NO02G00870.1, NO02G00870.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO02G00870.1
Unique Name	NO02G00870.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2466
Alignment location	chr2:279377..284434 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr2	genome	chr2:279377..284434 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO02G00870.1 vs.
Match: EWM30580.1 (Helicase-associated domain protein [Nannochloropsis gaditana])

HSP 1 Score: 1337.0 bits (3459), Expect = 0.000e+0
Identity = 663/721 (91.96%), Postives = 693/721 (96.12%), Query Frame = 0

Query:    1 MSKRPFDSG----VG--MGGARKQRIDLSDLKPAGGGNGGGIAGQGTVNPYTNRQYSSRYFDILSKRRGLPVYEFLDELLTKVKKNQVIVVEGETGSGKTTQIPQFLVDAGYTRDGHCVACTQPRRVAAMSIAKRVSEEMDVTLGEEVGYTIRFEDCSSQKTILKFLTDGMLLREAMFDPHLEKYKVIVLDEAHERTLATDVLMGLLKEVLQRRPDMKMVVMSATLDAEKFQKYFGDAPLLRVPGRMFKVEVFYTPEPERDYVQAAIRTTLQIHLCEEPGDVLVFLTGEEEIEDACRKIRDESLNYTSTHGELAVFPLYSSLPPIQQQKIFSDAPGPKVPGGPPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRVRVESLLVSPISKASAQQRSGRAGRTRPGKCFRLYTEKSFQKDLQEQTYPEILRSQMSNVVLTLLKLGVDDLVHFDFMDPPAPETLARALEELNYLGAISDEGLITQMGHKMSELPLDPQAAKMVLSSPDYNCSNEILTIVSMLSVPQVFMRPKEAAKRADEAKAQFAHVDGDHLTLLNAYHAYKQQGGNKDWCWENFINVRSMGSAENVRSQLERMLTRMEVPLVSPDFNSPDYYTRIKKALTAGGYMQIAHLQRTGQYLTVKDHQIVSIHPSSVLDMKPPWVLYADFVLTSKNYIRTITAVECDWLLEIAPHYYDLANFPKGETKNELEACAKRLYQL 716
            MSKR FDSG    VG  MG  RKQRIDL+DL+P G GNGG IA  G +NPYTNR YSS+Y DIL+KRRGLPVYEFLD+LL KVKKNQV+VVEGETGSGKTTQIPQFLVDAGYTRDG+CVACTQPRRVAAMSIAKRVSEEMDVT+GEEVGYTIRFEDCS  KT+LKFLTDGMLLREAMFDP L+KYKVIVLDEAHERTLATDVLMGLLK+VLQRRPDMKMVVMSATLDAEKFQKYFGDAPLLRVPGRMFKVEVFYTPEPERDYVQAAIRT LQIHLCEEPGD+LVFLTGEEEIEDACRKIRDES NYTSTHGELAV+PLYSSLPP QQQKIFS+APGP+ PG PPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRVRVESLLVSPIS+ASAQQRSGRAGRTRPGKCFRLYTEKSFQKDLQEQTYPEILRSQMSNVVLTLLKLGV+DLVHFDFMDPPAPETLARALEELNYLGAISDEGLITQMGH+MSELPLDPQAAKMVLS+PD+ CSNEILTIVSMLSVPQVFMRPKEAAKRADEAKAQFAHVDGDHLTLLNAYHAYKQ GG+KDWCW+NFINVRSMGSAENVR+QLERMLTRMEVPL+SPDFN+PDYYTRIKKALTAGGYMQ+AHLQ+TGQYLTVKDHQIVSIHPSSVLDMKPPWVLYADFVLTSKNYIRT+TAVEC+WLLEIAPHYYDLANFPKGETKNELEACAKRLYQL
