NO02G00320.1, NO02G00320.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO02G00320.1
Unique NameNO02G00320.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1350
Alignment locationchr2:113507..114856 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:113507..114856 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G00320.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G00320NO02G00320Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO02G00320.1NO02G00320.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO02G00320.1.cds1NO02G00320.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO02G00320.1 ID=NO02G00320.1|Name=NO02G00320.1|organism=Nannochloropsis oceanica|type=mRNA|length=1350bp
ATGGCCCTTCCGCCTCCTCCAACCTCCATCTACACTCGACCCTCACTTCT
ATGCGACGTGGACGATGACGACAGCGAGCAGCAGCGGCCGTCTACCGTGT
GGTCTCCCTCAAGCCGTGTCCTCCTTTCTGCTCCATCCCCTTCCGCTCCT
CTCTTTCCGGCTGACAATCTCCACAATGAGGGACAAGACATCCCATTGGC
TTCCTCCATTTCCTCGACGTCTTCTTCTTCTACGGCCCCATTTTCCTCTC
TTTTGGGGCCCTTACCGTCGTTGGACGAATTCTTGCTGGCCGGCGAGGTG
GGCGTGGAGGAGGACGGGTGCACAGCGTCGAAGCTCCACCCGGTCTTCAC
CTTTGGTGACCCCGACAGAAGCCACCCGAATCCTTACGCCAACCAACACC
AACACTCCTCATCCTGCGGTCACCATCACCGTGGCCACGACAAAGATGAT
GAGAATGAGGGAGAGGGGCGATGGGCCGAGGTGTTTGACCTGAACGGATT
GGAAGCCGCCCTCCCGCCCGCCCAGCCAGGGGTCCGAGCCATTGGTCCAG
CTGACTACAAGTATCGCCACCCTCCACCACGGGATGAGAGCAGGATGGAG
AGAAAGAAGGAGCGGAAGGAGACAGCGGCAGCAGCAAATAATAGCCAAAC
GGCACCGAAGCGATCCCATCCCCGAAGGAGAGACGCGGCGGCAGCGGCGG
AGGGGGAAGATGAGGAGGAGGGCGAGGGGGCCAAAGATCGAGCAGCCCCC
ACGTCAGCAACAGGAGCTCCCTCCTCCAAGCCTTTACTCCCAGGCTTTCC
CTTCGTCGATGGCCCTGCGAAACAAGACCCTTCCTCTCTGGAAAGCCTCG
AGGCGGAGCTGGTGCGGATGCTCGGCCCAGAACAGCGGGAGGCCCTACGC
TTGGCATTGGACGATGAGCTGATGAGGACGAGTATACTGGAGGGAAGGGA
CGGGGAGAAAAAGATGGAGCCGGGGGAAAAGGAACAGGAGGAGGAGGAGG
AGGATGATGAAGAGAAGGGAAAAGAGGGGCAGGAGGAGTATTTCTGGTTG
TCGGAGGAGGAGATGCGGGCGACGGACTTGACGGAGCCGGCGAGGGCCTT
CAGCGATGATGGTGAGGATGATGACGAGGAGAGAGGGATGGAGGGTGAGA
AGGAGGAGGTGGATATGTTGCGGGCCGTGGATGGGAGCGTACAGGTGGCG
CCAGATTTGCAGGCGCGGGCGATAGGGATGGGGGGGAAAGGGGAGGAGAT
GATGAGAAGGGTAAAGGAGGGGATGGAGGCGGCGGTGGCAAGGATGATGC
AGGGGCAGGACGAGGAGGAGGGGGAGGAAGATGAGTTTTTTGATAGATAA
