NO02G00500.1, NO02G00500.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO02G00500.1
Unique Name	NO02G00500.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3965
Alignment location	chr2:168970..174460 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr2	genome	chr2:168970..174460 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO02G00500.1 vs.
Match: EWM30616.1 (polyadenylate-binding protein [Nannochloropsis gaditana])

HSP 1 Score: 484.2 bits (1245), Expect = 7.500e-133
Identity = 244/255 (95.69%), Postives = 248/255 (97.25%), Query Frame = 0

Query:    1 MDAATANASAGMNGGGANMPPQGAAAGGGAGSGAPMYGNVRSASLYVGDLAPSTTESQLFEAFSQIGKIQSIRILRDAITRQSLGYAYVNFYDTMDAERAIDVLNFQPINGRPCRVMWVQRDPYLRKTGVGNIVIKNLHSTIDNKTLFDTFSVFGNILSCKVVTDEHGNSRGFGFVHFDSEASAQGCISDVNGKIIGGQEVVVEPFKRGHKVEALWTNLYVKNVPLDWDDARFKAEFEKYGEITSAVLRKVDESE 256
            MDAATANA+ GMNGG ANMP QGAA G GAGSGAPMYGNVRSASLYVGDLAPSTTESQLFEAFSQIGKIQSIRILRDAITRQSLGYAYVN+YDTMDAERAIDVLNFQPINGRPCRVMWVQRDPYLRKTGVGNIVIKNLH TIDNKTLFDTFSVFGNILSCKVVTDEHG SRGFGFVHFDSEASAQGCI+DVNGKIIGGQEVVVEPFKRGHKVEALWTNLYVKNVPLDWDDARFK+EFEKYGEITSAVLRKVDESE
Sbjct:    1 MDAATANANTGMNGG-ANMPAQGAATGTGAGSGAPMYGNVRSASLYVGDLAPSTTESQLFEAFSQIGKIQSIRILRDAITRQSLGYAYVNYYDTMDAERAIDVLNFQPINGRPCRVMWVQRDPYLRKTGVGNIVIKNLHPTIDNKTLFDTFSVFGNILSCKVVTDEHGQSRGFGFVHFDSEASAQGCIADVNGKIIGGQEVVVEPFKRGHKVEALWTNLYVKNVPLDWDDARFKSEFEKYGEITSAVLRKVDESE 254

The following BLAST results are available for this feature:

BLAST of NO02G00500.1 vs.

BLAST of NO02G00500.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM30616.1	7.500e-133	95.69	polyadenylate-binding protein [Nannochloropsis gad...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO02G00500	NO02G00500	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO02G00500.1	NO02G00500.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO02G00500.1.cds1	NO02G00500.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00500.1.cds2	NO02G00500.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00500.1.cds3	NO02G00500.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00500.1.cds4	NO02G00500.