|
|
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr1 | genome | chr1:1564451..1572557 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO01G05640.1 vs.
Match: 5I9G_C (Chain C, Crystal Structure Of Designed Pentatricopeptide Repeat Protein Dppr- U8c2 In Complex With Its Target Rna U8c2) HSP 1 Score: 125.2 bits (313), Expect = 1.500e-24 Identity = 122/496 (24.60%), Postives = 208/496 (41.94%), Query Frame = 0
Query: 472 ALMDQPPPSPPPSPNDV-TYTALIHHLVREGDFQAGKDILFSMKAKGIPPSSVTICAILNAYLKQNRAQEALTFFHTVFPSFPPSSPLSSPPPSPPVHDLGVELDLKLQTTYLSLLLALRRPLSEIQAYVQAVESREGGREGWREGGGKIYALWAKACMAAREWKAAVRLIKRGHTQGVDLDNRFYTVLLDGLAQAGQSSQAMHVFKEMQSKGITPNAYAYAALLKAFTSSSFSSSSSSAARAARRRGKEVEEGEGEEGEEGGRGGGGAGRRLREYIELFDAAEAEGRLTPSVINYNALIDACGKIQDPAGAASFFQRLQASPSLRPDVVSCRRRRRRRRRRRREGGRGGAGGVWPTDRTFNPLIDRCARAGRDELVEEALALMRQYSTR--PPDVITYNSLLTAELLRGGGPQG--VLARMKEGRVKPNTITYNILLDHYSRAGDWSKAFAALEEMKQASLAPDVQTYNHLLDGLSRAGKFIEAETLFKRMMGED 963
AL+D+ P PP S DV YT ++H L R G ++ ++ ++ +G+ P+ VT +++ K + EAL F + + G++ D+ T + L + ++ + + VE +G + L C A + A++L + +G+ D Y L+DGL +AG+ +A+ +F+EM KGI P+ Y L+ + + +G + +G G +L E ++LF+ +G + PSV+ YN LID K A F+ + ++PDVV T+N LID +AG+ ++EAL L + + PDV+TYN+L+ G + + M E +KP+ +TYN L+D +AG +A EEM + + PD TY +++ RA +F EA + D
Sbjct: 1 ALLDETP-LPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTVVTYNTLIDGLCKAGKLDEALKLFEEMV-------------------EKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVE------KGIKPDVVTYNTLIDGLCKAGK-LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPSVVTYNTLIDGLCKAG----KLDEALKLFEEMVEKG-IKPSVVTYNTLIDGLCKAGKLDEALKLFEEM-VEKGIKPDVV-----------------------------TYNTLIDGLCKAGK---LDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDVVTYNTLIDGLCKAGKLDEALKLFEEMVEKGIKPDELTYRRVVESYCRAKRFEEARGFLSEVSETD 431
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO01G05640.1 ID=NO01G05640.1|Name=NO01G05640.1|organism=Nannochloropsis oceanica|type=mRNA|length=5385bp
GCTGCTGCTGCTGCTGCTGCTGCTCCAAGTGATGTTGCTGGTACCGTGAA
TACTGAAGTCGCTGCTGATCCTCGCACTGCTGTTGCTGTTGCTGCTGCAT
CAGGAGGTGGTGGTTGTGCTGCGGCTGCTGCTGGTAGTGTTGATGTCGGT
GATGCTCCTCATCCTGCCGCTGCCCATAGTGGTACTGCTGCTGCGAGTTA
TGTGGAGGGAAGATAAAAGAAGCCGGCGGCAGGTCGTGCCCGTGACTCGC
TATCCTCCGCTCATCCTCTCCCTCCCCCTCCTCCTCCCTCTTCGAGTCCG
TCGCCATCCGCACATCCCCTGACCCCGCCTGAAACCGCATCCGCTTCTTG
GTAACCGGAGCCCGACTCACGCGCACCACGTTCCCATGCACGTCTTCCTC
CGTGATTAAATGGCCTTTCCGGCGTCTGACATGCGTTGAGCTTGTGGAGT
TGGTGGTTTGGTTCGCCCCTCCATCGCCACCACCCGTCTCCTCTCCTTCC
ACCGCATGCACGATATTCCCCAGCGAGGTCTTATACAGAGTCCGGGGGGC
CTCCACAGCCATGTTGCTTGCTGTGGTGCTGGCACCGGTGGCGTGGGCGG
AGAATGAGGAGGAAGAGGAATTTGTTGTAGGAGTGGCAGGACTTCTTCCG
CCAGGGGACGAGACAGGCATCAATCTCCACGCTTACCCAAACTGGCCCCT
GCCCTTGCACCTGGCTGCCTCACTGGCTCTGGAGGGCCTCGCCCCTGTTG
TTTGATATGTGTTTTGTGGAAAAATTGATGCATGTGTGCATGCACGCTGT
