NO02G00810.1, NO02G00810.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO02G00810.1
Unique NameNO02G00810.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1419
Alignment locationchr2:262120..263538 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:262120..263538 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO02G00810.1 vs.
Match: EWM30590.1 (guanine nucleotide-binding 3 [Nannochloropsis gaditana])

HSP 1 Score: 736.5 bits (1900), Expect = 5.200e-209
Identity = 391/477 (81.97%), Postives = 424/477 (88.89%), Query Frame = 0 
Query:    1 MTFKQKYKIERHVKEHKRKNKKETKRRAKLGLPPIGIGQRKNDTSIPNAWPFKEQLLEELATAKRNKEDEEIKKKEEAVLRRKQGGLIGKDVTDLVKQATAAQQSFSI----TDATKAASAPKERALGQQSRRAFIRDLKEVVEQADVVLEVLDARDPLGSRAEAVEELILRKPNKKLVLVLNKVDLVPKEVVSEWLAYLRRFHPTVAFKCATQEQKSQLSQHAGDASKASANVLSRSGSVGAEALMQLLKNYCRSLDIKTSISVGIVGYPNVGKSSVINSLKRTKAAGVSSTPGFTKCMQEVQLDKNIKLLDSPGIVFDDADVEGVLLRNCVNVDSLSDPPTAVAALLKRCDSQDLMMIYALPRFDPADVQGFLALLARKMGKLLRGGVPDRNSAARVLLRDWNTGKVPFYTKPPSLPSSSVEEEAQLVGTLGAAFNTGTVIEEGDAKLMAFLEEGGKEG---GNFVAFESGGVAG 471
            +TFKQKYKIER VKEHKRK KKET+RRAKLGLPP+GIGQRK + SIPNAWPFKEQLLEELATAKRNKE E+ KKKEEA LRRKQ GL+GKDV DLV QA AAQ +F+     T + +       +ALGQQSRRAFIRDLKEVVEQADVVLEVLDARDPLGSR E VEELILRKPNKKLVLVLNKVDLVP+EVV  WLAYLRRFHPTVAFK ATQEQ+ QL+QH GDASKA AN+LSRSGSVGAEAL+QLLKNY RSLDIKTSISVG+VGYPNVGKSS+INSLKRTKAAGVSSTPGFT+CMQEVQLDK+IKLLDSPGIVFDD+DVEGVLLRNCV VDSL DP  AV ALL+RC++QDLMMIYALP FD  DVQGFLALLARKMGKLLRGGVPDR +AARVLL+DWNTGKVPFYTKPP LPSS V+EEAQLVG+LG AF  G+V+EEGDAK+MA+LEEGG+ G   GNFVAFESGGVAG
Sbjct:   11 VTFKQKYKIERRVKEHKRKTKKETRRRAKLGLPPLGIGQRKKEVSIPNAWPFKEQLLEELATAKRNKEAEDAKKKEEAALRRKQKGLVGKDVADLVTQAAAAQATFASQGPGTLSLEENGVNDMKALGQQSRRAFIRDLKEVVEQADVVLEVLDARDPLGSRGEGVEELILRKPNKKLVLVLNKVDLVPREVVGAWLAYLRRFHPTVAFKSATQEQRVQLAQHGGDASKAGANLLSRSGSVGAEALLQLLKNYSRSLDIKTSISVGVVGYPNVGKSSLINSLKRTKAAGVSSTPGFTRCMQEVQLDKHIKLLDSPGIVFDDSDVEGVLLRNCVKVDSLPDPSAAVGALLQRCEAQDLMMIYALPAFDATDVQGFLALLARKMGKLLRGGVPDRTAAARVLLQDWNTGKVPFYTKPPPLPSSRVDEEAQLVGSLGTAFEVGSVLEEGDAKVMAYLEEGGEGGVGDGNFVAFESGGVAG 487
The following BLAST results are available for this feature:
BLAST of NO02G00810.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM30590.15.200e-20981.97guanine nucleotide-binding 3 [Nannochloropsis gadi... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G00810NO02G00810Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO02G00810.1NO02G00810.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO02G00810.1.cds1NO02G00810.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO02G00810.1 ID=NO02G00810.1|Name=NO02G00810.1|organism=Nannochloropsis oceanica|type=mRNA|length=1419bp
ATGACCTTCAAGCAAAAGTACAAGATCGAACGGCATGTCAAGGAGCACAA
ACGTAAAAATAAGAAGGAAACCAAGCGGCGTGCCAAGTTGGGCCTCCCTC
CTATCGGAATCGGGCAACGGAAAAATGACACAAGCATTCCCAACGCCTGG
CCCTTCAAGGAGCAACTCCTCGAGGAACTCGCCACCGCCAAGCGTAACAA
GGAAGACGAAGAAATCAAAAAGAAGGAGGAGGCAGTCCTACGTCGGAAGC
AGGGGGGGTTGATCGGAAAAGACGTGACGGACCTGGTAAAGCAAGCCACG
GCCGCCCAGCAATCTTTCTCAATTACCGACGCCACCAAGGCAGCGAGCGC
GCCCAAAGAACGCGCACTCGGCCAACAGAGTCGTCGGGCCTTCATCCGTG
ACCTAAAAGAGGTGGTTGAACAAGCAGACGTCGTCCTCGAAGTCCTCGAC
GCGCGTGACCCCCTCGGCTCTCGTGCTGAAGCCGTGGAGGAACTGATCCT
CCGGAAGCCCAACAAAAAACTCGTCCTGGTCCTCAACAAAGTCGACCTTG
TCCCCAAGGAGGTCGTCAGCGAATGGCTCGCATACCTCCGTCGCTTTCAC
CCGACCGTAGCCTTTAAATGCGCCACGCAGGAACAGAAATCCCAGCTGTC
TCAACACGCTGGCGATGCTTCCAAGGCATCTGCGAACGTCCTCTCCCGCA
GTGGCTCCGTGGGGGCGGAAGCCCTCATGCAACTGCTCAAGAACTATTGC
CGGTCCTTGGACATCAAGACCAGTATTAGCGTTGGGATTGTAGGGTACCC
TAACGTGGGGAAATCGTCGGTGATTAATTCGTTGAAGCGGACCAAGGCGG
CAGGTGTGTCGAGCACGCCGGGGTTCACCAAATGCATGCAGGAGGTGCAA
CTCGACAAGAACATCAAGCTTTTGGATTCTCCGGGTATTGTTTTCGATGA
CGCGGACGTGGAAGGGGTCCTGCTGCGCAATTGCGTGAATGTCGACTCCC
TCTCTGACCCTCCTACGGCCGTTGCGGCTCTCCTCAAGCGGTGTGACTCA
CAAGACCTGATGATGATATACGCCCTCCCTCGCTTTGACCCTGCAGATGT
CCAGGGATTCTTGGCATTGCTTGCCCGGAAGATGGGCAAATTGTTAAGGG
GGGGTGTGCCTGATCGCAATTCGGCAGCAAGAGTGTTGCTGCGGGATTGG
AACACGGGTAAGGTTCCTTTTTATACGAAACCACCTTCCCTACCTTCCTC
CTCGGTCGAAGAGGAGGCGCAGCTAGTGGGGACGCTGGGAGCTGCGTTTA
ATACCGGCACAGTGATTGAGGAGGGCGATGCCAAGCTTATGGCTTTCTTG
GAGGAGGGGGGGAAGGAGGGAGGAAATTTCGTGGCATTTGAGAGTGGCGG
TGTTGCGGGGGGGGGATGA
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protein sequence of NO02G00810.1

