NO01G03970.1, NO01G03970.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO01G03970.1
Unique NameNO01G03970.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length5216
Alignment locationchr1:1057411..1062836 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:1057411..1062836 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO01G03970.1 vs.
Match: EWM29321.1 (alpha-l-rhamnosidase [Nannochloropsis gaditana])

HSP 1 Score: 1276.2 bits (3301), Expect = 0.000e+0
Identity = 671/1114 (60.23%), Postives = 801/1114 (71.90%), Query Frame = 0
Query:    9 SAMVATIACFSLADSLEYTITSQRVEYMPCPAMGIDVANPRFAWVVEPSDIS-----------------------VRGAYQEAFRIIITAADAGREVIWDSGRVNNSESRHIRFGSVGELPTAALASATAYDWTVTAWVATDVLPVSPSISSSTTT---------RKKAETTGAVQSQPSPAARFVTGMLNASKDWAGADWLVAANSSTQNLCRAPFIVPNSEKVERALLVMAGLGYFQASLNGARVSDAELESGWTDYGRRVPYSVYDVTGLIKGGERGGGGNVLGISLGNGWYSTNGGAEPTDVPRTFIAKLFVNGKEVL-STSSKQQE---------------------MWLCAVGPIVYDSVYNGEVFDGRLAARLVGWDDPAFFKTGISGAAGSDGFAATWVPAVVSSNPPTGELISPKMPPIRRMEELVAISLTEPQQGVFVVDFGQNIAGRVALSLPRRGKGSVTLRHAEVLQHAGIAAVPEPGMISVDNLRGARATDVYIFDEDERENGRKEAARRREGEVEEEERVVFEPTFTYHGFRYVEIRGYEPRLSDVKAIVLHTDVVPIGDITFSDALLNQIQKAIHWGQRANIMSVPTDCPQRDERKGWLGDAQLSGEEALFNFDMVATYLKFVRDITDTQDAAGQIGDTAPFSIGGRPADPSWGSAFPSLVYFLYEETGDVGILEEFYPALAKYVDSVLLAAEVAGVVNLYKSYGDWCPVPGQPMCSPHLTGSFSFLENLQQLSDMAFAMGKEEDGKVYGAYHRSFTRAFHAAFYHGGTYDNGVQTCLALPLWAGAVPADLQKGVEEKLVSDLVDTQKYHSTTGIIGMKYMLEVLSRLGKTDVAVQMLQQRDYPSFGYMLTNPLEPATTIWELWNSDQAGPAMNSRNHVMFGGPVGGWFYKYLGGVRKGPATREGAGYRLVIFAPPLAACMPLEKVTTTVRTLQGVVAMEWEQGAGTLPTTAATAAAAVATSSLSLASRNLSNSSSRHLQASIQVPLGSKSRVILDGRALGDVNPMLSVTVDGVDLKQAMKMSGQGLEVLQASDDFVELLLASGGWAIGVRFDVREDEALKCIAPSEVKMVSTAMGVGVGERGMADFAVVTEGVIASA 1069
            +A++  ++  +LA   E TIT+ RVEYMPCPAMGIDVA+PRF W+VE +  S                       VRG YQ+AF+II+TAADA   V+WDSGRV + ESRH+ FGSVG  P AAL+SATAYDWTV+ WVATDV   + ++               +     TG+ +SQ  PAARFVTGMLN + D +GA WLVA  SS QNLCRAP  V     VERA+L++AGLGY  ASLNG RVSDAELESGWTDY RRVPYSVYDVTGL++G    G  NVLG++LGNGWY+T GG EP+ V +TFIAKLFVNGKEVL ST++ + E                     +W+C  GP+VYDS+YNGEVFD R A+R+ GWD P F               + W  A+++  PP G+L++PKMPP+RR+ EL A+SL+EP  GVFVVDFGQNIAGRVA+SLPR G G+VTLRHAEVLQH GI A P PGMIS DNLR ARATDVY++ E +  +GR   + R EG+V     VV+EPTFTYHGFRY+E+RGYEPRLSDVKA+VL +D  P G+I FSD+LLNQ+Q AI WGQR N+MSVPTDCPQRDERKGWLGDAQLSGEE LFNFD+VAT +KFVRDI DTQ+  GQI DTAPF+ GGRPADPSWGSA PSLV++L+  TGD  +L+EFYP L KY+DS+L+AAE+AG+ NLYKSYGDWC +PG PMCSPHLTGSFSFLEN++Q+++MA A+GK +D K+Y AYH+SFTRAFH AFY  GTYDNGVQTCLALPLWAGAVP DLQ+ + +KLV DLV+T +YH+TTGIIGMKYMLEVLSR+GKTDVA +MLQQRDYPSFGYMLTNP EPATTIWELWN DQAGP MNSRNHVMFGG VGGW YK+LGGVR GPA+   AGYR V FAPPL  CMPL KV+T+++TLQG V M+WE G           A+   +S     S N S SS R L  SI +PLGS+  VILDGR L   +P  +V +DGVD+ +A  +   GLEVLQA+D  VEL L SG W I   F+V  + A  C   ++     +  G G G  G    A   EGV A++
