NO01G04630.1, NO01G04630.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO01G04630.1
Unique NameNO01G04630.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2469
Alignment locationchr1:1221473..1224281 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1221473..1224281 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO01G04630.1 vs.
Match: EWM29411.1 (glutathione reductase [Nannochloropsis gaditana])

HSP 1 Score: 858.6 bits (2217), Expect = 1.200e-245
Identity = 425/527 (80.65%), Postives = 474/527 (89.94%), Query Frame = 0
Query:   78 MLPLVRGGGALLLAVVISILVDHVAHAFLPMPRCIMKHASRLPKLRARRSLLSASSSASSDSPTHFDYLVIGGGSGGIASARRAASYGAKVGVIEKQYLGGTCVNVGCVPKKVMWNAAHVREILAGAKHFGFDLDGHGVPFDWPMLKKARDDYVQRLNGIYAKNLGASEVAIIEGAASFAGPKTLRVGSTDYTAEHILIAVGGQPRMLSIPGAKEFAITSDGFFDLPEMPKRVGVVGGGYIAVELAGVLSELGSETTLICRGESVLRGFDNLITSTLMEEMQKAGLKFRGMSTPKAVVKEEGGLMVELEEGGREGPFDTLLLATGRSTAITNLGLEGAGIETDKAGYVQVDEYQNTNVGGVYALGDVCGRVQLTPMAIAAGRRLADRLFGSIPDAKADYDGVPTVVFSHPPIGTVGLTEQQAKEEHGEDNVKIYSSKFVNLFYGPWRLAPEEKPKTAMKLVCVGPEEKVVGLHVIGMGADEMLQGFAVAMKMGATKADFDACVALHPTAAEEFVTLAPWGLKGKRSR 605
            MLP VRGG  L LA+V+S+L++HVAHAFLP+P C+ +  SRL  LR+R S L A +S SSDS THFD+LVIG GSGGIASARRAASYG KV V+EK+ LGGTCVNVGCVPKKVMWNAAHVREI+ GAK+FGFD+DGH V FDWPMLKKARDDYV RLNGIYAKNL ASEVA++EGAASF+GPK+LR+GS +YTAEHILIAVGGQPRML IPGA+E AITSDGFF+L E PKRVGVVGGGYIAVELAGVL ELGS+TT+ICRG+ VLRGFD LI++TL+EEM+KAG+ F+  +TPKA+ KE  GL+VELEEGG  GPFDT+LLATGR TAI +LGL  AG+ETDK G V VDEYQNTNVGGVYALGDVCGRVQLTPMAIAAGRRLADRLFGS+P+AKADYD VPTVVFSHPPIGTVGLTE QAKEE+GE NV++YSSKFVNLFYGPWRLAPEEKPKTAMK+VCVG EE+VVGLHVIGMGADEMLQGFAVA+KMGATKADFDACVALHPTAAEE VTL+PWGL+GKRSR
Sbjct:    1 MLPFVRGGSVLFLALVLSVLLEHVAHAFLPLPNCVKRQTSRLSGLRSRHSFLKALAS-SSDS-THFDFLVIGAGSGGIASARRAASYGVKVAVVEKKALGGTCVNVGCVPKKVMWNAAHVREIMLGAKNFGFDVDGHDVGFDWPMLKKARDDYVSRLNGIYAKNLAASEVALLEGAASFSGPKSLRIGSKEYTAEHILIAVGGQPRMLDIPGAQEHAITSDGFFELAEQPKRVGVVGGGYIAVELAGVLHELGSQTTIICRGDGVLRGFDELISTTLVEEMKKAGMAFKHDATPKAIRKEAEGLIVELEEGGTVGPFDTVLLATGRVTAIDSLGLAEAGVETDKRGNVLVDEYQNTNVGGVYALGDVCGRVQLTPMAIAAGRRLADRLFGSLPEAKADYDDVPTVVFSHPPIGTVGLTEAQAKEEYGEGNVRVYSSKFVNLFYGPWRLAPEEKPKTAMKMVCVGEEERVVGLHVIGMGADEMLQGFAVAVKMGATKADFDACVALHPTAAEELVTLSPWGLRGKRSR 525          
