NO02G00530.1, NO02G00530.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO02G00530.1
Unique Name	NO02G00530.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3475
Alignment location	chr2:181685..187050 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr2	genome	chr2:181685..187050 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO02G00530.1 vs.
Match: EJK46461.1 (hypothetical protein THAOC_34866 [Thalassiosira oceanica])

HSP 1 Score: 395.6 bits (1015), Expect = 4.000e-106
Identity = 228/552 (41.30%), Postives = 335/552 (60.69%), Query Frame = 0

Query:   90 WILVVFLVCLSGLFAGLTLGFMGLDKIGLEIVMEAGDSES-RRCARRIAPVRRDGNLLLCSLLFGNVAVNVLISILMSDLTSGLVGFFASTLLIVIFGDIIPQAFCSRYALEIGSRSVWLVRAIEFMLYPMAKPMAMLLDRLLGEDLGTLHTVNELSKLLDIHVKRGSVDPEAGSILTGALSYAHVKVSEVMTPIKDVFCLSSEARLDYKTCSHIYKSGFSRIPVYGKNRDDILGLILVKDLLLLDPQDATPVRNVLAMFGRKMEILWPDTDLPQALRLFKRGQAHMAVVRGVEGEEGPQDPYYTVQGIVTLEDVLEFIIGDEINDEADLRREGGRGGGSPDPTSGFDHGLLDELCGEPSLSAEGRGEREGGKEGGREEGGEETHVRFLRAVSDFGRLRLLDNTLRDERLGEDEVEGVGAYLLARVSPFKEMVEERGMEE---AQGMTRRVLESSPVLLLGGRE--GGREGEAAVVYMKGRVYTAMTVVLQGVLRVTAGREGFECERGPLSTLAAGAIQADYGQYISDFTA-TVASPSKAPVRCVQISRGVF 635
            +IL+V L+ LS LF+GLTLG M LD  GLEIVM   D  +  R A  I PVR +GNLLLC+LL GNV VN L+SIL++DLTSG+ GF  ST  IVIFG+IIPQA CSRY+L+IG ++V LV+    +LYP+ KPM+M+L++ LG ++GT ++ +E++KL+++HV+RG  + + G+ +TGAL Y +V VSEV TP+ + F L ++ RL + T + I+++G+SRIPVY  ++ +I+GL+ VKDL+ LDP+D  PV+N + +FGR + ++WPD  L   ++L K+G++HMA+VR V   EG  DP+Y ++GI+TLED++E I+GDEI DE DL  E        DP S  +   L     + SL     G   GG +          +   +RA     RLRLLD  L D+ L  +EV  V A+L    +   E++ ++ + +   A  +T      S      G E  G       ++Y +G      TVVL G + V +G + F  +      LA+ ++      Y+ DF+A  VA+P+    RCVQ+ R  +
Sbjct:  241 YILIVILLLLSALFSGLTLGLMSLDPSGLEIVMSNKDDPALARAAAAINPVRLNGNLLLCTLLLGNVGVNSLLSILLADLTSGMTGFLVSTFAIVIFGEIIPQALCSRYSLQIGEKTVPLVKIFMVLLYPLCKPMSMVLNKALGHEIGTTYSASEMAKLIEMHVQRGQFEADTGTAMTGALRYRNVAVSEVFTPLVNTFMLGADERLGFDTVAKIFRTGYSRIPVYEVSKSNIIGLLFVKDLIFLDPEDEIPVKNFVQIFGRGLHVVWPDDKLGDVMKLLKKGRSHMALVRDVNDGEGKMDPFYEIKGIITLEDIVEVILGDEIVDETDLLVEVN------DPESKVERSDLGVYI-DGSLETNSNGIMIGGTD----------NTGAIRAPDWESRLRLLDERLVDDHLSAEEVRAVAAHLKTNYANAMELISDKQLRDLLAALPVTNLCPAGSCATDDTGDEDCGVPTNHDELLYERGVAADFCTVVLSGKIVVLSGADKFRSDVSNWGVLASRSLTD--SSYVPDFSAWVVAAPNSGGCRCVQLGRAAY 773

The following BLAST results are available for this feature:

BLAST of NO02G00530.1 vs.