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00500.1.cds5	NO02G00500.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00500.1.cds6	NO02G00500.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00500.1.cds7	NO02G00500.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00500.1.cds8	NO02G00500.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00500.1.cds9	NO02G00500.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00500.1.cds10	NO02G00500.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr2:168970..174460+
coding sequence from alignment at chr2:168970..174460+

mRNA sequence

>NO02G00500.1 ID=NO02G00500.1|Name=NO02G00500.1|organism=Nannochloropsis oceanica|type=mRNA|length=3965bp
CTGCGAGCGTTTGGCACCCTAATCGCGTGCTTTTCCTCCTTCATGCAAGC
ACACCCGGCTCACAGCCACTAGCTCCCGCCTTTTTCTTGTGCTCAAGCTA
CCGAGTTCATGGCATATTTCAGAGCTGGCACTGCCTGTGGCCATGCAATA
CTTGTCTCCTCTATCCCAGTCACAGAAAGAAGAAGCCTCGGGCGGGACAG
GAGGACAGATCACTCCTAGTTGGCCCACGACGTCCAGAAGACTAATTAAG
CCTGTTACTTGGCCATGTCTTCTATCTCGACCGCTTTATTTCACCCTGGG
GCCACCAATCCTTCGTGCAGTGACAGAGCGTGGGGCGTGGTGCGGATGGC
TCGGGGAAGACGAGGGGTCTCCATCACCCTTACTTGGTATTGGTTATGCG
CATGGCTAGCAGACAAGCAGCAACTCTCGCAGTCAGAGGAACATGCCGCA
CCACCTGAGCCAGCCTGTTGAACCCCTTCGCCCACGAGGCACATTTTGCA
TTGCTATTGCCACGGGTTGGTAACGGGGATGATACCGCGGGCTGCCTGGA
TGTGCTGATGGCCCAATGGTCTCCCTTCCCAGTGACATGGGGCCGGGAAT
CTTTCGCACGTCGCCTTGTCATGCTTGCCTCTAACCATATAGCCCTGTCG
CCACTACCGCACATAGACGCAATGTATGCTTGAATTCATTCTCATCATTC
TTTCCTCCTTCCTCCTCCCTCCTCCCTCCTCTTCCCTCTCCGCCACGCAA
CTAAACTCGAACACAGGGGCCCTCTCCCAGAAAAAAACTTAAACCAAAAA
AACAGAAAGACCAAACGTAACCCCCAAAAAAACATGGACGCTGCTACTGC
CAACGCGAGTGCCGGGATGAACGGGGGTGGGGCCAACATGCCCCCTCAGG
GCGCGGCGGCAGGCGGCGGGGCGGGCTCAGGCGCTCCCATGTACGGGAAT
GTGCGGTCGGCTTCTCTCTACGTCGGGGACTTGGCGCCCTCGACCACGGA
GTCACAGCTGTTTGAGGCCTTCTCGCAAATTGGGAAGATCCAGTCCATCC
GCATCCTCCGCGACGCCATTACGCGTCAGTCCCTCGGCTACGCGTACGTG
AATTTTTACGACACGATGGACGCCGAACGCGCCATTGACGTGCTGAATTT
CCAGCCAATTAACGGCCGTCCGTGCCGCGTCATGTGGGTGCAACGGGACC
CCTATCTGCGCAAGACGGGCGTGGGTAACATCGTGATCAAGAACCTGCAC
