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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr1 | genome | chr1:1075443..1077569 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO01G04020.1 vs.
Match: EWM29335.1 (acylaminoacyl peptidase [Nannochloropsis gaditana]) HSP 1 Score: 1176.4 bits (3042), Expect = 0.000e+0 Identity = 604/714 (84.59%), Postives = 641/714 (89.78%), Query Frame = 0
Query: 1 MTPSTSTASFSAPSRTASFLLAAAAAACCA-----SSSLAYTMMSTATYSRTRPSINPYNAGGSSVDSGRRPGGVEYNPFRPQPKGGVGGSLPPLQQELPELTPLPKLACSMDKIDEYRAEVEKVQGLIQEALREGDMPKARALYYGPLQDALTMDPLYSLQTKLGKAKGGKEKAFLKSLRDLMQRGNTRFMMDTNQIAVLHKGGNGLDLVEGQLKYLGPAKKTVETKWKPESLASMLEEVAEEIATRPPPVPSTSTGFGGRQRKNVPGGNAAAAAAAAAAAATNQGSAASSAGSS-EMPYAAQGEPGTSGGTPGDATQKQFQMPTWSPDGQFLAFTELYLNANGVDTCCLVVYDVRLGREVARKTLPNAPHMIQFMPDSDTIIYLQNQHDNISLCSMVSVRELRSGHEQERVIDEGMPLFFATSKYNSARYSLVMNNGKRNGLYRYLGDMTLPRKAWKQLATHERKFRSPEVASTGLQDSVIFVMDNYLVAASVDGQYRKNICRVQGFCTLAVSPNGKHIAVMEEDGATGFYQMSIISGRDATNPYGGTEYVQKTLPIQNVVASFYFSPDSQKLLLMVTTSPSHEFSVTRNTMNLGVSLTCKWDVYMLETGEVRSYGIFNPRPYQLKAFIPFFDQYRNSLSPWSPDSQAFCYCQREGAFIQRLQKTAVPEGLKKEMDRIRRGKPGLIFLPDIDDQSSAYALGADLEVLTWSWN 709
M ++ AS S +R AA C S + MSTATYSR+RPSINPY GG V+SGR+PGGVEYNPFRP P+GG GSLPP+QQ L ELTPLPKLACSMDKIDEYR EVE+VQ IQEALREGDMPKARALYYGPLQDAL +DPLYSLQ +LGKAKG KEKAF K LRDLMQRGNTRF+M TNQIAVLHKGGNGLDLVEGQLKYLGP+KK+VETKWKPESLA+MLEEVAEEIATRPPP PSTSTGFGGRQRKNVPGGN AAAAAAAAA++ QG+ + +AG+S EMPYA Q + TSG + TQKQFQMPTWSPDG++LAFTELYLNANGVDTCCLVVY+V+ G+EVARKTLPNAPHMIQFMPDSD IIYLQNQHDNIS+CSMVSVREL SG E ERVIDEGMPLFFATSKYNS RYSLVMNNGKRNGLYRYLGDMTLPRKAWKQLATHERKFRSPEVASTGLQDSVIFVMDNYLVAASVDG+YRKNICRVQGFCTLAVSPNGKHIA+MEEDGATGFY+MSIISGRDATNPYGGT YVQKTLPI NVVASFYFSPDSQKLLLMVTTSPSHEFSVTRNTMNLGVSLTCKWDVYML +GEVRSYG+FNPRPYQLKAFIPFFDQYRNSLSPWSPDSQAFCYCQREGAFIQRLQKTAVPEGLKKEMDRIRRGKPGLIFLPDIDD+SSAYALGADLEVLTWSW+
Sbjct: 1 