NO02G00940.1, NO02G00940.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO02G00940.1
Unique NameNO02G00940.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4437
Alignment locationchr2:294826..299443 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:294826..299443 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO02G00940.1 vs.
Match: EWM30556.1 (hypothetical protein Naga_100033g32 [Nannochloropsis gaditana])

HSP 1 Score: 357.1 bits (915), Expect = 1.200e-94
Identity = 268/565 (47.43%), Postives = 330/565 (58.41%), Query Frame = 0
Query:  134 EFICIDDSDDEENSASCPPPRPPHPAIPSPALAVRPSASEAAAVRTLSVAARAHPLSQSIPASLAAPPSSAAAFPRLVPPQPTHQRSSSS----NNSSSCAAAGGFVAYMRGNTGGSNPFAGAAAAAAAAAYQRQAGSGSGEGGGGGWGGGSSITSMEQAQLRVLGMGGLGFGGQFIQGGGARGMESPMPLPPGGIPGGGGGGMAGMPPRPGCIPPYIPGRYPQASDWGAGRGEEGGKRPYGPGGQENDKRMRAEGKG-GWEGGVEVKKEKEPRPIQATPAELAAAMKLKATTGMGLEEGLTALRVNRFNPEEAVKWYIEASQQNRMEMALVHHASIESEKANDEYRKVESARQEQLMREGDVLGGGDFKDSTLVGGEGREGGSEAVGAFLRRFCCL-KAERFETEGMGDEGVARRRELVVKLLIKEKEAVRFYKHNAVAYMKALANRLDAAAAMGGGKGGNDGKD----VLPLSLLEEEAEALESALTKYPEGNVGGVPAQFLKYSSVGLDLDQDGLEVVSESG--------EGGEGEEGAVSDGKEGGRRRSTVRECIEVMDD 681
            E ICIDDSDDE + A+                A  PS+S AA    +  A+   P++      L + P +         P P H  +  +    N   S  ++  F+AYMRG TGG NPFAGA+AAAA+     Q  SG+  GGGG  GG +     + AQLRVLG+  +G    F    G    + P PL       GG G    MP  P         + P       G+ ++ G+  Y       +KR+RA+ KG G  G  EVKKE+E RPIQAT  EL AA  L+A TGMG+EEGLTALR N F+PE+AV WY+EASQQ  MEMALVHHASIESE+ NDEYR+ E  +QE+LM+EGDV+G   F  STL+     E GS AV AFLRR+C      R  + G  +  VARRRELVVKLLIKEKEAVRFYK  A  YMKALA RLD AA  GGG  G +GK+     LPL+ LE EA ALE+ALTKYPEGNVGGVP QFLKY+S   D ++DGLEVV E G        + G G    V++GKE G++R+ V ECIE+++D
