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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr1 | genome | chr1:1168690..1172225 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO01G04400.1 vs.
Match: XP_005855481.1 (protein kinase [Nannochloropsis gaditana CCMP526]; EKU20883.1 protein kinase [Nannochloropsis gaditana CCMP526]; EWM29374.1 protein kinase [Nannochloropsis gaditana]) HSP 1 Score: 467.6 bits (1202), Expect = 3.700e-128 Identity = 258/391 (65.98%), Postives = 296/391 (75.70%), Query Frame = 0
Query: 1 MAECVQPIETEVPSHAPSPALLKELEETCGDGLSSPGH-TFFAASPPSRVATPGLIQPTSCASAAEHPALDVVLGPFAVKETCVVLDWDDTLFPSSFVDRKKLIHARGLDDLPVELQRGFAELEKAATRLVTTAVGFGTVLIITNAQTGWVELCVSKFMPDMMAVLDASVRVVSARSSFERYFPGDPLCWKAAAFAHELHQLQKSLGTPLKNILSFGDSMEERTAVKIAAGQLQ-SRAKSIKFLDAPSPRQLHQQIEVVTDCLEWIWRHNGDLDVVLTLEQEQQQQQQQQQQ-YHHLGESQQSSLSQHQPQPRPISTLTPLSVATPSIEVLEKTAKRESTDRPAIKGSFEGNKTIAMPVVVTPLGSDKGEAGALPEAMHVVTDEEESEEEN 389
MAECVQ I+ ++ HA S ALL+ELEE GDGL PG T F +S PS +A PGLIQ C++AAE+PA DVVLGP+AV+ETCV+LDWDDTLFPSSFVDRKKLIH RGLD+LP ELQRGFAELEKAA L+T A +GTVLIITNAQTGWVELCVSKFMP +MAVL SVRVVSARS++ERYFPGDPLCWK+AAFAHEL QLQ S G PLKN+LSFGDSMEERTAV+IAAG LQ +RAKS+KFLDAPSPR+LHQQIEVVTDCLEWIWRHNG LDVVLTLEQE+ Q+ + GE PQ R +TL+P+SV +E +D G + K+ A P+VVTP G D+ L +AMHVVTDEEESE+EN
Sbjct: 1 MAECVQHIDADISPHAASDALLRELEEAGGDGLGGPGTPTLFTSSSPSHIAAPGLIQSKCCSAAAENPAADVVLGPYAVQETCVILDWDDTLFPSSFVDRKKLIHCRGLDELPSELQRGFAELEKAAAGLITAATKYGTVLIITNAQTGWVELCVSKFMPGLMAVLGISVRVVSARSNYERYFPGDPLCWKSAAFAHELTQLQNSQGHPLKNLLSFGDSMEERTAVQIAAGHLQGARAKSVKFLDAPSPRELHQQIEVVTDCLEWIWRHNGALDVVLTLEQERHDPSQKPTDGTNKTGEHTSGQPQLQPPQSRRATTLSPISVPAS----MEGDLNTPGSD----TGREDKFKSGAAPLVVTPSGVDEIGELELADAMHVVTDEEESEDEN 383
