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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr1 | genome | chr1:1221473..1224281 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO01G04630.1 vs.
Match: EWM29411.1 (glutathione reductase [Nannochloropsis gaditana]) HSP 1 Score: 858.6 bits (2217), Expect = 1.200e-245 Identity = 425/527 (80.65%), Postives = 474/527 (89.94%), Query Frame = 0
Query: 78 MLPLVRGGGALLLAVVISILVDHVAHAFLPMPRCIMKHASRLPKLRARRSLLSASSSASSDSPTHFDYLVIGGGSGGIASARRAASYGAKVGVIEKQYLGGTCVNVGCVPKKVMWNAAHVREILAGAKHFGFDLDGHGVPFDWPMLKKARDDYVQRLNGIYAKNLGASEVAIIEGAASFAGPKTLRVGSTDYTAEHILIAVGGQPRMLSIPGAKEFAITSDGFFDLPEMPKRVGVVGGGYIAVELAGVLSELGSETTLICRGESVLRGFDNLITSTLMEEMQKAGLKFRGMSTPKAVVKEEGGLMVELEEGGREGPFDTLLLATGRSTAITNLGLEGAGIETDKAGYVQVDEYQNTNVGGVYALGDVCGRVQLTPMAIAAGRRLADRLFGSIPDAKADYDGVPTVVFSHPPIGTVGLTEQQAKEEHGEDNVKIYSSKFVNLFYGPWRLAPEEKPKTAMKLVCVGPEEKVVGLHVIGMGADEMLQGFAVAMKMGATKADFDACVALHPTAAEEFVTLAPWGLKGKRSR 605
MLP VRGG L LA+V+S+L++HVAHAFLP+P C+ + SRL LR+R S L A +S SSDS THFD+LVIG GSGGIASARRAASYG KV V+EK+ LGGTCVNVGCVPKKVMWNAAHVREI+ GAK+FGFD+DGH V FDWPMLKKARDDYV RLNGIYAKNL ASEVA++EGAASF+GPK+LR+GS +YTAEHILIAVGGQPRML IPGA+E AITSDGFF+L E PKRVGVVGGGYIAVELAGVL ELGS+TT+ICRG+ VLRGFD LI++TL+EEM+KAG+ F+ +TPKA+ KE GL+VELEEGG GPFDT+LLATGR TAI +LGL AG+ETDK G V VDEYQNTNVGGVYALGDVCGRVQLTPMAIAAGRRLADRLFGS+P+AKADYD VPTVVFSHPPIGTVGLTE QAKEE+GE NV++YSSKFVNLFYGPWRLAPEEKPKTAMK+VCVG EE+VVGLHVIGMGADEMLQGFAVA+KMGATKADFDACVALHPTAAEE VTL+PWGL+GKRSR
Sbjct: 1 MLPFVRGGSVLFLALVLSVLLEHVAHAFLPLPNCVKRQTSRLSGLRSRHSFLKALAS-SSDS-THFDFLVIGAGSGGIASARRAASYGVKVAVVEKKALGGTCVNVGCVPKKVMWNAAHVREIMLGAKNFGFDVDGHDVGFDWPMLKKARDDYVSRLNGIYAKNLAASEVALLEGAASFSGPKSLRIGSKEYTAEHILIAVGGQPRMLDIPGAQEHAITSDGFFELAEQPKRVGVVGGGYIAVELAGVLHELGSQTTIICRGDGVLRGFDELISTTLVEEMKKAGMAFKHDATPKAIRKEAEGLIVELEEGGTVGPFDTVLLATGRVTAIDSLGLAEAGVETDKRGNVLVDEYQNTNVGGVYALGDVCGRVQLTPMAIAAGRRLADRLFGSLPEAKADYDDVPTVVFSHPPIGTVGLTEAQAKEEYGEGNVRVYSSKFVNLFYGPWRLAPEEKPKTAMKMVCVGEEERVVGLHVIGMGADEMLQGFAVAVKMGATKADFDACVALHPTAAEELVTLSPWGLRGKRSR 525