Sbjct:   19 EIICIDDSDDERDVATS---------------AQAPSSSSAAGAAEIPAAS---PVTAHRRDPLRSEPGNL--------PHPHHGSNQGAIKDTNGRPSSGSSLSFMAYMRGTTGGVNPFAGASAAAAS-----QLCSGAA-GGGGAMGGFNGSEREDLAQLRVLGLSEMG---TFSNRTGEPEGDKPFPL-------GGVGRPPDMPDGP---------KRPHNGHACPGKADKEGESEY-------EKRLRADEKGEGVAGTREVKKERERRPIQATARELEAARDLQAKTGMGIEEGLTALRANNFDPEKAVMWYVEASQQGGMEMALVHHASIESERLNDEYRRAEMRKQEELMKEGDVIGSAKFAASTLL---AEEDGSRAVHAFLRRYCSRGGGRRGRSRGHEEASVARRRELVVKLLIKEKEAVRFYKAAAHGYMKALAKRLDGAA--GGGGEGEEGKEDEGGQLPLTCLEHEAMALENALTKYPEGNVGGVPVQFLKYASPASDFEEDGLEVVGEGGREEGGGNHQAGNGGGAGVAEGKE-GKKRTGVVECIEILED 519          
The following BLAST results are available for this feature:
BLAST of NO02G00940.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM30556.11.200e-9447.43hypothetical protein Naga_100033g32 [Nannochlorops... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G00940NO02G00940Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO02G00940.1NO02G00940.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO02G00940.1.cds1NO02G00940.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO02G00940.1.cds2NO02G00940.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO02G00940.1 ID=NO02G00940.1|Name=NO02G00940.1|organism=Nannochloropsis oceanica|type=mRNA|length=4437bp
GTTGCCGTGCGGTATTGTTGCTTCTTTTAAATCTTCCCTTCGCGGCCAGG
GCGAAAGAAAAGTGGAGAGAAAAGACCCATTTTTTTCCATAGCCCTGCGG
CATAGCTCGACGCTGCTGTCACTACTGCTGCTGCTCCTGCTATCAACCAC
TGCTCCTGCTATCGACTACTTCAGTGCTACACGCATATGCTCTTTTACAG
AGGACAACGAGGACGTATCAAACACTCAATGTATAGACAAATTCGAGTGA
AACAGTAGGACCACACTGTACAAAAAGAAAGAAAGAAAGGGCACTAAGAT
TCCAAAATGGCTAACTAACCATACAATTTCTGGTCCAGGAGTATATACAC
ACATTGACACGCTTTGCACACTCAATGATCTCCCTCATTCACCGCATTCC
TTCAATCTCTATTCTTGTCCATCTCGCCCTTCCCTCCAACACGTGCCTGA
AACAGATAGGTCCTCATAAAATCCTTTTTCTCTTTCCGAGGAACAACCGG
AAGTCCCCACAACCCAAAATTCGCTCCTTCCTCTCCCACCGTCACCACCT
CCACGCCCTCAAACCCCAAATCAGCTACAGCCGTCTCAGGCACTTCCATC
GCAGAGGAAAACGTGCTGGTGAGCCACTTGTTGCTTGCTTGCTCTCGCAG
GGAGGTCAAAGTGAAGTCATTGATGTGATCCGCAAGCAAAATGCTCCCAG
GAGCGGACTCCGCTTGAATGGCCCGTAATAATGTCTGTGCCCGCGATGCT
TCAAAGTAGTAAAGAAAGCCTTCTAAGATCCAGATTGTTTTTTTGCGCGG
GTCAAAGCCTGCGGACTTTAGAGTATTTACCCATGCGACGTCATCAGAAA
AATCTGTGATCAATCGATGCATTCCCCGGGCGAGTAAGGGAAAGCGATCT
GTGACGCTTGCCAGGATTCGGCTCTTGTAGTCCAGGACGGGTTTCACGTC