BLAST of NO02G00530.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EJK46461.1	4.000e-106	41.30	hypothetical protein THAOC_34866 [Thalassiosira oc...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO02G00530	NO02G00530	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO02G00530.1	NO02G00530.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO02G00530.1.cds1	NO02G00530.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00530.1.cds2	NO02G00530.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00530.1.cds3	NO02G00530.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00530.1.cds4	NO02G00530.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00530.1.cds5	NO02G00530.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00530.1.cds6	NO02G00530.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00530.1.cds7	NO02G00530.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00530.1.cds8	NO02G00530.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00530.1.cds9	NO02G00530.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00530.1.cds10	NO02G00530.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00530.1.cds11	NO02G00530.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00530.1.cds12	NO02G00530.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr2:181685..187050+
coding sequence from alignment at chr2:181685..187050+

mRNA sequence

>NO02G00530.1 ID=NO02G00530.1|Name=NO02G00530.1|organism=Nannochloropsis oceanica|type=mRNA|length=3475bp
CCGTCTTAGAAAGTGATTCTACTTTGCAATTAAGAAAACGGAAGGATGTT
ATTTTCTCCTAGACGCACGTCCATGTGGTCACACACAAAATGTACAAGTG
TGCCTCCAATTAGGCCATGCAGGTGAGCGGACCATTAGAGCGTGAGCAGT
GAGCCACGACATACTGCGATATGCCCGAGTTGAGGGCATTTTGAGTACTT
TCTAAGGTGGCTTCAATTTGTCCGGTAACTTTTGTGAGACATCACAGCGA
AAAGCTGCCAATACATAATTACAAGCCACTTGTCGAGTCATAGCGAGACA
TAATCATTTGGACATGGTTGGAGTGACAAACAAGGACGGATTTTAGAGCG
CTTGGAGGGGCAGAAAGAAGGAGGATGAGGATGTTGTCGTGAGAGAGATG
GCAAGAGGCCAGAGAAAACCAAAACTATGCGCCATAGAAACATCTATCGG
CCCCTCAACTAAGATTCGCCAGCACTGCGTGGGTGGCATTCCAGGTCTTG
ACTCTTGTGTGTGAAATAATGGTCGCCTACGTCGAATTTTGACCAATGGG
CCAACCCCCGCGACGACACACGCCAGGGGGAGCAGAGAGGAGGTCCTGCC