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO01G04630.1 ID=NO01G04630.1|Name=NO01G04630.1|organism=Nannochloropsis oceanica|type=mRNA|length=2469bp TTGCTGCTGTTGCGTGGACTGCTGCAGGGGGGAGTAAGGGATGGGGTGGA GTGAGAGAAAAAAGATGGTCAGTGCGTGAAAATGCGTGCGATCGACGCAG CGGGAGGAAGAAACGCTGTTGCAAGCACCAGGTTTCAACCGTGAAGCCGT GATGTGTGGGCAGTGCGGATCTGTGGTTGCGTGCAGGCGAGAGTCTGCCA GTGGTTGAAGACAAATGGTCAAGGTGCTTTGTTCTGCGGGCTGGTGCTTC GACACTTTATCCAAAGCTACAAACTCCATCGAAATTGATACGCCTGACAG TGACTCAACGCGCAGGAGCTTATCTGTCTTCCTATCCTTTGGTGGGGTGA ATGGTCCAGAGCAAAGCGGGAATTTGGTGTGGTAAGTGGACGTACTGCAT GGCAGGGACGCTGCGTTTGGCGATTCTATCAGAAGGCCTTTCGAGTGCCC GCGTCCGCTCACACAACAGATTGCAACAAACTACACCAGCTCAAGCATAC ACTGCCGGAGAGAGCGTTTGCGCCTAAGAAAACCACCTGCCTGTACCTAA AGCGCGACCTTAGTACGAAAGATGCCTGCCATTATGACCACACAAAAGGC ATGAGGCATGATATCGATCGTTCAAGCAATAAGCCGTCCGCCCGACCAAA TGATTCCCGACCCTATTTTGTACGATTGGGACTTGCCCCACCCATTCGCA AAGATGAGGCTTATCTGTATAGATTGTGTAGCATGTCGTCTATCACAGAC CTCCAGTGTTTCTCTCCCATTATCACACAAGCAGCAACTCGGACCTCCCC ACCCCAGTACTCTCCTCCCCTACCACCCGCAATGCTGCCACTCGTGCGCG GCGGAGGGGCTTTGCTCCTTGCCGTGGTAATAAGCATTCTCGTCGACCAT GTCGCCCATGCCTTCCTGCCAATGCCGCGATGCATTATGAAACACGCCTC CCGCCTTCCAAAACTGCGCGCCCGCCGCTCCCTCCTGAGCGCCTCCTCCT CTGCCAGTAGCGACAGTCCCACGCATTTCGACTACCTTGTCATTGGCGGA GGCAGTGGTGGCATCGCTTCGGCCCGTCGTGCTGCGTCTTACGGCGCAAA AGTCGGTGTGATTGAAAAGCAATACTTGGGTGGCACCTGTGTCAACGTAG GGTGTGTGCCCAAGAAAGTCATGTGGAACGCGGCGCATGTCAGGGAAATA CTGGCAGGGGCCAAACACTTTGGGTTTGATTTGGACGGGCATGGTGTACC GTTCGATTGGCCGATGCTGAAGAAGGCCCGCGATGACTACGTCCAACGTC TCAACGGCATCTACGCCAAGAATCTGGGCGCGTCGGAGGTGGCGATCATT GAGGGCGCTGCCTCATTCGCCGGTCCCAAGACCCTCCGTGTGGGGAGCAC TGACTACACCGCCGAGCATATCCTCATCGCAGTGGGAGGACAGCCCAGAA TGCTGTCTATTCCGGGGGCGAAGGAATTTGCGATTACCAGTGACGGTTTT TTTGATTTGCCTGAGATGCCGAAGAGAGTGGGAGTGGTAGGGGGCGGATA CATCGCAGTAGAGCTGGCGGGAGTATTGAGTGAATTGGGCAGTGAGACGA CGTTGATTTGTAGGGGGGAGTCGGTCTTGAGGGGCTTTGATAACTTGATC ACCTCGACGCTGATGGAGGAGATGCAAAAGGCGGGATTGAAGTTCAGGGG CATGTCGACGCCCAAGGCGGTGGTAAAGGAAGAGGGAGGGTTGATGGTGG AGTTGGAGGAGGGAGGGAGGGAGGGTCCGTTTGATACGCTGTTGTTGGCG ACAGGGAGATCCACGGCCATTACGAATTTGGGTTTGGAGGGGGCGGGGAT TGAGACGGATAAGGCCGGCTACGTGCAGGTGGATGAGTATCAGAACACGA ATGTGGGGGGTGTGTACGCGTTGGGGGACGTGTGTGGAAGAGTGCAGCTG ACGCCAATGGCGATTGCGGCGGGGAGACGGTTGGCGGATCGATTGTTTGG CTCGATCCCAGATGCGAAGGCGGATTATGATGGTGTCCCGACCGTGGTGT TCTCGCACCCGCCCATTGGTACGGTGGGATTGACGGAGCAGCAGGCGAAG