The following BLAST results are available for this feature:
BLAST of NO01G04630.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM29411.11.200e-24580.65glutathione reductase [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G04630NO01G04630Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO01G04630.1NO01G04630.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO01G04630.1.cds1NO01G04630.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G04630.1.cds2NO01G04630.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G04630.1.cds3NO01G04630.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO01G04630.1 ID=NO01G04630.1|Name=NO01G04630.1|organism=Nannochloropsis oceanica|type=mRNA|length=2469bp
TTGCTGCTGTTGCGTGGACTGCTGCAGGGGGGAGTAAGGGATGGGGTGGA
GTGAGAGAAAAAAGATGGTCAGTGCGTGAAAATGCGTGCGATCGACGCAG
CGGGAGGAAGAAACGCTGTTGCAAGCACCAGGTTTCAACCGTGAAGCCGT
GATGTGTGGGCAGTGCGGATCTGTGGTTGCGTGCAGGCGAGAGTCTGCCA
GTGGTTGAAGACAAATGGTCAAGGTGCTTTGTTCTGCGGGCTGGTGCTTC
GACACTTTATCCAAAGCTACAAACTCCATCGAAATTGATACGCCTGACAG
TGACTCAACGCGCAGGAGCTTATCTGTCTTCCTATCCTTTGGTGGGGTGA
ATGGTCCAGAGCAAAGCGGGAATTTGGTGTGGTAAGTGGACGTACTGCAT
GGCAGGGACGCTGCGTTTGGCGATTCTATCAGAAGGCCTTTCGAGTGCCC
GCGTCCGCTCACACAACAGATTGCAACAAACTACACCAGCTCAAGCATAC
ACTGCCGGAGAGAGCGTTTGCGCCTAAGAAAACCACCTGCCTGTACCTAA
AGCGCGACCTTAGTACGAAAGATGCCTGCCATTATGACCACACAAAAGGC
ATGAGGCATGATATCGATCGTTCAAGCAATAAGCCGTCCGCCCGACCAAA
TGATTCCCGACCCTATTTTGTACGATTGGGACTTGCCCCACCCATTCGCA
AAGATGAGGCTTATCTGTATAGATTGTGTAGCATGTCGTCTATCACAGAC
CTCCAGTGTTTCTCTCCCATTATCACACAAGCAGCAACTCGGACCTCCCC
ACCCCAGTACTCTCCTCCCCTACCACCCGCAATGCTGCCACTCGTGCGCG
GCGGAGGGGCTTTGCTCCTTGCCGTGGTAATAAGCATTCTCGTCGACCAT
GTCGCCCATGCCTTCCTGCCAATGCCGCGATGCATTATGAAACACGCCTC
CCGCCTTCCAAAACTGCGCGCCCGCCGCTCCCTCCTGAGCGCCTCCTCCT