Sbjct:    1 MSKRGFDSGPMGGVGGEMGQTRKQRIDLADLRPGGSGNGG-IAPVGGINPYTNRPYSSKYHDILAKRRGLPVYEFLDDLLAKVKKNQVVVVEGETGSGKTTQIPQFLVDAGYTRDGYCVACTQPRRVAAMSIAKRVSEEMDVTMGEEVGYTIRFEDCSGPKTVLKFLTDGMLLREAMFDPMLKKYKVIVLDEAHERTLATDVLMGLLKDVLQRRPDMKMVVMSATLDAEKFQKYFGDAPLLRVPGRMFKVEVFYTPEPERDYVQAAIRTALQIHLCEEPGDILVFLTGEEEIEDACRKIRDESANYTSTHGELAVYPLYSSLPPTQQQKIFSEAPGPQAPGAPPGRKVVVSTNIAETSLTIDGIVYVVDPGFSKQKIYNPRVRVESLLVSPISRASAQQRSGRAGRTRPGKCFRLYTEKSFQKDLQEQTYPEILRSQMSNVVLTLLKLGVEDLVHFDFMDPPAPETLARALEELNYLGAISDEGLITQMGHRMSELPLDPQAAKMVLSAPDFGCSNEILTIVSMLSVPQVFMRPKEAAKRADEAKAQFAHVDGDHLTLLNAYHAYKQHGGSKDWCWDNFINVRSMGSAENVRTQLERMLTRMEVPLLSPDFNAPDYYTRIKKALTAGGYMQVAHLQKTGQYLTVKDHQIVSIHPSSVLDMKPPWVLYADFVLTSKNYIRTVTAVECEWLLEIAPHYYDLANFPKGETKNELEACAKRLYQL 720

The following BLAST results are available for this feature:

BLAST of NO02G00870.1 vs.

BLAST of NO02G00870.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM30580.1	0.000e+0	91.96	Helicase-associated domain protein [Nannochloropsi...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO02G00870	NO02G00870	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO02G00870.1	NO02G00870.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO02G00870.1.cds1	NO02G00870.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00870.1.cds2	NO02G00870.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00870.1.cds3	NO02G00870.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00870.1.cds4	NO02G00870.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00870.1.cds5	NO02G00870.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00870.1.cds6	NO02G00870.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00870.1.cds7	NO02G00870.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00870.1.cds8	NO02G00870.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00870.1.cds9	NO02G00870.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00870.1.cds10	NO02G00870.