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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| chr2 | genome | chr2:53252..56977 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO02G00140.2 ID=NO02G00140.2|Name=NO02G00140.2|organism=Nannochloropsis oceanica|type=mRNA|length=3266bp
CTCATATATATAGAAGACGCAGCTGAATTTGAAAATCGCCGACTCTCCGA
CCTCCGCTTCGGCCTCATAACGGCTCCAAACCTGAAGGCGTAGAGGTAGG
CCCGGCATGCATCCCTTTCTCTCTTCCTCCCCGCTATGGCACAGCGCATA
GTTAGCTATCCTACCCGCGACGCTGCAACGCTCACGACACCACACAAGTA
CAGGTGTAGCACGGAAACATGAGCCGTGTGATGAAAGATGATGCCGATTA
CCAAGGGAGCATTTGATTGGCTATCCACAAGCAAGTATTTCGTTATCGGT
CAAATGGCTTGATCAAAGCGAGATCTGTACGTTGTTCTTGTCTCACTCCT
TCGATAAACGTGTTTTGACCCGATCTGGCACGCGGACGGCATCGACGCGT
GTCGTGCTGCTGACTTCCACACTGTAGAAAGAATCCCGCCTAGTGCGCGA
AGCCTCAGGCAATGTCCAAAGAATGTATTCTATGGTGCTGGGAGGCGCGA
TTCAGGACGACAGTGGAATAGTAAAGCGCAATGGCTGGGGTCTGTGCGTG
ATTTGCAGTAAACTTACGGCAACATAGTTGACATCACTAATAACTACTAT
CCCCCCACGATCATATCGCATGTCCCATAACATAGCAGCTAGGAGGACGC
AAGAGACGGTACGGGCATCATGCTGAACACTTCTGAGCTGCGGCCGCGAC
GGAAATTGGGGGAGGGAGCGCACGGGGGGGGGAAGAATGTCTTTGAGATG
GCACTGTCTGGGATGGACCAGATGATGATCGGGTGGATGATGGTGGCGGT
CGTTTTCAGCCAGCTCGTCCTTGACGAGGTACTAAGGCGGGCAGAGGCCT
CAGTCGGGACGAATGCGCGTGCATGCCTGCGAGAGGTGTATAAGGAATTG
TCCACGGTCAGTACAGTACTACTTATGCCTGCCCGTCCGTCTTCCTCCCA
CTTCCTCTCCCCCGCCTTTGCTTCCTCCCCTTTCCTCCTCATCCAAGCCC
TTCCTCCACACTCTATCTTCACTACTTTTGCCAATCTCCTACGCCATATG
ATGATGCACCATGCCAGGAATGCCACGGAAGTTGTCGAGGCCGGATAAGG
GTCAGCGCGCCACGACAATAGCCCCTTCCATCCATTCGTGGATTTCTCTC
TCAATCACTTACTAAACTCCTCTCTCCCGCCCTCTCTGCCTACCCCTCCC
CCTCCCTCCCTTTCCTCTGCATATCCACAGTTGGGTCTGATCTCTTTCAC
GCTATTTATGGTCCAGAGCTTCGAGACTCAGGTGAACGAGGCCACGCTAC
TGGCGTTTGAGTACTCCCACATCTTCGTCTTCTCATTTGCCATCGTCTAC
GTGATTCAGTCTGCGGTTGTTATCGCCTGTATCAACCCCATCAAGCGACG
CCTCATCCGCCTGCACGCGTACGGAGATGCCGTAGTCGCCGCCGTCGCTG
CCACCGTCCCCCAACCCTCTCAATATCCTCCCACTGGTGATCGGAATAGT
GATCTCTCCGTGCTAGACCGGCTATATGCCTTAATTTGTTGTGCATTTGG
CGGTGCATCGGGGGCGTCGCCGACACTGAGCCGCAGCAAGGAGGCCGTAC
GCGCCTTCGACGGGTTCCGGGCTTTTCGTCGGAAGTTTCTGAGGAAACAT
AGCTTGCCCGCATGTTTTCTATTCGACCACTACCTTATCGAAGTTTATGA
CCGCTGGGTAATATTGAAGCTGGATATTGCTACCTGGTGCTGGGCGCTTA
TGTGCGTCATATTCGGTATTCACGCCCTAGTGGCGCGCTTTCCCCACTTT
GCAGCCTTCTGCCTCAACCGCTGGACATTCTTGTGCTATGGCTGGCTCCT