>NO02G00810.1-protein ID=NO02G00810.1-protein|Name=NO02G00810.1|organism=Nannochloropsis oceanica|type=polypeptide|length=473bp
MTFKQKYKIERHVKEHKRKNKKETKRRAKLGLPPIGIGQRKNDTSIPNAW
PFKEQLLEELATAKRNKEDEEIKKKEEAVLRRKQGGLIGKDVTDLVKQAT
AAQQSFSITDATKAASAPKERALGQQSRRAFIRDLKEVVEQADVVLEVLD
ARDPLGSRAEAVEELILRKPNKKLVLVLNKVDLVPKEVVSEWLAYLRRFH
PTVAFKCATQEQKSQLSQHAGDASKASANVLSRSGSVGAEALMQLLKNYC
RSLDIKTSISVGIVGYPNVGKSSVINSLKRTKAAGVSSTPGFTKCMQEVQ
LDKNIKLLDSPGIVFDDADVEGVLLRNCVNVDSLSDPPTAVAALLKRCDS
QDLMMIYALPRFDPADVQGFLALLARKMGKLLRGGVPDRNSAARVLLRDW
NTGKVPFYTKPPSLPSSSVEEEAQLVGTLGAAFNTGTVIEEGDAKLMAFL
EEGGKEGGNFVAFESGGVAGGG*
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mRNA from alignment at chr2:262120..263538-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO02G00810.1 ID=NO02G00810.1|Name=NO02G00810.1|organism=Nannochloropsis oceanica|type=mRNA|length=1419bp|location=Sequence derived from alignment at chr2:262120..263538- (Nannochloropsis oceanica)
ATGACCTTCAAGCAAAAGTACAAGATCGAACGGCATGTCAAGGAGCACAA
ACGTAAAAATAAGAAGGAAACCAAGCGGCGTGCCAAGTTGGGCCTCCCTC
CTATCGGAATCGGGCAACGGAAAAATGACACAAGCATTCCCAACGCCTGG
CCCTTCAAGGAGCAACTCCTCGAGGAACTCGCCACCGCCAAGCGTAACAA
GGAAGACGAAGAAATCAAAAAGAAGGAGGAGGCAGTCCTACGTCGGAAGC
AGGGGGGGTTGATCGGAAAAGACGTGACGGACCTGGTAAAGCAAGCCACG
GCCGCCCAGCAATCTTTCTCAATTACCGACGCCACCAAGGCAGCGAGCGC
GCCCAAAGAACGCGCACTCGGCCAACAGAGTCGTCGGGCCTTCATCCGTG
ACCTAAAAGAGGTGGTTGAACAAGCAGACGTCGTCCTCGAAGTCCTCGAC
GCGCGTGACCCCCTCGGCTCTCGTGCTGAAGCCGTGGAGGAACTGATCCT
CCGGAAGCCCAACAAAAAACTCGTCCTGGTCCTCAACAAAGTCGACCTTG
TCCCCAAGGAGGTCGTCAGCGAATGGCTCGCATACCTCCGTCGCTTTCAC
CCGACCGTAGCCTTTAAATGCGCCACGCAGGAACAGAAATCCCAGCTGTC
TCAACACGCTGGCGATGCTTCCAAGGCATCTGCGAACGTCCTCTCCCGCA
GTGGCTCCGTGGGGGCGGAAGCCCTCATGCAACTGCTCAAGAACTATTGC
CGGTCCTTGGACATCAAGACCAGTATTAGCGTTGGGATTGTAGGGTACCC
TAACGTGGGGAAATCGTCGGTGATTAATTCGTTGAAGCGGACCAAGGCGG
CAGGTGTGTCGAGCACGCCGGGGTTCACCAAATGCATGCAGGAGGTGCAA
CTCGACAAGAACATCAAGCTTTTGGATTCTCCGGGTATTGTTTTCGATGA
CGCGGACGTGGAAGGGGTCCTGCTGCGCAATTGCGTGAATGTCGACTCCC
TCTCTGACCCTCCTACGGCCGTTGCGGCTCTCCTCAAGCGGTGTGACTCA
CAAGACCTGATGATGATATACGCCCTCCCTCGCTTTGACCCTGCAGATGT
CCAGGGATTCTTGGCATTGCTTGCCCGGAAGATGGGCAAATTGTTAAGGG