TCGCGCTTGGCCCAAGGCCTTGACGTTCGAACTCTGGGCACGCCTTCGCG
CAACCCAGTTGATACCCGAGACTACCTCGTATCTCCGTGCTTGGACATGT
CTCTCCACTTCCACACACAAGCTCACACAGCGCCTTTTGTTTCACACACA
CCACACAGGCAGTACGACTACTTCGATGTGGCGTTTTCAGGGGCGGTGAC
TGTGCTGTTGCGTGAGGGAAAGAGACTAGAGTAGAGACATCATCCTATCT
GAAGCAAAGCACGGCAAATTGAAGCAGGGGCTGCACGGCGACAAGACATA
TTCTACCTCGCTTGCTAGATGCATACACAAAAAATAATACCGTGCACTTC
CCGTGTCGCCTATGATGCGGAGAGAAGAAGAGGCCGGAGGCGACGGCGCT
GGCGGCCGGGAGGCTTTGACAAAGGAACAGGGGTGGAGCAACTGCCTGCG
GTGCTCCTGACGCTAATAATAATGAGCCCCCTCTTTCTTTTCTTCATCCT
CCTATCCCTGCCTGCCCGAGCGACGGCCTTCTTTCTCCCTCTCTCGCCTT
CTTCCTCCCTCCCTTCCTCCTCATGGCACCCGGCCCCCTCCTTCCGCTCC
CCCTCCTCCTTGCCCTCTCCCGTGTTCCTCCCTCCCACCTCCTCCCTCCT
GGCCACGCCGCCCGTAGTCCTGACGGAGGAAGAGGCAGAGCGCAGCAGCG
ACCTACTCGCGGAGCTCGACGAGCTGGCTGGACGAGGGAGGTACCAAGAG
GCTCTTGCTCTCTTGAAGAGCGGAGGGTCCACTGTGGGAGCTGTACACTA
CCACAAGGCCATCGTGGCGTGTAAGATGAGTCGACAGTGGGCGCTGGCCC
TGAGGCTCCTGGAAGAAATGCGGGCGATTCCAGGCATACAGGTGATGCTT
CACACCTACGGCACGGTCATGGACATCTGTGCCTCGGCCGGGCAGCTCGA
TCAGGCCCTGCAGGTGGCGTCGTGGATGGAGTCCGCAGGACTGCCCCTCA
ACAAGGTAGCCTTTACCACCCTCCTCAAGGCGTGTGCCCAGGCCAAGCAG
GGCTTTCGCGCCCTGGAGGTGCTTCAGCGGCTGCATGCGTCTGACATCTA
TTTCGACTACCTCGGCTACCTCAAGGCAGTGGAGATATTGGGGGCGTCGG
GATTGGTCCACGAGGCCCTGAGCGAGCTCGAGGGTATGCTCGAGGAGGAG
GTGGCGGCCGACCATCGCATCTTCTTCTCCTTGATACGAAACGCCCTCCT
CCACAACCATCTCCCCGTGGCTGCGCGCACCGCCGTGCTGATGGATACGG
AGGGCTGCACTCCCCCAGCCTCCTCCCTCAAGCTCTTAATGGAATCGTTA
ATTAAAGCTGGATTAGCCGCCCGAGGACTGGAGCTGTTGGACACCGTCGG
TCCGGCGTCCTTCTCAGGCATGTCGATCAAGGTCTGGTTCAATCTCCGCC
TCCGCCTCTGCCTGAGCTGTCGGGACAAGGAGGGCGCCTTCAAGGAGCTG
GAGCAGATGCAGAACCAGGGCATCGAGCTCAACGACTCCCGCACCGTCTC
CCTCGCCCTCCGCCTCTTCACCCCCTCCCGCCCGCCCTCCCTCCCTCCCT
CCCGCCCCTCCTCCTGCTCCCTCCTCCGCCTCTTCCTCCTCCTCCGCGCC
GTCTCCGCCCCCCTCGATACGGTGGCCTATACCACCGCCATCGCCCACGC
CACCGACAGCACCGAAGCCTACGCCCTCCTCGCCCTCATGGACCAGCCCC
CGCCCTCCCCCCCGCCCTCCCCAAATGACGTGACCTACACAGCCCTCATC
CATCACCTGGTCCGAGAGGGTGACTTCCAGGCAGGGAAGGACATCCTCTT
CTCCATGAAGGCCAAGGGGATACCCCCCTCCTCCGTCACCATATGCGCCA
TTCTTAACGCCTACCTCAAGCAAAATCGGGCACAGGAGGCGCTGACCTTC
TTTCACACCGTCTTTCCTTCCTTCCCCCCTTCCTCCCCCCTCTCCTCCCC
CCCTCCCTCCCCTCCCGTCCACGACCTGGGCGTCGAGCTGGACCTGAAGC
TGCAGACCACCTACCTCTCCCTCCTCCTCGCCCTCCGTCGGCCCCTCTCC
GAGATCCAAGCCTACGTCCAGGCCGTGGAGAGCAGGGAGGGAGGGAGGGA
GGGGTGGAGGGAGGGAGGAGGGAAAATATACGCGCTGTGGGCCAAGGCCT
GTATGGCCGCTCGGGAATGGAAAGCGGCCGTGCGGTTGATCAAGCGCGGG
CACACCCAGGGCGTGGATTTGGACAATCGCTTCTACACCGTCTTGCTCGA
CGGGCTGGCGCAGGCCGGCCAAAGCAGCCAGGCCATGCATGTCTTTAAGG
AGATGCAGAGCAAGGGAATCACGCCTAATGCCTACGCCTATGCCGCTCTT
CTCAAAGCCTTCACCTCCTCCTCCTTCTCCTCTTCTTCATCTTCTGCCGC
TCGCGCGGCGCGCAGGAGAGGGAAAGAGGTCGAGGAGGGCGAGGGCGAGG
AGGGCGAGGAGGGAGGGAGGGGAGGAGGAGGGGCGGGGAGGAGGTTGAGG
GAATACATTGAGTTATTCGACGCGGCCGAGGCCGAGGGACGGCTGACTCC
CAGTGTCATCAATTATAACGCCCTCATCGACGCCTGTGGCAAAATCCAAG