CTGCCAGTAGCGACAGTCCCACGCATTTCGACTACCTTGTCATTGGCGGA
GGCAGTGGTGGCATCGCTTCGGCCCGTCGTGCTGCGTCTTACGGCGCAAA
AGTCGGTGTGATTGAAAAGCAATACTTGGGTGGCACCTGTGTCAACGTAG
GGTGTGTGCCCAAGAAAGTCATGTGGAACGCGGCGCATGTCAGGGAAATA
CTGGCAGGGGCCAAACACTTTGGGTTTGATTTGGACGGGCATGGTGTACC
GTTCGATTGGCCGATGCTGAAGAAGGCCCGCGATGACTACGTCCAACGTC
TCAACGGCATCTACGCCAAGAATCTGGGCGCGTCGGAGGTGGCGATCATT
GAGGGCGCTGCCTCATTCGCCGGTCCCAAGACCCTCCGTGTGGGGAGCAC
TGACTACACCGCCGAGCATATCCTCATCGCAGTGGGAGGACAGCCCAGAA
TGCTGTCTATTCCGGGGGCGAAGGAATTTGCGATTACCAGTGACGGTTTT
TTTGATTTGCCTGAGATGCCGAAGAGAGTGGGAGTGGTAGGGGGCGGATA
CATCGCAGTAGAGCTGGCGGGAGTATTGAGTGAATTGGGCAGTGAGACGA
CGTTGATTTGTAGGGGGGAGTCGGTCTTGAGGGGCTTTGATAACTTGATC
ACCTCGACGCTGATGGAGGAGATGCAAAAGGCGGGATTGAAGTTCAGGGG
CATGTCGACGCCCAAGGCGGTGGTAAAGGAAGAGGGAGGGTTGATGGTGG
AGTTGGAGGAGGGAGGGAGGGAGGGTCCGTTTGATACGCTGTTGTTGGCG
ACAGGGAGATCCACGGCCATTACGAATTTGGGTTTGGAGGGGGCGGGGAT
TGAGACGGATAAGGCCGGCTACGTGCAGGTGGATGAGTATCAGAACACGA
ATGTGGGGGGTGTGTACGCGTTGGGGGACGTGTGTGGAAGAGTGCAGCTG
ACGCCAATGGCGATTGCGGCGGGGAGACGGTTGGCGGATCGATTGTTTGG
CTCGATCCCAGATGCGAAGGCGGATTATGATGGTGTCCCGACCGTGGTGT
TCTCGCACCCGCCCATTGGTACGGTGGGATTGACGGAGCAGCAGGCGAAG
GAGGAGCATGGAGAGGACAATGTGAAGATCTATAGCAGCAAGTTTGTGAA
TTTGTTTTACGGTCCCTGGCGACTTGCACCTGAGGAGAAGCCCAAGACGG
CGATGAAGCTTGTGTGCGTAGGACCGGAAGAGAAGGTGGTGGGCCTGCAC
GTGATAGGGATGGGGGCGGACGAGATGCTGCAGGGTTTTGCGGTCGCGAT
GAAGATGGGAGCCACCAAGGCCGACTTTGACGCGTGTGTGGCGTTGCACC
CGACGGCGGCGGAAGAGTTTGTGACATTGGCGCCGTGGGGGTTGAAAGGG
AAGAGGAGCAGGTGATTTGATGATTTGTGGGGGGGAGGGGAGGGAGGGAG
AAAGGAAGCAAGGCAGGAA
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protein sequence of NO01G04630.1

>NO01G04630.1-protein ID=NO01G04630.1-protein|Name=NO01G04630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=605bp
MRHDIDRSSNKPSARPNDSRPYFVRLGLAPPIRKDEAYLYRLCSMSSITD
LQCFSPIITQAATRTSPPQYSPPLPPAMLPLVRGGGALLLAVVISILVDH
VAHAFLPMPRCIMKHASRLPKLRARRSLLSASSSASSDSPTHFDYLVIGG
GSGGIASARRAASYGAKVGVIEKQYLGGTCVNVGCVPKKVMWNAAHVREI
