGTGTC
TACAACATCGACGTAA

protein sequence of NO02G01000.1

>NO02G01000.1-protein ID=NO02G01000.1-protein|Name=NO02G01000.1|organism=Nannochloropsis oceanica|type=polypeptide|length=972bp
MSGSSRSSGNGGDRKNSIGSNLLHLSVIAAASSVVFLLRHKQQHQRRCLS
TPSSPVHVAKEAKTEEKDKLPEAPEHAAGTLSPTPHPAQPSTPLQDTSPT
TNIPQSSRSSPQASSTPIAQTPPTPFIPRAATLRKSSITRGGGLLSSSAL
RLSERPQAEVQERVSHALGMCPGMEEIGKRRIELMVHNVSHKDMVLSLAR
HPPSSSSCSVVGEQQRHHRRTSSSNSSSNNTTEDLVLCRPKFSLFQPVSQ
RILQAIRSLPPSLPCPPATFPVYVRELHSSRDPAAEAPSPSFPPSSSPSS
DNSTNKHGGREGKREQQRSFTLRRQRPGSASAHPDLPVGFDLSRSSYARH
LAVEDLASFRVRRDDAQKLEFDPQEQQELGQQQQQKREVNGLHSSSSLQR
LVQIDGVYFPLLASILPKWRSSLHITAGAGMTKAEDEDVFKIIFLVSGVG
MPRDQTSSTEGNSTEGTAELLEEWIRWHYRDVRVVRVHSKTNIFRYDENI
AFVKNELLPLVEHYRDRSAERWGTDWRYKYHLTISFADGSPARISAINAA
LRPYRPSFVHMWELKTFWHHAKMCLEDVEVLAFEDIDTAPPVPLSHADAR
AQLVAAEMLRYKEEVLHHYHQGLCSDLSTFWLRKTQKPVLAVLLIQKEGG
AAPILYRGCNMEVSMPTGSLCAERNAIGSALAADLTLKRRELKIVAVLSL
SFTEGGGREDGKQREGGRIRREGVGPKRLDMAFASVEKKPGKKGSGGSSS
SSDGRVLTGSPHKKQEDRWNGTLHGGVNEQEGAAAVAVAAAATNEEGPST
PRGEKVGRKTVFEGASPPRVTVIRSYSLKDLTLDGAGGGGGGGGSGGVGG
VGGVGGPTMAERQRRPHSGSLDALDPVSSPYKEGKGMGERALGREGKEVV
QSETKGGAARLSSEAMTITVDSEDLNPLRPCGACMEWLKKISEQNPEFRV
ATFTDEKCRGIYTEFVSTTST*