TCCACCATCGACAATAAGACACTCTTTGACACCTTCTCGGTGTTTGGGAA
CATCTTGTCGTGCAAGGTGGTGACTGATGAGCATGGCAACTCCCGCGGCT
TTGGCTTTGTCCATTTCGACTCGGAGGCATCTGCGCAGGGGTGCATCTCG
GACGTGAACGGCAAGATCATCGGAGGGCAGGAGGTGGTGGTGGAGCCCTT
CAAGCGCGGGCATAAGGTGGAGGCCCTGTGGACCAACTTATACGTGAAAA
ATGTCCCTTTGGATTGGGACGATGCTCGCTTCAAGGCGGAGTTCGAAAAA
TACGGCGAGATCACGTCAGCCGTGCTCCGGAAGGTGGACGAGTCCGAGGT
CGATGAGCAAGCGGACGACGAGGAGGGCGAGGGGGAGGGCGAGGGCGAGG
ACGGGGCGGAGGGGGAGACGAAGGAGACGAAGGAGACGAAGGAGACGAAG
GAGAAAGAAGAGAAGGACGGAGAGAAGGAAGGGGAGAAGACGGCCGAGGC
GGCGGCGACGCCTGCCAAGGCAGGGGAGGAAAAACAGGAGGAAGGAAAGA
ACGAGAAGAAGAAGGAGGAAGGGAAGCAGGTGCTACCCCCTGGCGCCAAA
AACCGTGGCTTTGGGTTTGTGAATTTTGTGGAGCACGAGTCAGCGAAGAA
GGCCATGGAGGAGATGAACGGCAAAAAGTTCCCTGAGGCGGGGTCCACGG
AGGCGGACAAGGAGATGTACGTGCGACGGTTGCAGACGAAAAAAGAGCGG
CAAAAGGAGTTGAGGGACAAACACGCCCTCATCAAGAAGGAGAGGTTGAC
CAAATTCCAGGGCTGCAACCTGTACGTGAAGAATCTCGATGAATCTTTGG
ATGACGAGTGGCTGCGCACCAGCTTTGGCAAGTTCGGTACTATCACCTCC
GCCCGTGTCATGCGCGATCAGACCACGGGCGCCTCCAAAGGTTTCGGTTT
CGTCTGTTATTCCACGCCAGAAGAGGCCTCGGCAGCCATCCAGAAGATGA
ACAACAAGATGTTTATGGGCAAGCCCGTCTACGTGGCCCTCTCGCAGGTC
GCATCCCAACGCCGGGAGATGCTGGCCGTCTCCTTCCAGCAACAGCAGCA
GCAGCGAGGCTTGCTCCCTCCCATGCAGAACGCGCCCTTTTACCCGCCTC
CGGCCGGCATGGGGATGCAGCAGCAGCAGCAGCAGCCGGCGTACCTCTCA
ATGGGTCCCTATGGCCAGCCCATGCGAGGACCGGGGTCCATGTTGCCGCA
GCGTGGGATGCCACTCAATCCTGGCATGATGCGGCCCGTGTACCGGATGC
CGGACTACCGCCGCCAGGATATGGGAGGGATGGAGGGAGTGCCCGGGGGG
ATGGTCGGCGGTCGACCGGGGCCCGGCCCGAAGCAGCCTTACAACCAAAG
GGGGCCGGGGCAGCAGCCGGGAGGAGGGGGGGGACCGCGGGGAAGGCAGC
AATCAGTGGGAAGGATGATGCAGGGAGGGCCGGGCGGGATGGGGGGCGGG
ATGCCCCCACACATGCAGGGACAGATGGGGGGCCCGCCGGAGGGGGCATA
CCCACAGGAGGGAGGGCAAGGGGGAGGAGGGGCTGGGGGGCCGCAGGGCG
GTGCGATCGATCCGACGCGCCTCGCCTCGGCGTCGGTGGAGGAGCAGAAG
ACGATTTTGGGGGAGCAGCTGTACCCCTTAATTGTGCGGCGGGAGCCTGA
GTTGGCCGGCAAGATCACGGGGATGATCTTGGAGCTGGACAACACGGAAA
TCTTGCACCTGCTGGAATCGCCCGAGTCGCTGGATGAGAAGATTCAGGAG
GCCATCAAGGTGCTGCAGGAGTTCAACACTCATGCCAAAGACGGGTCGGA
ATAAGGGATGGACGGAGGGTGTAAGTGGTCGGAAGGGTATATCTATAGTA
GGTATTTTCATTCTTGCTCAGAGCGTGAGGGTCGGGAGGTGATGAGCTGG
GAAGAAACGGCAGTTTTGTGTGGGCACTATGAAGGGCGTTGTGTGTGGAG