MKTASDRASISRRARLLFTTTAACGLTLCPLVGAYHPSSSTIRMSTATYSRSRPSINPYGVGGGGVESGRKPGGVEYNPFRPTPEGGQRGSLPPMQQGLEELTPLPKLACSMDKIDEYRVEVERVQSRIQEALREGDMPKARALYYGPLQDALNLDPLYSLQKRLGKAKGKKEKAFFKVLRDLMQRGNTRFLMSTNQIAVLHKGGNGLDLVEGQLKYLGPSKKSVETKWKPESLATMLEEVAEEIATRPPPPPSTSTGFGGRQRKNVPGGN-AAAAAAAAASSLQQGTGSGTAGASGEMPYATQ-DASTSGAE--EKTQKQFQMPTWSPDGRYLAFTELYLNANGVDTCCLVVYNVKEGKEVARKTLPNAPHMIQFMPDSDAIIYLQNQHDNISVCSMVSVRELMSGQEVERVIDEGMPLFFATSKYNSDRYSLVMNNGKRNGLYRYLGDMTLPRKAWKQLATHERKFRSPEVASTGLQDSVIFVMDNYLVAASVDGRYRKNICRVQGFCTLAVSPNGKHIALMEEDGATGFYKMSIISGRDATNPYGGTAYVQKTLPINNVVASFYFSPDSQKLLLMVTTSPSHEFSVTRNTMNLGVSLTCKWDVYMLGSGEVRSYGMFNPRPYQLKAFIPFFDQYRNSLSPWSPDSQAFCYCQREGAFIQRLQKTAVPEGLKKEMDRIRRGKPGLIFLPDIDDESSAYALGADLEVLTWSWS 710
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO01G04020.1 ID=NO01G04020.1|Name=NO01G04020.1|organism=Nannochloropsis oceanica|type=mRNA|length=2127bp ATGACGCCCTCTACCAGCACTGCATCTTTCTCCGCTCCTTCAAGAACGGC GTCTTTCCTTCTCGCCGCCGCCGCCGCCGCCTGCTGCGCCTCCTCCTCCC TGGCGTACACCATGATGTCAACGGCCACCTACTCCCGCACCCGGCCCTCT ATCAACCCGTACAACGCGGGGGGCAGCAGCGTTGACAGTGGCCGTCGCCC CGGTGGGGTTGAGTACAACCCATTCCGGCCTCAGCCCAAGGGAGGGGTTG GTGGCTCCCTGCCGCCTCTGCAGCAGGAGCTGCCTGAGCTGACGCCCCTG CCGAAGCTTGCTTGTTCGATGGACAAGATCGATGAATACAGAGCGGAGGT AGAGAAGGTGCAGGGTTTGATCCAGGAGGCTTTAAGAGAGGGAGATATGC CCAAGGCTCGAGCATTGTATTATGGCCCGTTGCAGGACGCACTTACCATG GACCCGCTGTATTCTCTGCAAACCAAGCTGGGCAAAGCAAAAGGGGGAAA AGAAAAGGCATTTTTAAAGTCTTTGCGCGACCTGATGCAGCGTGGAAACA CTCGGTTTATGATGGACACGAACCAGATTGCTGTTTTGCATAAGGGAGGC AATGGGTTGGACCTTGTTGAAGGCCAGCTCAAATATCTGGGCCCTGCAAA GAAGACAGTGGAGACAAAATGGAAGCCTGAGAGTCTGGCCAGCATGTTGG AGGAGGTGGCGGAGGAAATTGCGACCCGTCCTCCCCCTGTCCCGAGCACC AGCACGGGCTTTGGGGGCCGGCAGCGTAAGAATGTGCCGGGAGGGAATGC TGCTGCTGCTGCTGCGGCGGCGGCGGCGGCAGCGACGAATCAGGGGTCGG CTGCATCGAGCGCGGGGTCAAGCGAGATGCCGTATGCGGCACAAGGGGAA CCAGGAACATCGGGCGGAACGCCCGGGGATGCGACACAGAAGCAGTTCCA GATGCCGACTTGGAGCCCCGATGGACAGTTCTTGGCGTTTACGGAGTTGT ATTTGAATGCGAATGGAGTAGACACTTGTTGTTTGGTTGTGTATGACGTG CGGCTCGGGCGGGAAGTGGCACGGAAGACGTTGCCCAACGCCCCGCATAT GATCCAGTTTATGCCTGATTCGGACACGATAATTTACCTGCAGAACCAGC ACGACAACATCTCGTTGTGTTCCATGGTGTCGGTCCGTGAGCTCCGGTCA GGCCACGAACAAGAACGCGTGATTGACGAGGGGATGCCCCTGTTTTTCGC CACGAGCAAGTATAATTCGGCCCGGTACTCCCTGGTGATGAATAATGGGA AGAGGAATGGCCTGTACCGTTATTTGGGGGATATGACTTTACCTCGCAAG GCCTGGAAGCAGCTGGCGACGCACGAGCGGAAGTTCAGGTCGCCAGAAGT GGCCAGCACGGGTTTACAGGACAGTGTGATCTTCGTAATGGACAATTACC TTGTCGCTGCGAGTGTGGACGGGCAGTATAGGAAGAACATCTGTCGGGTG CAGGGGTTTTGCACCCTTGCCGTGAGTCCGAATGGGAAGCATATCGCGGT