AAGTTCAAAGATATGGCATTGCCGGAGTTCCTTGAGGCGGTGGCTACGGA
GGAAATGGGTGGGAGGGAGGAAGGAAGGAACCGAGAGAGGGAAAGTGAAT
AGACCGAGCGAAGGAAAGCGATCTGAGAAGTCCTTTCAGGGCTTCTCAGA
AGACGCGACCTGGAAATAGATAGTGAATGCGCCTGTCTTCGCGTGCCTTA
ATGTGTCGCCAAGCTGTACATTTCCCCGCGCCGTTCCGTCTTCCTTCCTT
CCCGTCATCCTCTTCCCCCCACACTCACCCGCGCGCGTCCATCCCTGCGC
CACAGAGCACCACTTGCGTCAGCTCTGGGTCTACGGTCAATGCCTTTGTT
ATTTTATTGTCCATCCAATGGGTGCGAATTGCCACAACAGGGTAGACGGC
ATTGGTAGCCTTGCTTGCACGCTCGCTTTCGATTATGTCAGCTCCTGCTA
GAATCGCGGCCAAAGGGTCCTGAACAACCTCCTCAAATAGGAAGCGGGCA
CCAGCGCAACGACGAGAGGACAAGGCCACGTCTTCATCGATGGGGCATGC
CATCTCTCTGTCTGTTGCCGTTGGGGGGCCAGGCGGAGGGGCAGGCTTGC
TGCTGCTACTGCTGCTGCTGCCGCTGGAGGCTTGGGCAGCAAGTATGTAG
GTCGTGCAGAGGAGAAAGGAAATCAGCAGCAAGGGCGGGCGGCGATAAGG
CATTCCGTCGTAGACCTTGCCCGCACTGCTTGTATTGCCTGCCTGTCTGT
GACATTGCATGCGAAGAAAGGGACGAGGGAGTTAAATTGAGGGTGTGTCA
AACCGAGACGCATCATGCATTTGGCGAAGCTTCCGAGTCCGCAAAAACGC
ACAGCTGCCCCTATGCCTTCCTTTGCCTTCCGTTCCCAAACCATCCCCAC
ATCCACTCCCACTTACACACTTGCACATAAACAGGCACCTCCAGTAGATT
TCTGTTCGCCGCCAGAAGGAGCAAAGTACGCGATCGCAAAGGCCTAGCAT
TAGCGAGCTAGCCTCCCCACCCCCTCTTCCTTCTTCCCCAAGGCTTCCTC
GTTTGGTATTCCTGCCAGGCTTACCGCCACAAGCCCCACTCGACCGCCAT
GGTCAACCATGCAGCCATCGCCTCCAGATTAAGAATCCCCCTCAGTGTTG
TCCAGAGACGATTTACAGAGCCCCAGATGATGAAGAAATTTAGCGTCAAG
GAGCTCAAGATCATCACCGAGTACCTCCGCGACATCACGCAAGAAGGCCG
CACCATTGTTAAGGGCACGTCAGCACTCAGTAAAGCGGATTTACTGGAGA
AAATAGAGCTTTTGGTTGCTCTGAACTCAAACTCAACAGGGGATGGCAAT
AGCACCGGCAGCAACAACAGCAACAGCAGCCACAGCACCGGTAGCTCCTC
CTCTGTGTCGTCGTCATCCGATCTGGATCTGGCGGCAGCAATTTCAGCCA
GCGATGCGATGTCCCCTCCCCTTCTTCCTCCCTCTCGACCACCAATTGAG
TTTATTTGTATCGACGATTCCGATGACGAAGAGAACAGCGCCTCTTGTCC
TCCTCCCCGTCCACCTCACCCAGCAATACCATCACCAGCATTGGCAGTGC
GACCATCAGCGTCAGAGGCAGCAGCAGTTAGAACGTTATCTGTAGCAGCA
CGGGCACATCCCCTTTCTCAATCTATTCCTGCCTCTCTCGCCGCTCCCCC
CTCCTCCGCCGCCGCCTTCCCCCGACTTGTCCCTCCTCAACCTACTCATC
AACGCTCCAGCAGCAGCAACAACAGTAGTAGTTGTGCTGCTGCGGGTGGA
TTCGTCGCCTACATGCGAGGCAACACCGGAGGAAGCAATCCCTTCGCTGG
CGCTGCTGCGGCTGCAGCTGCTGCAGCTTATCAACGTCAAGCTGGCAGTG
GGAGTGGAGAAGGAGGAGGAGGAGGGTGGGGAGGTGGAAGCAGTATCACA