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00870.1.cds11	NO02G00870.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00870.1.cds12	NO02G00870.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00870.1.cds13	NO02G00870.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr2:279377..284434-
coding sequence from alignment at chr2:279377..284434-

mRNA sequence

>NO02G00870.1 ID=NO02G00870.1|Name=NO02G00870.1|organism=Nannochloropsis oceanica|type=mRNA|length=2466bp
AAAACAATAGACGCGGCGGAGGAAGCCGACCTCCTCCCTCCACCCTTTGC
TTGGGTAGCCTTCCACTCCATTCCTCCTCGTACACAGCGGCGCCGCACTA
ACCAGGAGCAGTAGTGCAGCTAGAGCACGGCAGCATGAGCAAGCGTCCAT
TTGACAGTGGCGTGGGTATGGGTGGCGCGCGCAAGCAACGTATTGATTTG
TCGGACCTGAAGCCTGCTGGAGGTGGTAATGGTGGTGGGATTGCAGGCCA
AGGCACCGTAAATCCCTACACGAATAGGCAGTATAGCTCAAGATACTTTG
ATATCCTGTCGAAGCGACGGGGTTTGCCGGTGTACGAGTTTTTGGACGAG
CTCTTGACCAAGGTGAAGAAGAACCAGGTGATCGTCGTGGAAGGTGAAAC
CGGCTCTGGTAAGACAACCCAAATTCCCCAGTTCCTGGTCGATGCCGGCT
ACACCCGCGATGGGCACTGTGTGGCCTGCACGCAGCCTCGGCGAGTGGCA
GCCATGAGCATCGCGAAGCGTGTGTCGGAGGAGATGGACGTGACACTCGG
GGAGGAAGTAGGGTACACCATCCGATTTGAAGACTGCAGCAGTCAGAAGA
CGATTTTGAAATTTTTAACGGACGGGATGCTGTTAAGGGAGGCCATGTTC
GATCCGCACTTGGAGAAGTATAAGGTCATTGTGTTGGACGAAGCCCACGA
GCGTACCCTCGCAACTGATGTTCTGATGGGCCTGCTCAAAGAGGTCCTGC
AACGACGGCCGGACATGAAGATGGTGGTAATGTCCGCCACCCTAGACGCG
GAGAAGTTCCAGAAGTACTTTGGAGATGCCCCGTTGCTGCGTGTGCCGGG
GCGCATGTTTAAGGTGGAGGTGTTCTATACCCCCGAGCCCGAGAGGGATT
ACGTCCAGGCCGCCATTAGGACGACACTGCAGATCCACCTCTGCGAGGAA
CCTGGTGACGTCCTAGTCTTCCTCACGGGTGAGGAGGAGATCGAGGACGC
CTGCCGCAAGATCCGAGACGAGAGTTTGAACTACACCAGCACCCACGGAG
AGCTGGCGGTGTTCCCCCTCTACTCCTCCCTCCCTCCCATCCAACAGCAG
AAAATTTTTTCCGACGCTCCCGGGCCGAAGGTACCCGGAGGACCGCCGGG
GCGGAAGGTGGTGGTGTCGACAAATATCGCCGAAACGTCGTTGACGATTG
ATGGCATCGTCTATGTTGTGGACCCCGGTTTCTCCAAGCAGAAGATTTAC
AACCCTCGCGTTCGCGTGGAGTCCCTCCTCGTCTCTCCCATCTCCAAGGC
CAGCGCGCAACAACGCAGCGGCCGTGCCGGTCGAACTCGTCCTGGGAAAT
GCTTCCGTCTCTACACCGAGAAGAGCTTCCAGAAAGACTTGCAGGAACAA
ACATACCCGGAAATTCTGAGGAGTCAGATGAGCAATGTGGTGCTGACCCT