LAGAKHFGFDLDGHGVPFDWPMLKKARDDYVQRLNGIYAKNLGASEVAII
EGAASFAGPKTLRVGSTDYTAEHILIAVGGQPRMLSIPGAKEFAITSDGF
FDLPEMPKRVGVVGGGYIAVELAGVLSELGSETTLICRGESVLRGFDNLI
TSTLMEEMQKAGLKFRGMSTPKAVVKEEGGLMVELEEGGREGPFDTLLLA
TGRSTAITNLGLEGAGIETDKAGYVQVDEYQNTNVGGVYALGDVCGRVQL
TPMAIAAGRRLADRLFGSIPDAKADYDGVPTVVFSHPPIGTVGLTEQQAK
EEHGEDNVKIYSSKFVNLFYGPWRLAPEEKPKTAMKLVCVGPEEKVVGLH
VIGMGADEMLQGFAVAMKMGATKADFDACVALHPTAAEEFVTLAPWGLKG
KRSR*
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mRNA from alignment at chr1:1221473..1224281-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO01G04630.1 ID=NO01G04630.1|Name=NO01G04630.1|organism=Nannochloropsis oceanica|type=mRNA|length=2809bp|location=Sequence derived from alignment at chr1:1221473..1224281- (Nannochloropsis oceanica)
TTGCTGCTGTTGCGTGGACTGCTGCAGGGGGGAGTAAGGGATGGGGTGGA GTGAGAGAAAAAAGATGGTCAGTGCGTGAAAATGCGTGCGATCGACGCAG CGGGAGGAAGAAACGCTGTTGCAAGCACCAGGTTTCAACCGTGAAGCCGT GATGTGTGGGCAGTGCGGATCTGTGGTTGCGTGCAGGCGAGAGTCTGCCA GTGGTTGAAGACAAATGGTCAAGGTGCTTTGTTCTGCGGGCTGGTGCTTC GACACTTTATCCAAAGCTACAAACTCCATCGAAATTGATACGCCTGACAG TGACTCAACGCGCAGGAGCTTATCTGTCTTCCTATCCTTTGGTGGGGTGA ATGGTCCAGAGCAAAGCGGGAATTTGGTGTGGTAAGTGGACGTACTGCAT GGCAGGGACGCTGCGTTTGGCGATTCTATCAGAAGGCCTTTCGAGTGCCC GCGTCCGCTCACACAACAGATTGCAACAAACTACACCAGCTCAAGCATAC ACTGCCGGAGAGAGCGTTTGCGCCTAAGAAAACCACCTGCCTGTACCTAA AGCGCGACCTTAGTACGAAAGATGCCTGCCATTATGACCACACAAAAGGC ATGAGGCATGATATCGATCGTTCAAGCAATAAGCCGTCCGCCCGACCAAA TGATTCCCGACCCTATTTTGTACGATTGGGACTTGCCCCACCCATTCGCA AAGATGAGGCTTATCTGTATAGATTGTGTAGCATGTCGTCTATCACAGAC CTCCAGTGTTTCTCTCCCATTATCACACAAGCAGCAACTCGGACCTCCCC ACCCCAGTACTCTCCTCCCCTACCACCCGCAATGCTGCCACTCGTGCGCG GCGGAGGGGCTTTGCTCCTTGCCGTGGTAATAAGCATTCTCGTCGACCAT GTCGCCCATGCCTTCCTGCCAATGCCGCGATGCATTATGGTAAGTTGATT TATTAAAGCATCGTTCCTTTCCTTCTAGAGGAAGAAGGTATCCCCTGTAT GTCTTCCGTCCTCATTATCCACAACGCCTGTGCTCTTCAATTGTGCGTCA TTTCTCTCACCAATTTTATCAAAGTCTCCATCACAATGCTTTCCTATCCC AATCTCCTCCTTTCTCGCCTTGCTACGACACAGAAACACGCCTCCCGCCT TCCAAAACTGCGCGCCCGCCGCTCCCTCCTGAGCGCCTCCTCCTCTGCCA