AAGGAGAGAAGGGGGTGGAAGAAAGGGATAAAAGGAGGGAGGGGGGTAGA
TTCAGGCGCTGAGTGTGCACGTGTATGGATGCATGGATGAGAGCATTTCA
AGCTTTAAAGGAAACGAAGGAAAGTGTGAGGCAATGACACACTTGGAGGG
AAGGAAGGAAGGAGGGAAGGAATGGTGGGGGGTGGGGGGAAGGAAAGATG
GCACCGAGCGAGGAAGTGGGAAGGGGAAACAGGTATATCAAATGAGAGAG
CCGTTTCATGCCTGTAGAACCGCACTCTTCCTTGTCCTTGACCCACCTCC
CGTGTCAAAGTGCATGCAATCTGACAAGCAAGGCAGGGAGACTCTCAGGG
GAGGTATATGGTAGGAGGGAGGGCAAGATTGTGTGCTTGTGTGTGACTTA
TCGAATTGCAACTCCTGTACCAGAAAGCGATGCGGGGTAGGGTGTCCTGT
TACAAGGTCCTTTTTTCCTTTTCATATTTCGTGCCTGCATACAGGCTTTA
AAATGGGAATGGATGCGAAAGAGGGAGAACAAAGGCGTAAGAAGAGAGCG
AGAAGGACGAGAGTGTGAGAGAAGGAGAAAGAGGAGTAAAGGAACCAGAA
GAGGTTTTTCTTTTTTAGTCCGCGAAGACCAACTATCCGCGGTCCCGAGC
AGAGCAACAACTTGAGAGTGCCCGATAAAAACGAGAAAAAAAGGAAAAAA
ACCAATAATATCTTC

protein sequence of NO02G00500.1

>NO02G00500.1-protein ID=NO02G00500.1-protein|Name=NO02G00500.1|organism=Nannochloropsis oceanica|type=polypeptide|length=757bp
MDAATANASAGMNGGGANMPPQGAAAGGGAGSGAPMYGNVRSASLYVGDL
APSTTESQLFEAFSQIGKIQSIRILRDAITRQSLGYAYVNFYDTMDAERA
IDVLNFQPINGRPCRVMWVQRDPYLRKTGVGNIVIKNLHSTIDNKTLFDT
FSVFGNILSCKVVTDEHGNSRGFGFVHFDSEASAQGCISDVNGKIIGGQE
VVVEPFKRGHKVEALWTNLYVKNVPLDWDDARFKAEFEKYGEITSAVLRK
VDESEVDEQADDEEGEGEGEGEDGAEGETKETKETKETKEKEEKDGEKEG
EKTAEAAATPAKAGEEKQEEGKNEKKKEEGKQVLPPGAKNRGFGFVNFVE
HESAKKAMEEMNGKKFPEAGSTEADKEMYVRRLQTKKERQKELRDKHALI
KKERLTKFQGCNLYVKNLDESLDDEWLRTSFGKFGTITSARVMRDQTTGA
SKGFGFVCYSTPEEASAAIQKMNNKMFMGKPVYVALSQVASQRREMLAVS
FQQQQQQRGLLPPMQNAPFYPPPAGMGMQQQQQQPAYLSMGPYGQPMRGP
GSMLPQRGMPLNPGMMRPVYRMPDYRRQDMGGMEGVPGGMVGGRPGPGPK
QPYNQRGPGQQPGGGGGPRGRQQSVGRMMQGGPGGMGGGMPPHMQGQMGG
PPEGAYPQEGGQGGGGAGGPQGGAIDPTRLASASVEEQKTILGEQLYPLI
VRREPELAGKITGMILELDNTEILHLLESPESLDEKIQEAIKVLQEFNTH
AKDGSE*

mRNA from alignment at chr2:168970..174460+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO02G00500.1 ID=NO02G00500.1|Name=NO02G00500.1|organism=Nannochloropsis oceanica|type=mRNA|length=5491bp|location=Sequence derived from alignment at chr2:168970..174460+ (Nannochloropsis oceanica)
CTGCGAGCGTTTGGCACCCTAATCGCGTGCTTTTCCTCCTTCATGCAAGC
ACACCCGGCTCACAGCCACTAGCTCCCGCCTTTTTCTTGTGCTCAAGCTA