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO01G04400.1 ID=NO01G04400.1|Name=NO01G04400.1|organism=Nannochloropsis oceanica|type=mRNA|length=3536bp AGGCTTCACCAAGGGCTTGCACGTGTGGCTCCGGCGAGCCTGCCGGGCGC GCATCTTCATATATACATGCTCATTTGTTATCTTTTCATCGCAAATCAGT ATTTGTAAAAAATGCACTCGTATGGCGTTTGCGGCGTGAAATTCTCTGAG TAATGAAGCCATCTGCTGCTTGCCTTATCTGATGCCCGTCCTTGTTGTCA AGCAGCGATTGCCTCTTCTCAAGAGAATTTCTGATGATCAGAGGACTTCA CCCCCAATTGTTGCTTTATGTCAGTAAAGTGCAAATTGTGCCTTCCCTCA TAGCCTGTGTGATCGTGAATGTCGAGGTGCACTGGGCGGCGGGACGCGGC TCCTTTCTCCCAGCCACGTGCGTTTTCGAGAACGTCGACTCGAGAAGGCA AGATACAACACTGTCTTGCGTGCAAGTGCTGTTCAATCATGATCGTCTTG TCAACTGGCGCCTCACCACCCAGCGACATATCACACGCCCACACGCTGCT CATAGATGTGGGCAATGCGTCGCAGGTGGACAGATTAGCGGCAGTGGTGA CTGACGGCGGGGAGGATGCCATCATGCCAGGCTCCCAGCAGCTGTTGGCT CTCTTTTGGGCTAGAGAGAAGAAATCAGCCCCCTTTGTAAAGCAAGCACT CACACGCCGCCCTTCCCACCCACCCACCGCTTGTCACAGGCAGGGCGCTC AGTGTAGAAGCCAATTGTTTTAAGCCGCGCCTTTTCCGACCCGCAACTGT ACCACCAAGGCTCCACCTCGAGGTCAAGACAACAAAACAACATCACTCCT CCCCTCATCAAGCACGTACGTGTGTCCTCCCCCTCCCCTCGGAGAGACCA AATACCACCGGTACTTTTCACTGCAGCACCTCTAGCACCAGCTCAACCAC TGCCTGAAACCATGGCCGAGTGCGTCCAACCCATCGAGACGGAAGTCCCC TCCCACGCTCCCTCTCCCGCTCTACTCAAAGAGCTGGAAGAAACCTGCGG CGATGGCCTAAGCAGCCCAGGGCACACCTTTTTCGCTGCCTCTCCCCCCT CCCGCGTCGCTACTCCAGGCCTTATTCAACCCACTAGCTGCGCATCGGCC GCTGAACACCCGGCTTTGGACGTGGTGTTGGGACCCTTCGCCGTTAAGGA AACCTGCGTCGTCCTTGACTGGGATGACACTTTGTTCCCTTCCTCTTTTG TCGACCGCAAAAAGCTGATTCACGCGCGGGGACTAGATGACCTGCCCGTG GAGCTTCAACGGGGTTTTGCTGAATTGGAAAAGGCGGCGACACGCTTGGT CACGACGGCTGTCGGTTTTGGCACCGTCCTCATCATCACCAACGCCCAAA CAGGTTGGGTCGAGCTGTGCGTGTCCAAGTTCATGCCTGACATGATGGCT GTGCTTGATGCTTCGGTGCGGGTGGTTTCCGCGCGTTCATCGTTCGAGAG ATATTTTCCCGGCGATCCCCTCTGTTGGAAAGCCGCCGCCTTTGCCCACG AACTCCACCAGCTCCAAAAAAGCCTCGGCACCCCCCTTAAGAACATCTTG TCCTTCGGCGACTCCATGGAAGAACGGACCGCAGTTAAAATTGCAGCCGG TCAACTTCAATCCCGTGCGAAGTCGATTAAGTTTCTGGATGCTCCCTCCC CGCGGCAGTTGCACCAGCAGATCGAAGTCGTCACGGACTGTCTGGAGTGG ATCTGGCGGCATAATGGCGACTTAGACGTCGTCCTCACCCTCGAGCAAGA ACAACAACAACAGCAGCAGCAGCAGCAGCAGTATCATCATCTTGGAGAAA GTCAGCAATCATCTTTGTCCCAGCACCAGCCGCAACCGCGGCCAATCTCG ACCTTAACCCCCTTATCAGTGGCGACGCCCTCTATTGAAGTCTTGGAGAA GACAGCCAAGAGAGAGTCGACCGATAGACCTGCGATTAAAGGGTCCTTCG