CCTCAAGCTCGGGGTGGATGACCTCGTTCACTTCGACTTTATGGACCCCC
CGGCCCCCGAGACCTTGGCTCGGGCGTTGGAGGAGCTGAATTACCTCGGG
GCCATCTCGGACGAAGGACTCATTACGCAGATGGGGCACAAGATGTCGGA
GCTTCCCCTCGACCCCCAGGCGGCCAAGATGGTCCTTAGCTCCCCCGACT
ACAACTGCTCCAACGAGATCCTTACCATCGTGTCCATGCTGAGCGTTCCT
CAGGTCTTCATGCGCCCCAAGGAAGCCGCCAAGCGCGCCGACGAGGCCAA
GGCACAGTTTGCGCACGTGGACGGCGACCACTTGACGCTCCTCAACGCCT
ATCACGCCTACAAACAGCAGGGGGGCAACAAGGACTGGTGCTGGGAAAAT
TTCATCAACGTCCGCTCCATGGGCAGCGCCGAAAACGTGCGGAGCCAATT
GGAAAGGATGCTGACCCGCATGGAGGTGCCCCTCGTTTCCCCCGACTTTA
ACTCTCCAGATTATTATACCCGGATTAAAAAGGCCCTCACCGCTGGCGGC
TACATGCAGATCGCCCACTTACAGAGAACGGGGCAGTACCTAACTGTCAA
GGACCACCAGATCGTTTCGATCCACCCATCGTCTGTGTTGGACATGAAGC
CTCCATGGGTGCTGTACGCGGACTTTGTCCTCACCAGCAAGAATTATATT
CGCACGATCACGGCGGTGGAGTGCGACTGGCTCCTGGAGATCGCCCCTCA
TTACTACGACCTGGCCAATTTCCCCAAGGGCGAGACCAAGAATGAGCTCG
AGGCGTGCGCCAAGCGGCTCTATCAACTTTGAACTCATGGGAGGGAGGGA
CGGAGGGAAGGAGGGGAGGAGGGAGGACGGATAGGTGACATACATGCCTG
GGAGTGCGCGCACGGATGCGCGTATGATATTGTGTGGCTGTGTGTTGGCC
TTGTAGTAATAATGACGAGATGAACAAATTCAAAAAGGATACAACAGACG
AAAGCGAGAACGACGA

protein sequence of NO02G00870.1

>NO02G00870.1-protein ID=NO02G00870.1-protein|Name=NO02G00870.1|organism=Nannochloropsis oceanica|type=polypeptide|length=716bp
MSKRPFDSGVGMGGARKQRIDLSDLKPAGGGNGGGIAGQGTVNPYTNRQY
SSRYFDILSKRRGLPVYEFLDELLTKVKKNQVIVVEGETGSGKTTQIPQF
LVDAGYTRDGHCVACTQPRRVAAMSIAKRVSEEMDVTLGEEVGYTIRFED
CSSQKTILKFLTDGMLLREAMFDPHLEKYKVIVLDEAHERTLATDVLMGL
LKEVLQRRPDMKMVVMSATLDAEKFQKYFGDAPLLRVPGRMFKVEVFYTP
EPERDYVQAAIRTTLQIHLCEEPGDVLVFLTGEEEIEDACRKIRDESLNY
TSTHGELAVFPLYSSLPPIQQQKIFSDAPGPKVPGGPPGRKVVVSTNIAE
TSLTIDGIVYVVDPGFSKQKIYNPRVRVESLLVSPISKASAQQRSGRAGR
TRPGKCFRLYTEKSFQKDLQEQTYPEILRSQMSNVVLTLLKLGVDDLVHF
DFMDPPAPETLARALEELNYLGAISDEGLITQMGHKMSELPLDPQAAKMV
LSSPDYNCSNEILTIVSMLSVPQVFMRPKEAAKRADEAKAQFAHVDGDHL
TLLNAYHAYKQQGGNKDWCWENFINVRSMGSAENVRSQLERMLTRMEVPL
VSPDFNSPDYYTRIKKALTAGGYMQIAHLQRTGQYLTVKDHQIVSIHPSS
VLDMKPPWVLYADFVLTSKNYIRTITAVECDWLLEIAPHYYDLANFPKGE
TKNELEACAKRLYQL*