ACCCCGCTGGCGCCGCCTCCTTCTTCCAGCGACTGCAGGCCTCCCCCTCC
CTTCGCCCCGACGTAGTGTCCTGCCGCAGAAGGAGGAGGAGGAGGAGGAG
GAGGAGGAGGGAGGGAGGGAGGGGGGGGGCAGGTGGTGTGTGGCCGACGG
ATCGGACGTTTAATCCGTTAATAGACCGATGCGCACGAGCAGGCCGAGAC
GAGCTGGTGGAGGAGGCCTTGGCCCTGATGAGGCAATACAGCACTCGTCC
TCCGGACGTCATCACCTACAACTCCCTCCTCACCGCCGAGCTGCTCCGCG
GGGGGGGTCCACAAGGCGTGCTGGCGAGGATGAAGGAGGGCCGGGTGAAG
CCCAACACCATCACCTACAACATACTGCTCGATCATTATTCGCGCGCCGG
CGACTGGTCCAAGGCCTTCGCGGCCCTCGAGGAGATGAAACAGGCCTCCC
TCGCCCCTGACGTGCAGACTTACAACCACCTCCTCGACGGTCTCTCTCGA
GCCGGGAAGTTTATAGAAGCCGAAACCCTCTTCAAGAGGATGATGGGGGA
GGACGAGGGGGAGGGAGGGAAGGAAGGAGGGGTAGGCATGGATTCCTTCA
CGGCCTTAGTCATGCTGACGATGTACGGAAAGCAAGGAGATCTGCATAAG
GTCGATGCGTTGGCGACCCGCCTCTTTCCCTCGATGCCGTCTGCTGAGGA
GGAGGAAGAGAGGGAGGGTGAGGGGTCACCGAAGAGCAAAACCCCGCCGG
GAGGAGGGAAGGACGCGAGAAGACGAGGGAGAGGAAGAGGAGGAGGAGGA
GGAGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGTCGGTCGAG
GGCAGCGTCGCCGGCCGTGGCGGCCAAGTTGGTCGGTATCTACCTGCAGC
ACCAACAAGCCGGCCAGGTTGTCTCGCTTCTCTCCTCCGTTCACTCCTCT
CGCCTCTTTCCTATCCAGCCGTCCTGGATATCCTCCCTCGTCCTCCACTC
CCTCCTCCGTTCCCGCCCTCAAGAAGCCTTCCGAGTGTTGGAGCTTGCGC
GATTTTCGTGGGGGGTACGTCTGAGTGGGAAGACGTATGCCGCCCTGGCA
CGTGCAGTCCTGGAAGGGGGGGAAGGGAGGGAGGGAGGGAGGGAGGCCGT
GCAGGCGGTGGAGCTGCTGTTGCTGGAGGGTCGGAGGAAGAGGGAGGTGG
CGCTGTGTAAGGATTTGGGGCTAGTGTTAGTACAGATGGTGAAGGCGGGA
AGGAGGGTGAGGAGGAGGGAGGAGGGAGGGAGGGAGGGGGAGGTGAAGGA
GGTGATTGAGGAAATGGTGGTGAAGAGGGTCGTGGGTAGGGAGGAGGCGG
ATGAGTGGCTGAGGGATATGGAGGAGGAGGAGGAGGAAGAGGAGGAAGGA
AGAGGGAGGGAGGAAGGGGGAGAGAGGGAGGAGAATAGGATAGCATAGAG
GGTTAGTGAGAATGAAATGTGTAAGGGAAATGAATGTAAGCTGACGGAGT
AGCGGGAGGGGAGGAGGGAGGGAGGGAGGGCAGAGGAAGACGTCGATATA
AAGCGATGGAAGAAAAGACCGTCGACATCAAAGGATTACGAAGCCATTGC
TTATAGACAAAGATGAAGACAATCAAGGCAAAGATAAAGAGAAATATAAA
GATAAAGACGACTCTAAATTCCGCTTTAATATGGAGACCAGGAGCCAGTC
GATTACTCACGACAACTACTGCTGTTGCTGCGGCGGCGGCGATACCGCGG
TGGTAGAATGATATGGGCCCATACTTCTTTTTTTGTTTTCCCTTCTTTTC
CCCTTCTTCTTCCCTTCTTTTTCTTATCTTCTCCGTCTTCTTCTGTTTTT
GCTTGTCCGTTGCCGATCTTTATCTGTGTGAACCGAGCTGTCCGTACACA
AAGCCTCCCTCCCTCCCCTTCCCTCCCTCCCTCCC back to topprotein sequence of NO01G05640.1 >NO01G05640.1-protein ID=NO01G05640.1-protein|Name=NO01G05640.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1260bp
MHTQKIIPCTSRVAYDAERRRGRRRRRWRPGGFDKGTGVEQLPAVLLTLI
IMSPLFLFFILLSLPARATAFFLPLSPSSSLPSSSWHPAPSFRSPSSLPS
PVFLPPTSSLLATPPVVLTEEEAERSSDLLAELDELAGRGRYQEALALLK
SGGSTVGAVHYHKAIVACKMSRQWALALRLLEEMRAIPGIQVMLHTYGTV
MDICASAGQLDQALQVASWMESAGLPLNKVAFTTLLKACAQAKQGFRALE
VLQRLHASDIYFDYLGYLKAVEILGASGLVHEALSELEGMLEEEVAADHR
IFFSLIRNALLHNHLPVAARTAVLMDTEGCTPPASSLKLLMESLIKAGLA
ARGLELLDTVGPASFSGMSIKVWFNLRLRLCLSCRDKEGAFKELEQMQNQ
GIELNDSRTVSLALRLFTPSRPPSLPPSRPSSCSLLRLFLLLRAVSAPLD
TVAYTTAIAHATDSTEAYALLALMDQPPPSPPPSPNDVTYTALIHHLVRE
GDFQAGKDILFSMKAKGIPPSSVTICAILNAYLKQNRAQEALTFFHTVFP
