NO01G05220.1, NO01G05220.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO01G05220.1
Unique NameNO01G05220.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length9023
Alignment locationchr1:1385917..1395202 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1385917..1395202 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO01G05220.1 vs.
Match: EWM29446.1 (non-ribosomal peptide synthase [Nannochloropsis gaditana])

HSP 1 Score: 1136.7 bits (2939), Expect = 0.000e+0
Identity = 577/896 (64.40%), Postives = 685/896 (76.45%), Query Frame = 0
Query:   53 QARRVPCILPELWVTDPRLKQHRGVLDEVMARVHDWADLFDMHPPETLNEVFQVSVEANQKRSVEPDMWAPVPDIMKALRETAERMGDEVFATWVDAGDKINRHWTFRQTWEAAGAVAHALVTEWGVKPGDRVMLCYNFSYEYFPAFLGCLRAGAVACPVYPIDPSKMEIALNKFKHVVEDTGARLVLTDKLINRVRIGCSMFYSHLMPQTVEWKVTDHLVQ-PTYTSTFPAPSYDHPNRKPTDIAFLQYTSGSTGDPKGVMISYGNLGANVGLISGAQNFAFSYADLFPLTYEKHDEAWYKRPRSVSWLPMYHDMGLVYGVVTPFYMGARMHYMSPITFLKDPCSWIRLLAKEKATWAAGPDFAYRLCAKKWDASKWTTDDYTLTYMIYMHTGAEPIRPTTMEDFNRVFRPYHLHARALSPCYGLAESVVCVSWFDPVANPPETMISKGERPGYVCCAADWRVDLRIVDPETREEAEEGVAGELWVSGPSVALGYWNKPEWSEKAFRARLTKAAPAETRPWGRFGNGKYLRTGDMAFMQDGRIYYSGRLKDMMIVRGQNYYAQDIEFPAQDAWGAIRGGCLAAFSMDVEREEEEQLFIVFELAPGRYSTEVFRENMERVARMVKTKVGLDVYRMIAVKDRTIPKTTSGKIRRRATKEAMIMGRLWVLHDSLGLLPLGKGKGTATAAAAAAAAARASSSMSGMPTLERSVSSSYLAGVGESIGGILGSLYDALADPLGAYAGLDTDLIAGTLGRASSEGVVTMTTLTVVPREELREGGGEGGEGGGQRETIMMVGMGEGGGSAHDHKARPSEWSTYRGASGAGGALMSPVIRSLPPSSSSSSSLTSVTLQQQQQQQQQKPTLSSSLGCTSFNSSPSLTSFFSSAKAAATGLRKGQP 948
            Q R++PC LPELW  DP+L  H+ VL++VMA V+DWADLFDM P ETLN+ FQ+SVE N+KRS+ PD+WAPVPDIM ALR TAE MGDEVFATW++AG K  RHW+FR TWEAAGAVAHALV +WGV+PGDRVMLCYNFS+EYFPAFLGCLRAGAVACPVYPIDP KMEIAL KFK VVEDTGARLVLTD LIN +RIGC +FYSHLMP+ +EW+VTD LVQ P  +   P PSYD+P+R P+DIAFLQYTSGSTGDPKGVMI+Y NLGANVGLI+GAQ FAFSYADL P+ +   D +W+ R RSVSWLPMYHDMGLVYGVV PF+MGARMHY+SPITFLKDPC WIRLLAK+KATWAAGPDFAYRLC+KKWDA KW  D+Y+LT++IYMHTGAEPI+ TT+ DFNRVFRPY LHARALSPCYGLAESVVCVSWFDPVANPP ++I+ G++PGYVCCAAD+RVDLRIVDP+T EE ++G AGELWVSGPSVALGYWN+P  ++ AFRARL++AAP E RPW RFGNG+YLRTGD+AFMQDGR+Y+SGRLKDMMI+ G+ YYAQDIEFPAQDAW A+RGGC+AAFSM  E ++EE+L +VFE+AP RYS   FRE++  V + V+ K GL V+R IAV+DRTIPKTTSGKIRRRATKEA+  G LWVL+DSL LL  GKG+G  T   A    A AS   S  P L+RS S  YL+ + ESIG I   L++ALA+ +GAY GLDT+LI G+L R  S     +        +E R+G G+ G    Q  +    GM +   S+ D   R        G +GAG  ++      LP  S +SS       +  +  ++            ++   P+L+   S    AA+ LRK QP
Sbjct:   11 QLRKIPCTLPELWSNDPQLADHQDVLEDVMAEVYDWADLFDM-PLETLNKCFQISVEENRKRSMHPDLWAPVPDIMDALRRTAEDMGDEVFATWIEAGGKETRHWSFRDTWEAAGAVAHALVHDWGVQPGDRVMLCYNFSFEYFPAFLGCLRAGAVACPVYPIDPGKMEIALKKFKLVVEDTGARLVLTDNLINWIRIGCGLFYSHLMPKGLEWRVTDQLVQRPPSSHPLPPPSYDYPDRAPSDIAFLQYTSGSTGDPKGVMITYANLGANVGLIAGAQRFAFSYADLIPVMHVNGDRSWFTRSRSVSWLPMYHDMGLVYGVVAPFFMGARMHYLSPITFLKDPCLWIRLLAKKKATWAAGPDFAYRLCSKKWDAKKWPVDEYSLTHIIYMHTGAEPIQSTTLVDFNRVFRPYRLHARALSPCYGLAESVVCVSWFDPVANPPGSLIAGGDKPGYVCCAADFRVDLRIVDPDTCEEMQDGTAGELWVSGPSVALGYWNQPALTKTAFRARLSRAAPLEARPWARFGNGEYLRTGDVAFMQDGRLYFSGRLKDMMIIHGKRYYAQDIEFPAQDAWSAVRGGCIAAFSMLAEGKDEEELHLVFEVAPARYSQHAFREHVNEVVQAVRKKTGLTVFRAIAVRDRTIPKTTSGKIRRRATKEALRTGHLWVLYDSLCLLSPGKGRGATTLERAETVCA-ASLPRSYRPLLKRSTSMGYLSSMAESIGEIWDCLFNALAEHVGAYVGLDTELIMGSLRRNISGSSEQL--------DEKRKGEGKDGAVRKQDGS----GMIDNEPSSKDRMVR-------CGPTGAGEIVVPTSPCHLPSGSFTSSWQEQEYCKAAKLSEKGPVDRPEPCKQVTYLPFPALSLVSSWINGAASDLRKEQP 885          
The following BLAST results are available for this feature:
BLAST of NO01G05220.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM29446.10.000e+064.40non-ribosomal peptide synthase [Nannochloropsis ga... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G05220NO01G05220Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO01G05220.1NO01G05220.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO01G05220.1.cds1NO01G05220.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G05220.1.cds2NO01G05220.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO01G05220.1 ID=NO01G05220.1|Name=NO01G05220.1|organism=Nannochloropsis oceanica|type=mRNA|length=9023bp
