NO01G04990.1, NO01G04990.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO01G04990.1
Unique NameNO01G04990.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1413
Alignment locationchr1:1324349..1326749 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1324349..1326749 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO01G04990.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G04990NO01G04990Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO01G04990.1NO01G04990.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO01G04990.1.cds1NO01G04990.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G04990.1.cds2NO01G04990.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G04990.1.cds3NO01G04990.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G04990.1.cds4NO01G04990.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G04990.1.cds5NO01G04990.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO01G04990.1 ID=NO01G04990.1|Name=NO01G04990.1|organism=Nannochloropsis oceanica|type=mRNA|length=1413bp
ATGCTTCCTAGCACACGTTCTCGCAAGGCCTCCGCCCGTCAGAGAGAGGA
ACTGGAGGCTGCGAGGGAGGAGGAGGAGAAGGGTAATCTTGATCTGACGG
GTCAGACGGGTCCGAGCGGAGGCCTTGTATCAGGACCAGCAGCAGCAGCA
GCAGCAGGCAGCGGTGAAGCTTGTGATGGAGGTCGTAAAGGAGATCGTGG
AGGTGCGCGTGCGGGAGCCTGTGGAGGAGCCAGTGGAGGAGGGGAGGAGG
CGGCGGCTAGCCATAACGTCATTCGGCAGAATATTACCTCATATGAGGAG
ATTTTACCACCTCCCTTCGCCGCTACGCCTGGCCATCCTGCTGTAGCTCT
TGCACCTGGTGCTCCTGGACCTGGTGCTGCCGGTGATCCCAGTGCTCCTG
CTCTAACCGGGAGCCGAGGAGGCGGTGGGGGAGGCCGCGGTGGCCGTGCT
GGACGGCGTGGGTGCCTTACTGGAGGTGTCGCACTAGCAGCGATACGAGC
CCCGCCTCCAGCAGCAGAAGAGGATAAATATGCGGCCTGGGAGAAGAGGA
TGCTGCGGGAGACTGCAGCGGCTGAGAGAAAGAATGTAATTGCGGCCGAG
AACATTGCGGCTGTCCCCGCAGAAATATCAAATTTAGAGGCGGAGATTAG
GGAGTTGAAGGAGATGATGCAGAACCTTGACAGGCGGCAACCAACAATAG
CCCACACGCCCCGCACGAAGGCCGTCCTCCAACGCATCCTTGTCCAGAAC
ATGATGGCCAGCGACGAGATCGGCTTGTTGATGGGCGCACCTGGCTTTAG
GAGGGTGGGAAGGGAGAACGATGATAGTCAGAAGGATGATGATGATGATG
ATGATGATGATGATGATGATGATGATGATGATGATGAGGAGGAGGAGTTG
CGCAGGCGGCGGCGGACTGGGGGTAGAGGGAAGGAGGAAAAGGAGGACAG
TGGAGAGGAAGACGACGATGACGAGGAGGATGATGAAGAATTAAAATTCT
GGGTCCGGCACCGTCGTCCTATCTTTTTGGCCATTGCCTACGAGGCGGGC
ATGCTCGTCAAAGTGGGCAACACCAATTATCACAACCTGGAAGAAGAGGC
CCTCAAGGCGCTCTTGGCGATGAGGAGTGTGGGCTCTCAGAGGGGCGAGG
GTCTTGAACAGGGTAAGGCAACGGATCCGGACGTCGTCACCATGGCCATA
ATCGACGCCACCAGGAGCGTTCAGAACTACGCCACCGTGAAGCTGGGGGG
GGCTCCCTTCGATAGCTTGGCTGTGTGTACCTACATAAAGTTCGAGATAG
GGCACGTCAGGAAAGAAGGGACTATGGGGAAGGGGGTCTATGGGAGTATT
GTGAGCATGTATGAGATGATGGTTCCTACCCGTGGGGTAGAGGAGGGAGG
CGGGCAGGTGTGA
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protein sequence of NO01G04990.1

