NO02G00090.1, NO02G00090.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO02G00090.1
Unique Name	NO02G00090.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3205
Alignment location	chr2:22616..28490 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr2	genome	chr2:22616..28490 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO02G00090.1 vs.
Match: EWM30660.1 (peptidase m1 membrane alanine aminopeptidase [Nannochloropsis gaditana])

HSP 1 Score: 1409.8 bits (3648), Expect = 0.000e+0
Identity = 725/995 (72.86%), Postives = 815/995 (81.91%), Query Frame = 0

Query:    1 MTCHHYHGVDGGGRGCRHKAVSALHKTSISKKKTGAM-KGKKREGSMDGFLLPGAKSHYAPDLMILPVHQDIHLDLTQIPQKTLKGVVDITFACQSPTEGRKVVLDAVAFAELEVGSLDAAFPVSYRYDGKKVQVVWDAAWEVGEKRRVRVLYTVTEPVAGMHFFGDGDASNGPTYVLSDHETEKARYWLPCLDLPVVRTSASFHLTTLPHHLAFANGVLVEDWMEGTGGTAAPAGAPAAEGATKTTHWRLDFLCPSYLLCVAAGALLVAKEESEESKDLLPSCPIAYIAPVGVEEEKLRLAFQPTARMLHWLANKVGNGSFVFPKYYQVMGDAHESAMENISLVSWGLNWLMDETLLKEDRLLMNSINVHEIGHSYFGDSLVIQHFEHAFLKESWATYIECCWLEDTEGQDAFLFQLYTDMRAYITEVEDDYARPIVTRTYNSSWSMYDAHLYPGGSCRLHMLRKLLGDGVFWKAIRTYVDRHMQKVVETSDFRKCLEEVSGRSLVRFFEQWFYSPSFPQLTGEWDYDEETKNITLTIEQANSTSSDNEDEDENKDGAASLFDVAFKIEVYNKDGALETTFRPSLTRTKPKVVLQAQVLRSPCYLHVNPQLATVLTLDLECEEKVLAATAQHATDVPSRIWAYEQLIKKVATPSAMTLIRKRIPAESFWGVRVAVADLLSDNPSRPSAQILAEQLKSEKDPRALYHIAEACGSFRHALLREALLEVLGRGVKLYRAKAELYASLGAQNDARDLPLLLNACLETETPVGATNNPNLLETNIVRSGALRGLSYLHAAIDPVSTTGSSSGTVTAYSYLHSRLINGGIKESQLPVRVETVEAFARAASYVQDKSTREEAARLLAELLMEENIRVAETAARALPEFLPLEAGYYGSELSSLRHRLPVQEHFSLDRMLRDLEDDNEEATPLQKLRKKMERWEERVGRWEEALEEHVADGKKHLVK--GRKEKKNGGKEEGSSEEDDSGSSDESESESESE 993
            M  +  H   GG RGCRHKAVS L   S+++ K     KG KR+ +MDGFLLPGAKSHY PDLMI PVHQDIHLDLTQIPQKTLKGVV ITFAC+SPTEGRKVVLDAVAFAEL V SLDA F +SYRYDGK+VQVVW+  W VGE+RR+RVLYTV  PVAGMHF GD     GPTY+LSDHETEKARYWLPC+D+P VRT+ASF LTT P HL+FANG    +W++   G  AP   PA    T+TT WRLD  CPSYLLCVAAGAL + KE SEESK LLP CPIAYIAPVGVEE  +RLAF+PTARMLHW+ANKVGNG+F FPKYYQVMGDAHESAMENISLVSWGLNWLMDETLLKEDRL+MNSIN+HEIGHSYFGD LVIQHFEHAFLKESWATYIECCWLEDTEGQDAFLFQLYTD+RAYITEVEDDYARPIVTRTYNSSWSMYD HLYPGGSCRLHMLRKLLGD VFW+A+R YVDR+M KVVETSDFRKCLEEVSGRSLVRFFEQWFY+PSFPQL GEW+YDEETK ITL+I+Q     SD+E++D   D    LFD+AF IEVYN++G LETT RP+LTRT  K+V+QA+V RSPCYLHVNPQLA VLTLD+ECEE++LAATA+ ATD+PSRIWAYEQLI++VATPSAM  +R+ +PAE FWGVRVAVAD+L DNPSR SAQIL E L++EKDPRAL+HIAEACG+FRH LLR+ALL+V  R   LYRAKAE+  SLG+QND +DL LLL+ C E E+  GA N+PNLLETNIV S              PV        T+ AY YL +RL +GG +E+QL VR+  VEAFARAASYVQDKSTREEAA +LA LLM+E  R AETAA AL EFLPLEA YY SEL SLRHRLPVQEHFSLDR+LRDL+D+NEEATPLQKL+KKMERWE+RVG WEEALEEHVAD  KHL+K  G+ + K       +   D+SGSS++  SESES+