GAGGAGCATGGAGAGGACAATGTGAAGATCTATAGCAGCAAGTTTGTGAA TTTGTTTTACGGTCCCTGGCGACTTGCACCTGAGGAGAAGCCCAAGACGG CGATGAAGCTTGTGTGCGTAGGACCGGAAGAGAAGGTGGTGGGCCTGCAC GTGATAGGGATGGGGGCGGACGAGATGCTGCAGGGTTTTGCGGTCGCGAT GAAGATGGGAGCCACCAAGGCCGACTTTGACGCGTGTGTGGCGTTGCACC CGACGGCGGCGGAAGAGTTTGTGACATTGGCGCCGTGGGGGTTGAAAGGG AAGAGGAGCAGGTGATTTGATGATTTGTGGGGGGGAGGGGAGGGAGGGAG AAAGGAAGCAAGGCAGGAA back to topprotein sequence of NO01G04630.1 >NO01G04630.1-protein ID=NO01G04630.1-protein|Name=NO01G04630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=605bp MRHDIDRSSNKPSARPNDSRPYFVRLGLAPPIRKDEAYLYRLCSMSSITD LQCFSPIITQAATRTSPPQYSPPLPPAMLPLVRGGGALLLAVVISILVDH VAHAFLPMPRCIMKHASRLPKLRARRSLLSASSSASSDSPTHFDYLVIGG GSGGIASARRAASYGAKVGVIEKQYLGGTCVNVGCVPKKVMWNAAHVREI LAGAKHFGFDLDGHGVPFDWPMLKKARDDYVQRLNGIYAKNLGASEVAII EGAASFAGPKTLRVGSTDYTAEHILIAVGGQPRMLSIPGAKEFAITSDGF FDLPEMPKRVGVVGGGYIAVELAGVLSELGSETTLICRGESVLRGFDNLI TSTLMEEMQKAGLKFRGMSTPKAVVKEEGGLMVELEEGGREGPFDTLLLA TGRSTAITNLGLEGAGIETDKAGYVQVDEYQNTNVGGVYALGDVCGRVQL TPMAIAAGRRLADRLFGSIPDAKADYDGVPTVVFSHPPIGTVGLTEQQAK EEHGEDNVKIYSSKFVNLFYGPWRLAPEEKPKTAMKLVCVGPEEKVVGLH VIGMGADEMLQGFAVAMKMGATKADFDACVALHPTAAEEFVTLAPWGLKG KRSR* back to topmRNA from alignment at chr1:1221473..1224281- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO01G04630.1 ID=NO01G04630.1|Name=NO01G04630.1|organism=Nannochloropsis oceanica|type=mRNA|length=2809bp|location=Sequence derived from alignment at chr1:1221473..1224281- (Nannochloropsis oceanica) TTGCTGCTGTTGCGTGGACTGCTGCAGGGGGGAGTAAGGGATGGGGTGGA
GTGAGAGAAAAAAGATGGTCAGTGCGTGAAAATGCGTGCGATCGACGCAG
CGGGAGGAAGAAACGCTGTTGCAAGCACCAGGTTTCAACCGTGAAGCCGT
GATGTGTGGGCAGTGCGGATCTGTGGTTGCGTGCAGGCGAGAGTCTGCCA
GTGGTTGAAGACAAATGGTCAAGGTGCTTTGTTCTGCGGGCTGGTGCTTC
GACACTTTATCCAAAGCTACAAACTCCATCGAAATTGATACGCCTGACAG
TGACTCAACGCGCAGGAGCTTATCTGTCTTCCTATCCTTTGGTGGGGTGA
ATGGTCCAGAGCAAAGCGGGAATTTGGTGTGGTAAGTGGACGTACTGCAT
GGCAGGGACGCTGCGTTTGGCGATTCTATCAGAAGGCCTTTCGAGTGCCC
GCGTCCGCTCACACAACAGATTGCAACAAACTACACCAGCTCAAGCATAC
ACTGCCGGAGAGAGCGTTTGCGCCTAAGAAAACCACCTGCCTGTACCTAA
AGCGCGACCTTAGTACGAAAGATGCCTGCCATTATGACCACACAAAAGGC
ATGAGGCATGATATCGATCGTTCAAGCAATAAGCCGTCCGCCCGACCAAA
TGATTCCCGACCCTATTTTGTACGATTGGGACTTGCCCCACCCATTCGCA