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protein sequence of NO02G00320.1

>NO02G00320.1-protein ID=NO02G00320.1-protein|Name=NO02G00320.1|organism=Nannochloropsis oceanica|type=polypeptide|length=450bp
MALPPPPTSIYTRPSLLCDVDDDDSEQQRPSTVWSPSSRVLLSAPSPSAP
LFPADNLHNEGQDIPLASSISSTSSSSTAPFSSLLGPLPSLDEFLLAGEV
GVEEDGCTASKLHPVFTFGDPDRSHPNPYANQHQHSSSCGHHHRGHDKDD
ENEGEGRWAEVFDLNGLEAALPPAQPGVRAIGPADYKYRHPPPRDESRME
RKKERKETAAAANNSQTAPKRSHPRRRDAAAAAEGEDEEEGEGAKDRAAP
TSATGAPSSKPLLPGFPFVDGPAKQDPSSLESLEAELVRMLGPEQREALR
LALDDELMRTSILEGRDGEKKMEPGEKEQEEEEEDDEEKGKEGQEEYFWL
SEEEMRATDLTEPARAFSDDGEDDDEERGMEGEKEEVDMLRAVDGSVQVA
PDLQARAIGMGGKGEEMMRRVKEGMEAAVARMMQGQDEEEGEEDEFFDR*
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mRNA from alignment at chr2:113507..114856+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO02G00320.1 ID=NO02G00320.1|Name=NO02G00320.1|organism=Nannochloropsis oceanica|type=mRNA|length=1350bp|location=Sequence derived from alignment at chr2:113507..114856+ (Nannochloropsis oceanica)
ATGGCCCTTCCGCCTCCTCCAACCTCCATCTACACTCGACCCTCACTTCT
ATGCGACGTGGACGATGACGACAGCGAGCAGCAGCGGCCGTCTACCGTGT
GGTCTCCCTCAAGCCGTGTCCTCCTTTCTGCTCCATCCCCTTCCGCTCCT
CTCTTTCCGGCTGACAATCTCCACAATGAGGGACAAGACATCCCATTGGC
TTCCTCCATTTCCTCGACGTCTTCTTCTTCTACGGCCCCATTTTCCTCTC
TTTTGGGGCCCTTACCGTCGTTGGACGAATTCTTGCTGGCCGGCGAGGTG
GGCGTGGAGGAGGACGGGTGCACAGCGTCGAAGCTCCACCCGGTCTTCAC
CTTTGGTGACCCCGACAGAAGCCACCCGAATCCTTACGCCAACCAACACC
AACACTCCTCATCCTGCGGTCACCATCACCGTGGCCACGACAAAGATGAT
GAGAATGAGGGAGAGGGGCGATGGGCCGAGGTGTTTGACCTGAACGGATT
GGAAGCCGCCCTCCCGCCCGCCCAGCCAGGGGTCCGAGCCATTGGTCCAG
CTGACTACAAGTATCGCCACCCTCCACCACGGGATGAGAGCAGGATGGAG
AGAAAGAAGGAGCGGAAGGAGACAGCGGCAGCAGCAAATAATAGCCAAAC
GGCACCGAAGCGATCCCATCCCCGAAGGAGAGACGCGGCGGCAGCGGCGG
AGGGGGAAGATGAGGAGGAGGGCGAGGGGGCCAAAGATCGAGCAGCCCCC
ACGTCAGCAACAGGAGCTCCCTCCTCCAAGCCTTTACTCCCAGGCTTTCC
CTTCGTCGATGGCCCTGCGAAACAAGACCCTTCCTCTCTGGAAAGCCTCG
AGGCGGAGCTGGTGCGGATGCTCGGCCCAGAACAGCGGGAGGCCCTACGC
TTGGCATTGGACGATGAGCTGATGAGGACGAGTATACTGGAGGGAAGGGA
CGGGGAGAAAAAGATGGAGCCGGGGGAAAAGGAACAGGAGGAGGAGGAGG
AGGATGATGAAGAGAAGGGAAAAGAGGGGCAGGAGGAGTATTTCTGGTTG