Sbjct:    1 MPTYSRHAERGGERGCRHKAVSRLGNHSVNRVKNRMRRKGGKRDSTMDGFLLPGAKSHYVPDLMIFPVHQDIHLDLTQIPQKTLKGVVHITFACRSPTEGRKVVLDAVAFAELAVNSLDARFTLSYRYDGKRVQVVWENPWRVGEQRRIRVLYTVVAPVAGMHFCGDAGDGKGPTYILSDHETEKARYWLPCMDVPAVRTTASFFLTTRPEHLSFANG----EWVDSEEG--APGARPAWGQDTRTTCWRLDIPCPSYLLCVAAGALALFKEASEESKALLPGCPIAYIAPVGVEERNVRLAFEPTARMLHWIANKVGNGTFPFPKYYQVMGDAHESAMENISLVSWGLNWLMDETLLKEDRLVMNSINIHEIGHSYFGDCLVIQHFEHAFLKESWATYIECCWLEDTEGQDAFLFQLYTDLRAYITEVEDDYARPIVTRTYNSSWSMYDDHLYPGGSCRLHMLRKLLGDQVFWQAVRAYVDRNMHKVVETSDFRKCLEEVSGRSLVRFFEQWFYTPSFPQLRGEWEYDEETKVITLSIKQGEPEDSDHEEDD---DEEICLFDIAFTIEVYNREGVLETTLRPALTRTTRKIVVQAKVSRSPCYLHVNPQLAAVLTLDMECEEEILAATARRATDLPSRIWAYEQLIEEVATPSAMAHVREHLPAEPFWGVRVAVADVLGDNPSRASAQILGELLRAEKDPRALHHIAEACGAFRHPLLRDALLDVWTRQWDLYRAKAEILTSLGSQNDVQDLELLLDICREHESSEGARNDPNLLETNIVGSA------------HPV----GKHNTMNAYEYLKTRLTDGGKREAQLSVRIVVVEAFARAASYVQDKSTREEAAEILAGLLMDEEQRTAETAAWALSEFLPLEAEYYRSELFSLRHRLPVQEHFSLDRLLRDLDDENEEATPLQKLKKKMERWEDRVGAWEEALEEHVADVDKHLLKNEGKGKGKVPSGRSRTPRGDESGSSEDKGSESESQ 970

The following BLAST results are available for this feature:

BLAST of NO02G00090.1 vs.

BLAST of NO02G00090.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM30660.1	0.000e+0	72.86	peptidase m1 membrane alanine aminopeptidase [Nann...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO02G00090	NO02G00090	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO02G00090.1	NO02G00090.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO02G00090.1.cds1	NO02G00090.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00090.1.cds2	NO02G00090.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00090.1.cds3	NO02G00090.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00090.1.cds4	NO02G00090.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00090.1.cds5	NO02G00090.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00090.1.cds6	NO02G00090.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00090.1.cds7	NO02G00090.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00090.1.cds8	NO02G00090.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00090.1.cds9	NO02G00090.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00090.1.cds10	NO02G00090.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00090.1.cds11	NO02G00090.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00090.1.cds12	NO02G00090.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00090.1.cds13	NO02G00090.