AATGGAGGAAGACGGTGCCACCGGGTTCTATCAGATGTCCATCATCTCGG GACGGGATGCGACGAACCCATATGGAGGCACCGAATACGTGCAGAAGACG TTGCCGATTCAGAATGTGGTGGCCTCGTTTTATTTCTCGCCCGACAGTCA AAAGCTTTTGTTGATGGTGACCACAAGCCCAAGCCATGAGTTTAGCGTGA CGCGGAACACGATGAATCTGGGGGTTTCCCTGACGTGCAAGTGGGACGTG TACATGCTTGAGACCGGGGAGGTTCGCTCTTATGGCATCTTTAACCCGCG TCCTTACCAACTGAAAGCCTTCATCCCGTTTTTCGACCAGTATCGAAATT CACTTTCACCCTGGTCGCCAGATTCGCAGGCGTTCTGCTACTGCCAGCGG GAGGGGGCATTCATTCAGCGACTGCAGAAGACGGCGGTGCCCGAGGGGTT GAAGAAGGAGATGGATAGGATCAGAAGGGGAAAGCCCGGACTTATTTTCC TACCTGATATCGACGATCAGTCTTCCGCGTACGCCCTCGGCGCCGATTTA GAGGTGTTAACATGGTCGTGGAATTAA back to topprotein sequence of NO01G04020.1 >NO01G04020.1-protein ID=NO01G04020.1-protein|Name=NO01G04020.1|organism=Nannochloropsis oceanica|type=polypeptide|length=709bp MTPSTSTASFSAPSRTASFLLAAAAAACCASSSLAYTMMSTATYSRTRPS INPYNAGGSSVDSGRRPGGVEYNPFRPQPKGGVGGSLPPLQQELPELTPL PKLACSMDKIDEYRAEVEKVQGLIQEALREGDMPKARALYYGPLQDALTM DPLYSLQTKLGKAKGGKEKAFLKSLRDLMQRGNTRFMMDTNQIAVLHKGG NGLDLVEGQLKYLGPAKKTVETKWKPESLASMLEEVAEEIATRPPPVPST STGFGGRQRKNVPGGNAAAAAAAAAAAATNQGSAASSAGSSEMPYAAQGE PGTSGGTPGDATQKQFQMPTWSPDGQFLAFTELYLNANGVDTCCLVVYDV RLGREVARKTLPNAPHMIQFMPDSDTIIYLQNQHDNISLCSMVSVRELRS GHEQERVIDEGMPLFFATSKYNSARYSLVMNNGKRNGLYRYLGDMTLPRK AWKQLATHERKFRSPEVASTGLQDSVIFVMDNYLVAASVDGQYRKNICRV QGFCTLAVSPNGKHIAVMEEDGATGFYQMSIISGRDATNPYGGTEYVQKT LPIQNVVASFYFSPDSQKLLLMVTTSPSHEFSVTRNTMNLGVSLTCKWDV YMLETGEVRSYGIFNPRPYQLKAFIPFFDQYRNSLSPWSPDSQAFCYCQR EGAFIQRLQKTAVPEGLKKEMDRIRRGKPGLIFLPDIDDQSSAYALGADL EVLTWSWN* back to topmRNA from alignment at chr1:1075443..1077569- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO01G04020.1 ID=NO01G04020.1|Name=NO01G04020.1|organism=Nannochloropsis oceanica|type=mRNA|length=2127bp|location=Sequence derived from alignment at chr1:1075443..1077569- (Nannochloropsis oceanica) ATGACGCCCTCTACCAGCACTGCATCTTTCTCCGCTCCTTCAAGAACGGC
GTCTTTCCTTCTCGCCGCCGCCGCCGCCGCCTGCTGCGCCTCCTCCTCCC
TGGCGTACACCATGATGTCAACGGCCACCTACTCCCGCACCCGGCCCTCT
ATCAACCCGTACAACGCGGGGGGCAGCAGCGTTGACAGTGGCCGTCGCCC
CGGTGGGGTTGAGTACAACCCATTCCGGCCTCAGCCCAAGGGAGGGGTTG
GTGGCTCCCTGCCGCCTCTGCAGCAGGAGCTGCCTGAGCTGACGCCCCTG
CCGAAGCTTGCTTGTTCGATGGACAAGATCGATGAATACAGAGCGGAGGT