AAGGAAATAAAACAATCGCGATGCCTGTTGTGGTGACGCCGCTGGGAAGC GACAAAGGAGAGGCTGGAGCGCTCCCTGAGGCAATGCATGTGGTGACCGA CGAGGAGGAGAGCGAGGAGGAGAACTAATAAGCAGCAGTAGCAGCCGTAG CTTCTCTTCCAACGCGTATTCTTATTACAAGAGGGCCGTATATTCCCTCG TTCATGTTCCTTGTCCGTAACCTCCGTGTCCAATCGCCGTCATGACGTCT AGTCTAACTAGTCTATACCATGCGTGCCCTTCTCTTGTGGGAGGGACAGT TCCATATTTTATGTAGATGGGGAGATGATTAATTATAATCTATGCTGAGT GTACGGGGGAAGGATCAATGGGGAAGACCGCCTCTCCAAACCATCACCAC GAGTCATTAAGTCGAATTTTGTTTTATTTGACCCATAGAATAGATAGATC CCCCCACCCGTGCGCGAGCTCAAAGGTAGCCAGAGACAATTGAAAACGAT GTGTTATTTATATGTGGCGTACTTAGAGTTTGTACCGATCGTATTGAAAG GGGCATACATATCCACCCCACTGTATAGAGAGGGATGATGACAGAGAGGA AAACGACCACCATGAGATGCGAGCGAGTTTTAACCGAGATTTTGGGCGAT AAAGAGATCAACTCTTCCCGAGAGGGCTCAATCAATCACAAAAGAGACAA CACAAAAAGGAGGAAAACCCACATAATTATGTGTGTACGATCTTGGCAGA GAGAGTATGGAAATATAAGGTCCGGAAGAGAAGGGATAGCGAAGAATAGG AGAGAGACAGCAAAAGCAACGGCAAACGTCGTTTGTGCATGTTTTACTCT CCCTCTGAATCCCTTCCTATTCCCCTCCCTCCCCTGTCGAAGACCAATCT TTGTGAGTAATTTGTGAGTAAATTAGATTGACCTGGGAGCGAACGGCAGG AAGGGTATACCAACAGAGATGCAGCAGCACAGCAGTAGCGGCAGCAGTGC AGCAGAAGTAAACGTTTTATCATTATGTGTGTACATACATCAGCACTGAC ATGCAAGGCAAGCAAGCGAGACGCGAAGTTGTCGGTAGCCGTAGGAGGAG GTGGCTAGAGTAAAAGAGATCAAAAACACAAGAATTGAAAAAGCGACGAC GACGCAGCAACACCCGGAACAAGAATGGATGGTAGAGATGATCGATCGAA TATAAAGGCGCAGAATTATATCACTAAGCATGCAAATTGCAAAGAAGGAG GATGAGTACCCATGGACCTGAAGGGAAAGAGACTCAGAGAGTTGCGTGTC CTCACCACCAACATTGTTGGAGGGAGGGGGGGACGCCGCAACCACTACCA CCACAGAACACTAGAGAACGCTACCAACGAGATGTAATAACTGTCATCGA TTCATCGGCAAACAGAACGAAAAGAGATGGATGAAGAAACGAGAGAAAAC GGATAAAGGAGCAGAGATGTAGCGGCGGGTGTGTAGAAAGGCAAGACACT TACCATACCCGGGACCGTGGAGGTATAACAACAACGATGAAACAAAAAGA TTTAAAGAAAGATTTAACACATAAGACTTGATAAGA back to topprotein sequence of NO01G04400.1 >NO01G04400.1-protein ID=NO01G04400.1-protein|Name=NO01G04400.1|organism=Nannochloropsis oceanica|type=polypeptide|length=389bp MAECVQPIETEVPSHAPSPALLKELEETCGDGLSSPGHTFFAASPPSRVA TPGLIQPTSCASAAEHPALDVVLGPFAVKETCVVLDWDDTLFPSSFVDRK