CCAGGAGTGCGAGGCAGTGCATGAGACTGCCTCCGCTTCATGGCCCACCA
CGATGCTTATGTCAAGATCTTATTTTCCTCAACCACAGGCTTTGGTCGTT
GTAACGAGCTGCTCTCTCATACGAATTATTTATCCCGGCGGCCCGACTCG
TCCGTCCGGGGGAAGTACAAGAAGTAAAACCTGGTTGAGTAAAACCGGAA
ACTGACATGGCTGCCAAATAAAGAGGGGGTTGGCAAGCACAACCACGAAC
CACTGATTTGGGCAGTACAACAAATAAAGCATATACAGTATGGTAGGGGA
GGCACCAGGGCCAGGTCGGGGCACTTTGAGAAGACGAGGGAGGAGAAGTG
GCAGCAGCAGCAGGAGCAGCAGCGGTAAACACGTTAAAAATGTCCATCAC
ACGATCACCACCCTGCTCCACGGAACTATATCATGGAAAGGAACGGCCTC
TTCACTTTTGATCAGCCTTTTCTTGTATTGCAAGCCGGCCAGTGGCGCGG
AAGGTGACGGCCTGGCCGCTGATCTGCCTGATACAACGCTTGCCAAGGTC
CTCCTATGGATCCTCGTCGTCTTTTTGGTCTGCTTGAGCGGCCTTTTCGC
TGGCCTGACACTCGGCTTCATGGGACTGGACAAAATCGGCCTGGAGATCG
TCATGGAAGCCGGCGACTCCGAATCGCGGCGTTGCGCCCGACGGATCGCC
CCTGTCCGTCGAGATGGGAACCTCCTGTTGTGCTCGTTGCTCTTCGGGAA
CGTGGCTGTCAATGTCTTGATTTCGATCCTCATGTCGGACTTGACGAGCG
GGCTGGTCGGTTTCTTTGCATCCACGCTCCTCATTGTCATATTTGGTGAC
ATCATCCCGCAAGCCTTCTGCTCCCGGTACGCCCTGGAAATTGGCTCCAG
GAGCGTCTGGCTCGTTCGCGCCATCGAATTCATGCTCTACCCCATGGCCA
AGCCCATGGCCATGCTCCTTGACCGGCTGCTGGGGGAGGATCTTGGGACC
CTCCACACCGTCAACGAGCTCTCGAAGCTCCTAGATATCCACGTCAAGCG
CGGATCTGTGGACCCGGAGGCAGGCTCCATTCTCACGGGGGCTTTGTCTT
ATGCGCATGTGAAAGTGTCGGAGGTCATGACGCCCATCAAGGACGTGTTC
TGCCTCTCCTCCGAGGCCCGCCTCGACTACAAGACCTGCTCCCACATCTA
CAAATCCGGATTCTCGCGAATTCCCGTCTACGGAAAGAACCGAGACGACA
TCCTCGGCCTCATCCTTGTCAAGGACCTCCTCCTCCTCGATCCCCAAGAC
GCCACGCCTGTCCGTAACGTCCTGGCTATGTTTGGGCGGAAAATGGAAAT
CCTCTGGCCGGACACGGACTTGCCCCAGGCGCTCCGTCTGTTCAAGCGCG
GACAAGCGCATATGGCCGTGGTACGAGGGGTGGAAGGGGAGGAAGGGCCT
CAGGACCCTTATTACACCGTGCAGGGAATTGTGACGCTGGAGGACGTACT
GGAGTTTATCATAGGGGACGAAATCAATGATGAGGCGGACCTGAGGAGGG
AGGGAGGGCGGGGGGGAGGAAGCCCGGACCCTACCAGTGGGTTTGATCAT
GGGCTACTCGACGAACTGTGTGGAGAGCCCTCTTTGAGTGCAGAGGGGAG
GGGAGAGAGGGAAGGAGGAAAGGAGGGAGGGAGGGAGGAAGGGGGGGAAG
AGACGCACGTGAGATTTCTTCGGGCGGTGTCAGACTTCGGGAGATTACGG
CTGCTGGATAATACGTTGAGGGATGAGAGACTGGGGGAGGACGAGGTGGA
GGGAGTGGGGGCATACCTGCTGGCCCGAGTCTCGCCGTTTAAGGAGATGG
TGGAGGAGAGGGGCATGGAGGAGGCGCAAGGGATGACGCGGAGGGTGCTG
GAGTCGAGTCCGGTGCTGCTGTTGGGGGGGAGGGAGGGAGGGAGGGAGGG
AGAGGCGGCGGTGGTGTACATGAAGGGAAGGGTCTACACGGCCATGACGG
TAGTGCTGCAGGGTGTGCTAAGGGTGACGGCGGGGAGGGAGGGATTTGAA
TGCGAGCGGGGGCCCTTGTCGACGCTGGCGGCGGGGGCGATTCAGGCGGA
