NO01G04020.1, NO01G04020.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO01G04020.1
Unique NameNO01G04020.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2127
Alignment locationchr1:1075443..1077569 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1075443..1077569 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO01G04020.1 vs.
Match: EWM29335.1 (acylaminoacyl peptidase [Nannochloropsis gaditana])

HSP 1 Score: 1176.4 bits (3042), Expect = 0.000e+0
Identity = 604/714 (84.59%), Postives = 641/714 (89.78%), Query Frame = 0
Query:    1 MTPSTSTASFSAPSRTASFLLAAAAAACCA-----SSSLAYTMMSTATYSRTRPSINPYNAGGSSVDSGRRPGGVEYNPFRPQPKGGVGGSLPPLQQELPELTPLPKLACSMDKIDEYRAEVEKVQGLIQEALREGDMPKARALYYGPLQDALTMDPLYSLQTKLGKAKGGKEKAFLKSLRDLMQRGNTRFMMDTNQIAVLHKGGNGLDLVEGQLKYLGPAKKTVETKWKPESLASMLEEVAEEIATRPPPVPSTSTGFGGRQRKNVPGGNAAAAAAAAAAAATNQGSAASSAGSS-EMPYAAQGEPGTSGGTPGDATQKQFQMPTWSPDGQFLAFTELYLNANGVDTCCLVVYDVRLGREVARKTLPNAPHMIQFMPDSDTIIYLQNQHDNISLCSMVSVRELRSGHEQERVIDEGMPLFFATSKYNSARYSLVMNNGKRNGLYRYLGDMTLPRKAWKQLATHERKFRSPEVASTGLQDSVIFVMDNYLVAASVDGQYRKNICRVQGFCTLAVSPNGKHIAVMEEDGATGFYQMSIISGRDATNPYGGTEYVQKTLPIQNVVASFYFSPDSQKLLLMVTTSPSHEFSVTRNTMNLGVSLTCKWDVYMLETGEVRSYGIFNPRPYQLKAFIPFFDQYRNSLSPWSPDSQAFCYCQREGAFIQRLQKTAVPEGLKKEMDRIRRGKPGLIFLPDIDDQSSAYALGADLEVLTWSWN 709
            M  ++  AS S  +R      AA     C        S +   MSTATYSR+RPSINPY  GG  V+SGR+PGGVEYNPFRP P+GG  GSLPP+QQ L ELTPLPKLACSMDKIDEYR EVE+VQ  IQEALREGDMPKARALYYGPLQDAL +DPLYSLQ +LGKAKG KEKAF K LRDLMQRGNTRF+M TNQIAVLHKGGNGLDLVEGQLKYLGP+KK+VETKWKPESLA+MLEEVAEEIATRPPP PSTSTGFGGRQRKNVPGGN AAAAAAAAA++  QG+ + +AG+S EMPYA Q +  TSG    + TQKQFQMPTWSPDG++LAFTELYLNANGVDTCCLVVY+V+ G+EVARKTLPNAPHMIQFMPDSD IIYLQNQHDNIS+CSMVSVREL SG E ERVIDEGMPLFFATSKYNS RYSLVMNNGKRNGLYRYLGDMTLPRKAWKQLATHERKFRSPEVASTGLQDSVIFVMDNYLVAASVDG+YRKNICRVQGFCTLAVSPNGKHIA+MEEDGATGFY+MSIISGRDATNPYGGT YVQKTLPI NVVASFYFSPDSQKLLLMVTTSPSHEFSVTRNTMNLGVSLTCKWDVYML +GEVRSYG+FNPRPYQLKAFIPFFDQYRNSLSPWSPDSQAFCYCQREGAFIQRLQKTAVPEGLKKEMDRIRRGKPGLIFLPDIDD+SSAYALGADLEVLTWSW+