TCGATGGAACAGGCGCAGTTACGGGTGTTGGGGATGGGGGGTTTGGGTTT
TGGCGGGCAATTTATCCAAGGCGGAGGCGCGAGAGGCATGGAGAGTCCGA
TGCCGTTGCCACCTGGGGGGATACCCGGTGGAGGCGGAGGAGGGATGGCG
GGGATGCCTCCACGCCCTGGTTGTATCCCGCCCTATATCCCGGGGCGATA
CCCTCAGGCATCTGACTGGGGAGCGGGCAGGGGAGAAGAGGGCGGGAAGC
GGCCATATGGGCCGGGCGGGCAGGAGAATGACAAGCGTATGCGTGCGGAA
GGGAAGGGAGGGTGGGAGGGAGGAGTGGAAGTGAAGAAGGAGAAGGAGCC
CCGCCCGATTCAGGCGACGCCTGCTGAGCTTGCTGCTGCGATGAAATTGA
AGGCAACCACGGGCATGGGCCTGGAAGAGGGGCTGACGGCGTTGAGGGTG
AATAGATTTAACCCGGAGGAGGCAGTTAAGTGGTACATTGAGGCAAGTCA
GCAGAATCGGATGGAGATGGCTTTGGTGCATCACGCGAGCATTGAGAGTG
AGAAGGCCAATGATGAGTACAGGAAGGTGGAGAGCGCGAGGCAGGAGCAG
TTGATGCGGGAGGGGGATGTGCTGGGAGGAGGTGATTTCAAGGACTCGAC
CTTGGTGGGGGGGGAAGGAAGGGAGGGAGGAAGCGAAGCGGTGGGTGCGT
TTTTGAGAAGGTTTTGTTGCTTGAAGGCTGAGAGGTTTGAAACGGAGGGG
ATGGGGGACGAAGGGGTGGCGCGCCGGAGGGAGCTGGTTGTGAAGCTGTT
GATCAAGGAGAAGGAGGCGGTAAGGTTCTACAAGCACAACGCTGTGGCTT
ATATGAAGGCGTTGGCGAATCGGTTGGATGCCGCAGCGGCGATGGGAGGT
GGGAAGGGAGGGAACGACGGGAAAGATGTGTTGCCGTTGTCGCTGCTTGA
GGAGGAGGCGGAGGCGTTGGAAAGCGCGTTGACAAAGTACCCGGAAGGAA
ACGTTGGGGGAGTCCCTGCCCAGTTTTTGAAGTACTCGAGCGTGGGGCTT
GACCTGGATCAGGATGGATTGGAGGTCGTGTCAGAGAGCGGGGAGGGAGG
CGAAGGGGAAGAGGGGGCAGTGTCGGACGGGAAGGAAGGTGGGAGAAGGA
GGTCGACGGTGAGAGAGTGTATAGAGGTGATGGATGATTAAAATGGTAGA
ACGAGGGAGGGAGGGAAAGAGGGCGGGTGTGCACATGGGTTACGATGCAG
ATGAAGGCATCCAAAGAAACGCGGGATATTTATGGGAGGAGCTCGCCATT
GAAAGTCGCCAAAAATGCAGATCAAAATATAGCAAATGTATGTACAACAT
AGAGACAACGTGCACCAGACGACTGCGGTAGATTCCTCCTCCTTCCCTAT
TTCACCCCACTATTCACCATCAGAGCGGCAGTGTCAGAGAAGAGTAAAGG
CAAAAATGACGGCTAGTGAGCGAAAGAGTAGGTGACAATACACCCGAAGC
ACAACCAAAGCAGATTCCTGAAACAAATTTCAACGGA
back to top

protein sequence of NO02G00940.1

>NO02G00940.1-protein ID=NO02G00940.1-protein|Name=NO02G00940.1|organism=Nannochloropsis oceanica|type=polypeptide|length=681bp
MVNHAAIASRLRIPLSVVQRRFTEPQMMKKFSVKELKIITEYLRDITQEG
RTIVKGTSALSKADLLEKIELLVALNSNSTGDGNSTGSNNSNSSHSTGSS
SSVSSSSDLDLAAAISASDAMSPPLLPPSRPPIEFICIDDSDDEENSASC
PPPRPPHPAIPSPALAVRPSASEAAAVRTLSVAARAHPLSQSIPASLAAP