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00090.1.cds14	NO02G00090.1.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00090.1.cds15	NO02G00090.1.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00090.1.cds16	NO02G00090.1.cds16	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00090.1.cds17	NO02G00090.1.cds17	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00090.1.cds18	NO02G00090.1.cds18	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00090.1.cds19	NO02G00090.1.cds19	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO02G00090.1.cds20	NO02G00090.1.cds20	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr2:22616..28490+
coding sequence from alignment at chr2:22616..28490+

mRNA sequence

>NO02G00090.1 ID=NO02G00090.1|Name=NO02G00090.1|organism=Nannochloropsis oceanica|type=mRNA|length=3205bp
CAGTTAGGTGACAGCGACCGCACATACGAGCACTATGACCTGCCACCACT
ATCACGGAGTGGATGGAGGCGGGCGAGGCTGCAGGCATAAAGCCGTTTCG
GCCCTCCACAAGACGTCGATCAGCAAGAAGAAGACGGGGGCCATGAAGGG
GAAGAAGCGGGAGGGAAGCATGGATGGCTTTTTGTTGCCGGGAGCCAAGA
GCCACTATGCGCCGGACCTTATGATCTTGCCCGTGCACCAGGACATCCAC
CTGGACCTAACCCAGATTCCCCAGAAGACGCTCAAGGGCGTTGTAGATAT
CACTTTCGCCTGCCAGTCGCCCACGGAGGGGAGAAAGGTCGTGTTGGACG
CCGTGGCTTTTGCGGAGCTCGAGGTTGGTAGTCTGGACGCTGCTTTTCCT
GTCTCATACCGTTATGACGGCAAAAAGGTGCAGGTGGTGTGGGACGCGGC
GTGGGAGGTGGGCGAGAAGCGGCGGGTCCGCGTGCTGTACACTGTCACAG
AGCCAGTGGCCGGCATGCACTTCTTCGGGGACGGCGACGCCAGTAACGGT
CCGACCTACGTCCTCTCTGATCACGAGACCGAGAAAGCTCGCTACTGGCT
CCCGTGCCTGGACCTGCCCGTCGTCCGCACCAGCGCCTCCTTCCACCTCA
CCACCCTCCCCCACCACCTGGCCTTCGCAAACGGCGTGCTGGTCGAGGAC
TGGATGGAAGGCACAGGAGGAACAGCAGCACCAGCAGGAGCACCAGCGGC
GGAAGGAGCCACCAAAACCACCCACTGGCGCCTGGACTTCCTTTGTCCCT
CTTACCTCTTGTGTGTGGCCGCCGGGGCCCTGCTTGTGGCCAAGGAGGAG
TCGGAGGAGAGCAAAGACCTCCTCCCCTCGTGCCCCATCGCATACATCGC
ACCAGTTGGCGTAGAGGAGGAGAAGCTGCGCCTCGCCTTCCAGCCTACTG
CCCGGATGCTGCACTGGCTCGCGAACAAGGTCGGGAACGGCTCCTTCGTC
TTCCCCAAATACTACCAGGTGATGGGCGACGCCCACGAGTCGGCCATGGA
GAACATCTCCCTTGTCTCTTGGGGCCTCAACTGGCTCATGGATGAGACCC
TGCTAAAGGAAGACAGACTGCTGATGAACTCGATCAACGTGCACGAGATC
GGACACAGCTACTTCGGGGACTCTCTGGTGATCCAGCATTTTGAGCATGC
TTTTTTGAAGGAGAGTTGGGCCACCTACATCGAGTGCTGCTGGCTGGAGG
ACACAGAGGGGCAAGACGCCTTTTTGTTCCAGCTCTACACGGACATGCGA
GCCTACATCACGGAGGTGGAGGACGACTACGCCCGGCCGATCGTGACCAG
GACCTACAACTCCTCCTGGAGCATGTATGATGCCCATTTGTACCCCGGTG
GGTCTTGCCGGCTGCACATGCTTCGGAAGCTGCTGGGCGACGGGGTCTTC
TGGAAGGCCATCAGGACGTATGTGGACCGGCACATGCAGAAGGTGGTGGA
GACGAGCGACTTCCGAAAGTGCCTGGAAGAGGTCTCGGGCCGCTCCCTTG
TCCGCTTCTTCGAGCAATGGTTCTACTCCCCCTCCTTTCCGCAGTTGACC
GGCGAGTGGGACTACGACGAGGAGACCAAGAATATCACCCTCACGATCGA
GCAGGCAAATTCCACCTCGTCCGACAACGAGGACGAGGACGAGAACAAGG