CTATGGACAGTACATCTCTGACTTCACAGCCACGGTGGCCAGCCCCAGCA
AGGCGCCCGTGCGGTGCGTGCAGATCAGTCGAGGGGTCTTCCGGCGATAT
TTTTATCCACAGGCCGAGGCGGACGACTTCGAGGTTTATCTGCACCGATT
AAAAGAGCGCGAAGGGAAAAAACGCGCCAAGGCCCTGGCACTGCAGGTAC
TGCAGCAGCACGCACAGGCCCGACAGCAGCAGCCGCAGCCGCAGCCGCCG
CCACACCTGCATGACAATGGGAGAGGGCGGGAGGGAGGAAGCGGAGGAGG
AAGCGGGCCAGGGGAGGTCGTGGGTGCCCTCGGGGGAAAGAAGAGCAGCA
GCAGCAGTAGCAGCAGCAGTAGCAGCAGTAACAGCAGCAGCAGCGGCAGC
AGTAAAAGCAGCAGCAGTAACAGCAGCAGCAGCAGTAACAGCAGCAGCAG
TAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGTAACGGCAGCAGCAGCA
GCAGCAGGAACAAGAGGGCCGTAACGAATCTAACTAGAGGGTATGAAACG
GACGACAAGGAGGGGGAGGAGGAGGAGGAGAGGAGAAGAAGTAGTAGGAG
AAGGGAGAAGAGAACGGAGGAGAATGGGGGGAGAGACTTTTGTTTGGGTC
CTAGTGAGTTGTGTGGGGGGGGACTTGACCCCGGCGAGTGGAGAAGGGAG
AGGGAAAGGAGGAGGGAGAGGAGGAGGAGGTGGAGGAGGAGGAAGGAAAA
CAGGAGGAGGGGGAGGAGGTCCTAG

protein sequence of NO02G00530.1

>NO02G00530.1-protein ID=NO02G00530.1-protein|Name=NO02G00530.1|organism=Nannochloropsis oceanica|type=polypeptide|length=862bp
MVGEAPGPGRGTLRRRGRRSGSSSRSSSGKHVKNVHHTITTLLHGTISWK
GTASSLLISLFLYCKPASGAEGDGLAADLPDTTLAKVLLWILVVFLVCLS
GLFAGLTLGFMGLDKIGLEIVMEAGDSESRRCARRIAPVRRDGNLLLCSL
LFGNVAVNVLISILMSDLTSGLVGFFASTLLIVIFGDIIPQAFCSRYALE
IGSRSVWLVRAIEFMLYPMAKPMAMLLDRLLGEDLGTLHTVNELSKLLDI
HVKRGSVDPEAGSILTGALSYAHVKVSEVMTPIKDVFCLSSEARLDYKTC
SHIYKSGFSRIPVYGKNRDDILGLILVKDLLLLDPQDATPVRNVLAMFGR
KMEILWPDTDLPQALRLFKRGQAHMAVVRGVEGEEGPQDPYYTVQGIVTL
EDVLEFIIGDEINDEADLRREGGRGGGSPDPTSGFDHGLLDELCGEPSLS
AEGRGEREGGKEGGREEGGEETHVRFLRAVSDFGRLRLLDNTLRDERLGE
DEVEGVGAYLLARVSPFKEMVEERGMEEAQGMTRRVLESSPVLLLGGREG
GREGEAAVVYMKGRVYTAMTVVLQGVLRVTAGREGFECERGPLSTLAAGA
IQADYGQYISDFTATVASPSKAPVRCVQISRGVFRRYFYPQAEADDFEVY
LHRLKEREGKKRAKALALQVLQQHAQARQQQPQPQPPPHLHDNGRGREGG
SGGGSGPGEVVGALGGKKSSSSSSSSSSSSNSSSSGSSKSSSSNSSSSSN
SSSSSSSSSSSSSSSNGSSSSSRNKRAVTNLTRGYETDDKEGEEEEERRR
SSRRREKRTEENGGRDFCLGPSELCGGGLDPGEWRRERERRRERRRRWRR
RKENRRRGRRS*

mRNA from alignment at chr2:181685..187050+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO02G00530.1 ID=NO02G00530.1|Name=NO02G00530.1|organism=Nannochloropsis oceanica|type=mRNA|length=5366bp|location=Sequence derived from alignment at chr2:181685..187050+ (Nannochloropsis oceanica)