GTAGCGACAGTCCCACGCATTTCGACTACCTTGTCATTGGCGGAGGCAGT GGTGGCATCGCTTCGGCCCGTCGTGCTGCGTCTTACGGCGCAAAAGTCGG TGTGATTGAAAAGCAATACTTGGGTGGCACCTGTGTCAACGTAGGGTGTG TGCCCAAGAAAGTCATGTGGAACGCGGCGCATGTCAGGGAAATACTGGCA GGGGCCAAACACTTTGGGTTTGATTTGGACGGGCATGGTGTACCGTTCGA TTGGCCGATGCTGAAGAAGGTAAGGGAGGGGGAAGGGAGAGGAGGGAGGG AGGGCGGGCGGGAGGACGGGCTCGAGGAAGGAAGTTAGGCGATGGTCAGG ATTAGCAGTAGATTCATTCATTGATCTCTCCCTCCCTTCCTCTCTCTCTT CCTCTCTTCACACAGGCCCGCGATGACTACGTCCAACGTCTCAACGGCAT CTACGCCAAGAATCTGGGCGCGTCGGAGGTGGCGATCATTGAGGGCGCTG CCTCATTCGCCGGTCCCAAGACCCTCCGTGTGGGGAGCACTGACTACACC GCCGAGCATATCCTCATCGCAGTGGGAGGACAGCCCAGAATGCTGTCTAT TCCGGGGGCGAAGGAATTTGCGATTACCAGTGACGGTTTTTTTGATTTGC CTGAGATGCCGAAGAGAGTGGGAGTGGTAGGGGGCGGATACATCGCAGTA GAGCTGGCGGGAGTATTGAGTGAATTGGGCAGTGAGACGACGTTGATTTG TAGGGGGGAGTCGGTCTTGAGGGGCTTTGATAACTTGATCACCTCGACGC TGATGGAGGAGATGCAAAAGGCGGGATTGAAGTTCAGGGGCATGTCGACG CCCAAGGCGGTGGTAAAGGAAGAGGGAGGGTTGATGGTGGAGTTGGAGGA GGGAGGGAGGGAGGGTCCGTTTGATACGCTGTTGTTGGCGACAGGGAGAT CCACGGCCATTACGAATTTGGGTTTGGAGGGGGCGGGGATTGAGACGGAT AAGGCCGGCTACGTGCAGGTGGATGAGTATCAGAACACGAATGTGGGGGG TGTGTACGCGTTGGGGGACGTGTGTGGAAGAGTGCAGCTGACGCCAATGG CGATTGCGGCGGGGAGACGGTTGGCGGATCGATTGTTTGGCTCGATCCCA GATGCGAAGGCGGATTATGATGGTGTCCCGACCGTGGTGTTCTCGCACCC GCCCATTGGTACGGTGGGATTGACGGAGCAGCAGGCGAAGGAGGAGCATG GAGAGGACAATGTGAAGATCTATAGCAGCAAGTTTGTGAATTTGTTTTAC GGTCCCTGGCGACTTGCACCTGAGGAGAAGCCCAAGACGGCGATGAAGCT TGTGTGCGTAGGACCGGAAGAGAAGGTGGTGGGCCTGCACGTGATAGGGA TGGGGGCGGACGAGATGCTGCAGGGTTTTGCGGTCGCGATGAAGATGGGA GCCACCAAGGCCGACTTTGACGCGTGTGTGGCGTTGCACCCGACGGCGGC GGAAGAGTTTGTGACATTGGCGCCGTGGGGGTTGAAAGGGAAGAGGAGCA GGTGATTTGATGATTTGTGGGGGGGAGGGGAGGGAGGGAGAAAGGAAGCA AGGCAGGAA
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Coding sequence (CDS) from alignment at chr1:1221473..1224281-

>NO01G04630.1 ID=NO01G04630.1|Name=NO01G04630.1|organism=Nannochloropsis oceanica|type=CDS|length=1815bp|location=Sequence derived from alignment at chr1:1221473..1224281- (Nannochloropsis oceanica)