ATGGGGCTGCTTCCTTATTTGACGTGGCTTTTAAGATCGAGGTCTACAAC
AAGGACGGGGCGCTCGAAACGACGTTCAGGCCCTCCTTGACCCGCACAAA
GCCCAAGGTTGTCCTCCAGGCGCAGGTCTTGCGCTCTCCGTGCTATTTGC
ATGTGAACCCTCAGCTGGCCACGGTGTTGACGCTTGACCTGGAGTGCGAG
GAGAAAGTGCTGGCAGCCACGGCACAACATGCCACGGACGTGCCTTCGCG
GATCTGGGCCTACGAACAGCTGATCAAGAAGGTGGCCACGCCCAGTGCTA
TGACGCTTATCCGCAAACGCATTCCTGCCGAATCCTTCTGGGGCGTGCGC
GTGGCCGTCGCCGACCTTCTGAGCGATAACCCCTCGCGACCCAGTGCGCA
GATCCTGGCCGAGCAGCTCAAGTCCGAGAAGGATCCGCGCGCACTTTACC
ATATCGCTGAGGCTTGCGGGTCCTTTCGACATGCCTTGCTGAGAGAGGCG
CTTTTGGAGGTGTTGGGACGGGGGGTGAAGCTCTATAGAGCCAAAGCTGA
GCTGTATGCCTCCCTGGGCGCTCAGAATGATGCCCGAGACTTGCCATTGC
TGCTAAATGCCTGCCTAGAGACGGAAACACCGGTGGGAGCCACCAACAAC
CCAAATCTCTTGGAAACCAACATCGTCCGCAGCGGTGCCTTGCGCGGTCT
TTCCTACCTGCATGCTGCCATAGATCCCGTGAGCACTACCGGCAGCAGCA
GTGGCACCGTTACTGCTTACTCCTACCTTCACTCCCGTCTGATCAATGGC
GGGATTAAAGAGTCCCAGCTCCCCGTCCGGGTCGAGACCGTGGAAGCTTT
CGCGCGCGCAGCGTCCTACGTCCAAGACAAGAGCACACGAGAAGAAGCAG
CGCGGCTGCTGGCTGAGCTATTGATGGAGGAGAATATTCGGGTGGCCGAG
ACGGCGGCGCGGGCGTTGCCCGAGTTTTTGCCGCTTGAGGCGGGGTATTA
TGGCAGTGAGCTTTCCTCCCTCCGACATCGCCTGCCCGTGCAAGAGCACT
TTTCGCTGGACCGCATGTTGCGTGATTTGGAGGACGATAATGAAGAGGCG
ACGCCGCTGCAGAAGCTGAGGAAGAAGATGGAGAGATGGGAAGAGAGAGT
GGGGAGGTGGGAGGAGGCGCTGGAGGAGCATGTGGCTGACGGCAAAAAGC
ACTTGGTAAAGGGGAGGAAAGAGAAGAAGAATGGAGGGAAGGAGGAGGGT
AGTAGCGAAGAGGATGACAGTGGGAGCAGTGACGAGAGTGAGAGTGAGAG
TGAGAGTGAGAGTGAGAGTGAGAGTGATAGGAAGGGTGGAGGAGGAGGGG
GAGGAAGAGGAGCAGGGAAGAAGAAGAAGCACCACGTCCACGCGCATACC
AATCGCCAGCATTGGGGAGGAGGAGGAGGAAGGGGTGGAGGAAGGGGAGG
AGGGCACAAGCATGGTCATCATAGCCGGGGGGGGGGGGACGGGGGGGAGC
AGTAG

protein sequence of NO02G00090.1

>NO02G00090.1-protein ID=NO02G00090.1-protein|Name=NO02G00090.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1057bp
MTCHHYHGVDGGGRGCRHKAVSALHKTSISKKKTGAMKGKKREGSMDGFL
LPGAKSHYAPDLMILPVHQDIHLDLTQIPQKTLKGVVDITFACQSPTEGR
KVVLDAVAFAELEVGSLDAAFPVSYRYDGKKVQVVWDAAWEVGEKRRVRV
LYTVTEPVAGMHFFGDGDASNGPTYVLSDHETEKARYWLPCLDLPVVRTS
ASFHLTTLPHHLAFANGVLVEDWMEGTGGTAAPAGAPAAEGATKTTHWRL
DFLCPSYLLCVAAGALLVAKEESEESKDLLPSCPIAYIAPVGVEEEKLRL
AFQPTARMLHWLANKVGNGSFVFPKYYQVMGDAHESAMENISLVSWGLNW
LMDETLLKEDRLLMNSINVHEIGHSYFGDSLVIQHFEHAFLKESWATYIE
CCWLEDTEGQDAFLFQLYTDMRAYITEVEDDYARPIVTRTYNSSWSMYDA
HLYPGGSCRLHMLRKLLGDGVFWKAIRTYVDRHMQKVVETSDFRKCLEEV
SGRSLVRFFEQWFYSPSFPQLTGEWDYDEETKNITLTIEQANSTSSDNED
EDENKDGAASLFDVAFKIEVYNKDGALETTFRPSLTRTKPKVVLQAQVLR
SPCYLHVNPQLATVLTLDLECEEKVLAATAQHATDVPSRIWAYEQLIKKV
ATPSAMTLIRKRIPAESFWGVRVAVADLLSDNPSRPSAQILAEQLKSEKD
PRALYHIAEACGSFRHALLREALLEVLGRGVKLYRAKAELYASLGAQNDA
RDLPLLLNACLETETPVGATNNPNLLETNIVRSGALRGLSYLHAAIDPVS