AGAAGTAAGAACTAACTAATACACTGACGCATTTGTTAGTCGATTGACTG
TCTGACTGAGAAAAAGGCAAAGGAGGGCCGGAGCAAGACCAAGCTAAAGC
GATGCGTGCATGTGGGTTGGAGGGATGTTCTATTGTATGAAGAGTGTGAG
TGCCGCAAACGAGCCCTCGCAAAGTCAATGAAAACCGAAACATGCTTGTC
ACTTCCTCTGCGTGGCATCTTTGAATAGGGTTGCGATTTCCAAGTTGTCC
GTCACATAAGACGACTCGTCCATCTCACTAGTTGCAGTGTTCAACGGATC
TAACTTCTGAGGCATCTGGCGCCCATGCTTTGCCCTCTGATTTGGTGGCT
GGATGAAGCTTTGAATGCGCTTTGTGTGTCAAGGCATAACTTACACTCTC
ACTTTTCCTTTCCATTTTTTTGCCAAGCCACATCGAGGAGGCCTGCTTGT
TTCTCAGGCTGTCCTGTTTGTGTTTTGGGGGGTTCCCGTGTGGACACTCG
CTCCTCTTCATCGCCAAATCATATTTTCGACCTGTGCTCCCTGCACCATC
CTCCGAAAACGCCACTTCGACTGTCTTGAACGAGCAGTGTATCAGCTGCT
AAGGCTGTAACCCGTGCTAACTCTAATACAGGAGGAGCCACCGGACCTGT
CTGCTGCCTCATTCACTCGCTCATGTCCTCCTTTATCCTCTATCCCTCCT
CTTCCACTCTTGACACGAACACACAGACCAAGGGGAGGGTGACCAAGATT
ACAAAGCAAGGCAAAGCGCAGGAAGCACACGCACATCGTCCCTGCCACCG
GGAAGAAAAAATCATCTCTGCCGCAAGGCATTTATTGCCTCGACCACCAC
CATGACCAGCACGCCGGAAAAGCGAAGACCCACCGAGGGCGGCGGCAACG
GTGGCACCGGTATTGGCGGGCCAGCGATAGAAATGCAAGGCCCACCGTCG
CCTCCTAAGGGCTCTCGACGAGAGTCGAGTGCTCCGCCCGCACACTCGGC
GCCTGGCCAAGCTCGACGGGTACCATGTATCCTCCCTGAGTTGTGGGTGA
CGGATCCGCGGTTGAAGCAGCATCGGGGCGTGCTTGACGAGGTTATGGCC
CGCGTGCATGACTGGGCCGATTTGTTTGACATGCACCCTCCCGAGACGCT
CAACGAGGTCTTCCAAGTCTCAGTGGAGGCCAACCAGAAAAGGTCTGTCG
AGCCAGATATGTGGGCGCCTGTTCCTGATATCATGAAGGCATTGCGAGAG
ACGGCAGAAAGGATGGGAGACGAGGTGTTCGCAACTTGGGTGGACGCAGG
GGATAAGATAAATAGACATTGGACGTTTCGACAGACCTGGGAAGCTGCTG
GAGCGGTGGCACATGCGTTGGTCACTGAGTGGGGCGTCAAGCCGGGGGAT
AGGGTCATGTTGTGCTATAATTTTAGCTATGAATACTTCCCTGCCTTCCT
GGGGTGTTTGAGGGCGGGGGCGGTGGCGTGCCCTGTGTATCCGATAGACC
CGAGTAAGATGGAGATTGCCTTGAACAAGTTTAAGCACGTGGTGGAGGAC
ACGGGGGCTAGGTTGGTGTTGACTGACAAGCTCATCAATAGGGTCCGGAT
TGGGTGCAGCATGTTTTATTCGCACTTGATGCCTCAGACGGTCGAGTGGA
AGGTGACCGATCACCTTGTCCAACCCACCTACACCTCGACCTTCCCCGCC
CCCTCCTACGACCACCCCAACCGCAAGCCCACCGACATCGCCTTCCTTCA
GTATACGAGCGGGTCGACTGGCGATCCCAAGGGCGTCATGATCAGCTATG
GCAACCTCGGAGCCAACGTCGGTCTCATCTCCGGCGCACAGAACTTCGCC
TTCTCCTACGCCGATCTCTTCCCCCTCACGTACGAGAAGCATGACGAAGC
TTGGTACAAAAGGCCCCGGTCCGTGTCATGGCTCCCGATGTATCACGACA
TGGGACTGGTGTATGGCGTGGTGACCCCATTCTACATGGGCGCGCGGATG
CATTACATGAGTCCAATCACGTTTTTGAAGGACCCGTGTTCCTGGATTCG
CTTGTTGGCCAAGGAGAAGGCGACATGGGCGGCCGGACCTGATTTTGCCT
ACCGGTTGTGTGCGAAGAAATGGGACGCGAGTAAATGGACGACAGATGAC
TACACGTTGACGTACATGATTTACATGCACACGGGCGCCGAGCCGATTCG
ACCGACGACGATGGAGGATTTCAATCGGGTGTTTCGGCCGTACCATCTGC
ACGCGCGGGCCTTGTCGCCTTGTTATGGCCTGGCGGAGAGCGTGGTGTGT
GTGTCATGGTTTGATCCGGTGGCAAATCCACCGGAGACGATGATCTCGAA
GGGGGAGAGACCGGGATATGTGTGTTGTGCGGCTGATTGGAGGGTGGACT
TGCGGATTGTCGACCCGGAGACACGCGAGGAAGCGGAGGAGGGCGTGGCG
GGTGAGTTGTGGGTGTCGGGCCCGTCGGTGGCGTTGGGGTACTGGAACAA
GCCGGAATGGAGCGAGAAGGCTTTCCGGGCGAGGCTTACTAAGGCGGCGC
CAGCAGAGACGAGGCCCTGGGGAAGGTTTGGGAATGGGAAATATTTGCGC
ACTGGTGACATGGCGTTTATGCAAGATGGACGGATTTATTACTCGGGGCG
GTTGAAGGACATGATGATTGTGAGGGGGCAGAACTACTATGCGCAGGACA
TTGAGTTCCCGGCGCAGGATGCGTGGGGGGCGATTCGGGGGGGCTGTCTG
GCAGCGTTCTCGATGGATGTGGAGAGGGAGGAAGAAGAGCAGTTGTTTAT
CGTGTTTGAGCTGGCCCCGGGTCGCTATAGCACGGAGGTTTTCCGAGAGA
ATATGGAGAGGGTGGCGAGGATGGTGAAGACAAAGGTGGGCTTGGATGTC
TATAGGATGATTGCGGTGAAGGACAGGACGATCCCCAAGACGACCTCGGG
GAAAATTCGTCGGAGGGCCACGAAGGAGGCCATGATCATGGGAAGGCTCT
GGGTGCTGCATGACTCCCTGGGACTGTTGCCATTGGGAAAGGGGAAGGGT
ACGGCGACTGCAGCAGCAGCAGCAGCGGCGGCGGCAAGGGCATCGTCGTC
GATGAGCGGAATGCCGACGCTGGAGAGGTCGGTGTCGTCGTCCTACCTGG
CCGGTGTGGGGGAATCGATTGGGGGGATTTTGGGAAGTTTGTATGATGCA
CTCGCCGACCCACTGGGGGCATATGCAGGGTTGGACACAGATTTGATTGC
CGGGACGTTGGGGAGGGCATCGAGTGAGGGGGTTGTGACCATGACGACGT
TGACGGTGGTCCCGAGGGAGGAGCTGAGGGAGGGAGGGGGAGAAGGGGGA
GAGGGAGGGGGACAGAGGGAGACGATCATGATGGTGGGGATGGGGGAAGG
GGGAGGCTCTGCACATGATCATAAGGCTCGACCGAGCGAATGGTCGACGT
ATAGAGGGGCGAGTGGCGCGGGGGGTGCGTTGATGTCTCCAGTCATTCGC
TCTCTCCCTCCCTCTTCGTCGTCCTCCTCCTCCTTGACCTCAGTCACACT
GCAACAACAGCAGCAGCAACAACAGCAAAAGCCGACACTTTCATCCTCAC
TGGGCTGTACATCCTTCAATTCTTCCCCTTCCCTCACCTCCTTCTTCTCC
TCCGCCAAGGCTGCCGCTACTGGCTTGCGGAAAGGGCAACCACAGCATCA
GCAACATCAGTCAAGAAGCAGCAGCACCCTCCGCGATGAGATCACTACCC
ACACTAGCGGGAGAAGCAGTCTCATCGGGCCAATACCGAACCTAGGACTC
CCGTCATCAGCACCAGCTGCAGTAGCAACGGCAGGGGCGAGCGCGGGTGC
TGGAGGGGAAGCAACGTTGCCCCCTGCTTTCCCCCTTTCCCCTCCTTACA
CCTCGACCTCGGCCTCGGCCCTCAGTCCGGAACAGCTGGGCAAGCTCTCC