CCGAGTTCATGGCATATTTCAGAGCTGGCACTGCCTGTGGCCATGCAATA
CTTGTCTCCTCTATCCCAGTCACAGAAAGAAGAAGCCTCGGGCGGGACAG
GAGGACAGATCACTCCTAGTTGGCCCACGACGTCCAGAAGACTAATTAAG
CCTGTTACTTGGCCATGTCTTCTATCTCGACCGCTTTATTTCACCCTGGG
GCCACCAATCCTTCGTGCAGTGACAGAGCGTGGGGCGTGGTGCGGATGGC
TCGGGGAAGACGAGGGGTCTCCATCACCCTTACTTGGTATTGGTTATGCG
CATGGCTAGCAGACAAGCAGCAACTCTCGCAGTCAGAGGAACATGCCGCA
CCACCTGAGCCAGCCTGTTGAACCCCTTCGCCCACGAGGCACATTTTGCA
TTGCTATTGCCACGGGTTGGTAACGGGGATGATACCGCGGGCTGCCTGGA
TGTGCTGATGGCCCAATGGTCTCCCTTCCCAGTGACATGGGGCCGGGAAT
CTTTCGCACGTCGCCTTGTCATGCTTGCCTCTAACCATATAGCCCTGTCG
CCACTACCGCACATAGACGCAATGTATGCTTGAATTCATTCTCATCATTC
TTTCCTCCTTCCTCCTCCCTCCTCCCTCCTCTTCCCTCTCCGCCACGCAA
CTAAACTCGAACACAGGGGCCCTCTCCCAGAAAAAAACTTAAACCAAAAA
AACAGAAAGACCAAACGTAACCCCCAAAAAAACATGGACGCTGCTACTGC
CAACGCGAGTGCCGGGATGAACGGGGGTGGGGCCAACATGCCCCCTCAGG
GCGCGGCGGCAGGCGGCGGGGCGGGCTCAGGCGCTCCCATGTACGGGAAT
GTGCGGTCGGCTTCTCTCTACGTCGGGGACTTGGCGCCCTCGACCACGGA
GTCACAGCTGTTTGAGGCCTTCTCGCAAGTATGATTAGGAACGGGCAGGC
AGGGAGGGAGGGAATGGTCGTGGGGGCCAGGGAGGACCTGTGCTTCTAAT
GTCTTGATGCCTGGGTGCAGGGAAGGTGAAGGTTGTTTGGTTGGAGTCCG
AGTTGATGAGAAAGAGGTCTTGGATATTGGTCACGGTGCAGTTTGGCATT
CTTATCACGCTCCCTTCCATACTCATCACGCACCCGCAGATTGGGAAGAT
CCAGTCCATCCGCATCCTCCGCGACGCCATTACGCGTCAGTCCCTCGGGT
ACGTTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCTTCCCTCC
CCCTCACTGGTGACTTATGCTCCCTCCTCCATCCCTGTTCCCACCAGCTA
CGCGTACGTGAATTTTTACGACACGATGGACGCCGAACGCGCCATTGACG
TGCTGAATTTCCAGCCAATTAACGGCCGTCCGTGCCGCGTCATGTGGGTG
CAACGGGACCCCTATCTGCGCAAGACGGGCGTGGGTAACATCGTGATCAA
GAACCTGCACTCCACCATCGACAATAAGACACTCTTTGACACCTTCTCGG
TGTTTGGGAACATCTTGTCGTGCAAGGTGGTGACTGATGAGCATGGCAAC
TCCCGCGGCTTTGGCTTTGTCCATTTCGACTCGGAGGTGAGTCAAGACCG
TGTATAAGACCCTCCCTCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCTTCCCTTTCTTTTCCAAT
CCCTCAAGGCTTGTGCAAGGTCGCCTCGTTTCACGCACCGCCTTATTCCC
TTCCTCCCTTCCTCCCTTCTTATCATCCGTGGCACGTCCAATTCCTCCCT
CCACCCACAGACACTCACCCTCCCTACTCCCCTCCCCCCTTCCCTCTAGG
CATCTGCGCAGGGGTGCATCTCGGACGTGAACGGCAAGATCATCGGAGGG
CAGGAGGTGGTGGTGGAGCCCTTCAAGCGCGGGCATAAGGTGGAGGCCCT
GTGGACCAACTTATACGTGAAAAATGTCCCTTTGGATTGGGACGATGCTC
GCTTCAAGGTGAGTCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCC
CTCTCCTCCCTCCTGACCACGATTTTTTCCTCTCACATGTCCTCCCTCCC
CTCACTCCAGGCGGAGTTCGAAAAATACGGCGAGATCACGTCAGCCGTGC
TCCGGAAGGTGGACGAGTCCGAGGTCGATGAGCAAGCGGACGACGAGGAG
GGCGAGGGGGAGGGCGAGGGCGAGGACGGGGCGGAGGGGGAGACGAAGGA
GACGAAGGAGACGAAGGAGACGAAGGAGAAAGAAGAGAAGGACGGAGAGA
AGGAAGGGGAGAAGACGGCCGAGGCGGCGGCGACGCCTGCCAAGGCAGGG
GAGGAAAAACAGGAGGAAGGAAAGAACGAGAAGAAGAAGGAGGAAGGGAA
GCAGGTGCTACCCCCTGGCGCCAAAAACCGTGGCTTTGGGTTTGTGAATT
TTGTGGAGCACGAGTCAGCGAAGAAGGCCATGGAGGAGATGAACGGCAAA
AAGGTGCGTGGTGACGAGGAGGGTGGGCGGGGAGGAGGAGGATGGGCGGT
GTGATGAGGAGGGAGGGAGGGGAAAGAAGGAGGGCAGTCTGTGCCCCCCC
CCCCCCCTCCCCCCTTCCCCTTCCTTCTTACTGTTCCGAGACATAGGACC
TAGCGAGTCTATTTCCTCACCCTCCGTCCCTTCCTCCCCTCCCTCCCTCC
CCTCCCTTTCTTCGTCCCTCCCTTTCTTCATTAGTTCCCTGAGGCGGGGT
CCACGGAGGCGGACAAGGAGATGTACGTGCGACGGTTGCAGACGAAAAAA
GAGCGGCAAAAGGAGTTGAGGGACAAACACGCCCTCATCAAGAAGGAGAG
GTTGACCAAATTCCAGGTACAGGGAGGGAGGGAGGGAGGGAGGGAGGGAA
GATTGCCGAGCGATCCCTGTTGTGTGGCCTTCCATTGACGTTTATGTGGC
ATCATTACTTACCCTTCCTCCCTTTCCTCTCCTCCCTCCCTCCCTCCCTC
CCTCCCTCCCTCTCCCCAGGGCTGCAACCTGTACGTGAAGAATCTCGATG
AATCTTTGGATGACGAGTGGCTGCGCACCAGCTTTGGCAAGTTCGGTACT
ATCACCTCCGCCCGTGTCATGCGCGATCAGGTACGATGCCATTCTCCTCT
CCCTCCCTCCCTCCCTCCTTCTCTCCCTCCCTCCCTGCCTCCCTTCCGTC
CTGCCTCCCTCTTCCTCCCATCCATTCGTCCCACCTCTCTCCATCCCTCC
CTCTCCCCAGACCACGGGCGCCTCCAAAGGTTTCGGTTTCGTCTGTTATT
CCACGCCAGAAGAGGCCTCGGCAGCCATCCAGAAGATGAACAACAAGATG
TTTATGGGCAAGCCCGTCTACGTGGCCCTCTCGCAGGTCGCATCCCAACG
CCGGGAGATGCTGGCCGTCTCCTTCCAGCAACAGCAGCAGCAGCGAGGCT
TGCTCCCTCCCATGCAGAACGCGCCCTTTTACCCGCCTCCGGCCGGCATG
GGGATGCAGCAGCAGCAGCAGCAGCCGGCGTACCTCTCAATGGGTCCCTA
TGGCCAGCCCATGCGAGGACCGGGGTCCATGTTGCCGCAGCGTGGGATGC
CACTCAATCCTGGTGCGCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTGTGTGATTCTCCACCGAGGAGGAACACCTGCAGTCACTCAAA
CCCCCCTCCCCCCCCCCTTCCTTCCCTTCCCCTCCTTCCCTTGACATCAC
CATTCCCCACAGGCATGATGCGGCCCGTGTACCGGATGCCGGACTACCGC
CGCCAGGATATGGGAGGGATGGAGGGAGTGCCCGGGGGGATGGTCGGCGG
TCGACCGGGGCCCGGCCCGAAGCAGCCTTACAACCAAAGGGGGCCGGGGC
AGCAGCCGGGAGGAGGGGGGGGACCGCGGGGAAGGCAGCAATCAGTGGGA