TTGSSSGTVTAYSYLHSRLINGGIKESQLPVRVETVEAFARAASYVQDKS
TREEAARLLAELLMEENIRVAETAARALPEFLPLEAGYYGSELSSLRHRL
PVQEHFSLDRMLRDLEDDNEEATPLQKLRKKMERWEERVGRWEEALEEHV
ADGKKHLVKGRKEKKNGGKEEGSSEEDDSGSSDESESESESESESESDRK
GGGGGGGRGAGKKKKHHVHAHTNRQHWGGGGGRGGGRGGGHKHGHHSRGG
GDGGEQ*

mRNA from alignment at chr2:22616..28490+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO02G00090.1 ID=NO02G00090.1|Name=NO02G00090.1|organism=Nannochloropsis oceanica|type=mRNA|length=5875bp|location=Sequence derived from alignment at chr2:22616..28490+ (Nannochloropsis oceanica)
CAGTTAGGTGACAGCGACCGCACATACGAGCACTATGACCTGCCACCACT
ATCACGGAGTGGATGGAGGCGGGCGAGGCTGCAGGTAAGATCTCTCTTCC
TCTGTGCCGCTACATCTAGATATGTTTCACACAGATTTCATCTCTTTCTC
ATCCGCCCCCTTGCCCATATACGCATGTCACAGGCATAAAGCCGTTTCGG
CCCTCCACAAGACGTCGATCAGCAAGAAGAAGACGGGGGCCATGAAGGGG
AAGAAGCGGGAGGGAAGCATGGATGGCTTTTTGTTGCCGGGAGCCAAGAG
CCACTATGCGCCGGACCTTATGATCTTGCCCGTGCACCAGGGTATGGAAG
TGGGCGTGGGTTGGATGAAGGCTGGCGGCGTGATTGATGCTTCGAGCGAT
TGTATAATTACTTCTTCCTGATTTGAATCAATTTTCGAAATCACCATCAA
TCCTTACACACACCATTACCTTTCCTGTCTTTCATCCCTCTCTCCCTCCG
CTCTGCCAGACATCCACCTGGACCTAACCCAGATTCCCCAGAAGACGCTC
AAGGGCGTTGTAGATATCACTTTCGCCTGCCAGTCGCCCACGGAGGGGAG
AAAGGTCGTGTTGGACGCCGTGGCTTTTGCGGAGCTCGAGGTACGTTGTT
AGGGAGAGGGATAGGGAGGACACGGAGACGGGAGTTTGGCGTTTCTCCGT
GTTTTGTTAAAACTGAGCACTAATGTCCCCTCTCCCTCCCTTCCTTCCTC
CCCGGGATAGGTTGGTAGTCTGGACGCTGCTTTTCCTGTCTCATACCGTT
ATGACGGCAAAAAGGTGCAGGTGGTGTGGGACGCGGCGTGGGAGGTGGGC
GAGAAGCGGCGGGTCCGCGTGCTGTACACTGTCACAGAGCCAGTGGCCGG
TGAGAAGCGAGGGAGGAATGGATAGAAAAGAAAAAGGAATGTAGAATGGT
ATATGAAGCTGACTGCGACTCACGCATTGTCTCTTTTTTACCCCGGCTCC
AGGCATGCACTTCTTCGGGGACGGCGACGCCAGTAACGGTCCGACCTACG
TCCTCTCTGATCACGAGACCGAGAAGTACGCCCCCACCTCTCCCTCCTCT
CCTCCCTGCGTCCCCCTGCGCTTTCTCTCTCTCTCTTACTCCCTAACTTC
TTACGCTGCGGACGCTCCGTCCTTCCTTTCTCCCTCTTCCCTTCTCGCAG
AGCTCGCTACTGGCTCCCGTGCCTGGACCTGCCCGTCGTCCGCACCAGCG
CCTCCTTCCACCTCACCACCCTCCCCCACCACCTGGCCTTCGCAAACGGC
GTGCTGGTCGAGGACTGGATGGAAGGCACAGGAGGAACAGCAGCACCAGC
AGGAGCACCAGCGGCGGAAGGAGGTGAGGGATCATGATAAGAGGTCGTAT
ATTTCTTTCCCTCTCCCATTTCTCTACTTGCCTCAGAGGCCTGTCACCAT
CCCTCTTTCCCCTCTTGCATTGTGCCCCCTCTTTCCCTGCCTCCCTCCCC
TTAGCCACCAAAACCACCCACTGGCGCCTGGACTTCCTTTGTCCCTCTTA
CCTCTTGTGTGTGGCCGCCGGGGCCCTGCTTGTGGCCAAGGAGGAGTCGG
AGGAGAGCAAAGACCTCCTCCCCTCGTGCCCCATCGCATACATCGCACCA
GTTGGCGTAGAGGAGGAGAAGCTGCGCCTCGCCTTCCAGGTAAAGATAAG
GCGCATGATTCCTCCCCCCTCTCCCTCCCTATCTTCCTCCCCTCCTCCCT
CCTTCGACCCCGTCGGAGATCCCGCCCACCCTCACTCCCTCCACTCCCTC
ATTTCCTCCCTATCTCCCTCTCCCTCCAGCCTACTGCCCGGATGCTGCAC
TGGCTCGCGAACAAGGTCGGGAACGGCTCCTTCGTCTTCCCCAAATACTA