Sbjct:    1 MKTASDRASISRRARLLFTTTAACGLTLCPLVGAYHPSSSTIRMSTATYSRSRPSINPYGVGGGGVESGRKPGGVEYNPFRPTPEGGQRGSLPPMQQGLEELTPLPKLACSMDKIDEYRVEVERVQSRIQEALREGDMPKARALYYGPLQDALNLDPLYSLQKRLGKAKGKKEKAFFKVLRDLMQRGNTRFLMSTNQIAVLHKGGNGLDLVEGQLKYLGPSKKSVETKWKPESLATMLEEVAEEIATRPPPPPSTSTGFGGRQRKNVPGGN-AAAAAAAAASSLQQGTGSGTAGASGEMPYATQ-DASTSGAE--EKTQKQFQMPTWSPDGRYLAFTELYLNANGVDTCCLVVYNVKEGKEVARKTLPNAPHMIQFMPDSDAIIYLQNQHDNISVCSMVSVRELMSGQEVERVIDEGMPLFFATSKYNSDRYSLVMNNGKRNGLYRYLGDMTLPRKAWKQLATHERKFRSPEVASTGLQDSVIFVMDNYLVAASVDGRYRKNICRVQGFCTLAVSPNGKHIALMEEDGATGFYKMSIISGRDATNPYGGTAYVQKTLPINNVVASFYFSPDSQKLLLMVTTSPSHEFSVTRNTMNLGVSLTCKWDVYMLGSGEVRSYGMFNPRPYQLKAFIPFFDQYRNSLSPWSPDSQAFCYCQREGAFIQRLQKTAVPEGLKKEMDRIRRGKPGLIFLPDIDDESSAYALGADLEVLTWSWS 710          
The following BLAST results are available for this feature:
BLAST of NO01G04020.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM29335.10.000e+084.59acylaminoacyl peptidase [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G04020NO01G04020Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO01G04020.1NO01G04020.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO01G04020.1.cds1NO01G04020.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO01G04020.1 ID=NO01G04020.1|Name=NO01G04020.1|organism=Nannochloropsis oceanica|type=mRNA|length=2127bp
ATGACGCCCTCTACCAGCACTGCATCTTTCTCCGCTCCTTCAAGAACGGC
GTCTTTCCTTCTCGCCGCCGCCGCCGCCGCCTGCTGCGCCTCCTCCTCCC
TGGCGTACACCATGATGTCAACGGCCACCTACTCCCGCACCCGGCCCTCT
ATCAACCCGTACAACGCGGGGGGCAGCAGCGTTGACAGTGGCCGTCGCCC
CGGTGGGGTTGAGTACAACCCATTCCGGCCTCAGCCCAAGGGAGGGGTTG
GTGGCTCCCTGCCGCCTCTGCAGCAGGAGCTGCCTGAGCTGACGCCCCTG
CCGAAGCTTGCTTGTTCGATGGACAAGATCGATGAATACAGAGCGGAGGT
AGAGAAGGTGCAGGGTTTGATCCAGGAGGCTTTAAGAGAGGGAGATATGC
CCAAGGCTCGAGCATTGTATTATGGCCCGTTGCAGGACGCACTTACCATG
GACCCGCTGTATTCTCTGCAAACCAAGCTGGGCAAAGCAAAAGGGGGAAA
AGAAAAGGCATTTTTAAAGTCTTTGCGCGACCTGATGCAGCGTGGAAACA
CTCGGTTTATGATGGACACGAACCAGATTGCTGTTTTGCATAAGGGAGGC
AATGGGTTGGACCTTGTTGAAGGCCAGCTCAAATATCTGGGCCCTGCAAA
GAAGACAGTGGAGACAAAATGGAAGCCTGAGAGTCTGGCCAGCATGTTGG
AGGAGGTGGCGGAGGAAATTGCGACCCGTCCTCCCCCTGTCCCGAGCACC
AGCACGGGCTTTGGGGGCCGGCAGCGTAAGAATGTGCCGGGAGGGAATGC
TGCTGCTGCTGCTGCGGCGGCGGCGGCGGCAGCGACGAATCAGGGGTCGG
CTGCATCGAGCGCGGGGTCAAGCGAGATGCCGTATGCGGCACAAGGGGAA
CCAGGAACATCGGGCGGAACGCCCGGGGATGCGACACAGAAGCAGTTCCA
GATGCCGACTTGGAGCCCCGATGGACAGTTCTTGGCGTTTACGGAGTTGT
ATTTGAATGCGAATGGAGTAGACACTTGTTGTTTGGTTGTGTATGACGTG
CGGCTCGGGCGGGAAGTGGCACGGAAGACGTTGCCCAACGCCCCGCATAT
GATCCAGTTTATGCCTGATTCGGACACGATAATTTACCTGCAGAACCAGC
ACGACAACATCTCGTTGTGTTCCATGGTGTCGGTCCGTGAGCTCCGGTCA
GGCCACGAACAAGAACGCGTGATTGACGAGGGGATGCCCCTGTTTTTCGC