mRNA from alignment at chr2:310309..313572-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO02G01000.1 ID=NO02G01000.1|Name=NO02G01000.1|organism=Nannochloropsis oceanica|type=mRNA|length=3264bp|location=Sequence derived from alignment at chr2:310309..313572- (Nannochloropsis oceanica)
ATGAGCGGAAGTAGTAGAAGCAGTGGCAATGGAGGCGACAGGAAAAACTC
CATCGGCAGTAACCTCCTGCATCTTTCTGTCATCGCAGCCGCCTCCAGCG
TTGTTTTCCTGCTTCGACACAAGCAGCAACACCAACGCCGTTGCCTATCT
ACTCCTTCCAGTCCTGTTCATGTTGCAAAAGAAGCGAAGACAGAGGAAAA
GGATAAACTACCTGAAGCACCCGAGCATGCTGCCGGCACCCTATCACCAA
CACCCCATCCAGCACAGCCCTCCACGCCCCTTCAAGACACTTCGCCCACC
ACCAACATCCCTCAGTCCTCCCGGTCCTCACCTCAGGCTAGTAGCACCCC
CATCGCCCAAACCCCCCCTACGCCCTTCATCCCTCGCGCAGCTACCCTTC
GCAAGTCCTCTATTACCAGAGGGGGGGGGCTCTTATCCTCCTCTGCCTTG
CGGCTCAGCGAGCGACCACAAGCAGAGGTCCAAGAGAGGGTCTCGCACGC
CTTGGGCATGTGCCCAGGAATGGAGGAAATAGGCAAGCGGCGGATCGAGT
TAATGGTGCACAATGTCTCGCATAAGGACATGGTCCTATCACTTGCTCGG
CACCCTCCCTCTTCCTCCTCATGTTCAGTGGTAGGAGAACAACAGCGGCA
CCATCGACGCACTAGCAGCAGTAACAGCAGCAGCAACAACACCACCGAAG
ACCTCGTCCTTTGTCGCCCAAAATTTTCTCTCTTTCAACCCGTCAGTCAA
CGAATCTTGCAGGCCATCCGTTCCCTCCCTCCCTCCCTCCCTTGCCCCCC
TGCGACGTTTCCCGTCTATGTCCGAGAGCTGCATTCTTCCCGTGATCCTG
CCGCCGAAGCTCCCTCTCCCTCCTTCCCTCCTTCCTCCTCCCCCTCCTCG
GACAATAGTACAAACAAGCATGGAGGCAGGGAAGGAAAAAGGGAACAACA
GCGTTCGTTTACGTTGCGACGACAGCGGCCGGGCAGTGCCAGTGCTCACC
CTGACCTCCCCGTCGGCTTCGATTTATCCCGGAGCTCCTATGCGCGCCAT
CTCGCTGTGGAAGACTTGGCCAGTTTCCGGGTCCGCAGGGATGATGCCCA
GAAGCTCGAATTCGACCCGCAAGAGCAGCAAGAGCTGGGACAGCAGCAGC
AGCAGAAGCGGGAAGTCAATGGTCTTCACTCCTCCTCCTCCCTTCAACGG
CTCGTGCAAATTGACGGGGTCTACTTTCCTCTCCTTGCGAGCATCCTCCC
CAAATGGCGGTCCTCCCTTCACATCACTGCCGGGGCAGGGATGACAAAAG
CGGAGGACGAGGACGTGTTCAAAATCATTTTCCTGGTCAGTGGGGTGGGC
ATGCCCCGTGATCAAACGAGCAGCACGGAAGGGAATTCGACGGAGGGAAC
GGCGGAGTTACTGGAAGAGTGGATTAGGTGGCATTATAGGGATGTGAGGG
TGGTGAGGGTCCACAGTAAGACGAATATCTTTCGGTATGACGAGAACATA