KLIHARGLDDLPVELQRGFAELEKAATRLVTTAVGFGTVLIITNAQTGWV ELCVSKFMPDMMAVLDASVRVVSARSSFERYFPGDPLCWKAAAFAHELHQ LQKSLGTPLKNILSFGDSMEERTAVKIAAGQLQSRAKSIKFLDAPSPRQL HQQIEVVTDCLEWIWRHNGDLDVVLTLEQEQQQQQQQQQQYHHLGESQQS SLSQHQPQPRPISTLTPLSVATPSIEVLEKTAKRESTDRPAIKGSFEGNK TIAMPVVVTPLGSDKGEAGALPEAMHVVTDEEESEEEN* back to topmRNA from alignment at chr1:1168690..1172225- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO01G04400.1 ID=NO01G04400.1|Name=NO01G04400.1|organism=Nannochloropsis oceanica|type=mRNA|length=3536bp|location=Sequence derived from alignment at chr1:1168690..1172225- (Nannochloropsis oceanica) AGGCTTCACCAAGGGCTTGCACGTGTGGCTCCGGCGAGCCTGCCGGGCGC
GCATCTTCATATATACATGCTCATTTGTTATCTTTTCATCGCAAATCAGT
ATTTGTAAAAAATGCACTCGTATGGCGTTTGCGGCGTGAAATTCTCTGAG
TAATGAAGCCATCTGCTGCTTGCCTTATCTGATGCCCGTCCTTGTTGTCA
AGCAGCGATTGCCTCTTCTCAAGAGAATTTCTGATGATCAGAGGACTTCA
CCCCCAATTGTTGCTTTATGTCAGTAAAGTGCAAATTGTGCCTTCCCTCA
TAGCCTGTGTGATCGTGAATGTCGAGGTGCACTGGGCGGCGGGACGCGGC
TCCTTTCTCCCAGCCACGTGCGTTTTCGAGAACGTCGACTCGAGAAGGCA
AGATACAACACTGTCTTGCGTGCAAGTGCTGTTCAATCATGATCGTCTTG
TCAACTGGCGCCTCACCACCCAGCGACATATCACACGCCCACACGCTGCT
CATAGATGTGGGCAATGCGTCGCAGGTGGACAGATTAGCGGCAGTGGTGA
CTGACGGCGGGGAGGATGCCATCATGCCAGGCTCCCAGCAGCTGTTGGCT
CTCTTTTGGGCTAGAGAGAAGAAATCAGCCCCCTTTGTAAAGCAAGCACT
CACACGCCGCCCTTCCCACCCACCCACCGCTTGTCACAGGCAGGGCGCTC
AGTGTAGAAGCCAATTGTTTTAAGCCGCGCCTTTTCCGACCCGCAACTGT
ACCACCAAGGCTCCACCTCGAGGTCAAGACAACAAAACAACATCACTCCT
CCCCTCATCAAGCACGTACGTGTGTCCTCCCCCTCCCCTCGGAGAGACCA
AATACCACCGGTACTTTTCACTGCAGCACCTCTAGCACCAGCTCAACCAC
TGCCTGAAACCATGGCCGAGTGCGTCCAACCCATCGAGACGGAAGTCCCC
TCCCACGCTCCCTCTCCCGCTCTACTCAAAGAGCTGGAAGAAACCTGCGG
CGATGGCCTAAGCAGCCCAGGGCACACCTTTTTCGCTGCCTCTCCCCCCT
CCCGCGTCGCTACTCCAGGCCTTATTCAACCCACTAGCTGCGCATCGGCC
GCTGAACACCCGGCTTTGGACGTGGTGTTGGGACCCTTCGCCGTTAAGGA
AACCTGCGTCGTCCTTGACTGGGATGACACTTTGTTCCCTTCCTCTTTTG
TCGACCGCAAAAAGCTGATTCACGCGCGGGGACTAGATGACCTGCCCGTG
GAGCTTCAACGGGGTTTTGCTGAATTGGAAAAGGCGGCGACACGCTTGGT