PSSAAAFPRLVPPQPTHQRSSSSNNSSSCAAAGGFVAYMRGNTGGSNPFA
GAAAAAAAAAYQRQAGSGSGEGGGGGWGGGSSITSMEQAQLRVLGMGGLG
FGGQFIQGGGARGMESPMPLPPGGIPGGGGGGMAGMPPRPGCIPPYIPGR
YPQASDWGAGRGEEGGKRPYGPGGQENDKRMRAEGKGGWEGGVEVKKEKE
PRPIQATPAELAAAMKLKATTGMGLEEGLTALRVNRFNPEEAVKWYIEAS
QQNRMEMALVHHASIESEKANDEYRKVESARQEQLMREGDVLGGGDFKDS
TLVGGEGREGGSEAVGAFLRRFCCLKAERFETEGMGDEGVARRRELVVKL
LIKEKEAVRFYKHNAVAYMKALANRLDAAAAMGGGKGGNDGKDVLPLSLL
EEEAEALESALTKYPEGNVGGVPAQFLKYSSVGLDLDQDGLEVVSESGEG
GEGEEGAVSDGKEGGRRRSTVRECIEVMDD*
back to top

mRNA from alignment at chr2:294826..299443+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO02G00940.1 ID=NO02G00940.1|Name=NO02G00940.1|organism=Nannochloropsis oceanica|type=mRNA|length=4618bp|location=Sequence derived from alignment at chr2:294826..299443+ (Nannochloropsis oceanica)
GTTGCCGTGCGGTATTGTTGCTTCTTTTAAATCTTCCCTTCGCGGCCAGG GCGAAAGAAAAGTGGAGAGAAAAGACCCATTTTTTTCCATAGCCCTGCGG CATAGCTCGACGCTGCTGTCACTACTGCTGCTGCTCCTGCTATCAACCAC TGCTCCTGCTATCGACTACTTCAGTGCTACACGCATATGCTCTTTTACAG AGGACAACGAGGACGTATCAAACACTCAATGTATAGACAAATTCGAGTGA AACAGTAGGACCACACTGTACAAAAAGAAAGAAAGAAAGGGCACTAAGAT TCCAAAATGGCTAACTAACCATACAATTTCTGGTCCAGGAGTATATACAC ACATTGACACGCTTTGCACACTCAATGATCTCCCTCATTCACCGCATTCC TTCAATCTCTATTCTTGTCCATCTCGCCCTTCCCTCCAACACGTGCCTGA AACAGATAGGTCCTCATAAAATCCTTTTTCTCTTTCCGAGGAACAACCGG AAGTCCCCACAACCCAAAATTCGCTCCTTCCTCTCCCACCGTCACCACCT CCACGCCCTCAAACCCCAAATCAGCTACAGCCGTCTCAGGCACTTCCATC GCAGAGGAAAACGTGCTGGTGAGCCACTTGTTGCTTGCTTGCTCTCGCAG GGAGGTCAAAGTGAAGTCATTGATGTGATCCGCAAGCAAAATGCTCCCAG GAGCGGACTCCGCTTGAATGGCCCGTAATAATGTCTGTGCCCGCGATGCT TCAAAGTAGTAAAGAAAGCCTTCTAAGATCCAGATTGTTTTTTTGCGCGG GTCAAAGCCTGCGGACTTTAGAGTATTTACCCATGCGACGTCATCAGAAA AATCTGTGATCAATCGATGCATTCCCCGGGCGAGTAAGGGAAAGCGATCT GTGACGCTTGCCAGGATTCGGCTCTTGTAGTCCAGGACGGGTTTCACGTC AAGTTCAAAGATATGGCATTGCCGGAGTTCCTTGAGGCGGTGGCTACGGA GGAAATGGGTGGGAGGGAGGAAGGAAGGAACCGAGAGAGGGAAAGTGAAT AGACCGAGCGAAGGAAAGCGATCTGAGAAGTCCTTTCAGGGCTTCTCAGA AGACGCGACCTGGAAATAGATAGTGAATGCGCCTGTCTTCGCGTGCCTTA