CCGTCTTAGAAAGTGATTCTACTTTGCAATTAAGAAAACGGAAGGATGTT
ATTTTCTCCTAGACGCACGTCCATGTGGTCACACACAAAATGTACAAGTG
TGCCTCCAATTAGGCCATGCAGGTGAGCGGACCATTAGAGCGTGAGCAGT
GAGCCACGACATACTGCGATATGCCCGAGTTGAGGGCATTTTGAGTACTT
TCTAAGGTGGCTTCAATTTGTCCGGTAACTTTTGTGAGACATCACAGCGA
AAAGCTGCCAATACATAATTACAAGCCACTTGTCGAGTCATAGCGAGACA
TAATCATTTGGACATGGTTGGAGTGACAAACAAGGACGGATTTTAGAGCG
CTTGGAGGGGCAGAAAGAAGGAGGATGAGGATGTTGTCGTGAGAGAGATG
GCAAGAGGCCAGAGAAAACCAAAACTATGCGCCATAGAAACATCTATCGG
CCCCTCAACTAAGATTCGCCAGCACTGCGTGGGTGGCATTCCAGGTCTTG
ACTCTTGTGTGTGAAATAATGGTCGCCTACGTCGAATTTTGACCAATGGG
CCAACCCCCGCGACGACACACGCCAGGGGGAGCAGAGAGGAGGTCCTGCC
CCAGGAGTGCGAGGCAGTGCATGAGACTGCCTCCGCTTCATGGCCCACCA
CGATGCTTATGTCAAGATCTTATTTTCCTCAACCACAGGCTTTGGTCGTT
GTAACGAGCTGCTCTCTCATACGAATTATTTATCCCGGCGGCCCGACTCG
TCCGTCCGGGGGAAGTACAAGAAGTAAAACCTGGTTGAGTAAAACCGGAA
ACTGACATGGCTGCCAAATAAAGAGGGGGTTGGCAAGCACAACCACGAAC
CACTGATTTGGGCAGTACAACAAATAAAGCATATACAGTATGGTAGGGGA
GGCACCAGGGCCAGGTCGGGGCACTTTGAGAAGACGAGGGAGGAGAAGTG
GCAGCAGCAGCAGGAGCAGCAGCGGTAAACACGTTAAAAATGTCCATCAC
ACGATCACCACCCTGCTCCACGGAACTATATCATGGAAAGGAACGGCCTC
TTCACTTTTGATCAGCCTTTTCTTGTATTGCAAGCCGGCCAGTGGCGCGG
AAGGTGACGGCCTGGCCGCTGATCTGCCTGATACAACGCTTGCCAAGGTC
CTCCTATGGATCCTCGTCGTCTTTTTGGTCTGCTTGAGCGGTACGTGTAT
TGGTCGTGGGGTGCTTGTATGAAGTAATGTGTACAAGACGTATATCTGCC
AAGGAACCAAGGAACTGCTTTTCCCCCCTTTTCCCGGCGCTCACCCGATC
CTCCCTCCCTCCTCCTCTCCTCCCTCCTTTGTCCCCATCCACCTAGGCCT
TTTCGCTGGCCTGACACTCGGCTTCATGGGACTGGACAAAATCGGCCTGG
AGATCGTCATGGAAGCCGGCGACTCCGAATCGCGGCGTTGCGCCCGACGG
ATCGCCCCTGTCCGTCGAGATGGGAACCTCCTGTTGTGCTCGTTGCTCTT
CGGGAACGTGGCTGTCAATGTCTTGATTTCGATCCTCATGTCGGGTGAGG
ATGATGGGGAGGGAAGGAGGGAGGAAAGGAGGGAAGGAAGGAAGGGGGGA
GGGAGGGAGGGAGGGAGGGATGGATGGAGTGGGGTTGGGTCGGTACGAGT
GCTTGGACGGAGGAGGGATAAAAGGGAGGACTTGTTTATCTCCTCCTCCT
CTTCAGTCGTACCTGTCACAAACCACCCTCTTCCTTCCCTTCCCTTCCTT
TTACACGCCCTCCTCCTCTCTTCATTCGTACTCTTGACACATCACTCTCT
TCCTCGCATTCCTTTCCCCCTAATTTTAGACTTGACGAGCGGGCTGGTCG
GTTTCTTTGCATCCACGCTCCTCATTGTCATATTTGGTGACATCATCCCG
CAAGGTACGCCTCACTCCCCCGCTCCCTCCCCTCCTCCTCCATTCCTCCA
TACCCCACCTCCTCCCTTCTTTTCCTTCTTGCGCTCTAGGTTCATCACCC
CAGCCGTCGCTGACTACTATGTAACAAACAGAAAGAAACGTGATTTTTAT