CCAGGTGGGTAGGTAAGGAGGGAGGGAGGGAGGGAGGGAGGGAACGATAA
ATCGGGGCGGAGGTCGTGAAATCATGTGCGAGCCGCTGGGGTTGTTTGCC
CGACTTTTATATTCCTATTGCTCCTTGGGCATGGTGCCAGCAGTCCATCG
ATCTTCTCTTCCCTCCTTCCCTCCCTTTCCTACCTCCTCTTCCTCCCTCC
CTCTCTCACCACCCAGGTGATGGGCGACGCCCACGAGTCGGCCATGGAGA
ACATCTCCCTTGTCTCTTGGGGCCTCAACTGGCTCATGGATGAGACCCTG
CGTAAGTCAAGGGAGAAAAGGGTGGAGGGAGGGAGGGAGGGAGGGAGGGA
GGGCCGTCGATGCCAGCATGTTCGTTTCGATCCACCTTCCCACTTTTTCT
CCCTTCCTTCCTCCCCTCAATCTTCCTCCTTTTTTCAATCAGTAAAGGAA
GACAGACTGCTGATGAACTCGATCAACGTGCACGAGATCGGACACAGCTA
CTTCGGGGACTCTCTGGTGGTGAGGACGGAGGGAGGGAGGGATGGAAGGA
GGAGTAGGCTGCTGGAAGGGAGCGGATGTTGTGAACCTAATTAATGCATT
CTTTCTAACGCTCCCCCTTTCCCTCCCTCCCTCCTTCCGACTTTTGCTCC
CTCTCTGGCTTCAGATCCAGCATTTTGAGCATGCTTTTTTGAAGGAGAGT
TGGGCCACCTACATCGAGTGCTGCTGGCTGGAGGACACAGAGGGGCAAGA
CGCCTTTTTGTTCCAGGTAGAGGGAATGGGAAAGAGGGAAAGGGGGAAAG
AAGGAGGGAAGGATTGATGCAGGGTAAATGGCATAAGATGCTTCTTATGT
CCACTTCTGCGTCAATCTGATTAGTTTCCTTCCTTGCCTCCCTCCCCTCC
CCTCAGCTCTACACGGACATGCGAGCCTACATCACGGAGGTGGAGGACGA
CTACGCCCGGCCGATCGTGACCAGGACCTACAACTCCTCCTGGAGCATGT
ATGATGCCCATTTGGTGAGAGAGGGAATGAGGGAGGGTTTCAGGTAGAGG
AGGGAATGGGTAGGATTCACACTATTGCATAATGTGTCTTAACTGTAGTA
AGCTGTATTTGATCATCAGCTCACCGTCCTTACTCCGTTCTTCCCTCCAA
GTACCCCGGTGGGTCTTGCCGGCTGCACATGCTTCGGAAGCTGCTGGGCG
ACGGGGTCTTCTGGAAGGCCATCAGGACGTATGTGGACCGGTACGTGGGG
ATATGGAGTGTGTGCTTGAGCTTGGATTGATGTAACTGTGTGTCGCAACC
CTTCCTTCCCCCCCGCAGGGGAATGCGGCAACCCGTATCCCTGTGAGTAC
TACACTAATTATTCATATTTGATTGCTTCTGCAATCTCTCCCGCTGTCTG
ACCAGGCACATGCAGAAGGTGGTGGAGACGAGCGACTTCCGAAAGTGCCT
GGAAGAGGTCTCGGGCCGCTCCCTTGTCCGCTTCTTCGAGCAATGGTTCT
ACTCCCCCTCCTTTCCGCAGGTACCCATGTCCCTCCCTTCCTCCTTGGTG
TCCATCTGCACGAAATTTTGTCCTCAGTGCGAGATATCAAATAAACAAAT
CCATATATTAAATTAAAAAATCCATTTATGCCTCCCGCCGTATCCCTTCC
TTCCTCCCCTCTCCGCAGTTGACCGGCGAGTGGGACTACGACGAGGAGAC
CAAGAATATCACCCTCACGATCGAGCAGGCAAATTCCACCTCGTCCGACA
ACGAGGACGAGGACGAGAACAAGGATGGGGCTGCTTCCTTATTTGACGTG
GCTTTTAAGATCGAGGTCTACAACAAGGACGGGGCGCTCGAAACGACGTT
CAGGCCCTCCTTGACCCGCACAAAGCCCAAGGTTGTCCTCCAGGCGCAGG
TCTTGCGCTCTCCGTGCTATTTGCATGTGAACCCTCAGCTGGCCACGGTG
TTGACGCTTGGTACGTAAGAGAGAAGGAAAAGAAGGCAGAGAGATACCGG
GGGAGGAGAGACGAAAATTCAGCAAACAATGGGGTCCCATCCATCCACGC
TCATCCCGCGCACACCGGCCATGGTTGTTGGCGCACACTGACGACGCGCT
TACCCCACAGACCTGGAGTGCGAGGAGAAAGTGCTGGCAGCCACGGCACA
ACATGCCACGGACGTGCCTTCGCGGATCTGGGCCTACGAACAGCTGATCA
AGAAGGTGGCCACGCCCAGTGCTATGACGCTTATCCGGTAATGAGGGAGA
AAGGGCAAGCCGAAGGGACTTTACCTAGCTGCATTGGTGTACATAGATTA
TAATAATGTTCCACCCCCTCATTCGATTATTTCCCTTCTTATATACGCGC
CAGCAAACGCATTCCTGCCGAATCCTTCTGGGGCGTGCGCGTGGCCGTCG
CCGACCTTCTGAGCGATAACCCCTCGCGACCCAGTGCGCAGATCCTGGCC
GAGCAGCTCAAGTCCGAGAAGGATCCGCGCGCACTTTACCATATCGCTGA
