NO02G00210.1, NO02G00210.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO02G00210.1
Unique NameNO02G00210.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1440
Alignment locationchr2:81398..82837 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr2genomechr2:81398..82837 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO02G00210.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO02G00210NO02G00210Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO02G00210.1NO02G00210.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO02G00210.1.cds1NO02G00210.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO02G00210.1 ID=NO02G00210.1|Name=NO02G00210.1|organism=Nannochloropsis oceanica|type=mRNA|length=1440bp
ATGTTCAAGAGACGCGGCGGCAGCCGCAGCTTTTCTCATACCATGACTCC
TCTTCCTGCACTACCTGTGGCGGGCTCTCCATCGACCAGTATCACAATTA
CCCCTACCCCCTCCGCATCCTGCAAGAAGGAAGAGAAGGACAAAGGTAAG
CAGATATCGCCGCAAAAAGGTGACTTGGGGGGCAACGACAAAGACAACCT
CAAAGAGAAGCAGGATGAGGAGCAGACCGCCCCAAGTGCTACCGCCGTCG
ATGCTGAGGACAAGGGGGAGGCTTTTACCGCAGGCAAAGCCAACGAGTAC
GAAAACGATGCTGGTGCTAATTTCTCGAAAGATTTTATAAACATTAGCAA
CAAAAAGAAACTACGGCCTGCGTGTAATTCTAAATCGAAAAGCCCCCGCG
ACTTCCACAAGACTGTTGCAGGCGTTGTGATCGTCCTAGCATTTGCGGCG
TCGGCTGCCTCCTCCTACTTCTTCTCTCAACCCCCCTTTGCGTCACGCAC
ATCAACAAGAGCGTCCCAACCAAAGGCACCTCCAGAATTCATTCCCCCGT
CCACGAGTGGAAGAAGAAAGCGCTTTCTCTTCCTATCCCCTTCCGAGTCT
CCGAAACAAACCCAAGCCCCACAAGCCCCCCCTGACATCATGCTCTACAC
CCGCGAAGGTCCCCTTATCCTCGTCCACGGCCAGACCATCGACACGCCTT
TCGAGAATGCTCGTATCTACCTGCATTACTACCTGGTCAATGCCCTCGAT
TGGCTCATCCACCCCTTCTTCCTCCAGCGGCCCAATCGCTCCTCCTCTCC
CACCCTTCCTCCTCCAGCCACTCCCACCGTCCCTCGTCCTTCTTCCCAGC
CTTCCTCCAGCCCCCCCTGCGGGCTCACTCCAGCACTACACCGGCGACCC
AAAACCTTCCTTTTGAGCCTGGTGGGGGTGGCAGGCACGTCTCTTGCCGG
CCACGCAACGGCCGGTCGAGCCGCCCAGGCCGCAGGCCATGCCCTGGTCA
AGCAACAAGCCGCGCATCGCCATTGGATGGTGGGTCACCGCACCCTTGCC
TTTTTGGGGAGGAATGTGGATCAAGTCGGAGTAGCGGTGGTGGCAGTGGG
GGAGGTGGCTTCAAGCCTGGCAATGGCTGCTTCGGGAGTAGGGACCACGG
CGTCAGGTTTGGGGTATAGGAGTGCGGGGCAGGTGGTGGGGAGTGCGCAG
ATGGTAGCCTCGGGCGTGGGCTGCACGGCAAGGAGCCTGGGAATGTTGGC
TTCGTCGGTAGGTGTACGATTGAGTAACAGTGCGGCACGAGTTGCACAGG
CTTCGGCGACGGCCTCTACGATGGCGGCCAAGCGGGCGTGGATTGCGAGG
GTGGTGCCGGCGGTGGGGTGGCTGGTGGTTGGTATGATGGCGACAAGCGT
GCTGGTGGACTGGGTGTGGTGCGTTTATACCCGGGAATGA