ATGTGTCGCCAAGCTGTACATTTCCCCGCGCCGTTCCGTCTTCCTTCCTT CCCGTCATCCTCTTCCCCCCACACTCACCCGCGCGCGTCCATCCCTGCGC CACAGAGCACCACTTGCGTCAGCTCTGGGTCTACGGTCAATGCCTTTGTT ATTTTATTGTCCATCCAATGGGTGCGAATTGCCACAACAGGGTAGACGGC ATTGGTAGCCTTGCTTGCACGCTCGCTTTCGATTATGTCAGCTCCTGCTA GAATCGCGGCCAAAGGGTCCTGAACAACCTCCTCAAATAGGAAGCGGGCA CCAGCGCAACGACGAGAGGACAAGGCCACGTCTTCATCGATGGGGCATGC CATCTCTCTGTCTGTTGCCGTTGGGGGGCCAGGCGGAGGGGCAGGCTTGC TGCTGCTACTGCTGCTGCTGCCGCTGGAGGCTTGGGCAGCAAGTATGTAG GTCGTGCAGAGGAGAAAGGAAATCAGCAGCAAGGGCGGGCGGCGATAAGG CATTCCGTCGTAGACCTTGCCCGCACTGCTTGTATTGCCTGCCTGTCTGT GACATTGCATGCGAAGAAAGGGACGAGGGAGTTAAATTGAGGGTGTGTCA AACCGAGACGCATCATGCATTTGGCGAAGCTTCCGAGTCCGCAAAAACGC ACAGCTGCCCCTATGCCTTCCTTTGCCTTCCGTTCCCAAACCATCCCCAC ATCCACTCCCACTTACACACTTGCACATAAACAGGCACCTCCAGTAGATT TCTGTTCGCCGCCAGAAGGAGCAAAGTACGCGATCGCAAAGGCCTAGCAT TAGCGAGCTAGCCTCCCCACCCCCTCTTCCTTCTTCCCCAAGGCTTCCTC GTTTGGTATTCCTGCCAGGCTTACCGCCACAAGCCCCACTCGACCGCCAT GGTCAACCATGCAGCCATCGCCTCCAGATTAAGAATCCCCCTCAGTGTTG TCCAGAGACGATTTACAGAGCCCCAGATGATGAAGAAATTTAGCGTCAAG GAGCTCAAGGTATGAGTCCTCTCGTTACATCACCTTCATTTCTTCTGTCG TACCAGTGAATCATCCTCCTTCCTCCTTTCCACTTTTTATTCCCGCTAGC GAGAGTTGTCTACAGACTCCTTCACACGTCCTTTGTCCGCCTCCCTCCCT CCCTCTCTCCCCCCATCTCTTTCCCCTTCTCCCTCTTGAGATCATCACCG AGTACCTCCGCGACATCACGCAAGAAGGCCGCACCATTGTTAAGGGCACG TCAGCACTCAGTAAAGCGGATTTACTGGAGAAAATAGAGCTTTTGGTTGC TCTGAACTCAAACTCAACAGGGGATGGCAATAGCACCGGCAGCAACAACA GCAACAGCAGCCACAGCACCGGTAGCTCCTCCTCTGTGTCGTCGTCATCC GATCTGGATCTGGCGGCAGCAATTTCAGCCAGCGATGCGATGTCCCCTCC CCTTCTTCCTCCCTCTCGACCACCAATTGAGTTTATTTGTATCGACGATT CCGATGACGAAGAGAACAGCGCCTCTTGTCCTCCTCCCCGTCCACCTCAC CCAGCAATACCATCACCAGCATTGGCAGTGCGACCATCAGCGTCAGAGGC AGCAGCAGTTAGAACGTTATCTGTAGCAGCACGGGCACATCCCCTTTCTC AATCTATTCCTGCCTCTCTCGCCGCTCCCCCCTCCTCCGCCGCCGCCTTC CCCCGACTTGTCCCTCCTCAACCTACTCATCAACGCTCCAGCAGCAGCAA CAACAGTAGTAGTTGTGCTGCTGCGGGTGGATTCGTCGCCTACATGCGAG GCAACACCGGAGGAAGCAATCCCTTCGCTGGCGCTGCTGCGGCTGCAGCT GCTGCAGCTTATCAACGTCAAGCTGGCAGTGGGAGTGGAGAAGGAGGAGG AGGAGGGTGGGGAGGTGGAAGCAGTATCACATCGATGGAACAGGCGCAGT