GGCTTGCGGGTCCTTTCGACATGCCTTGCTGAGAGAGGCGCTTTTGGAGG
TGTTGGGACGGGGGGTGAAGCTCTATAGGTTAGTGGGGGGGGAGAAGGAA
ATACACACAAAGAAATAGGAAGTGAGGGATGGAGAGAAGATATGGTTTTG
AACAATTGTGTTTTTGACTAGGACGTTGCTGATATTGTTGTGTGGTCAAG
GGATATATAACTTTCTTCCCTCCATCACAAACAAACTATCAGAGCCAAAG
CTGAGCTGTATGCCTCCCTGGGCGCTCAGAATGATGCCCGAGACTTGCCA
TTGCTGCTAAATGCCTGCCTAGAGACGGAAACACCGGTGGGAGCCACCAA
CAACCCAAATCTCTTGGAAACCAACATCGTCCGCAGCGGTAGGTACCGAG
GGAAGGAGGGAGAAAAGGAGGGAGGGCGGTACGAAACTGGGATATAGATC
TGAGTATACCGATGAATCAGTGACCTTACAGAGAGACCAACCCGCCCTCG
CCCTTTCAAAGGTGCCTTGCGCGGTCTTTCCTACCTGCATGCTGCCATAG
ATCCCGTGAGCACTACCGGCAGCAGCAGTGGCACCGTTACTGCTTACTCC
TACCTTCACTCCCGTCTGATCAATGGCGGGATTAAAGAGTCCCAGCTCCC
CGTCCGGGTCGAGACCGTGGAAGCTTTCGCGCGCGCAGCGTCCTACGTCC
AAGACAAGAGCACACGAGAAGAAGCAGCGCGGCTGCTGGCTGAGCTATTG
ATGGAGGAGAATATTCGGGTGGCCGAGACGGCGGCGCGGGCGTTGCCCGA
GTTTTTGCCGCTTGAGGCGGGGTATTATGGCAGGTATTGAAAGAAGGGGA
ATGAAAGGATGGTTGATGGAGAGAAGTTTTGATTGGTTGAGGATGTCAAA
TCTGGTTGGCAATCATGTGGACCAAGTCAGAGACACTCTCATGCACCTTT
TCTTTGAACCTTCTCTTTACACATAGTGAGCTTTCCTCCCTCCGACATCG
CCTGCCCGTGCAAGAGCACTTTTCGCTGGACCGCATGTTGCGTGATTTGG
AGGACGATAATGAAGAGGCGACGCCGCTGCAGAAGCTGAGGAAGAAGATG
GAGAGATGGGAAGAGAGAGTGGGGAGGTGGGAGGAGGCGCTGGAGGAGCA
TGTGGCTGACGGCAAAAAGCACTTGGTAAAGGGGAGGAAAGAGAAGAAGA
ATGGAGGGAAGGAGGAGGGTAGTAGCGAAGAGGATGACAGTGGGAGCAGT
GACGAGAGTGAGAGTGAGAGTGAGAGTGAGAGTGAGAGTGAGAGTGATAG
GAAGGGTGGAGGAGGAGGGGGAGGAAGAGGAGCAGGGAAGAAGAAGAAGC
ACCACGTCCACGCGCATACCAATCGCCAGCATTGGGGAGGAGGAGGAGGA
AGGGGTGGAGGAAGGGGAGGAGGGCACAAGCATGGTCATCATAGCCGGGG
GGGGGGGGACGGGGGGGAGCAGTAG

Coding sequence (CDS) from alignment at chr2:22616..28490+

>NO02G00090.1 ID=NO02G00090.1|Name=NO02G00090.1|organism=Nannochloropsis oceanica|type=CDS|length=3171bp|location=Sequence derived from alignment at chr2:22616..28490+ (Nannochloropsis oceanica)
ATGACCTGCCACCACTATCACGGAGTGGATGGAGGCGGGCGAGGCTGCAG
GCATAAAGCCGTTTCGGCCCTCCACAAGACGTCGATCAGCAAGAAGAAGA
CGGGGGCCATGAAGGGGAAGAAGCGGGAGGGAAGCATGGATGGCTTTTTG
TTGCCGGGAGCCAAGAGCCACTATGCGCCGGACCTTATGATCTTGCCCGT
GCACCAGGACATCCACCTGGACCTAACCCAGATTCCCCAGAAGACGCTCA
AGGGCGTTGTAGATATCACTTTCGCCTGCCAGTCGCCCACGGAGGGGAGA
AAGGTCGTGTTGGACGCCGTGGCTTTTGCGGAGCTCGAGGTTGGTAGTCT
GGACGCTGCTTTTCCTGTCTCATACCGTTATGACGGCAAAAAGGTGCAGG
TGGTGTGGGACGCGGCGTGGGAGGTGGGCGAGAAGCGGCGGGTCCGCGTG
CTGTACACTGTCACAGAGCCAGTGGCCGGCATGCACTTCTTCGGGGACGG
CGACGCCAGTAACGGTCCGACCTACGTCCTCTCTGATCACGAGACCGAGA
AAGCTCGCTACTGGCTCCCGTGCCTGGACCTGCCCGTCGTCCGCACCAGC
GCCTCCTTCCACCTCACCACCCTCCCCCACCACCTGGCCTTCGCAAACGG
CGTGCTGGTCGAGGACTGGATGGAAGGCACAGGAGGAACAGCAGCACCAG