CACGAGCAAGTATAATTCGGCCCGGTACTCCCTGGTGATGAATAATGGGA
AGAGGAATGGCCTGTACCGTTATTTGGGGGATATGACTTTACCTCGCAAG
GCCTGGAAGCAGCTGGCGACGCACGAGCGGAAGTTCAGGTCGCCAGAAGT
GGCCAGCACGGGTTTACAGGACAGTGTGATCTTCGTAATGGACAATTACC
TTGTCGCTGCGAGTGTGGACGGGCAGTATAGGAAGAACATCTGTCGGGTG
CAGGGGTTTTGCACCCTTGCCGTGAGTCCGAATGGGAAGCATATCGCGGT
AATGGAGGAAGACGGTGCCACCGGGTTCTATCAGATGTCCATCATCTCGG
GACGGGATGCGACGAACCCATATGGAGGCACCGAATACGTGCAGAAGACG
TTGCCGATTCAGAATGTGGTGGCCTCGTTTTATTTCTCGCCCGACAGTCA
AAAGCTTTTGTTGATGGTGACCACAAGCCCAAGCCATGAGTTTAGCGTGA
CGCGGAACACGATGAATCTGGGGGTTTCCCTGACGTGCAAGTGGGACGTG
TACATGCTTGAGACCGGGGAGGTTCGCTCTTATGGCATCTTTAACCCGCG
TCCTTACCAACTGAAAGCCTTCATCCCGTTTTTCGACCAGTATCGAAATT
CACTTTCACCCTGGTCGCCAGATTCGCAGGCGTTCTGCTACTGCCAGCGG
GAGGGGGCATTCATTCAGCGACTGCAGAAGACGGCGGTGCCCGAGGGGTT
GAAGAAGGAGATGGATAGGATCAGAAGGGGAAAGCCCGGACTTATTTTCC
TACCTGATATCGACGATCAGTCTTCCGCGTACGCCCTCGGCGCCGATTTA
GAGGTGTTAACATGGTCGTGGAATTAA
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protein sequence of NO01G04020.1

>NO01G04020.1-protein ID=NO01G04020.1-protein|Name=NO01G04020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=709bp
MTPSTSTASFSAPSRTASFLLAAAAAACCASSSLAYTMMSTATYSRTRPS
INPYNAGGSSVDSGRRPGGVEYNPFRPQPKGGVGGSLPPLQQELPELTPL
PKLACSMDKIDEYRAEVEKVQGLIQEALREGDMPKARALYYGPLQDALTM
DPLYSLQTKLGKAKGGKEKAFLKSLRDLMQRGNTRFMMDTNQIAVLHKGG
NGLDLVEGQLKYLGPAKKTVETKWKPESLASMLEEVAEEIATRPPPVPST
STGFGGRQRKNVPGGNAAAAAAAAAAAATNQGSAASSAGSSEMPYAAQGE
PGTSGGTPGDATQKQFQMPTWSPDGQFLAFTELYLNANGVDTCCLVVYDV
RLGREVARKTLPNAPHMIQFMPDSDTIIYLQNQHDNISLCSMVSVRELRS
GHEQERVIDEGMPLFFATSKYNSARYSLVMNNGKRNGLYRYLGDMTLPRK
AWKQLATHERKFRSPEVASTGLQDSVIFVMDNYLVAASVDGQYRKNICRV
QGFCTLAVSPNGKHIAVMEEDGATGFYQMSIISGRDATNPYGGTEYVQKT
LPIQNVVASFYFSPDSQKLLLMVTTSPSHEFSVTRNTMNLGVSLTCKWDV
YMLETGEVRSYGIFNPRPYQLKAFIPFFDQYRNSLSPWSPDSQAFCYCQR
EGAFIQRLQKTAVPEGLKKEMDRIRRGKPGLIFLPDIDDQSSAYALGADL
EVLTWSWN*
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mRNA from alignment at chr1:1075443..1077569-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO01G04020.1 ID=NO01G04020.1|Name=NO01G04020.1|organism=Nannochloropsis oceanica|type=mRNA|length=2127bp|location=Sequence derived from alignment at chr1:1075443..1077569- (Nannochloropsis oceanica)