>NO01G04990.1-protein ID=NO01G04990.1-protein|Name=NO01G04990.1|organism=Nannochloropsis oceanica|type=polypeptide|length=471bp
MLPSTRSRKASARQREELEAAREEEEKGNLDLTGQTGPSGGLVSGPAAAA
AAGSGEACDGGRKGDRGGARAGACGGASGGGEEAAASHNVIRQNITSYEE
ILPPPFAATPGHPAVALAPGAPGPGAAGDPSAPALTGSRGGGGGGRGGRA
GRRGCLTGGVALAAIRAPPPAAEEDKYAAWEKRMLRETAAAERKNVIAAE
NIAAVPAEISNLEAEIRELKEMMQNLDRRQPTIAHTPRTKAVLQRILVQN
MMASDEIGLLMGAPGFRRVGRENDDSQKDDDDDDDDDDDDDDDDDEEEEL
RRRRRTGGRGKEEKEDSGEEDDDDEEDDEELKFWVRHRRPIFLAIAYEAG
MLVKVGNTNYHNLEEEALKALLAMRSVGSQRGEGLEQGKATDPDVVTMAI
IDATRSVQNYATVKLGGAPFDSLAVCTYIKFEIGHVRKEGTMGKGVYGSI
VSMYEMMVPTRGVEEGGGQV*
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mRNA from alignment at chr1:1324349..1326749-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO01G04990.1 ID=NO01G04990.1|Name=NO01G04990.1|organism=Nannochloropsis oceanica|type=mRNA|length=2401bp|location=Sequence derived from alignment at chr1:1324349..1326749- (Nannochloropsis oceanica)
ATGCTTCCTAGCACACGTTCTCGCAAGGCCTCCGCCCGTCAGAGAGAGGA
ACTGGAGGCTGCGAGGGAGGAGGAGGAGAAGGGTAATCTTGATCTGACGG
GTCAGACGGGTCCGAGCGGAGGCCTTGTATCAGGACCAGCAGCAGCAGCA
GCAGCAGGCAGCGGTGAAGCTTGTGATGGAGGTCGTAAAGGAGATCGTGG
AGGTGCGCGTGCGGGAGCCTGTGGAGGAGCCAGTGGAGGAGGGGAGGAGG
CGGCGGCTAGCCATAACGTCATTCGGCAGAATATTACCTCATATGAGGAG
ATTTTACCACCTCCCTTCGCCGCTACGCCTGGCCATCCTGCTGTAGCTCT
TGCACCTGGTGCTCCTGGACCTGGTGCTGCCGGTGATCCCAGTGCTCCTG
CTCTAACCGGGAGCCGAGGAGGCGGTGGGGGAGGCCGCGGTGGCCGTGCT
GGACGGCGTGGGTGCCTTACTGGAGGTGTCGCACTAGCAGCGATACGAGC
CCCGCCTCCAGCAGCAGAAGAGGATAAATATGCGGCCTGGGAGAAGAGGA
TGCTGCGGGAGACTGCAGCGGCTGAGAGAAAGAATGTAATTGCGGCCGAG
AACATTGCGGCTGTCCCCGCAGAAATATCAAATTTAGAGGCGGAGATTAG
GGAGTTGAAGGAGATGATGCAGAACCTTGGTAAGTCGGGGGAGGATTGAA
CGGGAGGGAGGGAGGGGGGGAGCTGAGTCCTTTTCTCCATTGGCCCCATT
GTGCTGCCGCCTCCTGCTGGAGATGAGAAATGATATAAAAATTGAGATAT
CTTTCTTCCCTCAACGTCAGACAGGCGGCAACCAACAATAGCGTGCGTCA
GTACCTGCACCCTCCGCCACCTAAGTCCTCCTCCTCCTCCGCTTCTAGCC
ACACGCCCCGCACGAAGGCCGTCCTCCAACGCATCCTTGTCCAGAACATG
ATGGCCAGCGACGAGATCGGCTTGTTGATGGGCGCACCTGGCTTTAGGAG
GGTGGGAAGGGAGAACGATGATAGTCAGAAGGATGATGATGATGATGATG
ATGATGATGATGATGATGATGATGATGATGATGAGGAGGAGGAGTTGCGC
AGGCGGCGGCGGACTGGGGGTAGAGGGAAGGAGGAAAAGGAGGACAGTGG
AGAGGAAGACGACGATGACGAGGAGGATGATGAAGAATTAGTAAGATTGT
TTATGTTGTACAGAAAATATAGAAAGCAGCGCTGGGCTAAGCGCAGAAGG
GAGGAGGAGGAGGAGGAGGGGAATTGGGGGGGGGATGAGGGCGAGGAGGA
CGGGATGGGAGGCGGTGCTTAAGGAAGCAGAGGGAGGAGGAGAATTGTGG
CTGTTGATGTCGTGAATGAGTATGTGAAGGGAGTCGAGGAGAAGAATAGG
CGACAGCGTTTGCGGAAGAAGGGGAGGGATGAGGAGAGGAAGCGGCAGCA
ACAGCCTCGGGAGGAGCTGCTCTTGAAGCAAGCGCTTACACTGCTTGTAC
CGCCCGGCCCGCCGGAGATCACGTTGAGCACTAGCGTCACCTCCGTCACT
GACGTCTACCGCGAGTGGTTCAGTCGTTCAGCCGTCGGGGACGGGAAGCC
GCTGCAGTATTATTTCCTCCTTGCGCCTCCAGGCGGGAAGGGTCCGTCCT
CGCACTATATCCAAAACAGGCACATTGACAACGGATATGGCAGGACTTAG