TGGCGACAGCGAGAGGCAGCATTGGTAGAAACAATTGTGGAGATATGTGG
TTCGGTGGGTTTGGGAAAGAAGGAGGGGAATGAGCTGTCGGGTGAGACGG
ACATGATGTCATTAGGCTTGAGTTCGATTAAGGCTGCGGAACTGATTGGT
GCGATTGAGGCGCGATTTTGGCGAGGAGGGATGGGAGAGGAAATGGGAGG
AAGGGAGGGAGGACTGTCGGAGGTAATAATGTTCGAGTGTGCGACTTTGC
AGGATGTGGCTCAGCAGATTAATCGACGCCTTTTCAAGGGCAGAAAGGAG
GGGGAAAGAGAAGGAGTAGCCGCGCTGGTGCAGCGAGGGGGATCCTGTAT
TATGGGGGCGACGGGGCAAGTGCTGGCGATGGGTGTGACGGGAGCCTTAT
TCACCGTCTCGGTCCTGTTACCGCTCCAGCTTTGTCAGCTGTTCCTATCC
TCCCCGGCAGTGGCAGGTGTGAATTACCCCTGGCTGCTATCCGCGCTGCT
GCTCCTCCCCGCAGCCTACCTCCTCTTTCTCTTCTGTTTGATGGCATCGT
TGACTTTGACTAAGTGGGCGGTGATGCAGGGTAGGTATCAAGAAGGGACC
TACTCGACCAGCAGCTTCTACTACATGCGGTGGGCCTTTACGAACAACCT
CATGTCTTTCGCCCGTCGGAATTTCGTGGGCGTCTTGAAAGGCACTCCTA
TTTATACTTGGTGGCTGCAAAGCATGGGCCTCCGTCTTGCTGCAGGAGCT
GTCGGCTTGCATCTTCCTCGTCTTTATTCTGATGACATAACAGAATTTGA
TTTGGTTCACATCGGGGCGGGGGCTGTGGTGGGGGAGCAAGCACGGGTGC
GAGGGGCGGTGGTGGAAGGCGGGTACCTGCACCTTCGTCCTGTCATTATT
GGAGATCACGCGGTAATAGGCTCGCAGAGCACCCTTCTACCGGGTGCGAT
GTTGGGGAAAGGTGCGGAGCTTGCGCCTGCTTCTGTCCTATCAGGGCGTT
CACCAGAGTTGCCGCCTTTCACAATGTGGGAGGGCTCGCCTGTCAAGATG
GTGCGTCCACTGCCCGTCCCCAAGGAAGCAGCAGGAGCAGTGGCAGCCAA
CCGCAGTTGGCACAGGCCGCTGGATTCGATCATGACGAATGTTTTGGTTC
CTTGCTTGGCGGTGTACAGCGCGGGGGCGTGCTTGGTCTTGGCTTCCTTT
CCTGCCATGATCCTGCTGGGTGTTCTCCTCCTGGCTACCTCGACAGGGGT
AGGCACCGGCGCCGTAGAAGCTGGCAGAAGCAGCGTCACGTGGAGCGATC
TGATGGCTTTGAAAGATTACTCGTGGGCCTTAATCATCGCTCCTATGGTC
GCGACCTTTGGCCCTCTCACCCTGCCCTTCTTTGCCGTTATGACAGGCTT
GGCTGGGGAGTCACTAGCCGCGCCCTTGGCGTCAACAGGGGTGGAGAGCA
CCACCTCTTTCTTAGCGTTGGCCCGTCTGGCTGCCTCGGAATATTACGTG
GTGGGAGTGGGAGTCGGAGTGGGCCTGGCTTACCTCTTGTTTGGTCTCGC
ACTTGTCATGGCGGCGGCCGTCGTCCAGTACGTGACGGGCATGCTGCTCA
TCCTCATCTTTGACAACGGCATCCGCAGTAACAGCAGCAACCGCAACAGC
AGCACCATTAAAACCAGGGCCCGCCAGTGGTTGGTAGACTACCGAGAGCT
GTTCCAAGCTGTGCTCTATATGCGATTCCCGGTCTTTCTGGGAGGGTCAA
TCGGATACAATCTCTACCTGCTCGCCTTGGGCGCGAATGTGCACCTCGAC
GCCTTTGTCGCTTCCGAGCATGTGATCAAGAATCCTTCCGCCCTTGTCAT
TGGTGCTGGCGCGTTTATCCACCCCTCGGCGCTTTTGCACACCAGCCTAG
CCGGCGGGAACACCAGCAACAACAGCAAGATTTTTATTGGACAAGGCGCA
CTTGTGGGACCCAGTGCTGTGGTCGGTACGCTAGGCACGCTTGAAGACGC
TTCCACCCTTGCCCCTCTCACCTATCTTCCGGCAGGCAAGCGTGTACATA
CTGACACGACCAAGTGTGGGTATGCCACCCTCCTCCGTCTCAAGCAGCCC
GCGCCCTTTCTCGGGAGAATCACCTCCATCCTGGCGAAAATAGGGTGGGC
TACCTTCACCTTCAACTACTCCTGGATGGCGGTCGTGCTTTACATCGCGT
TGGTATACGTAGCGTCCTACCCTTCCTTCGTTATCGTACAGCTCGCCTTG
GACTATACCGCCTCCTCCTCTTTCTCCTCCATCACCAATGGCGGGGTCTG
GCTTCCCGGCTTGCTGATGGCCGCGCTCTTCCCCCTCTTCGGTCTCTGTC
TTCTCGCCTCGGCCGTCCTACTTAAGCGCCTGGCCCACCCTGGTTATCTC
CCCAGCAAGCACCACGCTCTCGGTGGCTCCTTCTATTACCGGCACTTGTT
TGTGACGGGATATCTCAAATTAATCGACCGGACATTTGCCTGCCTCTTGT
ATGGCAGCCGACTTTACAATTTTTACCTCTCACTTCTAGGTTTGTCGGTT
GGGAGGGACTCTATTATCATGACTGGTAACGTGCTGGAGGGCGTTGACCT
CCTTTCCATCGGAGACAAGACTGTAATCAATCGAGACGTGCAGATAAGTG
CTGTCAAGCTTAACCCCTCCTCCACCCTCCGTCCCTCCCTTCTGTTGGAA
GTGGCGTCTGTGCGGATCGGGCATGAATGCACCCTGGGGGATGCGACTGT
TGCAATGGCAACGAGTGAGATGAAGGACCTCGGTGTGAGTGCGGGGGGTA
CGTTGATGACCCCTGAGATCGTGTGTGGGCGCCGAGTGATGGTGGAGGGG
AATCTGCCTTATCGTGTGGCACGTGGTGCGTCGGAGGCCTGCGTGAGCGA
GGGCAGCAGTAGCAATCTGCTCACGCCTTCTGGACCCTTCAATGCCCCTT
TGGAGCTTATTATCCCTGATTGTGACTTAAATCACGAATGTGTCTTCTTC
CAAAACCTCGCCGCTGTCGCTCCTGCTTCCTCCCCCCCCCCCCCATTCCT
AGCACAGCTTCCCTACTCCCGCCCACAGTGCTGGTTACGGGCGCCAATGG
CTTTGTCGGCCGACATGTGGTGATAGAACTACTGCAACGAGGTTTGCACG
TTGTCTGCCTCGTCCGCAGGCGGGGGCACACCCTTGCCACAGACAGCCGC
TCGCGGATGCTTGCTTCTCTGCAGGCGGCAAAGCTCACACTGACAGCTGA
GCAAAGCTTGCGGTTGCGTGTGGTGGATGGAGATGTGAGTCGGCCTTTGT
TGGGGCTAACCAGGGTGTTATATGAGCAGCTGGCGGAGGAGGTGAGTGTG
ATTTTCCATTCTGCGGCCATGCTTGGATTTGCGGCGCCGTATTCGAATTT
GAGGGAGACGAATGTGTTGGGGACAAAGCGTGCATTGGAGTTTGCAGTGT
GTAGGAGGGTGAAGCGATTTAACCACGTCTCTTCCTTGCTGGCGACGAGC
TTAGATATGACTAACTCAATGGGGAGGATCACGGAGGTATCGCCGTTGGG
GAATGCGACGGTTTTCCCAGTTTTGGGGGCGAGTGAATGGACGCATGGGT
ATGGGATGACGAAGTGGGCACAGGAGAAGCTGGTTCTCCAGGCGTTTGAG
GCGGGGGTGTTGGGAACCATTGGGAGGTTGGGTGAGGTGGGTCCACATTC
ATTGACGGGGTGCATGGAGGAGGGGGTACTTGTGGATTTGGTGAAGGAGA
CATTGGAAAAGGGAGTGGTGCCGATGATACTTGGACGAGTGAATGTCACG
CCGGTAGACTATTGCGCGCGGGGGCTGGTGAGGGTTGGAATGGAGGGTTG
GGGCCTCGGGAGAACATACCACTTGATGGATCCGAACTTTGACTGTGGGG