TCGGAGGAGGAGATGCGGGCGACGGACTTGACGGAGCCGGCGAGGGCCTT
CAGCGATGATGGTGAGGATGATGACGAGGAGAGAGGGATGGAGGGTGAGA
AGGAGGAGGTGGATATGTTGCGGGCCGTGGATGGGAGCGTACAGGTGGCG
CCAGATTTGCAGGCGCGGGCGATAGGGATGGGGGGGAAAGGGGAGGAGAT
GATGAGAAGGGTAAAGGAGGGGATGGAGGCGGCGGTGGCAAGGATGATGC
AGGGGCAGGACGAGGAGGAGGGGGAGGAAGATGAGTTTTTTGATAGATAA
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Coding sequence (CDS) from alignment at chr2:113507..114856+

>NO02G00320.1 ID=NO02G00320.1|Name=NO02G00320.1|organism=Nannochloropsis oceanica|type=CDS|length=1350bp|location=Sequence derived from alignment at chr2:113507..114856+ (Nannochloropsis oceanica)
ATGGCCCTTCCGCCTCCTCCAACCTCCATCTACACTCGACCCTCACTTCT
ATGCGACGTGGACGATGACGACAGCGAGCAGCAGCGGCCGTCTACCGTGT
GGTCTCCCTCAAGCCGTGTCCTCCTTTCTGCTCCATCCCCTTCCGCTCCT
CTCTTTCCGGCTGACAATCTCCACAATGAGGGACAAGACATCCCATTGGC
TTCCTCCATTTCCTCGACGTCTTCTTCTTCTACGGCCCCATTTTCCTCTC
TTTTGGGGCCCTTACCGTCGTTGGACGAATTCTTGCTGGCCGGCGAGGTG
GGCGTGGAGGAGGACGGGTGCACAGCGTCGAAGCTCCACCCGGTCTTCAC
CTTTGGTGACCCCGACAGAAGCCACCCGAATCCTTACGCCAACCAACACC
AACACTCCTCATCCTGCGGTCACCATCACCGTGGCCACGACAAAGATGAT
GAGAATGAGGGAGAGGGGCGATGGGCCGAGGTGTTTGACCTGAACGGATT
GGAAGCCGCCCTCCCGCCCGCCCAGCCAGGGGTCCGAGCCATTGGTCCAG
CTGACTACAAGTATCGCCACCCTCCACCACGGGATGAGAGCAGGATGGAG
AGAAAGAAGGAGCGGAAGGAGACAGCGGCAGCAGCAAATAATAGCCAAAC
GGCACCGAAGCGATCCCATCCCCGAAGGAGAGACGCGGCGGCAGCGGCGG
AGGGGGAAGATGAGGAGGAGGGCGAGGGGGCCAAAGATCGAGCAGCCCCC
ACGTCAGCAACAGGAGCTCCCTCCTCCAAGCCTTTACTCCCAGGCTTTCC
CTTCGTCGATGGCCCTGCGAAACAAGACCCTTCCTCTCTGGAAAGCCTCG
AGGCGGAGCTGGTGCGGATGCTCGGCCCAGAACAGCGGGAGGCCCTACGC
TTGGCATTGGACGATGAGCTGATGAGGACGAGTATACTGGAGGGAAGGGA
CGGGGAGAAAAAGATGGAGCCGGGGGAAAAGGAACAGGAGGAGGAGGAGG
AGGATGATGAAGAGAAGGGAAAAGAGGGGCAGGAGGAGTATTTCTGGTTG
TCGGAGGAGGAGATGCGGGCGACGGACTTGACGGAGCCGGCGAGGGCCTT
CAGCGATGATGGTGAGGATGATGACGAGGAGAGAGGGATGGAGGGTGAGA
AGGAGGAGGTGGATATGTTGCGGGCCGTGGATGGGAGCGTACAGGTGGCG
CCAGATTTGCAGGCGCGGGCGATAGGGATGGGGGGGAAAGGGGAGGAGAT
GATGAGAAGGGTAAAGGAGGGGATGGAGGCGGCGGTGGCAAGGATGATGC
AGGGGCAGGACGAGGAGGAGGGGGAGGAAGATGAGTTTTTTGATAGATAA
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Synonyms
Publications