ATGACGCCCTCTACCAGCACTGCATCTTTCTCCGCTCCTTCAAGAACGGC GTCTTTCCTTCTCGCCGCCGCCGCCGCCGCCTGCTGCGCCTCCTCCTCCC TGGCGTACACCATGATGTCAACGGCCACCTACTCCCGCACCCGGCCCTCT ATCAACCCGTACAACGCGGGGGGCAGCAGCGTTGACAGTGGCCGTCGCCC CGGTGGGGTTGAGTACAACCCATTCCGGCCTCAGCCCAAGGGAGGGGTTG GTGGCTCCCTGCCGCCTCTGCAGCAGGAGCTGCCTGAGCTGACGCCCCTG CCGAAGCTTGCTTGTTCGATGGACAAGATCGATGAATACAGAGCGGAGGT AGAGAAGGTGCAGGGTTTGATCCAGGAGGCTTTAAGAGAGGGAGATATGC CCAAGGCTCGAGCATTGTATTATGGCCCGTTGCAGGACGCACTTACCATG GACCCGCTGTATTCTCTGCAAACCAAGCTGGGCAAAGCAAAAGGGGGAAA AGAAAAGGCATTTTTAAAGTCTTTGCGCGACCTGATGCAGCGTGGAAACA CTCGGTTTATGATGGACACGAACCAGATTGCTGTTTTGCATAAGGGAGGC AATGGGTTGGACCTTGTTGAAGGCCAGCTCAAATATCTGGGCCCTGCAAA GAAGACAGTGGAGACAAAATGGAAGCCTGAGAGTCTGGCCAGCATGTTGG AGGAGGTGGCGGAGGAAATTGCGACCCGTCCTCCCCCTGTCCCGAGCACC AGCACGGGCTTTGGGGGCCGGCAGCGTAAGAATGTGCCGGGAGGGAATGC TGCTGCTGCTGCTGCGGCGGCGGCGGCGGCAGCGACGAATCAGGGGTCGG CTGCATCGAGCGCGGGGTCAAGCGAGATGCCGTATGCGGCACAAGGGGAA CCAGGAACATCGGGCGGAACGCCCGGGGATGCGACACAGAAGCAGTTCCA GATGCCGACTTGGAGCCCCGATGGACAGTTCTTGGCGTTTACGGAGTTGT ATTTGAATGCGAATGGAGTAGACACTTGTTGTTTGGTTGTGTATGACGTG CGGCTCGGGCGGGAAGTGGCACGGAAGACGTTGCCCAACGCCCCGCATAT GATCCAGTTTATGCCTGATTCGGACACGATAATTTACCTGCAGAACCAGC ACGACAACATCTCGTTGTGTTCCATGGTGTCGGTCCGTGAGCTCCGGTCA GGCCACGAACAAGAACGCGTGATTGACGAGGGGATGCCCCTGTTTTTCGC CACGAGCAAGTATAATTCGGCCCGGTACTCCCTGGTGATGAATAATGGGA AGAGGAATGGCCTGTACCGTTATTTGGGGGATATGACTTTACCTCGCAAG GCCTGGAAGCAGCTGGCGACGCACGAGCGGAAGTTCAGGTCGCCAGAAGT GGCCAGCACGGGTTTACAGGACAGTGTGATCTTCGTAATGGACAATTACC TTGTCGCTGCGAGTGTGGACGGGCAGTATAGGAAGAACATCTGTCGGGTG CAGGGGTTTTGCACCCTTGCCGTGAGTCCGAATGGGAAGCATATCGCGGT AATGGAGGAAGACGGTGCCACCGGGTTCTATCAGATGTCCATCATCTCGG GACGGGATGCGACGAACCCATATGGAGGCACCGAATACGTGCAGAAGACG TTGCCGATTCAGAATGTGGTGGCCTCGTTTTATTTCTCGCCCGACAGTCA AAAGCTTTTGTTGATGGTGACCACAAGCCCAAGCCATGAGTTTAGCGTGA CGCGGAACACGATGAATCTGGGGGTTTCCCTGACGTGCAAGTGGGACGTG TACATGCTTGAGACCGGGGAGGTTCGCTCTTATGGCATCTTTAACCCGCG TCCTTACCAACTGAAAGCCTTCATCCCGTTTTTCGACCAGTATCGAAATT CACTTTCACCCTGGTCGCCAGATTCGCAGGCGTTCTGCTACTGCCAGCGG GAGGGGGCATTCATTCAGCGACTGCAGAAGACGGCGGTGCCCGAGGGGTT GAAGAAGGAGATGGATAGGATCAGAAGGGGAAAGCCCGGACTTATTTTCC TACCTGATATCGACGATCAGTCTTCCGCGTACGCCCTCGGCGCCGATTTA GAGGTGTTAACATGGTCGTGGAATTAA
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Coding sequence (CDS) from alignment at chr1:1075443..1077569-

>NO01G04020.1 ID=NO01G04020.1|Name=NO01G04020.1|organism=Nannochloropsis oceanica|type=CDS|length=2127bp|location=Sequence derived from alignment at chr1:1075443..1077569- (Nannochloropsis oceanica)