CAGACACGCTGGTGAGGTTGGTGGAAGATTTGGGGTATATGAATAGCGAC
AGCAGCAGTAGTAGCAGCAGTAATAGCAGCAGCAATAGTAGCAGCAGCAC
CAGCAATAGCAGTGCTAGTGCGGCGCGGTGTGATTTTCTTTCATGGCGGG
CGAAGATGAAGAAGGAGGGGGCTAGGAGGTCATGGTTTGTAGCTGGGATC
CTGTCGGGGGAGCAGCAGCTAGTGGGACAGAATGTGGACGCGACAGAGGG
AGGGGCAATCATATCGCGGGAGGAAGCAGGGAAGGAGGTGGGGATGAATG
GGGCGATATTGTTGAGAAGGTTTGCGAACTACAAAGGCTGGAAGAAGGAG
AGGGAGATGGTGGACGTGCGGGTGGTGGTATCGCCGTCGTGAGGTTTGGA
AGACGGGAGAGAAGGAGGGGGGGATGGATGGAAATAGATATTGATGGAGC
AATAAAGAAAAAGCAAGAACAGCGGGTACATCGAGTAAACGTAGGGAATA
GGGATGAGATAGGGAGCGACAATAGGGCAAGATCTGTGAGTAGCTAGCAC
ACATCTGATAGGAGTGGTACTTGGAGGGAAAGAAGAGTCTGAAAAGCAGA
AGGGAAAAAGAGGAAAGGAGAGAGAAAGAGAAATCTGCCAAACGTGGAGA
TCTCACTCATTGCCTACAGCGTCCACCGAGGCAGAAGGTTCGGTATGAAG
AGTCCGAGTCCAATCAGTCGATAGATCCATTTATTTTCATTTCTCCGCGT
CCCGGTACGGCAACTAAATACGAAGACGTACATACATTGAATTATTGTCT
TCGTGCGACGGTTGGAAGTGAAAGTGTCACACATGCTCGGACACCTTTCT
CCTTTCCCGCCTGAGGGGGGTGGTGAGGGTAGAGAAGGAGCAAGACGAGA
GTTTCTAGCAACGGAAAGCACCACAAATTAATATATGAGATAAAACGCAA
AACGGTAAACATGTAAGCGAACAGCAGGAACATTCGCATACATGGACAAG
AATCAAGGGTGAAAAATTGAGTCAAGCAAATTAAACAAACCTACCTGGAT
AACGAAGACAGAGAAAAAATTCAGCAGCAGCAGCAGCAGCAGCAGCAATC
CTTAATTAAATTCGAGAGCAAGAGCAGGAATAAGATAGCCGAACTATCAC
AAAAAGAAAGTAAGAGAACGAAA
back to top

protein sequence of NO01G05220.1

>NO01G05220.1-protein ID=NO01G05220.1-protein|Name=NO01G05220.1|organism=Nannochloropsis oceanica|type=polypeptide|length=2074bp
MTSTPEKRRPTEGGGNGGTGIGGPAIEMQGPPSPPKGSRRESSAPPAHSA
PGQARRVPCILPELWVTDPRLKQHRGVLDEVMARVHDWADLFDMHPPETL
NEVFQVSVEANQKRSVEPDMWAPVPDIMKALRETAERMGDEVFATWVDAG
DKINRHWTFRQTWEAAGAVAHALVTEWGVKPGDRVMLCYNFSYEYFPAFL
GCLRAGAVACPVYPIDPSKMEIALNKFKHVVEDTGARLVLTDKLINRVRI
GCSMFYSHLMPQTVEWKVTDHLVQPTYTSTFPAPSYDHPNRKPTDIAFLQ
YTSGSTGDPKGVMISYGNLGANVGLISGAQNFAFSYADLFPLTYEKHDEA
WYKRPRSVSWLPMYHDMGLVYGVVTPFYMGARMHYMSPITFLKDPCSWIR
LLAKEKATWAAGPDFAYRLCAKKWDASKWTTDDYTLTYMIYMHTGAEPIR
PTTMEDFNRVFRPYHLHARALSPCYGLAESVVCVSWFDPVANPPETMISK
GERPGYVCCAADWRVDLRIVDPETREEAEEGVAGELWVSGPSVALGYWNK
PEWSEKAFRARLTKAAPAETRPWGRFGNGKYLRTGDMAFMQDGRIYYSGR
LKDMMIVRGQNYYAQDIEFPAQDAWGAIRGGCLAAFSMDVEREEEEQLFI
VFELAPGRYSTEVFRENMERVARMVKTKVGLDVYRMIAVKDRTIPKTTSG
KIRRRATKEAMIMGRLWVLHDSLGLLPLGKGKGTATAAAAAAAAARASSS
MSGMPTLERSVSSSYLAGVGESIGGILGSLYDALADPLGAYAGLDTDLIA
GTLGRASSEGVVTMTTLTVVPREELREGGGEGGEGGGQRETIMMVGMGEG
GGSAHDHKARPSEWSTYRGASGAGGALMSPVIRSLPPSSSSSSSLTSVTL
QQQQQQQQQKPTLSSSLGCTSFNSSPSLTSFFSSAKAAATGLRKGQPQHQ
QHQSRSSSTLRDEITTHTSGRSSLIGPIPNLGLPSSAPAAVATAGASAGA
GGEATLPPAFPLSPPYTSTSASALSPEQLGKLSWRQREAALVETIVEICG
SVGLGKKEGNELSGETDMMSLGLSSIKAAELIGAIEARFWRGGMGEEMGG
REGGLSEVIMFECATLQDVAQQINRRLFKGRKEGEREGVAALVQRGGSCI
MGATGQVLAMGVTGALFTVSVLLPLQLCQLFLSSPAVAGVNYPWLLSALL
LLPAAYLLFLFCLMASLTLTKWAVMQGRYQEGTYSTSSFYYMRWAFTNNL
MSFARRNFVGVLKGTPIYTWWLQSMGLRLAAGAVGLHLPRLYSDDITEFD
LVHIGAGAVVGEQARVRGAVVEGGYLHLRPVIIGDHAVIGSQSTLLPGAM
LGKGAELAPASVLSGRSPELPPFTMWEGSPVKMVRPLPVPKEAAGAVAAN
RSWHRPLDSIMTNVLVPCLAVYSAGACLVLASFPAMILLGVLLLATSTGV
GTGAVEAGRSSVTWSDLMALKDYSWALIIAPMVATFGPLTLPFFAVMTGL
AGESLAAPLASTGVESTTSFLALARLAASEYYVVGVGVGVGLAYLLFGLA
LVMAAAVVQYVTGMLLILIFDNGIRSNSSNRNSSTIKTRARQWLVDYREL
FQAVLYMRFPVFLGGSIGYNLYLLALGANVHLDAFVASEHVIKNPSALVI
GAGAFIHPSALLHTSLAGGNTSNNSKIFIGQGALVGPSAVVGTLGTLEDA
STLAPLTYLPAGKRVHTDTTKCGYATLLRLKQPAPFLGRITSILAKIGWA
TFTFNYSWMAVVLYIALVYVASYPSFVIVQLALDYTASSSFSSITNGGVW
LPGLLMAALFPLFGLCLLASAVLLKRLAHPGYLPSKHHALGGSFYYRHLF
VTGYLKLIDRTFACLLYGSRLYNFYLSLLGLSVGRDSIIMTGNVLEGVDL
LSIGDKTVINRDVQISAVKLNPSSTLRPSLLLEVASVRIGHECTLGDATV
AMATSEMKDLGVSAGGTLMTPEIVCGRRVMVEGNLPYRVARGASEACVSE
GSSSNLLTPSGPFNAPLELIIPDCDLNHECVFFQNLAAVAPASSPPPPFL
AQLPYSRPQCWLRAPMALSADMW*
back to top

mRNA from alignment at chr1:1385917..1395202-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO01G05220.1 ID=NO01G05220.1|Name=NO01G05220.1|organism=Nannochloropsis oceanica|type=mRNA|length=9286bp|location=Sequence derived from alignment at chr1:1385917..1395202- (Nannochloropsis oceanica)