mRNA from alignment at chr2:279377..284434-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO02G00870.1 ID=NO02G00870.1|Name=NO02G00870.1|organism=Nannochloropsis oceanica|type=mRNA|length=5058bp|location=Sequence derived from alignment at chr2:279377..284434- (Nannochloropsis oceanica)
AAAACAATAGACGCGGCGGAGGAAGCCGACCTCCTCCCTCCACCCTTTGC
TTGGGTAGCCTTCCACTCCATTCCTCCTCGTACACAGCGGCGCCGCACTA
ACCAGGAGCAGTAGTGCAGCTAGAGCACGGCAGCATGAGCAAGCGTCCAT
TTGACAGTGGCGTGGGTATGGGTGGCGCGCGCAAGCAACGTATTGATTTG
TCGGACCTGAAGCCTGCTGGAGGTGGTAATGGTGGTGGGATTGCAGGCCA
AGGCACCGTAAATCCCTACACGAATAGGCAGTATAGCTCAAGATACTTTG
ATATCCTGTCGAAGCGACGGGGTTTGCCGGTGTACGAGTTTTTGGACGAG
CTCTTGACCAAGGTGAAGAAGAACCAGGTATGTATATGGCTGGATGTGGT
GCGTGGAGGTCGAGGGAGTAGATGGCGCGGTATGGGCTCTTTACCACCAA
CAATAGCACACTTCGAGCGCGTGTCCAGTCACAACGTGATCTTGACAGTG
ATGTATTTTCCCCTCACCTCTTCACTACCTCCTTCCATCTCCTCCCTTCC
TCCCTCCTTCCCCTCCTCCCGTCAGGTGATCGTCGTGGAAGGTGAAACCG
GCTCTGGTAAGACAACCCAAATTCCCCAGTTCCTGGTCGATGCCGGCTAC
ACCCGCGATGGGCACTGTGTGGCCTGCACGCAGCCTCGGCGAGTGGCAGC
CATGAGCATCGCGAAGCGTGTGTCGGAGGAGATGGACGTGACACTCGGGG
AGGAAGTAGGGTACACCATCCGATTTGAAGACTGCAGCAGTCAGAAGACG
ATTTTGAAATTTTTAACGGACGGGATGCTGTTAAGGGAGGCCATGTTCGA
TCCGCACTTGGAGAAGTATAAGGTCATTGTGTTGGACGAAGGTAGACAGG
GAGGGAGGGAGGTAGGATGGGCGATGAATCTCTGTTCTTTACCTGTATGT
ATTTGACGTGGTCGTTTAAGCTGATGGATAGATTCTGTGGTTTCCAAAAG
ATAAGCCCACCCCTCTCTCCCTCCCTCCTTCTATTCCCCCTTCCTTCAGC
CCACGAGCGTACCCTCGCAACTGATGTTCTGATGGGCCTGCTCAAAGAGG
TCCTGCAACGACGGCCGGACATGAAGATGGTGGTAATGTCCGCCACCCTA
GACGCGGAGAAGTTCCAGAAGTACTTTGGAGATGTGAGGAGGGAGGGAGG
GAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGGAACATGG
CAACCATCAGCTGCCGCTGCAAGCGGAGTATCCACTCACACCCTTTCTTC
CCCCCTTCTCTTCCCTTCTGTCCCTCCCTCCTTCCCTCCGTCCGTCCTTC
TCCTCCTTCTCCTCCAGGCCCCGTTGCTGCGTGTGCCGGGGCGCATGTTT
AAGGTGGAGGTGTTCTATACCCCCGAGCCCGAGAGGGATTACGTCCAGGC
CGCCATTAGGACGACACTGCAGGTATGTCGCAAGGAGGGAGGGAAGGAGA
TGTAAATGCGCACCCCCCGACATCACTCTTTCCATCGCGGTGTTCTAGAA
GGAACCATCACCGGCGGCGGCTCCAGTCGTGGGCAGATCATACACCCCTC
CGGTTTTTTCCCTTGCCTTCCCTTTCTTTTCTCCTTCTCCTTTGCCACTT