GCGTTTGTCAAGAATGAGCTATTGCCGTTGGTGGAGCACTACAGAGACAG
GTTGGACCCTCCGTCATTTCCCCCTCGTTTTCTCTCTCTTCCTTTCTCTC
ACACTCTCTCTCTCCTTACCCCTCTCCCGATCACTTTCTCCCCCTACTTC
TTTCTCTCTCTCTCTGCCTCTCCCTCTCTTTCCCCTCCCTCCACATCTTC
CCTCTGTGCACAAGTTCATGGACGGTTGGAGGGCTGAATGAATACAGGTG
CGTTTTTGGTGATTAATCCTCCCTCTCTTCCTCTCTCCCTCTAACCTTAG
GTCCGCCGAGAGGTGGGGCACAGATTGGCGCTACAAATACCACCTCACCA
TCTCCTTTGCGGATGGCTCGCCTGCGCGAATCTCCGCCATCAACGCCGCC
TTGAGGCCGTACCGTCCCAGTTTTGTGCACATGTGGGAGCTTAAGACCTT
CTGGCACCACGCCAAGATGTGCTTGGAGGACGTGGAAGTCCTTGCCTTCG
AGGTATGGCCCCTTCCCCCCCTTTCCCCTCTCCCTCTTGCGACACAATGA
GTGTGAACCTCTTGTTCCTTCCTTCTTCCCTTCCTTCCTCCCTCCCCCAG
GACATTGACACCGCCCCCCCCGTCCCTCTCTCCCACGCGGACGCCCGGGC
CCAGCTGGTGGCCGCCGAGATGCTTCGTTACAAAGAGGAGGTCCTCCATC
ACTACCACCAAGGCCTCTGTTCCGATCTTTCCACCTTTTGGCTCCGCAAG
ACCCAGAAACCTGTATTGGCCGTGTTGCTGATTCAGAAGGAGGGAGGTGC
GGCTCCTATCCTGTATAGAGGGTGTAACATGGAGGTAAGCATGCCCACAG
GCTCATTATGCGCCGAAAGAAATGCGATTGGCTCGGCATTGGCCGCGGAT
TTGACCCTGAAGAGGAGGGAGTTAAAAATTGTGGCTGTGCTGAGTTTGTC
GTTTACGGAGGGAGGGGGGAGGGAGGATGGGAAACAGAGGGAAGGAGGGA
GGATAAGGAGGGAGGGGGTAGGACCGAAGAGGTTGGACATGGCGTTTGCG
TCGGTGGAGAAGAAGCCGGGCAAGAAGGGCAGTGGCGGCAGCAGCAGCAG
CAGCGATGGCAGAGTCTTGACGGGCTCGCCTCACAAGAAACAAGAGGACC
GATGGAATGGAACATTGCATGGAGGAGTTAATGAGCAGGAAGGTGCAGCA
GCAGTAGCAGTAGCAGCAGCAGCAACAAACGAGGAGGGGCCCTCCACCCC
GCGAGGTGAGAAGGTCGGGAGAAAGACAGTGTTTGAAGGTGCCTCCCCTC
CGAGGGTAACCGTTATTCGCTCCTACTCACTCAAGGACCTGACTTTAGAT
GGAGCAGGAGGAGGAGGAGGAGGAGGAGGGTCAGGAGGGGTAGGAGGGGT
AGGAGGGGTAGGAGGACCAACGATGGCGGAGAGACAACGGAGGCCGCATT
CTGGTAGCTTGGACGCATTGGATCCCGTTTCGTCACCATATAAGGAAGGG
AAAGGGATGGGAGAGCGTGCACTTGGTAGAGAAGGGAAAGAAGTAGTGCA
GAGCGAAACGAAGGGAGGGGCAGCGAGACTCAGTTCAGAGGCGATGACCA
TAACTGTTGACTCAGAGGACTTGAACCCGTTGAGGCCGTGTGGGGCGTGC
ATGGAGTGGTTGAAGAAAATTTCTGAGCAGAACCCAGAATTTCGCGTGGC
AACATTTACGGACGAGAAGTGCCGAGGGATTTATACGGAGTTTGTGTCTA
CAACATCGACGTAA