AGAAGTAAGAACTAACTAATACACTGACGCATTTGTTAGTCGATTGACTG TCTGACTGAGAAAAAGGCAAAGGAGGGCCGGAGCAAGACCAAGCTAAAGC GATGCGTGCATGTGGGTTGGAGGGATGTTCTATTGTATGAAGAGTGTGAG TGCCGCAAACGAGCCCTCGCAAAGTCAATGAAAACCGAAACATGCTTGTC ACTTCCTCTGCGTGGCATCTTTGAATAGGGTTGCGATTTCCAAGTTGTCC GTCACATAAGACGACTCGTCCATCTCACTAGTTGCAGTGTTCAACGGATC TAACTTCTGAGGCATCTGGCGCCCATGCTTTGCCCTCTGATTTGGTGGCT GGATGAAGCTTTGAATGCGCTTTGTGTGTCAAGGCATAACTTACACTCTC ACTTTTCCTTTCCATTTTTTTGCCAAGCCACATCGAGGAGGCCTGCTTGT TTCTCAGGCTGTCCTGTTTGTGTTTTGGGGGGTTCCCGTGTGGACACTCG CTCCTCTTCATCGCCAAATCATATTTTCGACCTGTGCTCCCTGCACCATC CTCCGAAAACGCCACTTCGACTGTCTTGAACGAGCAGTGTATCAGCTGCT AAGGCTGTAACCCGTGCTAACTCTAATACAGGAGGAGCCACCGGACCTGT CTGCTGCCTCATTCACTCGCTCATGTCCTCCTTTATCCTCTATCCCTCCT CTTCCACTCTTGACACGAACACACAGACCAAGGGGAGGGTGACCAAGATT ACAAAGCAAGGCAAAGCGCAGGAAGCACACGCACATCGTCCCTGCCACCG GGAAGAAAAAATCATCTCTGCCGCAAGGCATTTATTGCCTCGACCACCAC CATGACCAGCACGCCGGAAAAGCGAAGACCCACCGAGGGCGGCGGCAACG GTGGCACCGGTATTGGCGGGCCAGCGATAGAAATGCAAGGCCCACCGTCG CCTCCTAAGGGCTCTCGACGAGAGTCGAGTGCTCCGCCCGCACACTCGGC GCCTGGCCAAGCTCGACGGGTACCATGTATCCTCCCTGAGTTGTGGGTGA CGGATCCGCGGTTGAAGCAGCATCGGGGCGTGCTTGACGAGGTTATGGCC CGCGTGCATGACTGGGCCGATTTGTTTGACATGGTACGTGCTGGGATAAG TAGAAGAAAGAAAGGAAGAGAGGGAGGGAGGGAATGAGAAAAGACAGCCA CGGAATCCATGCTGCTTGCCTTGGGTTTAGCAGGGGGGGAGGGAAGAGGG GGGGGTAACATTACCCCACTTTATTGGGCGGAGGGAAGGGAGAGAGGGTC CCTTCGTTTCTGCCTTTCCCGCGTTTCCATATGCGTATGAACTAAAGCCT CTTTTGACGCCACTTTTCCTCCCTTCCTCCCTCCAAACCATTACAGCACC CTCCCGAGACGCTCAACGAGGTCTTCCAAGTCTCAGTGGAGGCCAACCAG AAAAGGTCTGTCGAGCCAGATATGTGGGCGCCTGTTCCTGATATCATGAA GGCATTGCGAGAGACGGCAGAAAGGATGGGAGACGAGGTGTTCGCAACTT GGGTGGACGCAGGGGATAAGATAAATAGACATTGGACGTTTCGACAGACC TGGGAAGCTGCTGGAGCGGTGGCACATGCGTTGGTCACTGAGTGGGGCGT CAAGCCGGGGGATAGGGTCATGTTGTGCTATAATTTTAGCTATGAATACT TCCCTGCCTTCCTGGGGTGTTTGAGGGCGGGGGCGGTGGCGTGCCCTGTG TATCCGATAGACCCGAGTAAGATGGAGATTGCCTTGAACAAGTTTAAGCA CGTGGTGGAGGACACGGGGGCTAGGTTGGTGTTGACTGACAAGCTCATCA ATAGGGTCCGGATTGGGTGCAGCATGTTTTATTCGCACTTGATGCCTCAG ACGGTCGAGTGGAAGGTGACCGATCACCTTGTCCAACCCACCTACACCTC GACCTTCCCCGCCCCCTCCTACGACCACCCCAACCGCAAGCCCACCGACA TCGCCTTCCTTCAGTATACGAGCGGGTCGACTGGCGATCCCAAGGGCGTC ATGATCAGCTATGGCAACCTCGGAGCCAACGTCGGTCTCATCTCCGGCGC ACAGAACTTCGCCTTCTCCTACGCCGATCTCTTCCCCCTCACGTACGAGA AGCATGACGAAGCTTGGTACAAAAGGCCCCGGTCCGTGTCATGGCTCCCG ATGTATCACGACATGGGACTGGTGTATGGCGTGGTGACCCCATTCTACAT GGGCGCGCGGATGCATTACATGAGTCCAATCACGTTTTTGAAGGACCCGT GTTCCTGGATTCGCTTGTTGGCCAAGGAGAAGGCGACATGGGCGGCCGGA CCTGATTTTGCCTACCGGTTGTGTGCGAAGAAATGGGACGCGAGTAAATG GACGACAGATGACTACACGTTGACGTACATGATTTACATGCACACGGGCG CCGAGCCGATTCGACCGACGACGATGGAGGATTTCAATCGGGTGTTTCGG CCGTACCATCTGCACGCGCGGGCCTTGTCGCCTTGTTATGGCCTGGCGGA GAGCGTGGTGTGTGTGTCATGGTTTGATCCGGTGGCAAATCCACCGGAGA CGATGATCTCGAAGGGGGAGAGACCGGGATATGTGTGTTGTGCGGCTGAT TGGAGGGTGGACTTGCGGATTGTCGACCCGGAGACACGCGAGGAAGCGGA GGAGGGCGTGGCGGGTGAGTTGTGGGTGTCGGGCCCGTCGGTGGCGTTGG GGTACTGGAACAAGCCGGAATGGAGCGAGAAGGCTTTCCGGGCGAGGCTT ACTAAGGCGGCGCCAGCAGAGACGAGGCCCTGGGGAAGGTTTGGGAATGG GAAATATTTGCGCACTGGTGACATGGCGTTTATGCAAGATGGACGGATTT ATTACTCGGGGCGGTTGAAGGACATGATGATTGTGAGGGGGCAGAACTAC TATGCGCAGGACATTGAGTTCCCGGCGCAGGATGCGTGGGGGGCGATTCG GGGGGGCTGTCTGGCAGCGTTCTCGATGGATGTGGAGAGGGAGGAAGAAG AGCAGTTGTTTATCGTGTTTGAGCTGGCCCCGGGTCGCTATAGCACGGAG GTTTTCCGAGAGAATATGGAGAGGGTGGCGAGGATGGTGAAGACAAAGGT GGGCTTGGATGTCTATAGGATGATTGCGGTGAAGGACAGGACGATCCCCA AGACGACCTCGGGGAAAATTCGTCGGAGGGCCACGAAGGAGGCCATGATC ATGGGAAGGCTCTGGGTGCTGCATGACTCCCTGGGACTGTTGCCATTGGG AAAGGGGAAGGGTACGGCGACTGCAGCAGCAGCAGCAGCGGCGGCGGCAA GGGCATCGTCGTCGATGAGCGGAATGCCGACGCTGGAGAGGTCGGTGTCG TCGTCCTACCTGGCCGGTGTGGGGGAATCGATTGGGGGGATTTTGGGAAG TTTGTATGATGCACTCGCCGACCCACTGGGGGCATATGCAGGGTTGGACA CAGATTTGATTGCCGGGACGTTGGGGAGGGCATCGAGTGAGGGGGTTGTG ACCATGACGACGTTGACGGTGGTCCCGAGGGAGGAGCTGAGGGAGGGAGG GGGAGAAGGGGGAGAGGGAGGGGGACAGAGGGAGACGATCATGATGGTGG GGATGGGGGAAGGGGGAGGCTCTGCACATGATCATAAGGCTCGACCGAGC GAATGGTCGACGTATAGAGGGGCGAGTGGCGCGGGGGGTGCGTTGATGTC TCCAGTCATTCGCTCTCTCCCTCCCTCTTCGTCGTCCTCCTCCTCCTTGA CCTCAGTCACACTGCAACAACAGCAGCAGCAACAACAGCAAAAGCCGACA CTTTCATCCTCACTGGGCTGTACATCCTTCAATTCTTCCCCTTCCCTCAC CTCCTTCTTCTCCTCCGCCAAGGCTGCCGCTACTGGCTTGCGGAAAGGGC AACCACAGCATCAGCAACATCAGTCAAGAAGCAGCAGCACCCTCCGCGAT GAGATCACTACCCACACTAGCGGGAGAAGCAGTCTCATCGGGCCAATACC GAACCTAGGACTCCCGTCATCAGCACCAGCTGCAGTAGCAACGGCAGGGG