ATGAGGCATGATATCGATCGTTCAAGCAATAAGCCGTCCGCCCGACCAAA
TGATTCCCGACCCTATTTTGTACGATTGGGACTTGCCCCACCCATTCGCA
AAGATGAGGCTTATCTGTATAGATTGTGTAGCATGTCGTCTATCACAGAC
CTCCAGTGTTTCTCTCCCATTATCACACAAGCAGCAACTCGGACCTCCCC
ACCCCAGTACTCTCCTCCCCTACCACCCGCAATGCTGCCACTCGTGCGCG
GCGGAGGGGCTTTGCTCCTTGCCGTGGTAATAAGCATTCTCGTCGACCAT
GTCGCCCATGCCTTCCTGCCAATGCCGCGATGCATTATGAAACACGCCTC
CCGCCTTCCAAAACTGCGCGCCCGCCGCTCCCTCCTGAGCGCCTCCTCCT
CTGCCAGTAGCGACAGTCCCACGCATTTCGACTACCTTGTCATTGGCGGA
GGCAGTGGTGGCATCGCTTCGGCCCGTCGTGCTGCGTCTTACGGCGCAAA
AGTCGGTGTGATTGAAAAGCAATACTTGGGTGGCACCTGTGTCAACGTAG
GGTGTGTGCCCAAGAAAGTCATGTGGAACGCGGCGCATGTCAGGGAAATA
CTGGCAGGGGCCAAACACTTTGGGTTTGATTTGGACGGGCATGGTGTACC
GTTCGATTGGCCGATGCTGAAGAAGGCCCGCGATGACTACGTCCAACGTC
TCAACGGCATCTACGCCAAGAATCTGGGCGCGTCGGAGGTGGCGATCATT
GAGGGCGCTGCCTCATTCGCCGGTCCCAAGACCCTCCGTGTGGGGAGCAC
TGACTACACCGCCGAGCATATCCTCATCGCAGTGGGAGGACAGCCCAGAA
TGCTGTCTATTCCGGGGGCGAAGGAATTTGCGATTACCAGTGACGGTTTT
TTTGATTTGCCTGAGATGCCGAAGAGAGTGGGAGTGGTAGGGGGCGGATA
CATCGCAGTAGAGCTGGCGGGAGTATTGAGTGAATTGGGCAGTGAGACGA
CGTTGATTTGTAGGGGGGAGTCGGTCTTGAGGGGCTTTGATAACTTGATC
ACCTCGACGCTGATGGAGGAGATGCAAAAGGCGGGATTGAAGTTCAGGGG
CATGTCGACGCCCAAGGCGGTGGTAAAGGAAGAGGGAGGGTTGATGGTGG
AGTTGGAGGAGGGAGGGAGGGAGGGTCCGTTTGATACGCTGTTGTTGGCG
ACAGGGAGATCCACGGCCATTACGAATTTGGGTTTGGAGGGGGCGGGGAT
TGAGACGGATAAGGCCGGCTACGTGCAGGTGGATGAGTATCAGAACACGA
ATGTGGGGGGTGTGTACGCGTTGGGGGACGTGTGTGGAAGAGTGCAGCTG
ACGCCAATGGCGATTGCGGCGGGGAGACGGTTGGCGGATCGATTGTTTGG
CTCGATCCCAGATGCGAAGGCGGATTATGATGGTGTCCCGACCGTGGTGT
TCTCGCACCCGCCCATTGGTACGGTGGGATTGACGGAGCAGCAGGCGAAG
GAGGAGCATGGAGAGGACAATGTGAAGATCTATAGCAGCAAGTTTGTGAA
TTTGTTTTACGGTCCCTGGCGACTTGCACCTGAGGAGAAGCCCAAGACGG
CGATGAAGCTTGTGTGCGTAGGACCGGAAGAGAAGGTGGTGGGCCTGCAC
GTGATAGGGATGGGGGCGGACGAGATGCTGCAGGGTTTTGCGGTCGCGAT
GAAGATGGGAGCCACCAAGGCCGACTTTGACGCGTGTGTGGCGTTGCACC
CGACGGCGGCGGAAGAGTTTGTGACATTGGCGCCGTGGGGGTTGAAAGGG
AAGAGGAGCAGGTGA
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Synonyms
Publications