Coding sequence (CDS) from alignment at chr2:310309..313572-

>NO02G01000.1 ID=NO02G01000.1|Name=NO02G01000.1|organism=Nannochloropsis oceanica|type=CDS|length=2916bp|location=Sequence derived from alignment at chr2:310309..313572- (Nannochloropsis oceanica)
ATGAGCGGAAGTAGTAGAAGCAGTGGCAATGGAGGCGACAGGAAAAACTC
CATCGGCAGTAACCTCCTGCATCTTTCTGTCATCGCAGCCGCCTCCAGCG
TTGTTTTCCTGCTTCGACACAAGCAGCAACACCAACGCCGTTGCCTATCT
ACTCCTTCCAGTCCTGTTCATGTTGCAAAAGAAGCGAAGACAGAGGAAAA
GGATAAACTACCTGAAGCACCCGAGCATGCTGCCGGCACCCTATCACCAA
CACCCCATCCAGCACAGCCCTCCACGCCCCTTCAAGACACTTCGCCCACC
ACCAACATCCCTCAGTCCTCCCGGTCCTCACCTCAGGCTAGTAGCACCCC
CATCGCCCAAACCCCCCCTACGCCCTTCATCCCTCGCGCAGCTACCCTTC
GCAAGTCCTCTATTACCAGAGGGGGGGGGCTCTTATCCTCCTCTGCCTTG
CGGCTCAGCGAGCGACCACAAGCAGAGGTCCAAGAGAGGGTCTCGCACGC
CTTGGGCATGTGCCCAGGAATGGAGGAAATAGGCAAGCGGCGGATCGAGT
TAATGGTGCACAATGTCTCGCATAAGGACATGGTCCTATCACTTGCTCGG
CACCCTCCCTCTTCCTCCTCATGTTCAGTGGTAGGAGAACAACAGCGGCA
CCATCGACGCACTAGCAGCAGTAACAGCAGCAGCAACAACACCACCGAAG
ACCTCGTCCTTTGTCGCCCAAAATTTTCTCTCTTTCAACCCGTCAGTCAA
CGAATCTTGCAGGCCATCCGTTCCCTCCCTCCCTCCCTCCCTTGCCCCCC
TGCGACGTTTCCCGTCTATGTCCGAGAGCTGCATTCTTCCCGTGATCCTG
CCGCCGAAGCTCCCTCTCCCTCCTTCCCTCCTTCCTCCTCCCCCTCCTCG
GACAATAGTACAAACAAGCATGGAGGCAGGGAAGGAAAAAGGGAACAACA
GCGTTCGTTTACGTTGCGACGACAGCGGCCGGGCAGTGCCAGTGCTCACC
CTGACCTCCCCGTCGGCTTCGATTTATCCCGGAGCTCCTATGCGCGCCAT
CTCGCTGTGGAAGACTTGGCCAGTTTCCGGGTCCGCAGGGATGATGCCCA
GAAGCTCGAATTCGACCCGCAAGAGCAGCAAGAGCTGGGACAGCAGCAGC
AGCAGAAGCGGGAAGTCAATGGTCTTCACTCCTCCTCCTCCCTTCAACGG
CTCGTGCAAATTGACGGGGTCTACTTTCCTCTCCTTGCGAGCATCCTCCC
CAAATGGCGGTCCTCCCTTCACATCACTGCCGGGGCAGGGATGACAAAAG
CGGAGGACGAGGACGTGTTCAAAATCATTTTCCTGGTCAGTGGGGTGGGC
ATGCCCCGTGATCAAACGAGCAGCACGGAAGGGAATTCGACGGAGGGAAC
GGCGGAGTTACTGGAAGAGTGGATTAGGTGGCATTATAGGGATGTGAGGG
TGGTGAGGGTCCACAGTAAGACGAATATCTTTCGGTATGACGAGAACATA
GCGTTTGTCAAGAATGAGCTATTGCCGTTGGTGGAGCACTACAGAGACAG
GTCCGCCGAGAGGTGGGGCACAGATTGGCGCTACAAATACCACCTCACCA
TCTCCTTTGCGGATGGCTCGCCTGCGCGAATCTCCGCCATCAACGCCGCC
TTGAGGCCGTACCGTCCCAGTTTTGTGCACATGTGGGAGCTTAAGACCTT
CTGGCACCACGCCAAGATGTGCTTGGAGGACGTGGAAGTCCTTGCCTTCG
AGGACATTGACACCGCCCCCCCCGTCCCTCTCTCCCACGCGGACGCCCGG
GCCCAGCTGGTGGCCGCCGAGATGCTTCGTTACAAAGAGGAGGTCCTCCA
TCACTACCACCAAGGCCTCTGTTCCGATCTTTCCACCTTTTGGCTCCGCA
AGACCCAGAAACCTGTATTGGCCGTGTTGCTGATTCAGAAGGAGGGAGGT
GCGGCTCCTATCCTGTATAGAGGGTGTAACATGGAGGTAAGCATGCCCAC
AGGCTCATTATGCGCCGAAAGAAATGCGATTGGCTCGGCATTGGCCGCGG
ATTTGACCCTGAAGAGGAGGGAGTTAAAAATTGTGGCTGTGCTGAGTTTG
TCGTTTACGGAGGGAGGGGGGAGGGAGGATGGGAAACAGAGGGAAGGAGG
GAGGATAAGGAGGGAGGGGGTAGGACCGAAGAGGTTGGACATGGCGTTTG
CGTCGGTGGAGAAGAAGCCGGGCAAGAAGGGCAGTGGCGGCAGCAGCAGC
AGCAGCGATGGCAGAGTCTTGACGGGCTCGCCTCACAAGAAACAAGAGGA
CCGATGGAATGGAACATTGCATGGAGGAGTTAATGAGCAGGAAGGTGCAG
CAGCAGTAGCAGTAGCAGCAGCAGCAACAAACGAGGAGGGGCCCTCCACC
CCGCGAGGTGAGAAGGTCGGGAGAAAGACAGTGTTTGAAGGTGCCTCCCC
TCCGAGGGTAACCGTTATTCGCTCCTACTCACTCAAGGACCTGACTTTAG
ATGGAGCAGGAGGAGGAGGAGGAGGAGGAGGGTCAGGAGGGGTAGGAGGG
GTAGGAGGGGTAGGAGGACCAACGATGGCGGAGAGACAACGGAGGCCGCA
TTCTGGTAGCTTGGACGCATTGGATCCCGTTTCGTCACCATATAAGGAAG
GGAAAGGGATGGGAGAGCGTGCACTTGGTAGAGAAGGGAAAGAAGTAGTG
CAGAGCGAAACGAAGGGAGGGGCAGCGAGACTCAGTTCAGAGGCGATGAC
CATAACTGTTGACTCAGAGGACTTGAACCCGTTGAGGCCGTGTGGGGCGT
GCATGGAGTGGTTGAAGAAAATTTCTGAGCAGAACCCAGAATTTCGCGTG
GCAACATTTACGGACGAGAAGTGCCGAGGGATTTATACGGAGTTTGTGTC
TACAACATCGACGTAA

Synonyms

Publications