ACCTACAGACGTCTCTCCCTCCACAGTGCCCTCCTCTCTTTTTCTTAATT
CACTCCTTCCATCCCTCCCCCCCCCCAGCCTTCTGCTCCCGGTACGCCCT
GGAAATTGGCTCCAGGAGCGTCTGGCTCGTTCGCGCCATCGAATTCATGC
TCTACCCCATGGCCAAGCCCATGGCCATGCTCCTTGACCGGCTGCTGGGG
GAGGATCTTGGGACCCTCCACACCGTCAACGAGCTCTCGAAGCTCCTAGA
TATCCACGTCAAGCGCGGATCTGTGGACCCGGAGGCAGGCTCCATTCTCA
CGGGGGCTTTGTCTTATGCGCATGTGAAAGTGTCGGAGGTCATGACGCCC
ATCAAGGTGAGAGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGCGGATGG
CAACGTCTCGACTCCCTCTTTCCCTCCCTCCCTCCCCCCCTTCCTGCAGG
ACGTGTTCTGCCTCTCCTCCGAGGCCCGCCTCGACTACAAGACCTGCTCC
CACATCTACAAATCCGGATTCTCGCGAATTCCCGTCTACGGTGCGTCTCG
TCCCTTCCCTGCTCCCTCCCTTCCTCCCTCTATCCGAAGATCTGTAATCC
TTCCTCCCTCCCTCCCTCCCTCCCTCCTTCGCCATTCACAGGAAAGAACC
GAGACGACATCCTCGGCCTCATCCTTGTCAAGGACCTCCGTACGCCCTCC
CTCCCTCCCTCCCTCCCCCCCTCCCTCCCTATTTTCAAATCATTCTCTCA
TTCTTTCACTCTCCCTCCCTCCCTCCCTCCCTCCTTCACAGTCCTCCTCG
ATCCCCAAGACGCCACGCCTGTCCGTAACGTCCTGGCTATGTTTGGGCGG
AAAATGGAAATCCTCTGGCCGGACACGGACTTGCCCCAGGTAGCGAGGGA
GGGAGGGAGGGAGGGAGGGAGGGAGGGGGGAGGGAGGGGTTGGAGGAGAT
AATGTTGGCAAGGCCAGTCGGCGCGATGTTTTCGTTGTTGTTGAGAAAGA
CGTCTCACCGACCACTCCCTCCCTCCCTTCCTCCCGCCCTCCCTCCCTCT
CTCCTTTTCATACCCACCAGGCGCTCCGTCTGTTCAAGCGCGGACAAGCG
CATATGGCCGTGGTACGAGGGGTGGAAGGGGAGGAAGGGCCTCAGGACCC
TTATTACACCGTGCAGGGAATTGTGACGCTGGAGGACGTACTGGAGTTTA
TCATAGGTACCGAGGGAGGGCGGGAGGGAGGGAAAAGTGGAGGGAGATTG
GACAGAGGGAACCCTCTCCTCCCTCCCTTTATTACTACCCCTGGGTGCCC
CTGCATTTCTCCGACACCACACGGTCCCCCTCCCTCCCTCCCTCCCTCCC
TCCCTCCCTGCCTGCCTCTTTCACTTCTTTTCAATGTCTCTCCCCTCTCT
CGTACACAGGGGACGAAATCAATGATGAGGCGGACCTGAGGAGGGAGGGA
GGGCGGGGGGGAGGAAGCCCGGACCCTACCAGTGGGTTTGATCATGGGCT
ACTCGACGAACTGTGTGGAGAGCCCTCTTTGAGTGCAGAGGGGAGGGGAG
AGAGGGAAGGAGGAAAGGAGGGAGGGAGGGAGGAAGGGGGGGAAGAGACG
CACGTGAGATTTCTTCGGGCGGTGTCAGACTTCGGGAGATTACGGCTGCT
GGATAATACGTTGAGGGATGAGAGACTGGGGGAGGACGAGGTGGAGGGAG
TGGGGGCATACCTGCTGGCCCGAGTCTCGCCGTTTAAGGAGATGGTGGAG
GAGAGGGGCATGGAGGAGGCGCAAGGGATGACGCGGAGGGTGCTGGAGTC
GAGTCCGGTGCTGCTGTTGGGGGGGAGGGAGGGAGGGAGGGAGGGAGAGG
CGGCGGTGGTGTACATGAAGGGAAGGGTCTACACGGCCATGACGGTAGTG
CTGCAGGGTGTGCTAAGGGTGACGGCGGGGAGGGAGGGATTTGAATGCGA
GCGGGGGCCCTTGTCGACGCTGGCGGCGGGGGCGATTCAGGTAGGCTTGG
GAGGGAGGGAGGATGAGGAGGAGAGAGGAGGGCTTAGGTGGAGGGAGGGA