SFPPSSPLSSPPPSPPVHDLGVELDLKLQTTYLSLLLALRRPLSEIQAYV
QAVESREGGREGWREGGGKIYALWAKACMAAREWKAAVRLIKRGHTQGVD
LDNRFYTVLLDGLAQAGQSSQAMHVFKEMQSKGITPNAYAYAALLKAFTS
SSFSSSSSSAARAARRRGKEVEEGEGEEGEEGGRGGGGAGRRLREYIELF
DAAEAEGRLTPSVINYNALIDACGKIQDPAGAASFFQRLQASPSLRPDVV
SCRRRRRRRRRRRREGGRGGAGGVWPTDRTFNPLIDRCARAGRDELVEEA
LALMRQYSTRPPDVITYNSLLTAELLRGGGPQGVLARMKEGRVKPNTITY
NILLDHYSRAGDWSKAFAALEEMKQASLAPDVQTYNHLLDGLSRAGKFIE
AETLFKRMMGEDEGEGGKEGGVGMDSFTALVMLTMYGKQGDLHKVDALAT
RLFPSMPSAEEEEEREGEGSPKSKTPPGGGKDARRRGRGRGGGGGGGGEG
GGGGGGGGRSRAASPAVAAKLVGIYLQHQQAGQVVSLLSSVHSSRLFPIQ
PSWISSLVLHSLLRSRPQEAFRVLELARFSWGVRLSGKTYAALARAVLEG
GEGREGGREAVQAVELLLLEGRRKREVALCKDLGLVLVQMVKAGRRVRRR
EEGGREGEVKEVIEEMVVKRVVGREEADEWLRDMEEEEEEEEEGRGREEG
GEREENRIA* back to topmRNA from alignment at chr1:1564451..1572557+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO01G05640.1 ID=NO01G05640.1|Name=NO01G05640.1|organism=Nannochloropsis oceanica|type=mRNA|length=8107bp|location=Sequence derived from alignment at chr1:1564451..1572557+ (Nannochloropsis oceanica)
GCTGCTGCTGCTGCTGCTGCTGCTCCAAGTGATGTTGCTGGTACCGTGAA
TACTGAAGTCGCTGCTGATCCTCGCACTGCTGTTGCTGTTGCTGCTGCAT
CAGGAGGTGGTGGTTGTGCTGCGGCTGCTGCTGGTAGTGTTGATGTCGGT
GATGCTCCTCATCCTGCCGCTGCCCATAGTGGTACTGCTGCTGCGAGTTA
TGTGGAGGGAAGATAAAAGAAGCCGGCGGCAGGTCGTGCCCGTGACTCGC
TATCCTCCGCTCATCCTCTCCCTCCCCCTCCTCCTCCCTCTTCGAGTCCG
TCGCCATCCGCACATCCCCTGACCCCGCCTGAAACCGCATCCGCTTCTTG
GTAACCGGAGCCCGACTCACGCGCACCACGTTCCCATGCACGTCTTCCTC
CGTGATTAAATGGCCTTTCCGGCGTCTGACATGCGTTGAGCTTGTGGAGT
TGGTGGTTTGGTTCGCCCCTCCATCGCCACCACCCGTCTCCTCTCCTTCC
ACCGCATGCACGATATTCCCCAGCGAGGTCTTATACAGAGTCCGGGGGGC
CTCCACAGCCATGTTGCTTGCTGTGGTGCTGGCACCGGTGGCGTGGGCGG
AGAATGAGGAGGAAGAGGAATTTGTTGTAGGAGTGGCAGGACTTCTTCCG
CCAGGGGACGAGACAGGCATCAATCTCCACGCTTACCCAAACTGGCCCCT
GCCCTTGCACCTGGCTGCCTCACTGGCTCTGGAGGGCCTCGCCCCTGTTG
TTTGATATGTGTTTTGTGGAAAAATTGATGCATGTGTGCATGCACGCTGT
TCGCGCTTGGCCCAAGGCCTTGACGTTCGAACTCTGGGCACGCCTTCGCG
CAACCCAGTTGATACCCGAGACTACCTCGTATCTCCGTGCTTGGACATGT
CTCTCCACTTCCACACACAAGCTCACACAGCGCCTTTTGTTTCACACACA
CCACACAGGCAGTACGACTACTTCGATGTGGCGTTTTCAGGGGCGGTGAC
TGTGCTGTTGCGTGAGGGAAAGAGACTAGAGTAGAGACATCATCCTATCT
GAAGCAAAGCACGGCAAATTGAAGCAGGGGCTGCACGGCGACAAGACATA
TTCTACCTCGCTTGCTAGATGCATACACAAAAAATAATACCGTGCACTTC
CCGTGTCGCCTATGATGCGGAGAGAAGAAGAGGCCGGAGGCGACGGCGCT
GGCGGCCGGGAGGCTTTGACAAAGGAACAGGGGTGGAGCAACTGCCTGCG
GTGCTCCTGACGCTAATAATAATGAGGTGCGTGTAAATGACAAAGTTGCA
GCGAACGGCCTCCGTGCCTCTTTCAAGGGATGTAAGAGGAGGAGGAAAGG
TGGGACGAGGAGGAAAATTGTAAACAAGAGGTTATACGAGGACGCGCGAT
AGGGGTCGATTGGTCCAAGCACGTTGCCGCCCACCTCACTTCCCCTCGAC
CTCATACCCCTACCCTAACCACAGCCCCCTCTTTCTTTTCTTCATCCTCC
TATCCCTGCCTGCCCGAGCGACGGCCTTCTTTCTCCCTCTCTCGCCTTCT
TCCTCCCTCCCTTCCTCCTCATGGCACCCGGCCCCCTCCTTCCGCTCCCC
CTCCTCCTTGCCCTCTCCCGTGTTCCTCCCTCCCACCTCCTCCCTCCTGG