AGGATGATGCAGGGAGGGCCGGGCGGGATGGGGGGCGGGATGCCCCCACA
CATGCAGGGACAGATGGGGGGCCCGCCGGAGGGGGCATACCCACAGGAGG
GAGGGCAAGGGGGAGGAGGGGCTGGGGGGCCGCAGGGCGGTGCGATCGAT
CCGACGCGCCTCGCCTCGGCGTCGGTGGAGGAGCAGAAGACGATTTTGGG
GGAGCAGCTGTACCCCTTAATTGTGCGGCGGGAGCCTGAGTTGGCCGGCA
AGATCACGGGGATGATCTTGGAGCTGGACAACACGGTATGTCTCGGGTGA
TCGTTCTCGGGCCCTTTCTTCCCTTCCGCCCTCGTCCTTGTCCTCGTCCT
CCTTGCTTTTTTACCCCTGCTGCTCGCGGTGGCAGTGGGCAGTCTTCCGG
CGTCCTCCTTCAACTAGCGCAGTTGCTCACCTATCCCTCCCTCCATCCCT
CCCTCCCTCTCTCCCTCCACAGGAAATCTTGCACCTGCTGGAATCGCCCG
AGTCGCTGGATGAGAAGATTCAGGAGGCCATCAAGGTGCTGCAGGAGTTC
AACACTCATGCCAAAGACGGGTCGGAATAAGGGATGGACGGAGGGTGTAA
GTGGTCGGAAGGGTATATCTATAGTAGGTATTTTCATTCTTGCTCAGAGC
GTGAGGGTCGGGAGGTGATGAGCTGGGAAGAAACGGCAGTTTTGTGTGGG
CACTATGAAGGGCGTTGTGTGTGGAGAAGGAGAGAAGGGGGTGGAAGAAA
GGGATAAAAGGAGGGAGGGGGGTAGATTCAGGCGCTGAGTGTGCACGTGT
ATGGATGCATGGATGAGAGCATTTCAAGCTTTAAAGGAAACGAAGGAAAG
TGTGAGGCAATGACACACTTGGAGGGAAGGAAGGAAGGAGGGAAGGAATG
GTGGGGGGTGGGGGGAAGGAAAGATGGCACCGAGCGAGGAAGTGGGAAGG
GGAAACAGGTATATCAAATGAGAGAGCCGTTTCATGCCTGTAGAACCGCA
CTCTTCCTTGTCCTTGACCCACCTCCCGTGTCAAAGTGCATGCAATCTGA
CAAGCAAGGCAGGGAGACTCTCAGGGGAGGTATATGGTAGGAGGGAGGGC
AAGATTGTGTGCTTGTGTGTGACTTATCGAATTGCAACTCCTGTACCAGA
AAGCGATGCGGGGTAGGGTGTCCTGTTACAAGGTCCTTTTTTCCTTTTCA
TATTTCGTGCCTGCATACAGGCTTTAAAATGGGAATGGATGCGAAAGAGG
GAGAACAAAGGCGTAAGAAGAGAGCGAGAAGGACGAGAGTGTGAGAGAAG
GAGAAAGAGGAGTAAAGGAACCAGAAGAGGTTTTTCTTTTTTAGTCCGCG
AAGACCAACTATCCGCGGTCCCGAGCAGAGCAACAACTTGAGAGTGCCCG
ATAAAAACGAGAAAAAAAGGAAAAAAACCAATAATATCTTC

Coding sequence (CDS) from alignment at chr2:168970..174460+

>NO02G00500.1 ID=NO02G00500.1|Name=NO02G00500.1|organism=Nannochloropsis oceanica|type=CDS|length=2271bp|location=Sequence derived from alignment at chr2:168970..174460+ (Nannochloropsis oceanica)
ATGGACGCTGCTACTGCCAACGCGAGTGCCGGGATGAACGGGGGTGGGGC
CAACATGCCCCCTCAGGGCGCGGCGGCAGGCGGCGGGGCGGGCTCAGGCG
CTCCCATGTACGGGAATGTGCGGTCGGCTTCTCTCTACGTCGGGGACTTG
GCGCCCTCGACCACGGAGTCACAGCTGTTTGAGGCCTTCTCGCAAATTGG
GAAGATCCAGTCCATCCGCATCCTCCGCGACGCCATTACGCGTCAGTCCC
TCGGCTACGCGTACGTGAATTTTTACGACACGATGGACGCCGAACGCGCC
ATTGACGTGCTGAATTTCCAGCCAATTAACGGCCGTCCGTGCCGCGTCAT