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protein sequence of NO02G00210.1

>NO02G00210.1-protein ID=NO02G00210.1-protein|Name=NO02G00210.1|organism=Nannochloropsis oceanica|type=polypeptide|length=480bp
MFKRRGGSRSFSHTMTPLPALPVAGSPSTSITITPTPSASCKKEEKDKGK
QISPQKGDLGGNDKDNLKEKQDEEQTAPSATAVDAEDKGEAFTAGKANEY
ENDAGANFSKDFINISNKKKLRPACNSKSKSPRDFHKTVAGVVIVLAFAA
SAASSYFFSQPPFASRTSTRASQPKAPPEFIPPSTSGRRKRFLFLSPSES
PKQTQAPQAPPDIMLYTREGPLILVHGQTIDTPFENARIYLHYYLVNALD
WLIHPFFLQRPNRSSSPTLPPPATPTVPRPSSQPSSSPPCGLTPALHRRP
KTFLLSLVGVAGTSLAGHATAGRAAQAAGHALVKQQAAHRHWMVGHRTLA
FLGRNVDQVGVAVVAVGEVASSLAMAASGVGTTASGLGYRSAGQVVGSAQ
MVASGVGCTARSLGMLASSVGVRLSNSAARVAQASATASTMAAKRAWIAR
VVPAVGWLVVGMMATSVLVDWVWCVYTRE*
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mRNA from alignment at chr2:81398..82837+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO02G00210.1 ID=NO02G00210.1|Name=NO02G00210.1|organism=Nannochloropsis oceanica|type=mRNA|length=1440bp|location=Sequence derived from alignment at chr2:81398..82837+ (Nannochloropsis oceanica)
ATGTTCAAGAGACGCGGCGGCAGCCGCAGCTTTTCTCATACCATGACTCC
TCTTCCTGCACTACCTGTGGCGGGCTCTCCATCGACCAGTATCACAATTA
CCCCTACCCCCTCCGCATCCTGCAAGAAGGAAGAGAAGGACAAAGGTAAG
CAGATATCGCCGCAAAAAGGTGACTTGGGGGGCAACGACAAAGACAACCT
CAAAGAGAAGCAGGATGAGGAGCAGACCGCCCCAAGTGCTACCGCCGTCG
ATGCTGAGGACAAGGGGGAGGCTTTTACCGCAGGCAAAGCCAACGAGTAC
GAAAACGATGCTGGTGCTAATTTCTCGAAAGATTTTATAAACATTAGCAA
CAAAAAGAAACTACGGCCTGCGTGTAATTCTAAATCGAAAAGCCCCCGCG
ACTTCCACAAGACTGTTGCAGGCGTTGTGATCGTCCTAGCATTTGCGGCG
TCGGCTGCCTCCTCCTACTTCTTCTCTCAACCCCCCTTTGCGTCACGCAC
ATCAACAAGAGCGTCCCAACCAAAGGCACCTCCAGAATTCATTCCCCCGT
CCACGAGTGGAAGAAGAAAGCGCTTTCTCTTCCTATCCCCTTCCGAGTCT
CCGAAACAAACCCAAGCCCCACAAGCCCCCCCTGACATCATGCTCTACAC
CCGCGAAGGTCCCCTTATCCTCGTCCACGGCCAGACCATCGACACGCCTT
TCGAGAATGCTCGTATCTACCTGCATTACTACCTGGTCAATGCCCTCGAT
TGGCTCATCCACCCCTTCTTCCTCCAGCGGCCCAATCGCTCCTCCTCTCC
CACCCTTCCTCCTCCAGCCACTCCCACCGTCCCTCGTCCTTCTTCCCAGC
CTTCCTCCAGCCCCCCCTGCGGGCTCACTCCAGCACTACACCGGCGACCC
AAAACCTTCCTTTTGAGCCTGGTGGGGGTGGCAGGCACGTCTCTTGCCGG
CCACGCAACGGCCGGTCGAGCCGCCCAGGCCGCAGGCCATGCCCTGGTCA
AGCAACAAGCCGCGCATCGCCATTGGATGGTGGGTCACCGCACCCTTGCC
TTTTTGGGGAGGAATGTGGATCAAGTCGGAGTAGCGGTGGTGGCAGTGGG