CCACGCCGCCCGTAGTCCTGACGGAGGAAGAGGCAGAGCGCAGCAGCGAC
CTACTCGCGGAGCTCGACGAGCTGGCTGGACGAGGGAGGTACCAAGAGGC
TCTTGCTCTCTTGAAGAGCGGAGGGTCCACTGTGGGAGCTGTACACTACC
ACAAGGTAGGGGCGGGAGGGAGGGAGGGAGGGAGGGAGAGTGATGAGACG
GACGATTTGACTTGAATCATGTGTGATTATTTGTTCATTCCTCCCTCTGT
CCCTCGTTCTTGGTAGGCCATCGTGGCGTGTAAGATGAGTCGACAGTGGG
CGCTGGCCCTGAGGCTCCTGGAAGAAATGCGGGCGATTCCAGGCATACAG
GTAGGTAGGGAGGTAGAGAGGTAGGGAGGTAGGGAGGTAGGGAGGGAGGG
GGGGAAGCATTGAATGGGAGGGCACGGTCACTCATGGTCATGAGTTCAAG
TCTTGCCTTTTGATTTATCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCGCCATCTCTCTCTCTCTCCCTCCGTCCCTCCCTCCCTCAGGTGATGC
TTCACACCTACGGCACGGTCATGGACATCTGTGCCTCGGCCGGGCAGCTC
GATCAGGCCCTGCAGGTAGGGAGGGAGGTAGGGAGGGAGGGAGGGGAGAA
AGCAGGAAGGATCAAGAGAAGGTCGTGTGTCCCACTTTCGTTCCCGTTCC
AACCCTCCCTCCCTCCCTCCCTCCATCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCGCTCCCTAGGTGGCGTCGTGGATGGAGTCCGCAGG
ACTGCCCCTCAACAAGGTAGCCTTTACCACCCTCCTCAAGGCGTGTGCCC
AGGCCAAGCAGGGCTTTCGCGCCCTGGAGGTGCTTCAGCGGCTGCATGCG
TCTGACATCTATTTCGACTACCTCGGCTACCTCAAGGTGTGTGTCTGCCC
CACCCCTCTCTCCCTCCCTCCCTCCTTCCCTTCCTCCCTCCCTCCCTCCC
TCCCTCTCTTCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCCATTCCTC
CCCTTCGCTCTTCCTCCCGGTACCGACCTTTCGTCTTCCCAACCCCTCCT
CCGTCCCTCCCTCCCTCCCTCCCTCTGTCCTTCCCTCCCTCCCTCACTCC
AGGCAGTGGAGATATTGGGGGCGTCGGGATTGGTCCACGAGGCCCTGAGC
GAGCTCGAGGGTATGCTCGAGGAGGAGGTGGCGGCCGACCATCGCATCTT
CTTCTCCTTGATACGGTACTTCCTTCCTCCCTCCCTCCCTTCCTTCCTCT
TCCTTCCTCCCTCCATCCCTCCATCCCTCCCTCCCTCCCTCCTTACACAG
TCACTAAGGCCCTTCTGGTGCCTACCCCCGTCCAACCCTCCCGCCCTCCC
TCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCCAGAAACGCCCTCC
TCCACAACCATCTCCCCGTGGCTGCGCGCACCGCCGTGCTGATGGATACG
GAGGGCTGCACTCCCCCAGCCTCCTCCCTCAAGCTCTTAATGGAATCGTT
AATTAAAGCTGGATTAGCCGCCCGAGGACTGGAGCTGTTGGACACCGTCG
GTCCGGCGTCCTTCTCAGGTAGCGAGGGAGGGAGGGAGGGAGGGGAAAGA
AGGCTGTTTGTCGCACAAGACCATCTCATCTTTAACCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCTCCCC
CTCCTTCAGGCATGTCGATCAAGGTCTGGTTCAATCTCCGCCTCCGCCTC
TGCCTGAGCTGTCGGGACAAGGAGGGCGCCTTCAAGGAGGTAGGCTATCT
CTAGAGAGGGAGGGAGGGAGGGAGGGAGGAAGGCGAGTGTGTTATGCCTA
GTTATTCCTTTCTCATATTATTTGTGCGCACGACTCATCTCCCACCCTCC
CTCCTTGCCTCCCTCCCTCCCTCCCTCCCTGCCTCCCTCCGTCCAGCTGG
AGCAGATGCAGAACCAGGGCATCGAGCTCAACGACTCCCGCACCGTCTCC
CTCGCCCTCCGCCTCTTCACCCCCTCCCGCCCGCCCTCCCTCCCTCCCTC
CCGCCCCTCCTCCTGCTCCCTCCTCCGCCTCTTCCTCCTCCTCCGCGCCG
TCTCCGCCCCCCTCGATACGGTGGCCTATACCACCGCCATCGCCCACGCC
ACCGACAGCACCGAAGCCTACGCCCTCCTCGCCCTCATGGACCAGCCCCC
GCCCTCCCCCCCGCCCTCCCCAAATGACGTGACCTACACAGCCCTCATCC
ATCACCTGGTCCGAGAGGGTGACTTCCAGGCAGGGAAGGACATCCTCTTC
TCCATGAAGGCCAAGGGGATACCCCCCTCCTCCGTCACCATATGCGCCAT
TCTTAACGCCTACCTCAAGCAAAATCGGGCACAGGAGGCGCTGACCTTCT
TTCACACCGTCTTTCCTTCCTTCCCCCCTTCCTCCCCCCTCTCCTCCCCC
CCTCCCTCCCCTCCCGTCCACGACCTGGGCGTCGAGCTGGACCTGAAGCT
GCAGACCACCTACCTCTCCCTCCTCCTCGCCCTCCGTCGGCCCCTCTCCG