CACGACGGCTGTCGGTTTTGGCACCGTCCTCATCATCACCAACGCCCAAA
CAGGTTGGGTCGAGCTGTGCGTGTCCAAGTTCATGCCTGACATGATGGCT
GTGCTTGATGCTTCGGTGCGGGTGGTTTCCGCGCGTTCATCGTTCGAGAG
ATATTTTCCCGGCGATCCCCTCTGTTGGAAAGCCGCCGCCTTTGCCCACG
AACTCCACCAGCTCCAAAAAAGCCTCGGCACCCCCCTTAAGAACATCTTG
TCCTTCGGCGACTCCATGGAAGAACGGACCGCAGTTAAAATTGCAGCCGG
TCAACTTCAATCCCGTGCGAAGTCGATTAAGTTTCTGGATGCTCCCTCCC
CGCGGCAGTTGCACCAGCAGATCGAAGTCGTCACGGACTGTCTGGAGTGG
ATCTGGCGGCATAATGGCGACTTAGACGTCGTCCTCACCCTCGAGCAAGA
ACAACAACAACAGCAGCAGCAGCAGCAGCAGTATCATCATCTTGGAGAAA
GTCAGCAATCATCTTTGTCCCAGCACCAGCCGCAACCGCGGCCAATCTCG
ACCTTAACCCCCTTATCAGTGGCGACGCCCTCTATTGAAGTCTTGGAGAA
GACAGCCAAGAGAGAGTCGACCGATAGACCTGCGATTAAAGGGTCCTTCG
AAGGAAATAAAACAATCGCGATGCCTGTTGTGGTGACGCCGCTGGGAAGC
GACAAAGGAGAGGCTGGAGCGCTCCCTGAGGCAATGCATGTGGTGACCGA
CGAGGAGGAGAGCGAGGAGGAGAACTAATAAGCAGCAGTAGCAGCCGTAG
CTTCTCTTCCAACGCGTATTCTTATTACAAGAGGGCCGTATATTCCCTCG
TTCATGTTCCTTGTCCGTAACCTCCGTGTCCAATCGCCGTCATGACGTCT
AGTCTAACTAGTCTATACCATGCGTGCCCTTCTCTTGTGGGAGGGACAGT
TCCATATTTTATGTAGATGGGGAGATGATTAATTATAATCTATGCTGAGT
GTACGGGGGAAGGATCAATGGGGAAGACCGCCTCTCCAAACCATCACCAC
GAGTCATTAAGTCGAATTTTGTTTTATTTGACCCATAGAATAGATAGATC
CCCCCACCCGTGCGCGAGCTCAAAGGTAGCCAGAGACAATTGAAAACGAT
GTGTTATTTATATGTGGCGTACTTAGAGTTTGTACCGATCGTATTGAAAG
GGGCATACATATCCACCCCACTGTATAGAGAGGGATGATGACAGAGAGGA
AAACGACCACCATGAGATGCGAGCGAGTTTTAACCGAGATTTTGGGCGAT
AAAGAGATCAACTCTTCCCGAGAGGGCTCAATCAATCACAAAAGAGACAA
CACAAAAAGGAGGAAAACCCACATAATTATGTGTGTACGATCTTGGCAGA
GAGAGTATGGAAATATAAGGTCCGGAAGAGAAGGGATAGCGAAGAATAGG
AGAGAGACAGCAAAAGCAACGGCAAACGTCGTTTGTGCATGTTTTACTCT
CCCTCTGAATCCCTTCCTATTCCCCTCCCTCCCCTGTCGAAGACCAATCT
TTGTGAGTAATTTGTGAGTAAATTAGATTGACCTGGGAGCGAACGGCAGG
AAGGGTATACCAACAGAGATGCAGCAGCACAGCAGTAGCGGCAGCAGTGC
AGCAGAAGTAAACGTTTTATCATTATGTGTGTACATACATCAGCACTGAC
ATGCAAGGCAAGCAAGCGAGACGCGAAGTTGTCGGTAGCCGTAGGAGGAG
GTGGCTAGAGTAAAAGAGATCAAAAACACAAGAATTGAAAAAGCGACGAC
GACGCAGCAACACCCGGAACAAGAATGGATGGTAGAGATGATCGATCGAA