CTTCTTTTCTTCGTCATTTCCTCTCGCATCTTGCAGGAGGGAAGGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGGGTTGAAGATGG
AGGTCGGAGAATACAAACCACCGGGCTCGGTGTCCTACGCCGTGCTTGGC
ATATCTATTCCCCACATATATATATATACATATATATATATGTATATGTA
AAATAGATTTATATAGATATATTGACCGCTAAGTAGACAAGGATAAATAT
GTAAAACGATATGCTTCTATTCTCTCCTTCCCCTTCTCTTCCAACCAACT
GATTACTAGGCCACGCTGACCCTCCCTCCCCCCACCACTTCCCCACAGAT
CCACCTCTGCGAGGAACCTGGTGACGTCCTAGTCTTCCTCACGGGTGAGG
AGGAGATCGAGGACGCCTGCCGCAAGATCCGAGACGAGAGTTTGAACTAC
ACCAGCACCCACGGAGAGCTGGCGGTGTTCCCCCTCTACTCCTCCCTCCC
TCCCATCCAACAGCAGAAAATTTTTTCCGACGCTCCCGGGCCGAAGGTAC
CCGGAGGACCGCCGGGGCGGAAGGTGGTGGTGTCGACAAATATCGCCGAA
ACGTCGTTGACGATTGATGGTAAGGGGGGGAGGGTGTAAGGCTGGGAGAA
GGAGAGTGAAGGGGAGTTCGGGCACATGGGTGAATGGAAGTGTGTGTGGT
TTTGAAATGCCTGGAGAACGCTTGAGCTTTGATTATTTCCTCTCGTCCTC
CCTCCCTCAGGCATCGTCTATGTTGTGGACCCCGGTTTCTCCAAGCAGAA
GATTTACAACCCTCGCGTTCGCGTGGAGTCCCTCCTCGTCTCTCCCATCT
CCAAGGCCAGGTCCGCCCCTCCTTCCCTCCCTCCTTCCCTCCTTCCCTCC
GTTCCTACGAGACGTGCAACTTAATCTTTTCTCCTTCCCTTCCTCCCTCC
CCCCTCCCTCCTTCCCAGCGCGCAACAACGCAGCGGCCGTGCCGGTCGAA
CTCGTCCTGGGAAATGCTTCCGTCTCTACACCGAGAAGAGCTTCCAGAAA
GACTTGCAGGAACAAACATACCCGGAAATTCTGAGGAGTCAGATGAGCAA
TGTGGTACGTGTCGAGGGAAAGCGGGAAGGGACGCTTCTCGTGACGAGAG
ATGGTCGAATTTGTCTGATTTAATGCCCCAGAAATCTTTGGGAATCGTGC
TCTCTCAGGGGTCTCTCTTCCCCTTATTTTCATGCCCTCCCTCCCTCCCT
CCCTCCCTCCTCCCCGCGTGGTGAGCGTATGCTGGGCGACATTTCTCCTC
CATTCTCGCTTTCCAGTCTATGATCCACGCCAGAACCAATCTTTATCGGG
CACAAGGCCATTATTACTAGGGATTTGTCTCCACAACTCCTCTAGTTTGT
CACCCTGCGCACATTTGTCCACTACCCATGCCCCCCCTTCCTTCCTTCCC
TCCTCCCCTCCCTTCCTCCTGCCTCTCTTCTCACCCTCTGTGTCCTTGTC
TCTTTCCTCTCTCTCCCTGCTTCCTTTCCTTCCTCCCCCCTTCCTTTCCA
TATGTCGACACATGACATCATCGCTCACCACTTTTTTCTTCCTTTCCCCC
CTTCTCCCTCCCTTCATCCCTCAGGTGCTGACCCTCCTCAAGCTCGGGGT
GGATGACCTCGTTCACTTCGACTTTATGGACCCCCCGGCCCCCGAGACCT
TGGCTCGGGCGTTGGAGGAGCTGAATTACCTCGGGGCCATCTCGGACGAA
GGACTCATTACGCAGGTAAGAGGGAAGGAGAGACAGGCACCGGAGTGAGG
GCTTTGGCACGTGCGGAACGACCAAAGGAAGTGACATGACGCATACCACA
CTAATTTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTTTCTA
GATGGGGCACAAGATGTCGGAGCTTCCCCTCGACCCCCAGGCGGCCAAGA