CAGGAGCACCAGCGGCGGAAGGAGCCACCAAAACCACCCACTGGCGCCTG
GACTTCCTTTGTCCCTCTTACCTCTTGTGTGTGGCCGCCGGGGCCCTGCT
TGTGGCCAAGGAGGAGTCGGAGGAGAGCAAAGACCTCCTCCCCTCGTGCC
CCATCGCATACATCGCACCAGTTGGCGTAGAGGAGGAGAAGCTGCGCCTC
GCCTTCCAGCCTACTGCCCGGATGCTGCACTGGCTCGCGAACAAGGTCGG
GAACGGCTCCTTCGTCTTCCCCAAATACTACCAGGTGATGGGCGACGCCC
ACGAGTCGGCCATGGAGAACATCTCCCTTGTCTCTTGGGGCCTCAACTGG
CTCATGGATGAGACCCTGCTAAAGGAAGACAGACTGCTGATGAACTCGAT
CAACGTGCACGAGATCGGACACAGCTACTTCGGGGACTCTCTGGTGATCC
AGCATTTTGAGCATGCTTTTTTGAAGGAGAGTTGGGCCACCTACATCGAG
TGCTGCTGGCTGGAGGACACAGAGGGGCAAGACGCCTTTTTGTTCCAGCT
CTACACGGACATGCGAGCCTACATCACGGAGGTGGAGGACGACTACGCCC
GGCCGATCGTGACCAGGACCTACAACTCCTCCTGGAGCATGTATGATGCC
CATTTGTACCCCGGTGGGTCTTGCCGGCTGCACATGCTTCGGAAGCTGCT
GGGCGACGGGGTCTTCTGGAAGGCCATCAGGACGTATGTGGACCGGCACA
TGCAGAAGGTGGTGGAGACGAGCGACTTCCGAAAGTGCCTGGAAGAGGTC
TCGGGCCGCTCCCTTGTCCGCTTCTTCGAGCAATGGTTCTACTCCCCCTC
CTTTCCGCAGTTGACCGGCGAGTGGGACTACGACGAGGAGACCAAGAATA
TCACCCTCACGATCGAGCAGGCAAATTCCACCTCGTCCGACAACGAGGAC
GAGGACGAGAACAAGGATGGGGCTGCTTCCTTATTTGACGTGGCTTTTAA
GATCGAGGTCTACAACAAGGACGGGGCGCTCGAAACGACGTTCAGGCCCT
CCTTGACCCGCACAAAGCCCAAGGTTGTCCTCCAGGCGCAGGTCTTGCGC
TCTCCGTGCTATTTGCATGTGAACCCTCAGCTGGCCACGGTGTTGACGCT
TGACCTGGAGTGCGAGGAGAAAGTGCTGGCAGCCACGGCACAACATGCCA
CGGACGTGCCTTCGCGGATCTGGGCCTACGAACAGCTGATCAAGAAGGTG
GCCACGCCCAGTGCTATGACGCTTATCCGCAAACGCATTCCTGCCGAATC
CTTCTGGGGCGTGCGCGTGGCCGTCGCCGACCTTCTGAGCGATAACCCCT
CGCGACCCAGTGCGCAGATCCTGGCCGAGCAGCTCAAGTCCGAGAAGGAT
CCGCGCGCACTTTACCATATCGCTGAGGCTTGCGGGTCCTTTCGACATGC
CTTGCTGAGAGAGGCGCTTTTGGAGGTGTTGGGACGGGGGGTGAAGCTCT
ATAGAGCCAAAGCTGAGCTGTATGCCTCCCTGGGCGCTCAGAATGATGCC
CGAGACTTGCCATTGCTGCTAAATGCCTGCCTAGAGACGGAAACACCGGT
GGGAGCCACCAACAACCCAAATCTCTTGGAAACCAACATCGTCCGCAGCG
GTGCCTTGCGCGGTCTTTCCTACCTGCATGCTGCCATAGATCCCGTGAGC
ACTACCGGCAGCAGCAGTGGCACCGTTACTGCTTACTCCTACCTTCACTC
CCGTCTGATCAATGGCGGGATTAAAGAGTCCCAGCTCCCCGTCCGGGTCG
AGACCGTGGAAGCTTTCGCGCGCGCAGCGTCCTACGTCCAAGACAAGAGC
ACACGAGAAGAAGCAGCGCGGCTGCTGGCTGAGCTATTGATGGAGGAGAA
TATTCGGGTGGCCGAGACGGCGGCGCGGGCGTTGCCCGAGTTTTTGCCGC
TTGAGGCGGGGTATTATGGCAGTGAGCTTTCCTCCCTCCGACATCGCCTG
CCCGTGCAAGAGCACTTTTCGCTGGACCGCATGTTGCGTGATTTGGAGGA
CGATAATGAAGAGGCGACGCCGCTGCAGAAGCTGAGGAAGAAGATGGAGA
GATGGGAAGAGAGAGTGGGGAGGTGGGAGGAGGCGCTGGAGGAGCATGTG
GCTGACGGCAAAAAGCACTTGGTAAAGGGGAGGAAAGAGAAGAAGAATGG
AGGGAAGGAGGAGGGTAGTAGCGAAGAGGATGACAGTGGGAGCAGTGACG
AGAGTGAGAGTGAGAGTGAGAGTGAGAGTGAGAGTGAGAGTGATAGGAAG
GGTGGAGGAGGAGGGGGAGGAAGAGGAGCAGGGAAGAAGAAGAAGCACCA
CGTCCACGCGCATACCAATCGCCAGCATTGGGGAGGAGGAGGAGGAAGGG
GTGGAGGAAGGGGAGGAGGGCACAAGCATGGTCATCATAGCCGGGGGGGG
GGGGACGGGGGGGAGCAGTAG

Synonyms

Publications