CGAGCGCGGGTGCTGGAGGGGAAGCAACGTTGCCCCCTGCTTTCCCCCTT TCCCCTCCTTACACCTCGACCTCGGCCTCGGCCCTCAGTCCGGAACAGCT GGGCAAGCTCTCCTGGCGACAGCGAGAGGCAGCATTGGTAGAAACAATTG TGGAGATATGTGGTTCGGTGGGTTTGGGAAAGAAGGAGGGGAATGAGCTG TCGGGTGAGACGGACATGATGTCATTAGGCTTGAGTTCGATTAAGGCTGC GGAACTGATTGGTGCGATTGAGGCGCGATTTTGGCGAGGAGGGATGGGAG AGGAAATGGGAGGAAGGGAGGGAGGACTGTCGGAGGTAATAATGTTCGAG TGTGCGACTTTGCAGGATGTGGCTCAGCAGATTAATCGACGCCTTTTCAA GGGCAGAAAGGAGGGGGAAAGAGAAGGAGTAGCCGCGCTGGTGCAGCGAG GGGGATCCTGTATTATGGGGGCGACGGGGCAAGTGCTGGCGATGGGTGTG ACGGGAGCCTTATTCACCGTCTCGGTCCTGTTACCGCTCCAGCTTTGTCA GCTGTTCCTATCCTCCCCGGCAGTGGCAGGTGTGAATTACCCCTGGCTGC TATCCGCGCTGCTGCTCCTCCCCGCAGCCTACCTCCTCTTTCTCTTCTGT TTGATGGCATCGTTGACTTTGACTAAGTGGGCGGTGATGCAGGGTAGGTA TCAAGAAGGGACCTACTCGACCAGCAGCTTCTACTACATGCGGTGGGCCT TTACGAACAACCTCATGTCTTTCGCCCGTCGGAATTTCGTGGGCGTCTTG AAAGGCACTCCTATTTATACTTGGTGGCTGCAAAGCATGGGCCTCCGTCT TGCTGCAGGAGCTGTCGGCTTGCATCTTCCTCGTCTTTATTCTGATGACA TAACAGAATTTGATTTGGTTCACATCGGGGCGGGGGCTGTGGTGGGGGAG CAAGCACGGGTGCGAGGGGCGGTGGTGGAAGGCGGGTACCTGCACCTTCG TCCTGTCATTATTGGAGATCACGCGGTAATAGGCTCGCAGAGCACCCTTC TACCGGGTGCGATGTTGGGGAAAGGTGCGGAGCTTGCGCCTGCTTCTGTC CTATCAGGGCGTTCACCAGAGTTGCCGCCTTTCACAATGTGGGAGGGCTC GCCTGTCAAGATGGTGCGTCCACTGCCCGTCCCCAAGGAAGCAGCAGGAG CAGTGGCAGCCAACCGCAGTTGGCACAGGCCGCTGGATTCGATCATGACG AATGTTTTGGTTCCTTGCTTGGCGGTGTACAGCGCGGGGGCGTGCTTGGT CTTGGCTTCCTTTCCTGCCATGATCCTGCTGGGTGTTCTCCTCCTGGCTA CCTCGACAGGGGTAGGCACCGGCGCCGTAGAAGCTGGCAGAAGCAGCGTC ACGTGGAGCGATCTGATGGCTTTGAAAGATTACTCGTGGGCCTTAATCAT CGCTCCTATGGTCGCGACCTTTGGCCCTCTCACCCTGCCCTTCTTTGCCG TTATGACAGGCTTGGCTGGGGAGTCACTAGCCGCGCCCTTGGCGTCAACA GGGGTGGAGAGCACCACCTCTTTCTTAGCGTTGGCCCGTCTGGCTGCCTC GGAATATTACGTGGTGGGAGTGGGAGTCGGAGTGGGCCTGGCTTACCTCT TGTTTGGTCTCGCACTTGTCATGGCGGCGGCCGTCGTCCAGTACGTGACG GGCATGCTGCTCATCCTCATCTTTGACAACGGCATCCGCAGTAACAGCAG CAACCGCAACAGCAGCACCATTAAAACCAGGGCCCGCCAGTGGTTGGTAG ACTACCGAGAGCTGTTCCAAGCTGTGCTCTATATGCGATTCCCGGTCTTT CTGGGAGGGTCAATCGGATACAATCTCTACCTGCTCGCCTTGGGCGCGAA TGTGCACCTCGACGCCTTTGTCGCTTCCGAGCATGTGATCAAGAATCCTT CCGCCCTTGTCATTGGTGCTGGCGCGTTTATCCACCCCTCGGCGCTTTTG CACACCAGCCTAGCCGGCGGGAACACCAGCAACAACAGCAAGATTTTTAT TGGACAAGGCGCACTTGTGGGACCCAGTGCTGTGGTCGGTACGCTAGGCA CGCTTGAAGACGCTTCCACCCTTGCCCCTCTCACCTATCTTCCGGCAGGC AAGCGTGTACATACTGACACGACCAAGTGTGGGTATGCCACCCTCCTCCG TCTCAAGCAGCCCGCGCCCTTTCTCGGGAGAATCACCTCCATCCTGGCGA AAATAGGGTGGGCTACCTTCACCTTCAACTACTCCTGGATGGCGGTCGTG CTTTACATCGCGTTGGTATACGTAGCGTCCTACCCTTCCTTCGTTATCGT ACAGCTCGCCTTGGACTATACCGCCTCCTCCTCTTTCTCCTCCATCACCA ATGGCGGGGTCTGGCTTCCCGGCTTGCTGATGGCCGCGCTCTTCCCCCTC TTCGGTCTCTGTCTTCTCGCCTCGGCCGTCCTACTTAAGCGCCTGGCCCA CCCTGGTTATCTCCCCAGCAAGCACCACGCTCTCGGTGGCTCCTTCTATT ACCGGCACTTGTTTGTGACGGGATATCTCAAATTAATCGACCGGACATTT GCCTGCCTCTTGTATGGCAGCCGACTTTACAATTTTTACCTCTCACTTCT AGGTTTGTCGGTTGGGAGGGACTCTATTATCATGACTGGTAACGTGCTGG AGGGCGTTGACCTCCTTTCCATCGGAGACAAGACTGTAATCAATCGAGAC GTGCAGATAAGTGCTGTCAAGCTTAACCCCTCCTCCACCCTCCGTCCCTC CCTTCTGTTGGAAGTGGCGTCTGTGCGGATCGGGCATGAATGCACCCTGG GGGATGCGACTGTTGCAATGGCAACGAGTGAGATGAAGGACCTCGGTGTG AGTGCGGGGGGTACGTTGATGACCCCTGAGATCGTGTGTGGGCGCCGAGT GATGGTGGAGGGGAATCTGCCTTATCGTGTGGCACGTGGTGCGTCGGAGG CCTGCGTGAGCGAGGGCAGCAGTAGCAATCTGCTCACGCCTTCTGGACCC TTCAATGCCCCTTTGGAGCTTATTATCCCTGATTGTGACTTAAATCACGA ATGTGTCTTCTTCCAAAACCTCGCCGCTGTCGCTCCTGCTTCCTCCCCCC CCCCCCCATTCCTAGCACAGCTTCCCTACTCCCGCCCACAGTGCTGGTTA CGGGCGCCAATGGCTTTGTCGGCCGACATGTGGTGATAGAACTACTGCAA CGAGGTTTGCACGTTGTCTGCCTCGTCCGCAGGCGGGGGCACACCCTTGC CACAGACAGCCGCTCGCGGATGCTTGCTTCTCTGCAGGCGGCAAAGCTCA CACTGACAGCTGAGCAAAGCTTGCGGTTGCGTGTGGTGGATGGAGATGTG AGTCGGCCTTTGTTGGGGCTAACCAGGGTGTTATATGAGCAGCTGGCGGA GGAGGTGAGTGTGATTTTCCATTCTGCGGCCATGCTTGGATTTGCGGCGC CGTATTCGAATTTGAGGGAGACGAATGTGTTGGGGACAAAGCGTGCATTG GAGTTTGCAGTGTGTAGGAGGGTGAAGCGATTTAACCACGTCTCTTCCTT GCTGGCGACGAGCTTAGATATGACTAACTCAATGGGGAGGATCACGGAGG TATCGCCGTTGGGGAATGCGACGGTTTTCCCAGTTTTGGGGGCGAGTGAA TGGACGCATGGGTATGGGATGACGAAGTGGGCACAGGAGAAGCTGGTTCT CCAGGCGTTTGAGGCGGGGGTGTTGGGAACCATTGGGAGGTTGGGTGAGG TGGGTCCACATTCATTGACGGGGTGCATGGAGGAGGGGGTACTTGTGGAT TTGGTGAAGGAGACATTGGAAAAGGGAGTGGTGCCGATGATACTTGGACG