TCTTCTCGCGGATTACACACTCTTCATCCTTGTCCATAGGGTGCACGAAC
GTGTCCTCAAACAGGTCCGATCAAGTAACAGCGACAGTCTCAGCGTCAGC
ACCACCTCTTCCACGTGTTCCATAGCCAACGGGAGCATGCGCTCGAGCTC
TGCCGCGAGCGTCGATGCGGCTGGTGGTAGCGGTGGGTCAGTTGGGCAGA
TGGGAGAGGAGGATGTCATGGAGGAGCTGCGACAGCGGCGGGCGGCGCTG
CATGCCCAGTATTTCCGTGAACAGAAAGAAAAAGATGGGGCTCATGAGAT
AATAGACGCCGGAATCGGAGAGAACGGAAATGAGCATGCGGATGTGGGTG
TCCTGCGGCACCCTCCCCGGCACTGGCACTGGGGCGTCGCCAACCTGCTG
AATGCTGGTGGCATCACTAACAACACCCCTACGAACAACGTCGTTGCCGA
CGGGGCCCTAGGATTTACCCTGTGGGAAAGTTTTGCTTTTAACTACGGCA
CCGAGGCACTCAGCATAATTAGGTGCCTGTATCTGGCCGCGTGGCCATGC
ACATATACTGTGCCCGCTTTCGGGGAGTGGTTCTCCACCGGCTGGGCGCT
CTTATACATCCTCGTTATTCCCATCCCGGCCATCATCACCGGTACCGTCC
TCATTCCGCGTATGGCCACGCGATTCCTCCTTGTGGGATCTCTTTCCGTC
CTAAATCTCGAGGCGTTCGATGCGGTCGTCGAGTACATGGAGGATGCCGA
GGCCGCGCTTAAAGACATCGCGCATCTCCTGCAACGCCTCACCAACATAA
ATGACACGGGAGCTAGCAGCGTGGAGCAGCTCTTCGCTTCTCTGGCCCAG
CACCATCGTCACCATCGCCTTTCTCCCTCCGATCTCACCCATGCCACCAA
CGCACGCGTCGCCCGTGCCCTTTCCCAGACCAACCCCCCCGAAAGCAGTA
GCTTCATCACATATGCCGAGCTCCGCGACTTCTTACGGCACCACGGAGTG
CACCTCCCTCTTCGCCGCTTCCGCGCGCTGGTCCGCTTCATCGACTTGGA
CCTAGGTGGCCACGTGAATTTGGAGGATTTCAGAGCCCTACTCCGGGCCG
ATCACCTCTTTGAAGCCCAGAGGCCTCATCAGTGCCCGTCGTCGGCTCGT
GTTGCACGACTCCTCAGCCAGGATACCCTGAACTATCATCCCCAAAATAG
TTTGCATGGGCAGGACGCGGTGTTTGCAGACGTGGGGCAATTGCTTCGGC
GAGGGAGCAGAGCCTTTTTAAGTCGAGTTACGCGGTCTATGGAACAAAGG
GATAGTAGTGATCGAGCAGGGGGTGTAACTGCGGCTTCGGGGGTGTAATT
TAATCGGTTGTTGTACATAATTAATGCTATAAAGTAGAAAAATCTCGACC
TTTTCAACGCGTCTAC back to topprotein sequence of NO02G00140.2 >NO02G00140.2-protein ID=NO02G00140.2-protein|Name=NO02G00140.2|organism=Nannochloropsis oceanica|type=polypeptide|length=647bp
MVQSFETQVNEATLLAFEYSHIFVFSFAIVYVIQSAVVIACINPIKRRLI
RLHAYGDAVVAAVAATVPQPSQYPPTGDRNSDLSVLDRLYALICCAFGGA
SGASPTLSRSKEAVRAFDGFRAFRRKFLRKHSLPACFLFDHYLIEVYDRW
VILKLDIATWCWALMCVIFGIHALVARFPHFAAFCLNRWTFLCYGWLLLL
ADYTLFILVHRVHERVLKQVRSSNSDSLSVSTTSSTCSIANGSMRSSSAA
SVDAAGGSGGSVGQMGEEDVMEELRQRRAALHAQYFREQKEKDGAHEIID
AGIGENGNEHADVGVLRHPPRHWHWGVANLLNAGGITNNTPTNNVVADGA
LGFTLWESFAFNYGTEALSIIRCLYLAAWPCTYTVPAFGEWFSTGWALLY
ILVIPIPAIITGTVLIPRMATRFLLVGSLSVLNLEAFDAVVEYMEDAEAA
LKDIAHLLQRLTNINDTGASSVEQLFASLAQHHRHHRLSPSDLTHATNAR
VARALSQTNPPESSSFITYAELRDFLRHHGVHLPLRRFRALVRFIDLDLG