TGGTCCTTAGCTCCCCCGACTACAACTGCTCCAACGAGATCCTTACCATC
GTGTCCATGCTGAGCGTTCCTCAGGTCTTCATGCGCCCCAAGGAAGCCGC
CAAGCGCGCCGACGAGGCCAAGGCACAGGTAGGGCCGGGGCGAGGGGGGG
GGGAGGGAGGGAAGGAGCTAGGTAGGGTCCATATAGGTGTGATGGAATGT
GCACCACAAGCACCAGAAACCTAACACTTATCTCACCCTTCCCTCTGTCT
CCTCTTCCCCCCCCCCTTTCTTCCGTCAGTTTGCGCACGTGGACGGCGAC
CACTTGACGCTCCTCAACGCCTATCACGCCTACAAACAGCAGGGGGGCAA
CAAGGACTGGTGCTGGGAAAATTTCATCAACGTCCGCTCCATGGGCAGCG
CCGAAAACGTGCGGAGCCAATTGGAAAGGTACGGTGATTTAATTTCATTA
GATGGGGTGCTTTGATTCTGTTTTGGTACATAGAAATGGTTATTAGGGGC
TCATTCCATTTTTTTCCCCAACCCATTTCTTGCTTCACTCCCCCCCTCCC
TGCCTCCCTCATTGTTTGGCTTTTGTTCGTCGTTCCTCTCACCTTGCCTT
CCCTTCCGACGTTCAGGATGCTGACCCGCATGGAGGTGCCCCTCGTTTCC
CCCGACTTTAACTCTCCAGATTATTATACCCGGATTAAAAAGGCCCTCAC
CGCTGGTAAGCCTCGAGAGAGGGAATTGGGAAAGGACGGAGGGTATAGGA
GGGAGGGAAGGGGGAAGGAAGGAAGGGGAAAAAGAGAGAGAGTAAGGGCG
TAGATATCCGGCTTACAATCCACTCATCGCTTCCCCCCTCTCTTCCTCCC
TCCCTCAGGCGGCTACATGCAGATCGCCCACTTACAGAGAACGGGGCAGT
ACCTAACTGTCAAGGACCACCAGATCGTTTCGATCCACCCATCGTCTGTG
TTGGACATGAAGCCTCCATGGGTGCTGTACGCGGACTTTGTCCTCACCAG
CAAGAATTATATTCGCACGATCACGGCGGTGGTAGGTAGAGGGAGGGACG
AGCAGCGGGGGAGGGAAGAAGGGAAGAAAGAGAGTGAAAGTGTTCGTCGT
ACCCAGCAGCACTCAACGTCCATGACCTTAACGCCTACCCTCCCTCCCTC
CCTCCCTCAGGAGTGCGACTGGCTCCTGGAGATCGCCCCTCATTACTACG
ACCTGGCCAATTTCCCCAAGGGCGAGACCAAGAATGAGCTCGAGGCGTGC
GCCAAGCGGCTCTATCAACTTTGAACTCATGGGAGGGAGGGACGGAGGGA
AGGAGGGGAGGAGGGAGGACGGATAGGTGACATACATGCCTGGGAGTGCG
CGCACGGATGCGCGTATGATATTGTGTGGCTGTGTGTTGGCCTTGTAGTA
ATAATGACGAGATGAACAAATTCAAAAAGGATACAACAGACGAAAGCGAG
AACGACGA

Coding sequence (CDS) from alignment at chr2:279377..284434-

>NO02G00870.1 ID=NO02G00870.1|Name=NO02G00870.1|organism=Nannochloropsis oceanica|type=CDS|length=2148bp|location=Sequence derived from alignment at chr2:279377..284434- (Nannochloropsis oceanica)
ATGAGCAAGCGTCCATTTGACAGTGGCGTGGGTATGGGTGGCGCGCGCAA
GCAACGTATTGATTTGTCGGACCTGAAGCCTGCTGGAGGTGGTAATGGTG
GTGGGATTGCAGGCCAAGGCACCGTAAATCCCTACACGAATAGGCAGTAT
AGCTCAAGATACTTTGATATCCTGTCGAAGCGACGGGGTTTGCCGGTGTA
CGAGTTTTTGGACGAGCTCTTGACCAAGGTGAAGAAGAACCAGGTGATCG