AGATCCAAGCCTACGTCCAGGCCGTGGAGAGCAGGGAGGGAGGGAGGGAG
GGGTGGAGGGAGGGAGGAGGGAAAATATACGCGCTGTGGGCCAAGGCCTG
TATGGCCGCTCGGGAATGGAAAGCGGCCGTGCGGTTGATCAAGGTAGGGA
GGGAGGGAGGGAGAAAGGGAGGGAGAAAAGAAAATCGAAGCAGAAGAAGG
CGTGAAAAACGTTCTCTCCTCCCCGTCCCTCCCTCCCTCCCTCCCCCCCC
CCTTGCCTTAGCGCGGGCACACCCAGGGCGTGGATTTGGACAATCGCTTC
TACACCGTCTTGCTCGACGGGCTGGCGCAGGTAGGTAGGGAGGGATGGAG
GGAAGTTGATGAGCTAGGACAGGACGATTTTGCGGCATACTCAACCCTCC
TTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCC
CAGGCCGGCCAAAGCAGCCAGGCCATGCATGTCTTTAAGGAGATGCAGAG
CAAGGGAATCACGCCTAATGCCTACGCCTATGCCGCTCTTCTCAAAGCCT
TCACCTCCTCCTCCTTCTCCTCTTCTTCATCTTCTGCCGCTCGCGCGGCG
CGCAGGAGAGGGAAAGAGGTCGAGGAGGGCGAGGGCGAGGAGGGCGAGGA
GGGAGGGAGGGGAGGAGGAGGGGCGGGGAGGAGGTTGAGGGAATACATTG
AGTTATTCGACGCGGCCGAGGCCGAGGTAGGTAGGGAGGGAGGGAGGGAG
GGAGGGAGGGAGGGAGGGCATTAGAGACTACGGAGGTCTCGTGGATGGTC
AAACTCGCTCGCCACCACCCTACACTTCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTAGGGACGGCTGACTCCCAGTGTCATCAATTATAA
CGCCCTCATCGACGCCTGTGGCAAAATCCAAGACCCCGCTGGCGCCGCCT
CCTTCTTCCAGCGACTGCAGGTAGGCCTCTCCCTCCCTCCCTTCCTCCCT
CCCTCCCTCCCTTCCTCCCTCCTTCCCTTCTCGTCCAACCCTCCCTCGCT
TCCTCCCGCCCTCCCTCCAGGCCTCCCCCTCCCTTCGCCCCGACGTAGTG
TCCTGGTCAGTGCTCATTAAGGCTTTGGCCCATTCTGGCGATTTCGACGG
GGCTTTCGCCGCGCTCAAGGACATGATAGCAGCCGCAGAAGGAGGAGGAG
GAGGAGGAGGAGGAGGAGGGAGGGAGGGAGGGGGGGGGCAGGTGGTGTGT
GGCCGACGGATCGGACGTTTAATCCGTTAATAGACCGATGCGCACGAGCA
GGTAGGGAGAGAGGGAGGGAGAGAGAGAGGGAGGGAGGGAGGGAGGGAGG
GAGGGAAATAGGGAAGGATGAGTGGATGTGAGGAAGGCAGAGGGAGAGAT
CAGGGAGGCATGCTCACACAGTCCTTCCCATCCTCCCTCCCTCTCTCCCT
CCCTGCCTGCAGGCCGAGACGAGCTGGTGGAGGAGGCCTTGGCCCTGATG
AGGCAATACAGCACTCGTCCTCCGGACGTCATCACCTACAACTCCCTCCT
CACCGCCGAGCTGCTCCGCGGGGGGGGTCCACAAGGCGTGCTGGCGAGGA
TGAAGGAGGTGGGGAGGGAGGGAGGGAGGTGGGAAGGGAGGAAGGGAGAA
GGAAATCGGCAGCTTCTCAACATTTCTGCGGAGCGTCTGTGCCTCATTTG
TAATCACCTTCCTCCATGCGTTCTGACCCTCCCCTCCCTTCCTCCCTCCT
CAGGGCCGGGTGAAGCCCAACACCATCACCTACAACATACTGCTCGATCA
TTATTCGCGCGCCGGCGACTGGTCCAAGGCCTTCGCGGCCCTCGAGGAGA
TGAAACAGGTAGATTACCCTCCCTCCCTCACTCCCTCCCTCCGTCCCTCC
CTCCCTCCCGCCTGCCCATTCGCCTTCCCGCCCTCCCTCTCTCTTTCCCA
TAAGCCCACACCTTGCATTCAATAATCTTTCCCGCCCTTCCTCCCTCCCT
CTCTCCCTCCAGGCCTCCCTCGCCCCTGACGTGCAGACTTACAACCACCT
CCTCGACGGTCTCTCTCGAGCCGGGAAGTTTATAGAAGCCGAAACCCTCT
TCAAGAGGATGATGGGGGAGGACGAGGGGGAGGGAGGGAAGGAAGGAGGG
GTAGGCATGGATTCCTTCACGGCCTTAGTCATGCTGACGATGTACGGAAA
GGTGGGTGCCGAGGGAGGGCGGGAGGGAGGGCGGGAGGGAGGGCGGGAGG
GAGGGCGGGAGGGAGGGCGGGGTGGGCGTAGATGGTCGGTCACCTGGATG
CCACCAACATTCATTTTTATGGTCTCTCGGCTTCCTCCCTTCCTTCCTTC
CTCCCTTCCTCCCTCCCTCCCTCCCTTTAGCAAGGAGATCTGCATAAGGT
CGATGCGTTGGCGACCCGCCTCTTTCCCTCGATGCCGTCTGCTGAGGAGG
AGGAAGAGAGGGAGGGTGAGGGGTCACCGAAGAGCAAAACCCCGCCGGGA
GGAGGGAAGGACGCGAGAAGACGAGGGAGAGGAAGAGGAGGAGGAGGAGG
AGGAGGAGGAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGTCGGTCGAGGG
CAGCGTCGCCGGCCGTGGCGGCCAAGTTGGTCGGTATCTACCTGCAGGTA
AGGAAGGAGGGAGGGAGGGAAGGAGGGAGGGAGGGAGGGAGGGAGAGAGG
GAGAGAAGAGGGAAGGAAGGAGAACATAGGGAAGAAGGGAGCCAAATCAC
CGGTCTTTTTCCTTCGGATCAACCTTATTTTCCCCTCCCTCCCTCCCTCC
CACCCTCCCTCCCTCCCCCAGCACCAACAAGCCGGCCAGGTTGTCTCGCT
TCTCTCCTCCGTTCACTCCTCTCGCCTCTTTCCTATCCAGCCGTCCTGGA
TATCCTCCCTCGTCCTCCACTCCCTCCTCCGTTCCCGCCCTCAAGAAGCC
TTCCGAGTGTTGGAGCTTGCGCGATTTTCGTGGGGGGTACGTCTGAGTGG
GAAGACGTATGCCGCCCTGGCACGTGCAGTCCTGGAAGGGGGGGAAGGGA
GGGAGGGAGGGAGGGAGGCCGTGCAGGCGGTGGAGCTGCTGTTGCTGGAG
GGTCGGAGGAAGAGGGAGGTGGCGCTGTGTAAGGATTTGGGGCTAGTGTT
AGTACAGATGGTGAAGGCGGGAAGGAGGGTGAGGAGGAGGGAGGAGGGAG
GGAGGGAGGGGGAGGTGAAGGAGGTGATTGAGGAAATGGTGGTGAAGAGG
GTCGTGGGTAGGGAGGAGGCGGATGAGTGGCTGAGGGATATGGAGGAGGA
GGAGGAGGAAGAGGAGGAAGGAAGAGGGAGGGAGGAAGGGGGAGAGAGGG
AGGAGAATAGGATAGCATAGAGGGTTAGTGAGAATGAAATGTGTAAGGGA
AATGAATGTAAGCTGACGGAGTAGCGGGAGGGGAGGAGGGAGGGAGGGAG
GGCAGAGGAAGACGTCGATATAAAGCGATGGAAGAAAAGACCGTCGACAT
CAAAGGATTACGAAGCCATTGCTTATAGACAAAGATGAAGACAATCAAGG
CAAAGATAAAGAGAAATATAAAGATAAAGACGACTCTAAATTCCGCTTTA
ATATGGAGACCAGGAGCCAGTCGATTACTCACGACAACTACTGCTGTTGC
TGCGGCGGCGGCGATACCGCGGTGGTAGAATGATATGGGCCCATACTTCT
TTTTTTGTTTTCCCTTCTTTTCCCCTTCTTCTTCCCTTCTTTTTCTTATC
TTCTCCGTCTTCTTCTGTTTTTGCTTGTCCGTTGCCGATCTTTATCTGTG
TGAACCGAGCTGTCCGTACACAAAGCCTCCCTCCCTCCCCTTCCCTCCCT
CCCTCCC back to topCoding sequence (CDS) from alignment at chr1:1564451..1572557+ >NO01G05640.1 ID=NO01G05640.1|Name=NO01G05640.1|organism=Nannochloropsis oceanica|type=CDS|length=3780bp|location=Sequence derived from alignment at chr1:1564451..1572557+ (Nannochloropsis oceanica)
ATGCATACACAAAAAATAATACCGTGCACTTCCCGTGTCGCCTATGATGC
GGAGAGAAGAAGAGGCCGGAGGCGACGGCGCTGGCGGCCGGGAGGCTTTG
ACAAAGGAACAGGGGTGGAGCAACTGCCTGCGGTGCTCCTGACGCTAATA
ATAATGAGCCCCCTCTTTCTTTTCTTCATCCTCCTATCCCTGCCTGCCCG
AGCGACGGCCTTCTTTCTCCCTCTCTCGCCTTCTTCCTCCCTCCCTTCCT
CCTCATGGCACCCGGCCCCCTCCTTCCGCTCCCCCTCCTCCTTGCCCTCT
CCCGTGTTCCTCCCTCCCACCTCCTCCCTCCTGGCCACGCCGCCCGTAGT
CCTGACGGAGGAAGAGGCAGAGCGCAGCAGCGACCTACTCGCGGAGCTCG
ACGAGCTGGCTGGACGAGGGAGGTACCAAGAGGCTCTTGCTCTCTTGAAG
AGCGGAGGGTCCACTGTGGGAGCTGTACACTACCACAAGGCCATCGTGGC
GTGTAAGATGAGTCGACAGTGGGCGCTGGCCCTGAGGCTCCTGGAAGAAA
TGCGGGCGATTCCAGGCATACAGGTGATGCTTCACACCTACGGCACGGTC
ATGGACATCTGTGCCTCGGCCGGGCAGCTCGATCAGGCCCTGCAGGTGGC
GTCGTGGATGGAGTCCGCAGGACTGCCCCTCAACAAGGTAGCCTTTACCA
CCCTCCTCAAGGCGTGTGCCCAGGCCAAGCAGGGCTTTCGCGCCCTGGAG
GTGCTTCAGCGGCTGCATGCGTCTGACATCTATTTCGACTACCTCGGCTA
CCTCAAGGCAGTGGAGATATTGGGGGCGTCGGGATTGGTCCACGAGGCCC
TGAGCGAGCTCGAGGGTATGCTCGAGGAGGAGGTGGCGGCCGACCATCGC
ATCTTCTTCTCCTTGATACGAAACGCCCTCCTCCACAACCATCTCCCCGT
GGCTGCGCGCACCGCCGTGCTGATGGATACGGAGGGCTGCACTCCCCCAG
CCTCCTCCCTCAAGCTCTTAATGGAATCGTTAATTAAAGCTGGATTAGCC
GCCCGAGGACTGGAGCTGTTGGACACCGTCGGTCCGGCGTCCTTCTCAGG
CATGTCGATCAAGGTCTGGTTCAATCTCCGCCTCCGCCTCTGCCTGAGCT