AAGATGAGGCTTATCTGTATAGATTGTGTAGCATGTCGTCTATCACAGAC
CTCCAGTGTTTCTCTCCCATTATCACACAAGCAGCAACTCGGACCTCCCC
ACCCCAGTACTCTCCTCCCCTACCACCCGCAATGCTGCCACTCGTGCGCG
GCGGAGGGGCTTTGCTCCTTGCCGTGGTAATAAGCATTCTCGTCGACCAT
GTCGCCCATGCCTTCCTGCCAATGCCGCGATGCATTATGGTAAGTTGATT
TATTAAAGCATCGTTCCTTTCCTTCTAGAGGAAGAAGGTATCCCCTGTAT
GTCTTCCGTCCTCATTATCCACAACGCCTGTGCTCTTCAATTGTGCGTCA
TTTCTCTCACCAATTTTATCAAAGTCTCCATCACAATGCTTTCCTATCCC
AATCTCCTCCTTTCTCGCCTTGCTACGACACAGAAACACGCCTCCCGCCT
TCCAAAACTGCGCGCCCGCCGCTCCCTCCTGAGCGCCTCCTCCTCTGCCA
GTAGCGACAGTCCCACGCATTTCGACTACCTTGTCATTGGCGGAGGCAGT
GGTGGCATCGCTTCGGCCCGTCGTGCTGCGTCTTACGGCGCAAAAGTCGG
TGTGATTGAAAAGCAATACTTGGGTGGCACCTGTGTCAACGTAGGGTGTG
TGCCCAAGAAAGTCATGTGGAACGCGGCGCATGTCAGGGAAATACTGGCA
GGGGCCAAACACTTTGGGTTTGATTTGGACGGGCATGGTGTACCGTTCGA
TTGGCCGATGCTGAAGAAGGTAAGGGAGGGGGAAGGGAGAGGAGGGAGGG
AGGGCGGGCGGGAGGACGGGCTCGAGGAAGGAAGTTAGGCGATGGTCAGG
ATTAGCAGTAGATTCATTCATTGATCTCTCCCTCCCTTCCTCTCTCTCTT
CCTCTCTTCACACAGGCCCGCGATGACTACGTCCAACGTCTCAACGGCAT
CTACGCCAAGAATCTGGGCGCGTCGGAGGTGGCGATCATTGAGGGCGCTG
CCTCATTCGCCGGTCCCAAGACCCTCCGTGTGGGGAGCACTGACTACACC
GCCGAGCATATCCTCATCGCAGTGGGAGGACAGCCCAGAATGCTGTCTAT
TCCGGGGGCGAAGGAATTTGCGATTACCAGTGACGGTTTTTTTGATTTGC
CTGAGATGCCGAAGAGAGTGGGAGTGGTAGGGGGCGGATACATCGCAGTA
GAGCTGGCGGGAGTATTGAGTGAATTGGGCAGTGAGACGACGTTGATTTG
TAGGGGGGAGTCGGTCTTGAGGGGCTTTGATAACTTGATCACCTCGACGC
TGATGGAGGAGATGCAAAAGGCGGGATTGAAGTTCAGGGGCATGTCGACG
CCCAAGGCGGTGGTAAAGGAAGAGGGAGGGTTGATGGTGGAGTTGGAGGA
GGGAGGGAGGGAGGGTCCGTTTGATACGCTGTTGTTGGCGACAGGGAGAT
CCACGGCCATTACGAATTTGGGTTTGGAGGGGGCGGGGATTGAGACGGAT
AAGGCCGGCTACGTGCAGGTGGATGAGTATCAGAACACGAATGTGGGGGG
TGTGTACGCGTTGGGGGACGTGTGTGGAAGAGTGCAGCTGACGCCAATGG
CGATTGCGGCGGGGAGACGGTTGGCGGATCGATTGTTTGGCTCGATCCCA
GATGCGAAGGCGGATTATGATGGTGTCCCGACCGTGGTGTTCTCGCACCC
GCCCATTGGTACGGTGGGATTGACGGAGCAGCAGGCGAAGGAGGAGCATG
GAGAGGACAATGTGAAGATCTATAGCAGCAAGTTTGTGAATTTGTTTTAC
GGTCCCTGGCGACTTGCACCTGAGGAGAAGCCCAAGACGGCGATGAAGCT
TGTGTGCGTAGGACCGGAAGAGAAGGTGGTGGGCCTGCACGTGATAGGGA
TGGGGGCGGACGAGATGCTGCAGGGTTTTGCGGTCGCGATGAAGATGGGA
GCCACCAAGGCCGACTTTGACGCGTGTGTGGCGTTGCACCCGACGGCGGC
GGAAGAGTTTGTGACATTGGCGCCGTGGGGGTTGAAAGGGAAGAGGAGCA
GGTGATTTGATGATTTGTGGGGGGGAGGGGAGGGAGGGAGAAAGGAAGCA