GHVNLEDFRALLRADHLFEAQRPHQCPSSARVARLLSQDTLNYHPQNSLH
GQDAVFADVGQLLRRGSRAFLSRVTRSMEQRDSSDRAGGVTAASGV* back to topmRNA from alignment at chr2:53252..56977+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO02G00140.2 ID=NO02G00140.2|Name=NO02G00140.2|organism=Nannochloropsis oceanica|type=mRNA|length=3726bp|location=Sequence derived from alignment at chr2:53252..56977+ (Nannochloropsis oceanica)
CTCATATATATAGAAGACGCAGCTGAATTTGAAAATCGCCGACTCTCCGA
CCTCCGCTTCGGCCTCATAACGGCTCCAAACCTGAAGGCGTAGAGGTAGG
CCCGGCATGCATCCCTTTCTCTCTTCCTCCCCGCTATGGCACAGCGCATA
GTTAGCTATCCTACCCGCGACGCTGCAACGCTCACGACACCACACAAGTA
CAGGTGTAGCACGGAAACATGAGCCGTGTGATGAAAGATGATGCCGATTA
CCAAGGGAGCATTTGATTGGCTATCCACAAGCAAGTATTTCGTTATCGGT
CAAATGGCTTGATCAAAGCGAGATCTGTACGTTGTTCTTGTCTCACTCCT
TCGATAAACGTGTTTTGACCCGATCTGGCACGCGGACGGCATCGACGCGT
GTCGTGCTGCTGACTTCCACACTGTAGAAAGAATCCCGCCTAGTGCGCGA
AGCCTCAGGCAATGTCCAAAGAATGTATTCTATGGTGCTGGGAGGCGCGA
TTCAGGACGACAGTGGAATAGTAAAGCGCAATGGCTGGGGTCTGTGCGTG
ATTTGCAGTAAACTTACGGCAACATAGTTGACATCACTAATAACTACTAT
CCCCCCACGATCATATCGCATGTCCCATAACATAGCAGCTAGGAGGACGC
AAGAGACGGTACGGGCATCATGCTGAACACTTCTGAGCTGCGGCCGCGAC
GGAAATTGGGGGAGGGAGCGCACGGGGGGGGGAAGAATGTCTTTGAGATG
GCACTGTCTGGGATGGACCAGATGATGATCGGGTGGATGATGGTGGCGGT
CGTTTTCAGCCAGCTCGTCCTTGACGAGGTACTAAGGCGGGCAGAGGCCT
CAGTCGGGACGAATGCGCGTGCATGCCTGCGAGAGGTGTATAAGGAATTG
TCCACGGTCAGTACAGTACTACTTATGCCTGCCCGTCCGTCTTCCTCCCA
CTTCCTCTCCCCCGCCTTTGCTTCCTCCCCTTTCCTCCTCATCCAAGCCC
TTCCTCCACACTCTATCTTCACTACTTTTGCCAATCTCCTACGCCATATG
ATGATGCACCATGCCAGGAATGCCACGGAAGTTGTCGAGGCCGGATAAGG
GTCAGCGCGCCACGACAATAGCCCCTTCCATCCATTCGTGGATTTCTCTC
TCAATCACTTACTAAACTCCTCTCTCCCGCCCTCTCTGCCTACCCCTCCC
CCTCCCTCCCTTTCCTCTGCATATCCACAGTTGGGTCTGATCTCTTTCAC
GCTATTTATGGTCCAGAGCTTCGAGACTCAGGTGAACGAGGCCACGCTAC
TGGCGTTTGAGGTACGGAAATAATAACGGCACCTCATGCCACCTTTCTCC
CAAATGCATCACCGCCATCTCTCGTCACCACATCCACAGTACTCCCACAT
CTTCGTCTTCTCATTTGCCATCGTCTACGTGATTCAGTCTGCGGTTGTTA
TCGCCTGTATCAACCCCATCAAGCGACGCCTCATCCGCCTGCACGCGTAC
GGAGATGCCGTAGTCGCCGCCGTCGCTGCCACCGTCCCCCAACCCTCTCA
ATATCCTCCCACTGGTGATCGGAATAGTGATCTCTCCGTGCTAGACCGGC
TATATGCCTTAATTTGTTGTGCATTTGGCGGTGCATCGGGGGCGTCGCCG
ACACTGAGCCGCAGCAAGGAGGCCGTACGCGCCTTCGACGGGTTCCGGGC
TTTTCGTCGGAAGTTTCTGAGGAAACATAGCTTGCCCGCATGTTTTCTAT