GTCGGGACAAGGAGGGCGCCTTCAAGGAGCTGGAGCAGATGCAGAACCAG
GGCATCGAGCTCAACGACTCCCGCACCGTCTCCCTCGCCCTCCGCCTCTT
CACCCCCTCCCGCCCGCCCTCCCTCCCTCCCTCCCGCCCCTCCTCCTGCT
CCCTCCTCCGCCTCTTCCTCCTCCTCCGCGCCGTCTCCGCCCCCCTCGAT
ACGGTGGCCTATACCACCGCCATCGCCCACGCCACCGACAGCACCGAAGC
CTACGCCCTCCTCGCCCTCATGGACCAGCCCCCGCCCTCCCCCCCGCCCT
CCCCAAATGACGTGACCTACACAGCCCTCATCCATCACCTGGTCCGAGAG
GGTGACTTCCAGGCAGGGAAGGACATCCTCTTCTCCATGAAGGCCAAGGG
GATACCCCCCTCCTCCGTCACCATATGCGCCATTCTTAACGCCTACCTCA
AGCAAAATCGGGCACAGGAGGCGCTGACCTTCTTTCACACCGTCTTTCCT
TCCTTCCCCCCTTCCTCCCCCCTCTCCTCCCCCCCTCCCTCCCCTCCCGT
CCACGACCTGGGCGTCGAGCTGGACCTGAAGCTGCAGACCACCTACCTCT
CCCTCCTCCTCGCCCTCCGTCGGCCCCTCTCCGAGATCCAAGCCTACGTC
CAGGCCGTGGAGAGCAGGGAGGGAGGGAGGGAGGGGTGGAGGGAGGGAGG
AGGGAAAATATACGCGCTGTGGGCCAAGGCCTGTATGGCCGCTCGGGAAT
GGAAAGCGGCCGTGCGGTTGATCAAGCGCGGGCACACCCAGGGCGTGGAT
TTGGACAATCGCTTCTACACCGTCTTGCTCGACGGGCTGGCGCAGGCCGG
CCAAAGCAGCCAGGCCATGCATGTCTTTAAGGAGATGCAGAGCAAGGGAA
TCACGCCTAATGCCTACGCCTATGCCGCTCTTCTCAAAGCCTTCACCTCC
TCCTCCTTCTCCTCTTCTTCATCTTCTGCCGCTCGCGCGGCGCGCAGGAG
AGGGAAAGAGGTCGAGGAGGGCGAGGGCGAGGAGGGCGAGGAGGGAGGGA
GGGGAGGAGGAGGGGCGGGGAGGAGGTTGAGGGAATACATTGAGTTATTC
GACGCGGCCGAGGCCGAGGGACGGCTGACTCCCAGTGTCATCAATTATAA
CGCCCTCATCGACGCCTGTGGCAAAATCCAAGACCCCGCTGGCGCCGCCT
CCTTCTTCCAGCGACTGCAGGCCTCCCCCTCCCTTCGCCCCGACGTAGTG
TCCTGCCGCAGAAGGAGGAGGAGGAGGAGGAGGAGGAGGAGGGAGGGAGG
GAGGGGGGGGGCAGGTGGTGTGTGGCCGACGGATCGGACGTTTAATCCGT
TAATAGACCGATGCGCACGAGCAGGCCGAGACGAGCTGGTGGAGGAGGCC
TTGGCCCTGATGAGGCAATACAGCACTCGTCCTCCGGACGTCATCACCTA
CAACTCCCTCCTCACCGCCGAGCTGCTCCGCGGGGGGGGTCCACAAGGCG
TGCTGGCGAGGATGAAGGAGGGCCGGGTGAAGCCCAACACCATCACCTAC
AACATACTGCTCGATCATTATTCGCGCGCCGGCGACTGGTCCAAGGCCTT
CGCGGCCCTCGAGGAGATGAAACAGGCCTCCCTCGCCCCTGACGTGCAGA
CTTACAACCACCTCCTCGACGGTCTCTCTCGAGCCGGGAAGTTTATAGAA
GCCGAAACCCTCTTCAAGAGGATGATGGGGGAGGACGAGGGGGAGGGAGG
GAAGGAAGGAGGGGTAGGCATGGATTCCTTCACGGCCTTAGTCATGCTGA
CGATGTACGGAAAGCAAGGAGATCTGCATAAGGTCGATGCGTTGGCGACC
CGCCTCTTTCCCTCGATGCCGTCTGCTGAGGAGGAGGAAGAGAGGGAGGG
TGAGGGGTCACCGAAGAGCAAAACCCCGCCGGGAGGAGGGAAGGACGCGA
GAAGACGAGGGAGAGGAAGAGGAGGAGGAGGAGGAGGAGGAGGAGAAGGA
GGAGGAGGAGGAGGAGGAGGAGGTCGGTCGAGGGCAGCGTCGCCGGCCGT
GGCGGCCAAGTTGGTCGGTATCTACCTGCAGCACCAACAAGCCGGCCAGG
TTGTCTCGCTTCTCTCCTCCGTTCACTCCTCTCGCCTCTTTCCTATCCAG
CCGTCCTGGATATCCTCCCTCGTCCTCCACTCCCTCCTCCGTTCCCGCCC
TCAAGAAGCCTTCCGAGTGTTGGAGCTTGCGCGATTTTCGTGGGGGGTAC
GTCTGAGTGGGAAGACGTATGCCGCCCTGGCACGTGCAGTCCTGGAAGGG
GGGGAAGGGAGGGAGGGAGGGAGGGAGGCCGTGCAGGCGGTGGAGCTGCT
GTTGCTGGAGGGTCGGAGGAAGAGGGAGGTGGCGCTGTGTAAGGATTTGG
GGCTAGTGTTAGTACAGATGGTGAAGGCGGGAAGGAGGGTGAGGAGGAGG
GAGGAGGGAGGGAGGGAGGGGGAGGTGAAGGAGGTGATTGAGGAAATGGT
GGTGAAGAGGGTCGTGGGTAGGGAGGAGGCGGATGAGTGGCTGAGGGATA
TGGAGGAGGAGGAGGAGGAAGAGGAGGAAGGAAGAGGGAGGGAGGAAGGG
GGAGAGAGGGAGGAGAATAGGATAGCATAG back to top
|