AGAGAAGGTGCAGGGTTTGATCCAGGAGGCTTTAAGAGAGGGAGATATGC
CCAAGGCTCGAGCATTGTATTATGGCCCGTTGCAGGACGCACTTACCATG
GACCCGCTGTATTCTCTGCAAACCAAGCTGGGCAAAGCAAAAGGGGGAAA
AGAAAAGGCATTTTTAAAGTCTTTGCGCGACCTGATGCAGCGTGGAAACA
CTCGGTTTATGATGGACACGAACCAGATTGCTGTTTTGCATAAGGGAGGC
AATGGGTTGGACCTTGTTGAAGGCCAGCTCAAATATCTGGGCCCTGCAAA
GAAGACAGTGGAGACAAAATGGAAGCCTGAGAGTCTGGCCAGCATGTTGG
AGGAGGTGGCGGAGGAAATTGCGACCCGTCCTCCCCCTGTCCCGAGCACC
AGCACGGGCTTTGGGGGCCGGCAGCGTAAGAATGTGCCGGGAGGGAATGC
TGCTGCTGCTGCTGCGGCGGCGGCGGCGGCAGCGACGAATCAGGGGTCGG
CTGCATCGAGCGCGGGGTCAAGCGAGATGCCGTATGCGGCACAAGGGGAA
CCAGGAACATCGGGCGGAACGCCCGGGGATGCGACACAGAAGCAGTTCCA
GATGCCGACTTGGAGCCCCGATGGACAGTTCTTGGCGTTTACGGAGTTGT
ATTTGAATGCGAATGGAGTAGACACTTGTTGTTTGGTTGTGTATGACGTG
CGGCTCGGGCGGGAAGTGGCACGGAAGACGTTGCCCAACGCCCCGCATAT
GATCCAGTTTATGCCTGATTCGGACACGATAATTTACCTGCAGAACCAGC
ACGACAACATCTCGTTGTGTTCCATGGTGTCGGTCCGTGAGCTCCGGTCA
GGCCACGAACAAGAACGCGTGATTGACGAGGGGATGCCCCTGTTTTTCGC
CACGAGCAAGTATAATTCGGCCCGGTACTCCCTGGTGATGAATAATGGGA
AGAGGAATGGCCTGTACCGTTATTTGGGGGATATGACTTTACCTCGCAAG
GCCTGGAAGCAGCTGGCGACGCACGAGCGGAAGTTCAGGTCGCCAGAAGT
GGCCAGCACGGGTTTACAGGACAGTGTGATCTTCGTAATGGACAATTACC
TTGTCGCTGCGAGTGTGGACGGGCAGTATAGGAAGAACATCTGTCGGGTG
CAGGGGTTTTGCACCCTTGCCGTGAGTCCGAATGGGAAGCATATCGCGGT
AATGGAGGAAGACGGTGCCACCGGGTTCTATCAGATGTCCATCATCTCGG
GACGGGATGCGACGAACCCATATGGAGGCACCGAATACGTGCAGAAGACG
TTGCCGATTCAGAATGTGGTGGCCTCGTTTTATTTCTCGCCCGACAGTCA
AAAGCTTTTGTTGATGGTGACCACAAGCCCAAGCCATGAGTTTAGCGTGA
CGCGGAACACGATGAATCTGGGGGTTTCCCTGACGTGCAAGTGGGACGTG
TACATGCTTGAGACCGGGGAGGTTCGCTCTTATGGCATCTTTAACCCGCG
TCCTTACCAACTGAAAGCCTTCATCCCGTTTTTCGACCAGTATCGAAATT
CACTTTCACCCTGGTCGCCAGATTCGCAGGCGTTCTGCTACTGCCAGCGG
GAGGGGGCATTCATTCAGCGACTGCAGAAGACGGCGGTGCCCGAGGGGTT
GAAGAAGGAGATGGATAGGATCAGAAGGGGAAAGCCCGGACTTATTTTCC
TACCTGATATCGACGATCAGTCTTCCGCGTACGCCCTCGGCGCCGATTTA
GAGGTGTTAACATGGTCGTGGAATTAA back to topCoding sequence (CDS) from alignment at chr1:1075443..1077569- >NO01G04020.1 ID=NO01G04020.1|Name=NO01G04020.1|organism=Nannochloropsis oceanica|type=CDS|length=2127bp|location=Sequence derived from alignment at chr1:1075443..1077569- (Nannochloropsis oceanica) ATGACGCCCTCTACCAGCACTGCATCTTTCTCCGCTCCTTCAAGAACGGC GTCTTTCCTTCTCGCCGCCGCCGCCGCCGCCTGCTGCGCCTCCTCCTCCC