ATGACGCCCTCTACCAGCACTGCATCTTTCTCCGCTCCTTCAAGAACGGC
GTCTTTCCTTCTCGCCGCCGCCGCCGCCGCCTGCTGCGCCTCCTCCTCCC
TGGCGTACACCATGATGTCAACGGCCACCTACTCCCGCACCCGGCCCTCT
ATCAACCCGTACAACGCGGGGGGCAGCAGCGTTGACAGTGGCCGTCGCCC
CGGTGGGGTTGAGTACAACCCATTCCGGCCTCAGCCCAAGGGAGGGGTTG
GTGGCTCCCTGCCGCCTCTGCAGCAGGAGCTGCCTGAGCTGACGCCCCTG
CCGAAGCTTGCTTGTTCGATGGACAAGATCGATGAATACAGAGCGGAGGT
AGAGAAGGTGCAGGGTTTGATCCAGGAGGCTTTAAGAGAGGGAGATATGC
CCAAGGCTCGAGCATTGTATTATGGCCCGTTGCAGGACGCACTTACCATG
GACCCGCTGTATTCTCTGCAAACCAAGCTGGGCAAAGCAAAAGGGGGAAA
AGAAAAGGCATTTTTAAAGTCTTTGCGCGACCTGATGCAGCGTGGAAACA
CTCGGTTTATGATGGACACGAACCAGATTGCTGTTTTGCATAAGGGAGGC
AATGGGTTGGACCTTGTTGAAGGCCAGCTCAAATATCTGGGCCCTGCAAA
GAAGACAGTGGAGACAAAATGGAAGCCTGAGAGTCTGGCCAGCATGTTGG
AGGAGGTGGCGGAGGAAATTGCGACCCGTCCTCCCCCTGTCCCGAGCACC
AGCACGGGCTTTGGGGGCCGGCAGCGTAAGAATGTGCCGGGAGGGAATGC
TGCTGCTGCTGCTGCGGCGGCGGCGGCGGCAGCGACGAATCAGGGGTCGG
CTGCATCGAGCGCGGGGTCAAGCGAGATGCCGTATGCGGCACAAGGGGAA
CCAGGAACATCGGGCGGAACGCCCGGGGATGCGACACAGAAGCAGTTCCA
GATGCCGACTTGGAGCCCCGATGGACAGTTCTTGGCGTTTACGGAGTTGT
ATTTGAATGCGAATGGAGTAGACACTTGTTGTTTGGTTGTGTATGACGTG
CGGCTCGGGCGGGAAGTGGCACGGAAGACGTTGCCCAACGCCCCGCATAT
GATCCAGTTTATGCCTGATTCGGACACGATAATTTACCTGCAGAACCAGC
ACGACAACATCTCGTTGTGTTCCATGGTGTCGGTCCGTGAGCTCCGGTCA
GGCCACGAACAAGAACGCGTGATTGACGAGGGGATGCCCCTGTTTTTCGC
CACGAGCAAGTATAATTCGGCCCGGTACTCCCTGGTGATGAATAATGGGA
AGAGGAATGGCCTGTACCGTTATTTGGGGGATATGACTTTACCTCGCAAG
GCCTGGAAGCAGCTGGCGACGCACGAGCGGAAGTTCAGGTCGCCAGAAGT
GGCCAGCACGGGTTTACAGGACAGTGTGATCTTCGTAATGGACAATTACC
TTGTCGCTGCGAGTGTGGACGGGCAGTATAGGAAGAACATCTGTCGGGTG
CAGGGGTTTTGCACCCTTGCCGTGAGTCCGAATGGGAAGCATATCGCGGT
AATGGAGGAAGACGGTGCCACCGGGTTCTATCAGATGTCCATCATCTCGG
GACGGGATGCGACGAACCCATATGGAGGCACCGAATACGTGCAGAAGACG
TTGCCGATTCAGAATGTGGTGGCCTCGTTTTATTTCTCGCCCGACAGTCA
AAAGCTTTTGTTGATGGTGACCACAAGCCCAAGCCATGAGTTTAGCGTGA
CGCGGAACACGATGAATCTGGGGGTTTCCCTGACGTGCAAGTGGGACGTG
TACATGCTTGAGACCGGGGAGGTTCGCTCTTATGGCATCTTTAACCCGCG
TCCTTACCAACTGAAAGCCTTCATCCCGTTTTTCGACCAGTATCGAAATT
CACTTTCACCCTGGTCGCCAGATTCGCAGGCGTTCTGCTACTGCCAGCGG
GAGGGGGCATTCATTCAGCGACTGCAGAAGACGGCGGTGCCCGAGGGGTT
GAAGAAGGAGATGGATAGGATCAGAAGGGGAAAGCCCGGACTTATTTTCC
TACCTGATATCGACGATCAGTCTTCCGCGTACGCCCTCGGCGCCGATTTA
GAGGTGTTAACATGGTCGTGGAATTAA
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Synonyms
Publications