GTGGGTGCAACGGGACCCCTATCTGCGCAAGACGGGCGTGGGTAACATCG
TGATCAAGAACCTGCACTCCACCATCGACAATAAGACACTCTTTGACACC
TTCTCGGTGTTTGGGAACATCTTGTCGTGCAAGGTGGTGACTGATGAGCA
TGGCAACTCCCGCGGCTTTGGCTTTGTCCATTTCGACTCGGAGGCATCTG
CGCAGGGGTGCATCTCGGACGTGAACGGCAAGATCATCGGAGGGCAGGAG
GTGGTGGTGGAGCCCTTCAAGCGCGGGCATAAGGTGGAGGCCCTGTGGAC
CAACTTATACGTGAAAAATGTCCCTTTGGATTGGGACGATGCTCGCTTCA
AGGCGGAGTTCGAAAAATACGGCGAGATCACGTCAGCCGTGCTCCGGAAG
GTGGACGAGTCCGAGGTCGATGAGCAAGCGGACGACGAGGAGGGCGAGGG
GGAGGGCGAGGGCGAGGACGGGGCGGAGGGGGAGACGAAGGAGACGAAGG
AGACGAAGGAGACGAAGGAGAAAGAAGAGAAGGACGGAGAGAAGGAAGGG
GAGAAGACGGCCGAGGCGGCGGCGACGCCTGCCAAGGCAGGGGAGGAAAA
ACAGGAGGAAGGAAAGAACGAGAAGAAGAAGGAGGAAGGGAAGCAGGTGC
TACCCCCTGGCGCCAAAAACCGTGGCTTTGGGTTTGTGAATTTTGTGGAG
CACGAGTCAGCGAAGAAGGCCATGGAGGAGATGAACGGCAAAAAGTTCCC
TGAGGCGGGGTCCACGGAGGCGGACAAGGAGATGTACGTGCGACGGTTGC
AGACGAAAAAAGAGCGGCAAAAGGAGTTGAGGGACAAACACGCCCTCATC
AAGAAGGAGAGGTTGACCAAATTCCAGGGCTGCAACCTGTACGTGAAGAA
TCTCGATGAATCTTTGGATGACGAGTGGCTGCGCACCAGCTTTGGCAAGT
TCGGTACTATCACCTCCGCCCGTGTCATGCGCGATCAGACCACGGGCGCC
TCCAAAGGTTTCGGTTTCGTCTGTTATTCCACGCCAGAAGAGGCCTCGGC
AGCCATCCAGAAGATGAACAACAAGATGTTTATGGGCAAGCCCGTCTACG
TGGCCCTCTCGCAGGTCGCATCCCAACGCCGGGAGATGCTGGCCGTCTCC
TTCCAGCAACAGCAGCAGCAGCGAGGCTTGCTCCCTCCCATGCAGAACGC
GCCCTTTTACCCGCCTCCGGCCGGCATGGGGATGCAGCAGCAGCAGCAGC
AGCCGGCGTACCTCTCAATGGGTCCCTATGGCCAGCCCATGCGAGGACCG
GGGTCCATGTTGCCGCAGCGTGGGATGCCACTCAATCCTGGCATGATGCG
GCCCGTGTACCGGATGCCGGACTACCGCCGCCAGGATATGGGAGGGATGG
AGGGAGTGCCCGGGGGGATGGTCGGCGGTCGACCGGGGCCCGGCCCGAAG
CAGCCTTACAACCAAAGGGGGCCGGGGCAGCAGCCGGGAGGAGGGGGGGG
ACCGCGGGGAAGGCAGCAATCAGTGGGAAGGATGATGCAGGGAGGGCCGG
GCGGGATGGGGGGCGGGATGCCCCCACACATGCAGGGACAGATGGGGGGC
CCGCCGGAGGGGGCATACCCACAGGAGGGAGGGCAAGGGGGAGGAGGGGC
TGGGGGGCCGCAGGGCGGTGCGATCGATCCGACGCGCCTCGCCTCGGCGT
CGGTGGAGGAGCAGAAGACGATTTTGGGGGAGCAGCTGTACCCCTTAATT
GTGCGGCGGGAGCCTGAGTTGGCCGGCAAGATCACGGGGATGATCTTGGA
GCTGGACAACACGGAAATCTTGCACCTGCTGGAATCGCCCGAGTCGCTGG
ATGAGAAGATTCAGGAGGCCATCAAGGTGCTGCAGGAGTTCAACACTCAT
GCCAAAGACGGGTCGGAATAA

Synonyms

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