AAATTCTGGGTCCGGCACCGTCGTCCTATCTTTTTGGCCATTGCCTACGA
GGTAAGCCACAGGGGGAGGTTGAGACGGCTGCTGGTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCCTCCCTCCCTCCCACTCTCCCACTCTCCCTCTCT
CCCTCATATCTCCCTTTTTCCCTCCCTCCCCCACCAAGGAGAGCGACAAC
TGAGTAGCATGGAAATGCTCCTTGAAACGCCACTAGCTTTGTTTTTGAGA
TGGGCAATCACTCCCCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCC
TCCCACCTTCCCTCCCTCATTCCTCCCCCCAGGCGGGCATGCTCGTCAAA
GTGGGCAACACCAATTATCACAACCTGGAAGAAGAGGCCCTCAAGGCGCT
CTTGGCGATGAGGAGTGTGGGCTCTCAGAGGGGCGAGGGTCTTGAACAGG
GTAAGGCAACGGATCCGGACGTCGTCACCATGGCCATAATCGACGCCACC
AGGAGCGTTCAGAACTACGCCACCGTGAAGCTGGGGGGGGCTCCCTTCGA
TAGCTTGGCTGTGTGTACCTACATAAAGTTCGAGATAGGGCACGTCAGGA
AAGAAGGGACTATGGGGAAGGGGGTCTATGGGAGTATTGTGAGCATGTAT
GAGATGATGGTTCCTACCCGTGGGGTAGAGGAGGGAGGCGGGCAGGTGTG
A
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Coding sequence (CDS) from alignment at chr1:1324349..1326749-

>NO01G04990.1 ID=NO01G04990.1|Name=NO01G04990.1|organism=Nannochloropsis oceanica|type=CDS|length=1413bp|location=Sequence derived from alignment at chr1:1324349..1326749- (Nannochloropsis oceanica)
ATGCTTCCTAGCACACGTTCTCGCAAGGCCTCCGCCCGTCAGAGAGAGGA
ACTGGAGGCTGCGAGGGAGGAGGAGGAGAAGGGTAATCTTGATCTGACGG
GTCAGACGGGTCCGAGCGGAGGCCTTGTATCAGGACCAGCAGCAGCAGCA
GCAGCAGGCAGCGGTGAAGCTTGTGATGGAGGTCGTAAAGGAGATCGTGG
AGGTGCGCGTGCGGGAGCCTGTGGAGGAGCCAGTGGAGGAGGGGAGGAGG
CGGCGGCTAGCCATAACGTCATTCGGCAGAATATTACCTCATATGAGGAG
ATTTTACCACCTCCCTTCGCCGCTACGCCTGGCCATCCTGCTGTAGCTCT
TGCACCTGGTGCTCCTGGACCTGGTGCTGCCGGTGATCCCAGTGCTCCTG
CTCTAACCGGGAGCCGAGGAGGCGGTGGGGGAGGCCGCGGTGGCCGTGCT
GGACGGCGTGGGTGCCTTACTGGAGGTGTCGCACTAGCAGCGATACGAGC
CCCGCCTCCAGCAGCAGAAGAGGATAAATATGCGGCCTGGGAGAAGAGGA
TGCTGCGGGAGACTGCAGCGGCTGAGAGAAAGAATGTAATTGCGGCCGAG
AACATTGCGGCTGTCCCCGCAGAAATATCAAATTTAGAGGCGGAGATTAG
GGAGTTGAAGGAGATGATGCAGAACCTTGACAGGCGGCAACCAACAATAG
CCCACACGCCCCGCACGAAGGCCGTCCTCCAACGCATCCTTGTCCAGAAC
ATGATGGCCAGCGACGAGATCGGCTTGTTGATGGGCGCACCTGGCTTTAG
GAGGGTGGGAAGGGAGAACGATGATAGTCAGAAGGATGATGATGATGATG
ATGATGATGATGATGATGATGATGATGATGATGATGAGGAGGAGGAGTTG
CGCAGGCGGCGGCGGACTGGGGGTAGAGGGAAGGAGGAAAAGGAGGACAG
TGGAGAGGAAGACGACGATGACGAGGAGGATGATGAAGAATTAAAATTCT
GGGTCCGGCACCGTCGTCCTATCTTTTTGGCCATTGCCTACGAGGCGGGC
ATGCTCGTCAAAGTGGGCAACACCAATTATCACAACCTGGAAGAAGAGGC
CCTCAAGGCGCTCTTGGCGATGAGGAGTGTGGGCTCTCAGAGGGGCGAGG
GTCTTGAACAGGGTAAGGCAACGGATCCGGACGTCGTCACCATGGCCATA
ATCGACGCCACCAGGAGCGTTCAGAACTACGCCACCGTGAAGCTGGGGGG
GGCTCCCTTCGATAGCTTGGCTGTGTGTACCTACATAAAGTTCGAGATAG
GGCACGTCAGGAAAGAAGGGACTATGGGGAAGGGGGTCTATGGGAGTATT
GTGAGCATGTATGAGATGATGGTTCCTACCCGTGGGGTAGAGGAGGGAGG
CGGGCAGGTGTGA
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Synonyms
Publications