TACGGGTGTTGGGGATGGGGGGTTTGGGTTTTGGCGGGCAATTTATCCAA GGCGGAGGCGCGAGAGGCATGGAGAGTCCGATGCCGTTGCCACCTGGGGG GATACCCGGTGGAGGCGGAGGAGGGATGGCGGGGATGCCTCCACGCCCTG GTTGTATCCCGCCCTATATCCCGGGGCGATACCCTCAGGCATCTGACTGG GGAGCGGGCAGGGGAGAAGAGGGCGGGAAGCGGCCATATGGGCCGGGCGG GCAGGAGAATGACAAGCGTATGCGTGCGGAAGGGAAGGGAGGGTGGGAGG GAGGAGTGGAAGTGAAGAAGGAGAAGGAGCCCCGCCCGATTCAGGCGACG CCTGCTGAGCTTGCTGCTGCGATGAAATTGAAGGCAACCACGGGCATGGG CCTGGAAGAGGGGCTGACGGCGTTGAGGGTGAATAGATTTAACCCGGAGG AGGCAGTTAAGTGGTACATTGAGGCAAGTCAGCAGAATCGGATGGAGATG GCTTTGGTGCATCACGCGAGCATTGAGAGTGAGAAGGCCAATGATGAGTA CAGGAAGGTGGAGAGCGCGAGGCAGGAGCAGTTGATGCGGGAGGGGGATG TGCTGGGAGGAGGTGATTTCAAGGACTCGACCTTGGTGGGGGGGGAAGGA AGGGAGGGAGGAAGCGAAGCGGTGGGTGCGTTTTTGAGAAGGTTTTGTTG CTTGAAGGCTGAGAGGTTTGAAACGGAGGGGATGGGGGACGAAGGGGTGG CGCGCCGGAGGGAGCTGGTTGTGAAGCTGTTGATCAAGGAGAAGGAGGCG GTAAGGTTCTACAAGCACAACGCTGTGGCTTATATGAAGGCGTTGGCGAA TCGGTTGGATGCCGCAGCGGCGATGGGAGGTGGGAAGGGAGGGAACGACG GGAAAGATGTGTTGCCGTTGTCGCTGCTTGAGGAGGAGGCGGAGGCGTTG GAAAGCGCGTTGACAAAGTACCCGGAAGGAAACGTTGGGGGAGTCCCTGC CCAGTTTTTGAAGTACTCGAGCGTGGGGCTTGACCTGGATCAGGATGGAT TGGAGGTCGTGTCAGAGAGCGGGGAGGGAGGCGAAGGGGAAGAGGGGGCA GTGTCGGACGGGAAGGAAGGTGGGAGAAGGAGGTCGACGGTGAGAGAGTG TATAGAGGTGATGGATGATTAAAATGGTAGAACGAGGGAGGGAGGGAAAG AGGGCGGGTGTGCACATGGGTTACGATGCAGATGAAGGCATCCAAAGAAA CGCGGGATATTTATGGGAGGAGCTCGCCATTGAAAGTCGCCAAAAATGCA GATCAAAATATAGCAAATGTATGTACAACATAGAGACAACGTGCACCAGA CGACTGCGGTAGATTCCTCCTCCTTCCCTATTTCACCCCACTATTCACCA TCAGAGCGGCAGTGTCAGAGAAGAGTAAAGGCAAAAATGACGGCTAGTGA GCGAAAGAGTAGGTGACAATACACCCGAAGCACAACCAAAGCAGATTCCT GAAACAAATTTCAACGGA
back to top

Coding sequence (CDS) from alignment at chr2:294826..299443+

>NO02G00940.1 ID=NO02G00940.1|Name=NO02G00940.1|organism=Nannochloropsis oceanica|type=CDS|length=2043bp|location=Sequence derived from alignment at chr2:294826..299443+ (Nannochloropsis oceanica)
ATGGTCAACCATGCAGCCATCGCCTCCAGATTAAGAATCCCCCTCAGTGT
TGTCCAGAGACGATTTACAGAGCCCCAGATGATGAAGAAATTTAGCGTCA
AGGAGCTCAAGATCATCACCGAGTACCTCCGCGACATCACGCAAGAAGGC