TCGACCACTACCTTATCGAAGTTTATGACCGCTGGGTAATATTGAAGCTG
GATATTGCTACCTGGTGCTGGGCGCTTATGTGCGTCATATTCGGTATTCA
CGCCCTAGTGGCGCGCTTTCCCCACTTTGCAGCCTTCTGCCTCAACCGCT
GGACATTCTTGTGCTATGGCTGGCTCCTTCTTCTCGCGGATTACACACTC
TTCATCCTTGTCCATAGGGTGCGTGGGGATGGGGTAGGCTGCTCTGCTTG
CATGACAGGCAAATCTGAACTCACCTCACCCACCACCATACTCTACCGAT
CCCATCCATCAGGTGCACGAACGTGTCCTCAAACAGGTCCGATCAAGTAA
CAGCGACAGTCTCAGCGTCAGCACCACCTCTTCCACGTGTTCCATAGCCA
ACGGGAGCATGCGCTCGAGCTCTGCCGCGAGCGTCGATGCGGCTGGTGGT
AGCGGTGGGTCAGTTGGGCAGATGGGAGAGGAGGATGTCATGGAGGAGCT
GCGACAGCGGCGGGCGGCGCTGCATGCCCAGTATTTCCGTGAACAGAAAG
AAAAAGATGGGGCTCATGAGATAATAGACGCCGGAATCGGAGAGAACGGA
AATGAGCATGCGGATGTGGGTGTCCTGCGGCACCCTCCCCGGCACTGGCA
CTGGGGCGTCGCCAACCTGCTGAATGCTGGTGGCATCACTAACAACACCC
CTACGAACAACGTCGTTGCCGACGGGGCCCTAGGATTTACCCTGTGGGAA
AGTTTTGCTTTTAACTACGGCACCGAGGCACTCAGCATAATTAGGTGCCT
GTATCTGGCCGCGTGGCCATGCACATATACTGTGCCCGCTTTCGGGGAGT
GGTTCTCCACCGGCTGGGCGCTCTTATACATCCTCGTTATTCCCATCCCG
GTATGTCTTTGTGTTTTTGGTCGCACTCCAATCTTTTCCAAGCAGTGATA
GGAATGCCAATGCCACGCCTATTATCTTAATTTGTCTCTTCTAACATCAA
ATACGTGTAAATAATCTGCAGGCCATCATCACCGGTACCGTCCTCATTCC
GCGTATGGCCACGCGATTCCTCCTTGTGGGATCTCTTTCCGTCCTAAATC
TCGAGGCGTTCGATGCGGTCGTCGAGGTGAGACCATAGACTTATCTTGCG
TGTATGTTTGTGAGCGTGAGTGTACCGGTACTTAAAGACGAAGTCCGGTT
GGTGGTTTGAGTGTACTCTTGATTTTTTTCCGCGTCTTGCTGCCCAGTTC
GTTCAATTTTCTCCCCTATCCCACTTAATTACGACACGAAAAGTACATGG
AGGATGCCGAGGCCGCGCTTAAAGACATCGCGCATCTCCTGCAACGCCTC
ACCAACATAAATGACACGGGAGCTAGCAGCGTGGAGCAGCTCTTCGCTTC
TCTGGCCCAGCACCATCGTCACCATCGCCTTTCTCCCTCCGATCTCACCC
ATGCCACCAACGCACGCGTCGCCCGTGCCCTTTCCCAGACCAACCCCCCC
GAAAGCAGTAGCTTCATCACATATGCCGAGCTCCGCGACTTCTTACGGCA
CCACGGAGTGCACCTCCCTCTTCGCCGCTTCCGCGCGCTGGTCCGCTTCA
TCGACTTGGACCTAGGTGGCCACGTGAATTTGGAGGATTTCAGAGCCCTA
CTCCGGGCCGATCACCTCTTTGAAGCCCAGAGGCCTCATCAGTGCCCGTC
GTCGGCTCGTGTTGCACGACTCCTCAGCCAGGATACCCTGAACTATCATC
CCCAAAATAGTTTGCATGGGCAGGACGCGGTGTTTGCAGACGTGGGGCAA
TTGCTTCGGCGAGGGAGCAGAGCCTTTTTAAGTCGAGTTACGCGGTCTAT
GGAACAAAGGGATAGTAGTGATCGAGCAGGGGGTGTAACTGCGGCTTCGG
GGGTGTAATTTAATCGGTTGTTGTACATAATTAATGCTATAAAGTAGAAA
AATCTCGACCTTTTCAACGCGTCTAC back to topCoding sequence (CDS) from alignment at chr2:53252..56977+ >NO02G00140.2 ID=NO02G00140.2|Name=NO02G00140.2|organism=Nannochloropsis oceanica|type=CDS|length=1941bp|location=Sequence derived from alignment at chr2:53252..56977+ (Nannochloropsis oceanica)