AGTGAATGTCACGCCGGTAGACTATTGCGCGCGGGGGCTGGTGAGGGTTG GAATGGAGGGTTGGGGCCTCGGGAGAACATACCACTTGATGGATCCGAAC TTTGACTGTGGGGCAGACACGCTGGTGAGGTTGGTGGAAGATTTGGGGTA TATGAATAGCGACAGCAGCAGTAGTAGCAGCAGTAATAGCAGCAGCAATA GTAGCAGCAGCACCAGCAATAGCAGTGCTAGTGCGGCGCGGTGTGATTTT CTTTCATGGCGGGCGAAGATGAAGAAGGAGGGGGCTAGGAGGTCATGGTT TGTAGCTGGGATCCTGTCGGGGGAGCAGCAGCTAGTGGGACAGAATGTGG ACGCGACAGAGGGAGGGGCAATCATATCGCGGGAGGAAGCAGGGAAGGAG GTGGGGATGAATGGGGCGATATTGTTGAGAAGGTTTGCGAACTACAAAGG CTGGAAGAAGGAGAGGGAGATGGTGGACGTGCGGGTGGTGGTATCGCCGT CGTGAGGTTTGGAAGACGGGAGAGAAGGAGGGGGGGATGGATGGAAATAG ATATTGATGGAGCAATAAAGAAAAAGCAAGAACAGCGGGTACATCGAGTA AACGTAGGGAATAGGGATGAGATAGGGAGCGACAATAGGGCAAGATCTGT GAGTAGCTAGCACACATCTGATAGGAGTGGTACTTGGAGGGAAAGAAGAG TCTGAAAAGCAGAAGGGAAAAAGAGGAAAGGAGAGAGAAAGAGAAATCTG CCAAACGTGGAGATCTCACTCATTGCCTACAGCGTCCACCGAGGCAGAAG GTTCGGTATGAAGAGTCCGAGTCCAATCAGTCGATAGATCCATTTATTTT CATTTCTCCGCGTCCCGGTACGGCAACTAAATACGAAGACGTACATACAT TGAATTATTGTCTTCGTGCGACGGTTGGAAGTGAAAGTGTCACACATGCT CGGACACCTTTCTCCTTTCCCGCCTGAGGGGGGTGGTGAGGGTAGAGAAG GAGCAAGACGAGAGTTTCTAGCAACGGAAAGCACCACAAATTAATATATG AGATAAAACGCAAAACGGTAAACATGTAAGCGAACAGCAGGAACATTCGC ATACATGGACAAGAATCAAGGGTGAAAAATTGAGTCAAGCAAATTAAACA AACCTACCTGGATAACGAAGACAGAGAAAAAATTCAGCAGCAGCAGCAGC AGCAGCAGCAATCCTTAATTAAATTCGAGAGCAAGAGCAGGAATAAGATA GCCGAACTATCACAAAAAGAAAGTAAGAGAACGAAA
back to top

Coding sequence (CDS) from alignment at chr1:1385917..1395202-

>NO01G05220.1 ID=NO01G05220.1|Name=NO01G05220.1|organism=Nannochloropsis oceanica|type=CDS|length=6222bp|location=Sequence derived from alignment at chr1:1385917..1395202- (Nannochloropsis oceanica)
ATGACCAGCACGCCGGAAAAGCGAAGACCCACCGAGGGCGGCGGCAACGG
TGGCACCGGTATTGGCGGGCCAGCGATAGAAATGCAAGGCCCACCGTCGC
CTCCTAAGGGCTCTCGACGAGAGTCGAGTGCTCCGCCCGCACACTCGGCG
CCTGGCCAAGCTCGACGGGTACCATGTATCCTCCCTGAGTTGTGGGTGAC
GGATCCGCGGTTGAAGCAGCATCGGGGCGTGCTTGACGAGGTTATGGCCC
GCGTGCATGACTGGGCCGATTTGTTTGACATGCACCCTCCCGAGACGCTC
AACGAGGTCTTCCAAGTCTCAGTGGAGGCCAACCAGAAAAGGTCTGTCGA
GCCAGATATGTGGGCGCCTGTTCCTGATATCATGAAGGCATTGCGAGAGA
CGGCAGAAAGGATGGGAGACGAGGTGTTCGCAACTTGGGTGGACGCAGGG
GATAAGATAAATAGACATTGGACGTTTCGACAGACCTGGGAAGCTGCTGG
AGCGGTGGCACATGCGTTGGTCACTGAGTGGGGCGTCAAGCCGGGGGATA
GGGTCATGTTGTGCTATAATTTTAGCTATGAATACTTCCCTGCCTTCCTG
GGGTGTTTGAGGGCGGGGGCGGTGGCGTGCCCTGTGTATCCGATAGACCC
GAGTAAGATGGAGATTGCCTTGAACAAGTTTAAGCACGTGGTGGAGGACA
CGGGGGCTAGGTTGGTGTTGACTGACAAGCTCATCAATAGGGTCCGGATT
GGGTGCAGCATGTTTTATTCGCACTTGATGCCTCAGACGGTCGAGTGGAA
GGTGACCGATCACCTTGTCCAACCCACCTACACCTCGACCTTCCCCGCCC
CCTCCTACGACCACCCCAACCGCAAGCCCACCGACATCGCCTTCCTTCAG
TATACGAGCGGGTCGACTGGCGATCCCAAGGGCGTCATGATCAGCTATGG
CAACCTCGGAGCCAACGTCGGTCTCATCTCCGGCGCACAGAACTTCGCCT
TCTCCTACGCCGATCTCTTCCCCCTCACGTACGAGAAGCATGACGAAGCT
TGGTACAAAAGGCCCCGGTCCGTGTCATGGCTCCCGATGTATCACGACAT
GGGACTGGTGTATGGCGTGGTGACCCCATTCTACATGGGCGCGCGGATGC
ATTACATGAGTCCAATCACGTTTTTGAAGGACCCGTGTTCCTGGATTCGC
TTGTTGGCCAAGGAGAAGGCGACATGGGCGGCCGGACCTGATTTTGCCTA
CCGGTTGTGTGCGAAGAAATGGGACGCGAGTAAATGGACGACAGATGACT
ACACGTTGACGTACATGATTTACATGCACACGGGCGCCGAGCCGATTCGA
CCGACGACGATGGAGGATTTCAATCGGGTGTTTCGGCCGTACCATCTGCA
CGCGCGGGCCTTGTCGCCTTGTTATGGCCTGGCGGAGAGCGTGGTGTGTG
TGTCATGGTTTGATCCGGTGGCAAATCCACCGGAGACGATGATCTCGAAG
GGGGAGAGACCGGGATATGTGTGTTGTGCGGCTGATTGGAGGGTGGACTT
GCGGATTGTCGACCCGGAGACACGCGAGGAAGCGGAGGAGGGCGTGGCGG
GTGAGTTGTGGGTGTCGGGCCCGTCGGTGGCGTTGGGGTACTGGAACAAG
CCGGAATGGAGCGAGAAGGCTTTCCGGGCGAGGCTTACTAAGGCGGCGCC
AGCAGAGACGAGGCCCTGGGGAAGGTTTGGGAATGGGAAATATTTGCGCA
CTGGTGACATGGCGTTTATGCAAGATGGACGGATTTATTACTCGGGGCGG
TTGAAGGACATGATGATTGTGAGGGGGCAGAACTACTATGCGCAGGACAT
TGAGTTCCCGGCGCAGGATGCGTGGGGGGCGATTCGGGGGGGCTGTCTGG
CAGCGTTCTCGATGGATGTGGAGAGGGAGGAAGAAGAGCAGTTGTTTATC
GTGTTTGAGCTGGCCCCGGGTCGCTATAGCACGGAGGTTTTCCGAGAGAA
TATGGAGAGGGTGGCGAGGATGGTGAAGACAAAGGTGGGCTTGGATGTCT
ATAGGATGATTGCGGTGAAGGACAGGACGATCCCCAAGACGACCTCGGGG
AAAATTCGTCGGAGGGCCACGAAGGAGGCCATGATCATGGGAAGGCTCTG
GGTGCTGCATGACTCCCTGGGACTGTTGCCATTGGGAAAGGGGAAGGGTA
CGGCGACTGCAGCAGCAGCAGCAGCGGCGGCGGCAAGGGCATCGTCGTCG
ATGAGCGGAATGCCGACGCTGGAGAGGTCGGTGTCGTCGTCCTACCTGGC
CGGTGTGGGGGAATCGATTGGGGGGATTTTGGGAAGTTTGTATGATGCAC