GGGGTGTGCCTGATCGCAATTCGGCAGCAAGAGTGTTGCTGCGGGATTGG
AACACGGGTAAGGTTCCTTTTTATACGAAACCACCTTCCCTACCTTCCTC
CTCGGTCGAAGAGGAGGCGCAGCTAGTGGGGACGCTGGGAGCTGCGTTTA
ATACCGGCACAGTGATTGAGGAGGGCGATGCCAAGCTTATGGCTTTCTTG
GAGGAGGGGGGGAAGGAGGGAGGAAATTTCGTGGCATTTGAGAGTGGCGG
TGTTGCGGGGGGGGGATGA
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Coding sequence (CDS) from alignment at chr2:262120..263538-

>NO02G00810.1 ID=NO02G00810.1|Name=NO02G00810.1|organism=Nannochloropsis oceanica|type=CDS|length=1419bp|location=Sequence derived from alignment at chr2:262120..263538- (Nannochloropsis oceanica)
ATGACCTTCAAGCAAAAGTACAAGATCGAACGGCATGTCAAGGAGCACAA
ACGTAAAAATAAGAAGGAAACCAAGCGGCGTGCCAAGTTGGGCCTCCCTC
CTATCGGAATCGGGCAACGGAAAAATGACACAAGCATTCCCAACGCCTGG
CCCTTCAAGGAGCAACTCCTCGAGGAACTCGCCACCGCCAAGCGTAACAA
GGAAGACGAAGAAATCAAAAAGAAGGAGGAGGCAGTCCTACGTCGGAAGC
AGGGGGGGTTGATCGGAAAAGACGTGACGGACCTGGTAAAGCAAGCCACG
GCCGCCCAGCAATCTTTCTCAATTACCGACGCCACCAAGGCAGCGAGCGC
GCCCAAAGAACGCGCACTCGGCCAACAGAGTCGTCGGGCCTTCATCCGTG
ACCTAAAAGAGGTGGTTGAACAAGCAGACGTCGTCCTCGAAGTCCTCGAC
GCGCGTGACCCCCTCGGCTCTCGTGCTGAAGCCGTGGAGGAACTGATCCT
CCGGAAGCCCAACAAAAAACTCGTCCTGGTCCTCAACAAAGTCGACCTTG
TCCCCAAGGAGGTCGTCAGCGAATGGCTCGCATACCTCCGTCGCTTTCAC
CCGACCGTAGCCTTTAAATGCGCCACGCAGGAACAGAAATCCCAGCTGTC
TCAACACGCTGGCGATGCTTCCAAGGCATCTGCGAACGTCCTCTCCCGCA
GTGGCTCCGTGGGGGCGGAAGCCCTCATGCAACTGCTCAAGAACTATTGC
CGGTCCTTGGACATCAAGACCAGTATTAGCGTTGGGATTGTAGGGTACCC
TAACGTGGGGAAATCGTCGGTGATTAATTCGTTGAAGCGGACCAAGGCGG
CAGGTGTGTCGAGCACGCCGGGGTTCACCAAATGCATGCAGGAGGTGCAA
CTCGACAAGAACATCAAGCTTTTGGATTCTCCGGGTATTGTTTTCGATGA
CGCGGACGTGGAAGGGGTCCTGCTGCGCAATTGCGTGAATGTCGACTCCC
TCTCTGACCCTCCTACGGCCGTTGCGGCTCTCCTCAAGCGGTGTGACTCA
CAAGACCTGATGATGATATACGCCCTCCCTCGCTTTGACCCTGCAGATGT
CCAGGGATTCTTGGCATTGCTTGCCCGGAAGATGGGCAAATTGTTAAGGG
GGGGTGTGCCTGATCGCAATTCGGCAGCAAGAGTGTTGCTGCGGGATTGG
AACACGGGTAAGGTTCCTTTTTATACGAAACCACCTTCCCTACCTTCCTC
CTCGGTCGAAGAGGAGGCGCAGCTAGTGGGGACGCTGGGAGCTGCGTTTA
ATACCGGCACAGTGATTGAGGAGGGCGATGCCAAGCTTATGGCTTTCTTG
GAGGAGGGGGGGAAGGAGGGAGGAAATTTCGTGGCATTTGAGAGTGGCGG
TGTTGCGGGGGGGGGATGA
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Synonyms
Publications