TATAAAGGCGCAGAATTATATCACTAAGCATGCAAATTGCAAAGAAGGAG
GATGAGTACCCATGGACCTGAAGGGAAAGAGACTCAGAGAGTTGCGTGTC
CTCACCACCAACATTGTTGGAGGGAGGGGGGGACGCCGCAACCACTACCA
CCACAGAACACTAGAGAACGCTACCAACGAGATGTAATAACTGTCATCGA
TTCATCGGCAAACAGAACGAAAAGAGATGGATGAAGAAACGAGAGAAAAC
GGATAAAGGAGCAGAGATGTAGCGGCGGGTGTGTAGAAAGGCAAGACACT
TACCATACCCGGGACCGTGGAGGTATAACAACAACGATGAAACAAAAAGA
TTTAAAGAAAGATTTAACACATAAGACTTGATAAGA back to topCoding sequence (CDS) from alignment at chr1:1168690..1172225- >NO01G04400.1 ID=NO01G04400.1|Name=NO01G04400.1|organism=Nannochloropsis oceanica|type=CDS|length=1167bp|location=Sequence derived from alignment at chr1:1168690..1172225- (Nannochloropsis oceanica) ATGGCCGAGTGCGTCCAACCCATCGAGACGGAAGTCCCCTCCCACGCTCC CTCTCCCGCTCTACTCAAAGAGCTGGAAGAAACCTGCGGCGATGGCCTAA GCAGCCCAGGGCACACCTTTTTCGCTGCCTCTCCCCCCTCCCGCGTCGCT ACTCCAGGCCTTATTCAACCCACTAGCTGCGCATCGGCCGCTGAACACCC GGCTTTGGACGTGGTGTTGGGACCCTTCGCCGTTAAGGAAACCTGCGTCG TCCTTGACTGGGATGACACTTTGTTCCCTTCCTCTTTTGTCGACCGCAAA AAGCTGATTCACGCGCGGGGACTAGATGACCTGCCCGTGGAGCTTCAACG GGGTTTTGCTGAATTGGAAAAGGCGGCGACACGCTTGGTCACGACGGCTG TCGGTTTTGGCACCGTCCTCATCATCACCAACGCCCAAACAGGTTGGGTC GAGCTGTGCGTGTCCAAGTTCATGCCTGACATGATGGCTGTGCTTGATGC TTCGGTGCGGGTGGTTTCCGCGCGTTCATCGTTCGAGAGATATTTTCCCG GCGATCCCCTCTGTTGGAAAGCCGCCGCCTTTGCCCACGAACTCCACCAG CTCCAAAAAAGCCTCGGCACCCCCCTTAAGAACATCTTGTCCTTCGGCGA CTCCATGGAAGAACGGACCGCAGTTAAAATTGCAGCCGGTCAACTTCAAT CCCGTGCGAAGTCGATTAAGTTTCTGGATGCTCCCTCCCCGCGGCAGTTG CACCAGCAGATCGAAGTCGTCACGGACTGTCTGGAGTGGATCTGGCGGCA TAATGGCGACTTAGACGTCGTCCTCACCCTCGAGCAAGAACAACAACAAC AGCAGCAGCAGCAGCAGCAGTATCATCATCTTGGAGAAAGTCAGCAATCA TCTTTGTCCCAGCACCAGCCGCAACCGCGGCCAATCTCGACCTTAACCCC CTTATCAGTGGCGACGCCCTCTATTGAAGTCTTGGAGAAGACAGCCAAGA GAGAGTCGACCGATAGACCTGCGATTAAAGGGTCCTTCGAAGGAAATAAA ACAATCGCGATGCCTGTTGTGGTGACGCCGCTGGGAAGCGACAAAGGAGA GGCTGGAGCGCTCCCTGAGGCAATGCATGTGGTGACCGACGAGGAGGAGA GCGAGGAGGAGAACTAA back to top
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