TCGCCGACCCACTGGGGGCATATGCAGGGTTGGACACAGATTTGATTGCC
GGGACGTTGGGGAGGGCATCGAGTGAGGGGGTTGTGACCATGACGACGTT
GACGGTGGTCCCGAGGGAGGAGCTGAGGGAGGGAGGGGGAGAAGGGGGAG
AGGGAGGGGGACAGAGGGAGACGATCATGATGGTGGGGATGGGGGAAGGG
GGAGGCTCTGCACATGATCATAAGGCTCGACCGAGCGAATGGTCGACGTA
TAGAGGGGCGAGTGGCGCGGGGGGTGCGTTGATGTCTCCAGTCATTCGCT
CTCTCCCTCCCTCTTCGTCGTCCTCCTCCTCCTTGACCTCAGTCACACTG
CAACAACAGCAGCAGCAACAACAGCAAAAGCCGACACTTTCATCCTCACT
GGGCTGTACATCCTTCAATTCTTCCCCTTCCCTCACCTCCTTCTTCTCCT
CCGCCAAGGCTGCCGCTACTGGCTTGCGGAAAGGGCAACCACAGCATCAG
CAACATCAGTCAAGAAGCAGCAGCACCCTCCGCGATGAGATCACTACCCA
CACTAGCGGGAGAAGCAGTCTCATCGGGCCAATACCGAACCTAGGACTCC
CGTCATCAGCACCAGCTGCAGTAGCAACGGCAGGGGCGAGCGCGGGTGCT
GGAGGGGAAGCAACGTTGCCCCCTGCTTTCCCCCTTTCCCCTCCTTACAC
CTCGACCTCGGCCTCGGCCCTCAGTCCGGAACAGCTGGGCAAGCTCTCCT
GGCGACAGCGAGAGGCAGCATTGGTAGAAACAATTGTGGAGATATGTGGT
TCGGTGGGTTTGGGAAAGAAGGAGGGGAATGAGCTGTCGGGTGAGACGGA
CATGATGTCATTAGGCTTGAGTTCGATTAAGGCTGCGGAACTGATTGGTG
CGATTGAGGCGCGATTTTGGCGAGGAGGGATGGGAGAGGAAATGGGAGGA
AGGGAGGGAGGACTGTCGGAGGTAATAATGTTCGAGTGTGCGACTTTGCA
GGATGTGGCTCAGCAGATTAATCGACGCCTTTTCAAGGGCAGAAAGGAGG
GGGAAAGAGAAGGAGTAGCCGCGCTGGTGCAGCGAGGGGGATCCTGTATT
ATGGGGGCGACGGGGCAAGTGCTGGCGATGGGTGTGACGGGAGCCTTATT
CACCGTCTCGGTCCTGTTACCGCTCCAGCTTTGTCAGCTGTTCCTATCCT
CCCCGGCAGTGGCAGGTGTGAATTACCCCTGGCTGCTATCCGCGCTGCTG
CTCCTCCCCGCAGCCTACCTCCTCTTTCTCTTCTGTTTGATGGCATCGTT
GACTTTGACTAAGTGGGCGGTGATGCAGGGTAGGTATCAAGAAGGGACCT
ACTCGACCAGCAGCTTCTACTACATGCGGTGGGCCTTTACGAACAACCTC
ATGTCTTTCGCCCGTCGGAATTTCGTGGGCGTCTTGAAAGGCACTCCTAT
TTATACTTGGTGGCTGCAAAGCATGGGCCTCCGTCTTGCTGCAGGAGCTG
TCGGCTTGCATCTTCCTCGTCTTTATTCTGATGACATAACAGAATTTGAT
TTGGTTCACATCGGGGCGGGGGCTGTGGTGGGGGAGCAAGCACGGGTGCG
AGGGGCGGTGGTGGAAGGCGGGTACCTGCACCTTCGTCCTGTCATTATTG
GAGATCACGCGGTAATAGGCTCGCAGAGCACCCTTCTACCGGGTGCGATG
TTGGGGAAAGGTGCGGAGCTTGCGCCTGCTTCTGTCCTATCAGGGCGTTC
ACCAGAGTTGCCGCCTTTCACAATGTGGGAGGGCTCGCCTGTCAAGATGG
TGCGTCCACTGCCCGTCCCCAAGGAAGCAGCAGGAGCAGTGGCAGCCAAC
CGCAGTTGGCACAGGCCGCTGGATTCGATCATGACGAATGTTTTGGTTCC
TTGCTTGGCGGTGTACAGCGCGGGGGCGTGCTTGGTCTTGGCTTCCTTTC
CTGCCATGATCCTGCTGGGTGTTCTCCTCCTGGCTACCTCGACAGGGGTA
GGCACCGGCGCCGTAGAAGCTGGCAGAAGCAGCGTCACGTGGAGCGATCT
GATGGCTTTGAAAGATTACTCGTGGGCCTTAATCATCGCTCCTATGGTCG
CGACCTTTGGCCCTCTCACCCTGCCCTTCTTTGCCGTTATGACAGGCTTG
GCTGGGGAGTCACTAGCCGCGCCCTTGGCGTCAACAGGGGTGGAGAGCAC
CACCTCTTTCTTAGCGTTGGCCCGTCTGGCTGCCTCGGAATATTACGTGG
TGGGAGTGGGAGTCGGAGTGGGCCTGGCTTACCTCTTGTTTGGTCTCGCA
CTTGTCATGGCGGCGGCCGTCGTCCAGTACGTGACGGGCATGCTGCTCAT
CCTCATCTTTGACAACGGCATCCGCAGTAACAGCAGCAACCGCAACAGCA
GCACCATTAAAACCAGGGCCCGCCAGTGGTTGGTAGACTACCGAGAGCTG
TTCCAAGCTGTGCTCTATATGCGATTCCCGGTCTTTCTGGGAGGGTCAAT
CGGATACAATCTCTACCTGCTCGCCTTGGGCGCGAATGTGCACCTCGACG
CCTTTGTCGCTTCCGAGCATGTGATCAAGAATCCTTCCGCCCTTGTCATT
GGTGCTGGCGCGTTTATCCACCCCTCGGCGCTTTTGCACACCAGCCTAGC
CGGCGGGAACACCAGCAACAACAGCAAGATTTTTATTGGACAAGGCGCAC
TTGTGGGACCCAGTGCTGTGGTCGGTACGCTAGGCACGCTTGAAGACGCT
TCCACCCTTGCCCCTCTCACCTATCTTCCGGCAGGCAAGCGTGTACATAC
TGACACGACCAAGTGTGGGTATGCCACCCTCCTCCGTCTCAAGCAGCCCG
CGCCCTTTCTCGGGAGAATCACCTCCATCCTGGCGAAAATAGGGTGGGCT
ACCTTCACCTTCAACTACTCCTGGATGGCGGTCGTGCTTTACATCGCGTT
GGTATACGTAGCGTCCTACCCTTCCTTCGTTATCGTACAGCTCGCCTTGG
ACTATACCGCCTCCTCCTCTTTCTCCTCCATCACCAATGGCGGGGTCTGG
CTTCCCGGCTTGCTGATGGCCGCGCTCTTCCCCCTCTTCGGTCTCTGTCT
TCTCGCCTCGGCCGTCCTACTTAAGCGCCTGGCCCACCCTGGTTATCTCC
CCAGCAAGCACCACGCTCTCGGTGGCTCCTTCTATTACCGGCACTTGTTT
GTGACGGGATATCTCAAATTAATCGACCGGACATTTGCCTGCCTCTTGTA
TGGCAGCCGACTTTACAATTTTTACCTCTCACTTCTAGGTTTGTCGGTTG
GGAGGGACTCTATTATCATGACTGGTAACGTGCTGGAGGGCGTTGACCTC
CTTTCCATCGGAGACAAGACTGTAATCAATCGAGACGTGCAGATAAGTGC
TGTCAAGCTTAACCCCTCCTCCACCCTCCGTCCCTCCCTTCTGTTGGAAG
TGGCGTCTGTGCGGATCGGGCATGAATGCACCCTGGGGGATGCGACTGTT
GCAATGGCAACGAGTGAGATGAAGGACCTCGGTGTGAGTGCGGGGGGTAC
GTTGATGACCCCTGAGATCGTGTGTGGGCGCCGAGTGATGGTGGAGGGGA
ATCTGCCTTATCGTGTGGCACGTGGTGCGTCGGAGGCCTGCGTGAGCGAG
GGCAGCAGTAGCAATCTGCTCACGCCTTCTGGACCCTTCAATGCCCCTTT
GGAGCTTATTATCCCTGATTGTGACTTAAATCACGAATGTGTCTTCTTCC
AAAACCTCGCCGCTGTCGCTCCTGCTTCCTCCCCCCCCCCCCCATTCCTA
GCACAGCTTCCCTACTCCCGCCCACAGTGCTGGTTACGGGCGCCAATGGC
TTTGTCGGCCGACATGTGGTGA
back to top
Synonyms
Publications