GGAGGTGGCTTCAAGCCTGGCAATGGCTGCTTCGGGAGTAGGGACCACGG
CGTCAGGTTTGGGGTATAGGAGTGCGGGGCAGGTGGTGGGGAGTGCGCAG
ATGGTAGCCTCGGGCGTGGGCTGCACGGCAAGGAGCCTGGGAATGTTGGC
TTCGTCGGTAGGTGTACGATTGAGTAACAGTGCGGCACGAGTTGCACAGG
CTTCGGCGACGGCCTCTACGATGGCGGCCAAGCGGGCGTGGATTGCGAGG
GTGGTGCCGGCGGTGGGGTGGCTGGTGGTTGGTATGATGGCGACAAGCGT
GCTGGTGGACTGGGTGTGGTGCGTTTATACCCGGGAATGA
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Coding sequence (CDS) from alignment at chr2:81398..82837+

>NO02G00210.1 ID=NO02G00210.1|Name=NO02G00210.1|organism=Nannochloropsis oceanica|type=CDS|length=1440bp|location=Sequence derived from alignment at chr2:81398..82837+ (Nannochloropsis oceanica)
ATGTTCAAGAGACGCGGCGGCAGCCGCAGCTTTTCTCATACCATGACTCC
TCTTCCTGCACTACCTGTGGCGGGCTCTCCATCGACCAGTATCACAATTA
CCCCTACCCCCTCCGCATCCTGCAAGAAGGAAGAGAAGGACAAAGGTAAG
CAGATATCGCCGCAAAAAGGTGACTTGGGGGGCAACGACAAAGACAACCT
CAAAGAGAAGCAGGATGAGGAGCAGACCGCCCCAAGTGCTACCGCCGTCG
ATGCTGAGGACAAGGGGGAGGCTTTTACCGCAGGCAAAGCCAACGAGTAC
GAAAACGATGCTGGTGCTAATTTCTCGAAAGATTTTATAAACATTAGCAA
CAAAAAGAAACTACGGCCTGCGTGTAATTCTAAATCGAAAAGCCCCCGCG
ACTTCCACAAGACTGTTGCAGGCGTTGTGATCGTCCTAGCATTTGCGGCG
TCGGCTGCCTCCTCCTACTTCTTCTCTCAACCCCCCTTTGCGTCACGCAC
ATCAACAAGAGCGTCCCAACCAAAGGCACCTCCAGAATTCATTCCCCCGT
CCACGAGTGGAAGAAGAAAGCGCTTTCTCTTCCTATCCCCTTCCGAGTCT
CCGAAACAAACCCAAGCCCCACAAGCCCCCCCTGACATCATGCTCTACAC
CCGCGAAGGTCCCCTTATCCTCGTCCACGGCCAGACCATCGACACGCCTT
TCGAGAATGCTCGTATCTACCTGCATTACTACCTGGTCAATGCCCTCGAT
TGGCTCATCCACCCCTTCTTCCTCCAGCGGCCCAATCGCTCCTCCTCTCC
CACCCTTCCTCCTCCAGCCACTCCCACCGTCCCTCGTCCTTCTTCCCAGC
CTTCCTCCAGCCCCCCCTGCGGGCTCACTCCAGCACTACACCGGCGACCC
AAAACCTTCCTTTTGAGCCTGGTGGGGGTGGCAGGCACGTCTCTTGCCGG
CCACGCAACGGCCGGTCGAGCCGCCCAGGCCGCAGGCCATGCCCTGGTCA
AGCAACAAGCCGCGCATCGCCATTGGATGGTGGGTCACCGCACCCTTGCC
TTTTTGGGGAGGAATGTGGATCAAGTCGGAGTAGCGGTGGTGGCAGTGGG
GGAGGTGGCTTCAAGCCTGGCAATGGCTGCTTCGGGAGTAGGGACCACGG
CGTCAGGTTTGGGGTATAGGAGTGCGGGGCAGGTGGTGGGGAGTGCGCAG
ATGGTAGCCTCGGGCGTGGGCTGCACGGCAAGGAGCCTGGGAATGTTGGC
TTCGTCGGTAGGTGTACGATTGAGTAACAGTGCGGCACGAGTTGCACAGG
CTTCGGCGACGGCCTCTACGATGGCGGCCAAGCGGGCGTGGATTGCGAGG
GTGGTGCCGGCGGTGGGGTGGCTGGTGGTTGGTATGATGGCGACAAGCGT
GCTGGTGGACTGGGTGTGGTGCGTTTATACCCGGGAATGA
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Synonyms
Publications