GAGAGGGAGGGGTCGAGTTCTTGTATGCCTCCCCTCTCTCTGTCGGTCGG
TCGGTCGCAAATCAGTCAACTCCGCTGACTGCTCTTTGCACCATTTCCTC
CCTCACCCCTCCGTCCCTCCCTCCCTCCTATCACTCCAGGCGGACTATGG
ACAGTACATCTCTGACTTCACAGCCACGGTGGCCAGCCCCAGCAAGGCGC
CCGTGCGGTGCGTGCAGATCAGTCGAGGGGTCTTCCGGCGATATTTTTAT
CCACAGGCCGAGGCGGTGAGTCTCCGGTCTGAGTGATTATCTCCCCCCTT
TTCCATATTCCTATGTCTAGTCCAGTCCTCTTTTGCTTACTTCCCTCCCT
CCCCTTCATCCGCAAGCCGCGGTGATGAGCCCCGATTTGGATTATGACCC
CTCCCCTTTTACCCCTCTTTCTCTCTTTCTCTCTTCTTCCTCCTGTGTCT
GGACTTGCCTTTTGCCCATGCTGTGATGGCGGGAATACAAGGAGGGTGAA
AGAGTGACCTATCCCTCCCTCCCTTCCTCTCTCCCCACGCAGGACGACTT
CGAGGTTTATCTGCACCGATTAAAAGAGCGCGAAGGGAAAAAACGCGCCA
AGGCCCTGGCACTGCAGGTACTGCAGCAGCACGCACAGGCCCGACAGCAG
CAGCCGCAGCCGCAGCCGCCGCCACACCTGCATGACAATGGGAGAGGGCG
GGAGGGAGGAAGCGGAGGAGGAAGCGGGCCAGGGGAGGTCGTGGGTGCCC
TCGGTTGGCCTGTGGGCCACTCCCATACAAGTGCAGTCTCTTCTCCCAAC
GTCACCATCATGATGCAATCAAGGGGGAAAGAAGAGCAGCAGCAGCAGTA
GCAGCAGCAGTAGCAGCAGTAACAGCAGCAGCAGCGGCAGCAGTAAAAGC
AGCAGCAGTAACAGCAGCAGCAGCAGTAACAGCAGCAGCAGTAGCAGCAG
CAGCAGTAGCAGCAGCAGCAGCAGTAACGGCAGCAGCAGCAGCAGCAGGA
ACAAGAGGGCCGTAACGAATCTAACTAGAGGGTATGAAACGGACGACAAG
GAGGGGGAGGAGGAGGAGGAGAGGAGAAGAAGTAGTAGGAGAAGGGAGAA
GAGAACGGAGGAGAATGGGGGGAGAGACTTTTGTTTGGGTCCTAGTGAGT
TGTGTGGGGGGGGACTTGACCCCGGCGAGTGGAGAAGGGAGAGGGAAAGG
AGGAGGGAGAGGAGGAGGAGGTGGAGGAGGAGGAAGGAAAACAGGAGGAG
GGGGAGGAGGTCCTAG

Coding sequence (CDS) from alignment at chr2:181685..187050+

>NO02G00530.1 ID=NO02G00530.1|Name=NO02G00530.1|organism=Nannochloropsis oceanica|type=CDS|length=2586bp|location=Sequence derived from alignment at chr2:181685..187050+ (Nannochloropsis oceanica)
ATGGTAGGGGAGGCACCAGGGCCAGGTCGGGGCACTTTGAGAAGACGAGG
GAGGAGAAGTGGCAGCAGCAGCAGGAGCAGCAGCGGTAAACACGTTAAAA
ATGTCCATCACACGATCACCACCCTGCTCCACGGAACTATATCATGGAAA
GGAACGGCCTCTTCACTTTTGATCAGCCTTTTCTTGTATTGCAAGCCGGC
CAGTGGCGCGGAAGGTGACGGCCTGGCCGCTGATCTGCCTGATACAACGC
TTGCCAAGGTCCTCCTATGGATCCTCGTCGTCTTTTTGGTCTGCTTGAGC
GGCCTTTTCGCTGGCCTGACACTCGGCTTCATGGGACTGGACAAAATCGG
CCTGGAGATCGTCATGGAAGCCGGCGACTCCGAATCGCGGCGTTGCGCCC
GACGGATCGCCCCTGTCCGTCGAGATGGGAACCTCCTGTTGTGCTCGTTG
CTCTTCGGGAACGTGGCTGTCAATGTCTTGATTTCGATCCTCATGTCGGA
CTTGACGAGCGGGCTGGTCGGTTTCTTTGCATCCACGCTCCTCATTGTCA