TCGTGGAAGGTGAAACCGGCTCTGGTAAGACAACCCAAATTCCCCAGTTC
CTGGTCGATGCCGGCTACACCCGCGATGGGCACTGTGTGGCCTGCACGCA
GCCTCGGCGAGTGGCAGCCATGAGCATCGCGAAGCGTGTGTCGGAGGAGA
TGGACGTGACACTCGGGGAGGAAGTAGGGTACACCATCCGATTTGAAGAC
TGCAGCAGTCAGAAGACGATTTTGAAATTTTTAACGGACGGGATGCTGTT
AAGGGAGGCCATGTTCGATCCGCACTTGGAGAAGTATAAGGTCATTGTGT
TGGACGAAGCCCACGAGCGTACCCTCGCAACTGATGTTCTGATGGGCCTG
CTCAAAGAGGTCCTGCAACGACGGCCGGACATGAAGATGGTGGTAATGTC
CGCCACCCTAGACGCGGAGAAGTTCCAGAAGTACTTTGGAGATGCCCCGT
TGCTGCGTGTGCCGGGGCGCATGTTTAAGGTGGAGGTGTTCTATACCCCC
GAGCCCGAGAGGGATTACGTCCAGGCCGCCATTAGGACGACACTGCAGAT
CCACCTCTGCGAGGAACCTGGTGACGTCCTAGTCTTCCTCACGGGTGAGG
AGGAGATCGAGGACGCCTGCCGCAAGATCCGAGACGAGAGTTTGAACTAC
ACCAGCACCCACGGAGAGCTGGCGGTGTTCCCCCTCTACTCCTCCCTCCC
TCCCATCCAACAGCAGAAAATTTTTTCCGACGCTCCCGGGCCGAAGGTAC
CCGGAGGACCGCCGGGGCGGAAGGTGGTGGTGTCGACAAATATCGCCGAA
ACGTCGTTGACGATTGATGGCATCGTCTATGTTGTGGACCCCGGTTTCTC
CAAGCAGAAGATTTACAACCCTCGCGTTCGCGTGGAGTCCCTCCTCGTCT
CTCCCATCTCCAAGGCCAGCGCGCAACAACGCAGCGGCCGTGCCGGTCGA
ACTCGTCCTGGGAAATGCTTCCGTCTCTACACCGAGAAGAGCTTCCAGAA
AGACTTGCAGGAACAAACATACCCGGAAATTCTGAGGAGTCAGATGAGCA
ATGTGGTGCTGACCCTCCTCAAGCTCGGGGTGGATGACCTCGTTCACTTC
GACTTTATGGACCCCCCGGCCCCCGAGACCTTGGCTCGGGCGTTGGAGGA
GCTGAATTACCTCGGGGCCATCTCGGACGAAGGACTCATTACGCAGATGG
GGCACAAGATGTCGGAGCTTCCCCTCGACCCCCAGGCGGCCAAGATGGTC
CTTAGCTCCCCCGACTACAACTGCTCCAACGAGATCCTTACCATCGTGTC
CATGCTGAGCGTTCCTCAGGTCTTCATGCGCCCCAAGGAAGCCGCCAAGC
GCGCCGACGAGGCCAAGGCACAGTTTGCGCACGTGGACGGCGACCACTTG
ACGCTCCTCAACGCCTATCACGCCTACAAACAGCAGGGGGGCAACAAGGA
CTGGTGCTGGGAAAATTTCATCAACGTCCGCTCCATGGGCAGCGCCGAAA
ACGTGCGGAGCCAATTGGAAAGGATGCTGACCCGCATGGAGGTGCCCCTC
GTTTCCCCCGACTTTAACTCTCCAGATTATTATACCCGGATTAAAAAGGC
CCTCACCGCTGGCGGCTACATGCAGATCGCCCACTTACAGAGAACGGGGC
AGTACCTAACTGTCAAGGACCACCAGATCGTTTCGATCCACCCATCGTCT
GTGTTGGACATGAAGCCTCCATGGGTGCTGTACGCGGACTTTGTCCTCAC
CAGCAAGAATTATATTCGCACGATCACGGCGGTGGAGTGCGACTGGCTCC
TGGAGATCGCCCCTCATTACTACGACCTGGCCAATTTCCCCAAGGGCGAG
ACCAAGAATGAGCTCGAGGCGTGCGCCAAGCGGCTCTATCAACTTTGA

Synonyms

Publications