ATGGTCCAGAGCTTCGAGACTCAGGTGAACGAGGCCACGCTACTGGCGTT
TGAGTACTCCCACATCTTCGTCTTCTCATTTGCCATCGTCTACGTGATTC
AGTCTGCGGTTGTTATCGCCTGTATCAACCCCATCAAGCGACGCCTCATC
CGCCTGCACGCGTACGGAGATGCCGTAGTCGCCGCCGTCGCTGCCACCGT
CCCCCAACCCTCTCAATATCCTCCCACTGGTGATCGGAATAGTGATCTCT
CCGTGCTAGACCGGCTATATGCCTTAATTTGTTGTGCATTTGGCGGTGCA
TCGGGGGCGTCGCCGACACTGAGCCGCAGCAAGGAGGCCGTACGCGCCTT
CGACGGGTTCCGGGCTTTTCGTCGGAAGTTTCTGAGGAAACATAGCTTGC
CCGCATGTTTTCTATTCGACCACTACCTTATCGAAGTTTATGACCGCTGG
GTAATATTGAAGCTGGATATTGCTACCTGGTGCTGGGCGCTTATGTGCGT
CATATTCGGTATTCACGCCCTAGTGGCGCGCTTTCCCCACTTTGCAGCCT
TCTGCCTCAACCGCTGGACATTCTTGTGCTATGGCTGGCTCCTTCTTCTC
GCGGATTACACACTCTTCATCCTTGTCCATAGGGTGCACGAACGTGTCCT
CAAACAGGTCCGATCAAGTAACAGCGACAGTCTCAGCGTCAGCACCACCT
CTTCCACGTGTTCCATAGCCAACGGGAGCATGCGCTCGAGCTCTGCCGCG
AGCGTCGATGCGGCTGGTGGTAGCGGTGGGTCAGTTGGGCAGATGGGAGA
GGAGGATGTCATGGAGGAGCTGCGACAGCGGCGGGCGGCGCTGCATGCCC
AGTATTTCCGTGAACAGAAAGAAAAAGATGGGGCTCATGAGATAATAGAC
GCCGGAATCGGAGAGAACGGAAATGAGCATGCGGATGTGGGTGTCCTGCG
GCACCCTCCCCGGCACTGGCACTGGGGCGTCGCCAACCTGCTGAATGCTG
GTGGCATCACTAACAACACCCCTACGAACAACGTCGTTGCCGACGGGGCC
CTAGGATTTACCCTGTGGGAAAGTTTTGCTTTTAACTACGGCACCGAGGC
ACTCAGCATAATTAGGTGCCTGTATCTGGCCGCGTGGCCATGCACATATA
CTGTGCCCGCTTTCGGGGAGTGGTTCTCCACCGGCTGGGCGCTCTTATAC
ATCCTCGTTATTCCCATCCCGGCCATCATCACCGGTACCGTCCTCATTCC
GCGTATGGCCACGCGATTCCTCCTTGTGGGATCTCTTTCCGTCCTAAATC
TCGAGGCGTTCGATGCGGTCGTCGAGTACATGGAGGATGCCGAGGCCGCG
CTTAAAGACATCGCGCATCTCCTGCAACGCCTCACCAACATAAATGACAC
GGGAGCTAGCAGCGTGGAGCAGCTCTTCGCTTCTCTGGCCCAGCACCATC
GTCACCATCGCCTTTCTCCCTCCGATCTCACCCATGCCACCAACGCACGC
GTCGCCCGTGCCCTTTCCCAGACCAACCCCCCCGAAAGCAGTAGCTTCAT
CACATATGCCGAGCTCCGCGACTTCTTACGGCACCACGGAGTGCACCTCC
CTCTTCGCCGCTTCCGCGCGCTGGTCCGCTTCATCGACTTGGACCTAGGT
GGCCACGTGAATTTGGAGGATTTCAGAGCCCTACTCCGGGCCGATCACCT
CTTTGAAGCCCAGAGGCCTCATCAGTGCCCGTCGTCGGCTCGTGTTGCAC
GACTCCTCAGCCAGGATACCCTGAACTATCATCCCCAAAATAGTTTGCAT
GGGCAGGACGCGGTGTTTGCAGACGTGGGGCAATTGCTTCGGCGAGGGAG
CAGAGCCTTTTTAAGTCGAGTTACGCGGTCTATGGAACAAAGGGATAGTA
GTGATCGAGCAGGGGGTGTAACTGCGGCTTCGGGGGTGTAA back to top
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