TATTTGGTGACATCATCCCGCAAGCCTTCTGCTCCCGGTACGCCCTGGAA
ATTGGCTCCAGGAGCGTCTGGCTCGTTCGCGCCATCGAATTCATGCTCTA
CCCCATGGCCAAGCCCATGGCCATGCTCCTTGACCGGCTGCTGGGGGAGG
ATCTTGGGACCCTCCACACCGTCAACGAGCTCTCGAAGCTCCTAGATATC
CACGTCAAGCGCGGATCTGTGGACCCGGAGGCAGGCTCCATTCTCACGGG
GGCTTTGTCTTATGCGCATGTGAAAGTGTCGGAGGTCATGACGCCCATCA
AGGACGTGTTCTGCCTCTCCTCCGAGGCCCGCCTCGACTACAAGACCTGC
TCCCACATCTACAAATCCGGATTCTCGCGAATTCCCGTCTACGGAAAGAA
CCGAGACGACATCCTCGGCCTCATCCTTGTCAAGGACCTCCTCCTCCTCG
ATCCCCAAGACGCCACGCCTGTCCGTAACGTCCTGGCTATGTTTGGGCGG
AAAATGGAAATCCTCTGGCCGGACACGGACTTGCCCCAGGCGCTCCGTCT
GTTCAAGCGCGGACAAGCGCATATGGCCGTGGTACGAGGGGTGGAAGGGG
AGGAAGGGCCTCAGGACCCTTATTACACCGTGCAGGGAATTGTGACGCTG
GAGGACGTACTGGAGTTTATCATAGGGGACGAAATCAATGATGAGGCGGA
CCTGAGGAGGGAGGGAGGGCGGGGGGGAGGAAGCCCGGACCCTACCAGTG
GGTTTGATCATGGGCTACTCGACGAACTGTGTGGAGAGCCCTCTTTGAGT
GCAGAGGGGAGGGGAGAGAGGGAAGGAGGAAAGGAGGGAGGGAGGGAGGA
AGGGGGGGAAGAGACGCACGTGAGATTTCTTCGGGCGGTGTCAGACTTCG
GGAGATTACGGCTGCTGGATAATACGTTGAGGGATGAGAGACTGGGGGAG
GACGAGGTGGAGGGAGTGGGGGCATACCTGCTGGCCCGAGTCTCGCCGTT
TAAGGAGATGGTGGAGGAGAGGGGCATGGAGGAGGCGCAAGGGATGACGC
GGAGGGTGCTGGAGTCGAGTCCGGTGCTGCTGTTGGGGGGGAGGGAGGGA
GGGAGGGAGGGAGAGGCGGCGGTGGTGTACATGAAGGGAAGGGTCTACAC
GGCCATGACGGTAGTGCTGCAGGGTGTGCTAAGGGTGACGGCGGGGAGGG
AGGGATTTGAATGCGAGCGGGGGCCCTTGTCGACGCTGGCGGCGGGGGCG
ATTCAGGCGGACTATGGACAGTACATCTCTGACTTCACAGCCACGGTGGC
CAGCCCCAGCAAGGCGCCCGTGCGGTGCGTGCAGATCAGTCGAGGGGTCT
TCCGGCGATATTTTTATCCACAGGCCGAGGCGGACGACTTCGAGGTTTAT
CTGCACCGATTAAAAGAGCGCGAAGGGAAAAAACGCGCCAAGGCCCTGGC
ACTGCAGGTACTGCAGCAGCACGCACAGGCCCGACAGCAGCAGCCGCAGC
CGCAGCCGCCGCCACACCTGCATGACAATGGGAGAGGGCGGGAGGGAGGA
AGCGGAGGAGGAAGCGGGCCAGGGGAGGTCGTGGGTGCCCTCGGGGGAAA
GAAGAGCAGCAGCAGCAGTAGCAGCAGCAGTAGCAGCAGTAACAGCAGCA
GCAGCGGCAGCAGTAAAAGCAGCAGCAGTAACAGCAGCAGCAGCAGTAAC
AGCAGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCAGCAGTAACGG
CAGCAGCAGCAGCAGCAGGAACAAGAGGGCCGTAACGAATCTAACTAGAG
GGTATGAAACGGACGACAAGGAGGGGGAGGAGGAGGAGGAGAGGAGAAGA
AGTAGTAGGAGAAGGGAGAAGAGAACGGAGGAGAATGGGGGGAGAGACTT
TTGTTTGGGTCCTAGTGAGTTGTGTGGGGGGGGACTTGACCCCGGCGAGT
GGAGAAGGGAGAGGGAAAGGAGGAGGGAGAGGAGGAGGAGGTGGAGGAGG
AGGAAGGAAAACAGGAGGAGGGGGAGGAGGTCCTAG

Synonyms

Publications