TGGCGTACACCATGATGTCAACGGCCACCTACTCCCGCACCCGGCCCTCT ATCAACCCGTACAACGCGGGGGGCAGCAGCGTTGACAGTGGCCGTCGCCC CGGTGGGGTTGAGTACAACCCATTCCGGCCTCAGCCCAAGGGAGGGGTTG GTGGCTCCCTGCCGCCTCTGCAGCAGGAGCTGCCTGAGCTGACGCCCCTG CCGAAGCTTGCTTGTTCGATGGACAAGATCGATGAATACAGAGCGGAGGT AGAGAAGGTGCAGGGTTTGATCCAGGAGGCTTTAAGAGAGGGAGATATGC CCAAGGCTCGAGCATTGTATTATGGCCCGTTGCAGGACGCACTTACCATG GACCCGCTGTATTCTCTGCAAACCAAGCTGGGCAAAGCAAAAGGGGGAAA AGAAAAGGCATTTTTAAAGTCTTTGCGCGACCTGATGCAGCGTGGAAACA CTCGGTTTATGATGGACACGAACCAGATTGCTGTTTTGCATAAGGGAGGC AATGGGTTGGACCTTGTTGAAGGCCAGCTCAAATATCTGGGCCCTGCAAA GAAGACAGTGGAGACAAAATGGAAGCCTGAGAGTCTGGCCAGCATGTTGG AGGAGGTGGCGGAGGAAATTGCGACCCGTCCTCCCCCTGTCCCGAGCACC AGCACGGGCTTTGGGGGCCGGCAGCGTAAGAATGTGCCGGGAGGGAATGC TGCTGCTGCTGCTGCGGCGGCGGCGGCGGCAGCGACGAATCAGGGGTCGG CTGCATCGAGCGCGGGGTCAAGCGAGATGCCGTATGCGGCACAAGGGGAA CCAGGAACATCGGGCGGAACGCCCGGGGATGCGACACAGAAGCAGTTCCA GATGCCGACTTGGAGCCCCGATGGACAGTTCTTGGCGTTTACGGAGTTGT ATTTGAATGCGAATGGAGTAGACACTTGTTGTTTGGTTGTGTATGACGTG CGGCTCGGGCGGGAAGTGGCACGGAAGACGTTGCCCAACGCCCCGCATAT GATCCAGTTTATGCCTGATTCGGACACGATAATTTACCTGCAGAACCAGC ACGACAACATCTCGTTGTGTTCCATGGTGTCGGTCCGTGAGCTCCGGTCA GGCCACGAACAAGAACGCGTGATTGACGAGGGGATGCCCCTGTTTTTCGC CACGAGCAAGTATAATTCGGCCCGGTACTCCCTGGTGATGAATAATGGGA AGAGGAATGGCCTGTACCGTTATTTGGGGGATATGACTTTACCTCGCAAG GCCTGGAAGCAGCTGGCGACGCACGAGCGGAAGTTCAGGTCGCCAGAAGT GGCCAGCACGGGTTTACAGGACAGTGTGATCTTCGTAATGGACAATTACC TTGTCGCTGCGAGTGTGGACGGGCAGTATAGGAAGAACATCTGTCGGGTG CAGGGGTTTTGCACCCTTGCCGTGAGTCCGAATGGGAAGCATATCGCGGT AATGGAGGAAGACGGTGCCACCGGGTTCTATCAGATGTCCATCATCTCGG GACGGGATGCGACGAACCCATATGGAGGCACCGAATACGTGCAGAAGACG TTGCCGATTCAGAATGTGGTGGCCTCGTTTTATTTCTCGCCCGACAGTCA AAAGCTTTTGTTGATGGTGACCACAAGCCCAAGCCATGAGTTTAGCGTGA CGCGGAACACGATGAATCTGGGGGTTTCCCTGACGTGCAAGTGGGACGTG TACATGCTTGAGACCGGGGAGGTTCGCTCTTATGGCATCTTTAACCCGCG TCCTTACCAACTGAAAGCCTTCATCCCGTTTTTCGACCAGTATCGAAATT CACTTTCACCCTGGTCGCCAGATTCGCAGGCGTTCTGCTACTGCCAGCGG GAGGGGGCATTCATTCAGCGACTGCAGAAGACGGCGGTGCCCGAGGGGTT GAAGAAGGAGATGGATAGGATCAGAAGGGGAAAGCCCGGACTTATTTTCC TACCTGATATCGACGATCAGTCTTCCGCGTACGCCCTCGGCGCCGATTTA GAGGTGTTAACATGGTCGTGGAATTAA back to top
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