AGGCAGGAA back to topCoding sequence (CDS) from alignment at chr1:1221473..1224281- >NO01G04630.1 ID=NO01G04630.1|Name=NO01G04630.1|organism=Nannochloropsis oceanica|type=CDS|length=1815bp|location=Sequence derived from alignment at chr1:1221473..1224281- (Nannochloropsis oceanica) ATGAGGCATGATATCGATCGTTCAAGCAATAAGCCGTCCGCCCGACCAAA TGATTCCCGACCCTATTTTGTACGATTGGGACTTGCCCCACCCATTCGCA AAGATGAGGCTTATCTGTATAGATTGTGTAGCATGTCGTCTATCACAGAC CTCCAGTGTTTCTCTCCCATTATCACACAAGCAGCAACTCGGACCTCCCC ACCCCAGTACTCTCCTCCCCTACCACCCGCAATGCTGCCACTCGTGCGCG GCGGAGGGGCTTTGCTCCTTGCCGTGGTAATAAGCATTCTCGTCGACCAT GTCGCCCATGCCTTCCTGCCAATGCCGCGATGCATTATGAAACACGCCTC CCGCCTTCCAAAACTGCGCGCCCGCCGCTCCCTCCTGAGCGCCTCCTCCT CTGCCAGTAGCGACAGTCCCACGCATTTCGACTACCTTGTCATTGGCGGA GGCAGTGGTGGCATCGCTTCGGCCCGTCGTGCTGCGTCTTACGGCGCAAA AGTCGGTGTGATTGAAAAGCAATACTTGGGTGGCACCTGTGTCAACGTAG GGTGTGTGCCCAAGAAAGTCATGTGGAACGCGGCGCATGTCAGGGAAATA CTGGCAGGGGCCAAACACTTTGGGTTTGATTTGGACGGGCATGGTGTACC GTTCGATTGGCCGATGCTGAAGAAGGCCCGCGATGACTACGTCCAACGTC TCAACGGCATCTACGCCAAGAATCTGGGCGCGTCGGAGGTGGCGATCATT GAGGGCGCTGCCTCATTCGCCGGTCCCAAGACCCTCCGTGTGGGGAGCAC TGACTACACCGCCGAGCATATCCTCATCGCAGTGGGAGGACAGCCCAGAA TGCTGTCTATTCCGGGGGCGAAGGAATTTGCGATTACCAGTGACGGTTTT TTTGATTTGCCTGAGATGCCGAAGAGAGTGGGAGTGGTAGGGGGCGGATA CATCGCAGTAGAGCTGGCGGGAGTATTGAGTGAATTGGGCAGTGAGACGA CGTTGATTTGTAGGGGGGAGTCGGTCTTGAGGGGCTTTGATAACTTGATC ACCTCGACGCTGATGGAGGAGATGCAAAAGGCGGGATTGAAGTTCAGGGG CATGTCGACGCCCAAGGCGGTGGTAAAGGAAGAGGGAGGGTTGATGGTGG AGTTGGAGGAGGGAGGGAGGGAGGGTCCGTTTGATACGCTGTTGTTGGCG ACAGGGAGATCCACGGCCATTACGAATTTGGGTTTGGAGGGGGCGGGGAT TGAGACGGATAAGGCCGGCTACGTGCAGGTGGATGAGTATCAGAACACGA ATGTGGGGGGTGTGTACGCGTTGGGGGACGTGTGTGGAAGAGTGCAGCTG ACGCCAATGGCGATTGCGGCGGGGAGACGGTTGGCGGATCGATTGTTTGG CTCGATCCCAGATGCGAAGGCGGATTATGATGGTGTCCCGACCGTGGTGT TCTCGCACCCGCCCATTGGTACGGTGGGATTGACGGAGCAGCAGGCGAAG GAGGAGCATGGAGAGGACAATGTGAAGATCTATAGCAGCAAGTTTGTGAA TTTGTTTTACGGTCCCTGGCGACTTGCACCTGAGGAGAAGCCCAAGACGG CGATGAAGCTTGTGTGCGTAGGACCGGAAGAGAAGGTGGTGGGCCTGCAC GTGATAGGGATGGGGGCGGACGAGATGCTGCAGGGTTTTGCGGTCGCGAT GAAGATGGGAGCCACCAAGGCCGACTTTGACGCGTGTGTGGCGTTGCACC CGACGGCGGCGGAAGAGTTTGTGACATTGGCGCCGTGGGGGTTGAAAGGG AAGAGGAGCAGGTGA back to top
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