CGCACCATTGTTAAGGGCACGTCAGCACTCAGTAAAGCGGATTTACTGGA
GAAAATAGAGCTTTTGGTTGCTCTGAACTCAAACTCAACAGGGGATGGCA
ATAGCACCGGCAGCAACAACAGCAACAGCAGCCACAGCACCGGTAGCTCC
TCCTCTGTGTCGTCGTCATCCGATCTGGATCTGGCGGCAGCAATTTCAGC
CAGCGATGCGATGTCCCCTCCCCTTCTTCCTCCCTCTCGACCACCAATTG
AGTTTATTTGTATCGACGATTCCGATGACGAAGAGAACAGCGCCTCTTGT
CCTCCTCCCCGTCCACCTCACCCAGCAATACCATCACCAGCATTGGCAGT
GCGACCATCAGCGTCAGAGGCAGCAGCAGTTAGAACGTTATCTGTAGCAG
CACGGGCACATCCCCTTTCTCAATCTATTCCTGCCTCTCTCGCCGCTCCC
CCCTCCTCCGCCGCCGCCTTCCCCCGACTTGTCCCTCCTCAACCTACTCA
TCAACGCTCCAGCAGCAGCAACAACAGTAGTAGTTGTGCTGCTGCGGGTG
GATTCGTCGCCTACATGCGAGGCAACACCGGAGGAAGCAATCCCTTCGCT
GGCGCTGCTGCGGCTGCAGCTGCTGCAGCTTATCAACGTCAAGCTGGCAG
TGGGAGTGGAGAAGGAGGAGGAGGAGGGTGGGGAGGTGGAAGCAGTATCA
CATCGATGGAACAGGCGCAGTTACGGGTGTTGGGGATGGGGGGTTTGGGT
TTTGGCGGGCAATTTATCCAAGGCGGAGGCGCGAGAGGCATGGAGAGTCC
GATGCCGTTGCCACCTGGGGGGATACCCGGTGGAGGCGGAGGAGGGATGG
CGGGGATGCCTCCACGCCCTGGTTGTATCCCGCCCTATATCCCGGGGCGA
TACCCTCAGGCATCTGACTGGGGAGCGGGCAGGGGAGAAGAGGGCGGGAA
GCGGCCATATGGGCCGGGCGGGCAGGAGAATGACAAGCGTATGCGTGCGG
AAGGGAAGGGAGGGTGGGAGGGAGGAGTGGAAGTGAAGAAGGAGAAGGAG
CCCCGCCCGATTCAGGCGACGCCTGCTGAGCTTGCTGCTGCGATGAAATT
GAAGGCAACCACGGGCATGGGCCTGGAAGAGGGGCTGACGGCGTTGAGGG
TGAATAGATTTAACCCGGAGGAGGCAGTTAAGTGGTACATTGAGGCAAGT
CAGCAGAATCGGATGGAGATGGCTTTGGTGCATCACGCGAGCATTGAGAG
TGAGAAGGCCAATGATGAGTACAGGAAGGTGGAGAGCGCGAGGCAGGAGC
AGTTGATGCGGGAGGGGGATGTGCTGGGAGGAGGTGATTTCAAGGACTCG
ACCTTGGTGGGGGGGGAAGGAAGGGAGGGAGGAAGCGAAGCGGTGGGTGC
GTTTTTGAGAAGGTTTTGTTGCTTGAAGGCTGAGAGGTTTGAAACGGAGG
GGATGGGGGACGAAGGGGTGGCGCGCCGGAGGGAGCTGGTTGTGAAGCTG
TTGATCAAGGAGAAGGAGGCGGTAAGGTTCTACAAGCACAACGCTGTGGC
TTATATGAAGGCGTTGGCGAATCGGTTGGATGCCGCAGCGGCGATGGGAG
GTGGGAAGGGAGGGAACGACGGGAAAGATGTGTTGCCGTTGTCGCTGCTT
GAGGAGGAGGCGGAGGCGTTGGAAAGCGCGTTGACAAAGTACCCGGAAGG
AAACGTTGGGGGAGTCCCTGCCCAGTTTTTGAAGTACTCGAGCGTGGGGC
TTGACCTGGATCAGGATGGATTGGAGGTCGTGTCAGAGAGCGGGGAGGGA
GGCGAAGGGGAAGAGGGGGCAGTGTCGGACGGGAAGGAAGGTGGGAGAAG
GAGGTCGACGGTGAGAGAGTGTATAGAGGTGATGGATGATTAA
back to top
Synonyms
Publications