Sbjct:   47 AALICLLSRHALA--YECTITNPRVEYMPCPAMGIDVASPRFGWIVECASTSSIHTAASGSSSPNSKGPNGAGTPVRGTYQQAFQIIVTAADADGAVVWDSGRVESMESRHVVFGSVGRSPQAALSSATAYDWTVSVWVATDVPRKNVALEGRARNVAGKKILKVQDTGRRTGSARSQAMPAARFVTGMLNVTHDLSGAHWLVA-KSSGQNLCRAPVQV-GDVAVERAVLLVAGLGYHVASLNGRRVSDAELESGWTDYERRVPYSVYDVTGLVRGQ---GAWNVLGVALGNGWYATWGGGEPSRVRKTFIAKLFVNGKEVLASTAATRAEKKGRGEGDGTAVSSERGADDALWVCGEGPVVYDSLYNGEVFDARRASRVQGWDTPEF------------KIDSHWDFAMIAPAPPPGKLVAPKMPPVRRVAELPALSLSEPAPGVFVVDFGQNIAGRVAISLPRTGTGNVTLRHAEVLQHTGITAHPVPGMISTDNLRSARATDVYMYGEGQGPDGR---SGRGEGDV-----VVYEPTFTYHGFRYLEVRGYEPRLSDVKAVVLQSDAAPTGNIEFSDSLLNQLQAAIFWGQRGNLMSVPTDCPQRDERKGWLGDAQLSGEEVLFNFDVVATLIKFVRDICDTQNEVGQIADTAPFTFGGRPADPSWGSALPSLVFYLFTATGDTLVLQEFYPYLVKYLDSLLVAAEIAGLANLYKSYGDWCALPGVPMCSPHLTGSFSFLENVRQMAEMAAALGKTQDEKIYLAYHQSFTRAFHGAFYRNGTYDNGVQTCLALPLWAGAVPPDLQESIADKLVRDLVETHRYHATTGIIGMKYMLEVLSRMGKTDVAARMLQQRDYPSFGYMLTNPHEPATTIWELWNGDQAGPEMNSRNHVMFGGSVGGWLYKFLGGVRAGPASLAAAGYREVEFAPPLGTCMPLTKVSTSLQTLQGRVRMDWELG-------PCEEASPPWSSKELRPSTNSSKSSCRRLLTSILIPLGSRGHVILDGRTLAPTSPAFTVHIDGVDVLEA-SLEPWGLEVLQATDSLVELSLTSGTWMIETLFEVNAEAASLC--DTDTAFSLSPRGGGGGYSGGMQDATGAEGVTATS 1123          
The following BLAST results are available for this feature:
BLAST of NO01G03970.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM29321.10.000e+060.23alpha-l-rhamnosidase [Nannochloropsis gaditana][more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G03970NO01G03970Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO01G03970.1NO01G03970.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO01G03970.1.cds1NO01G03970.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G03970.1.cds2NO01G03970.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO01G03970.1 ID=NO01G03970.1|Name=NO01G03970.1|organism=Nannochloropsis oceanica|type=mRNA|length=5216bp
TGTTGCTTCTCCGTGCAGTATCAAGTGCCTTTTTGGTTACCTGAGCATGC
CACACAAAGCAGCACATGAGCAAGGCGATAGATGCAGATGTACATGTGGT
CTTTCTCACGCTTCCTAAAATATCCTTTCTGTGACAGGACGCAATCTGCC
CTGTTGTGGCGCCTTGCAGCATACGGCTTGCTGGTACCTCCCGCAGGGTG
ACACATCGATTTTCCCTGCCACCACCACATCTCTCCCCGGAGCAATTAGA
ACACACACCAAGAGGTTTATTGAGATTGCTGCAGACTATGTGCTTTCATT
GATTGTTCGACACACATACAAAACCATTACACTCATCCAGCCACAGCAAA
TATCAACCGCCACGCCCTCACACGACCCCGTTCCTCGCACACCATTATGC
GCACAGATCCATGCAGCTTCTAGCTGTTCCCCTCTCGGCGATGGTGGCAA
CTATTGCTTGCTTCTCTCTGGCTGATTCTCTGGAGTACACCATTACCAGC
CAGCGAGTCGAGTATATGCCCTGTCCCGCCATGGGGATCGACGTGGCCAA
CCCACGGTTTGCGTGGGTGGTGGAGCCTTCTGATATATCCGTCCGTGGTG
CCTACCAAGAGGCTTTTCGCATCATTATCACGGCTGCGGATGCTGGCAGA
GAAGTGATTTGGGATTCGGGGCGTGTCAACAATTCGGAGAGCCGGCACAT
AAGATTTGGCTCGGTGGGAGAGCTTCCCACAGCCGCTTTGGCTAGTGCGA
CTGCTTATGATTGGACGGTGACTGCGTGGGTGGCGACGGATGTGTTGCCT
GTGTCTCCCTCCATCTCCTCTTCCACCACGACGAGGAAGAAGGCGGAGAC
GACGGGAGCAGTGCAAAGCCAACCTTCGCCGGCAGCTCGTTTTGTGACGG
GCATGCTAAATGCTTCCAAGGACTGGGCGGGGGCCGACTGGCTAGTGGCT
GCCAATAGCTCCACACAAAATCTGTGTCGTGCACCATTTATCGTCCCTAA
TAGCGAGAAGGTCGAGCGGGCGTTGTTGGTGATGGCGGGGTTGGGGTATT
TCCAAGCGTCTTTGAATGGAGCGAGGGTCTCGGATGCTGAATTAGAAAGC
GGATGGACGGATTACGGACGACGGGTGCCTTATTCGGTCTATGATGTCAC
AGGCTTGATAAAAGGAGGGGAAAGGGGTGGGGGTGGGAATGTGTTGGGTA
TCTCTTTGGGCAATGGCTGGTATAGCACGAATGGAGGGGCGGAACCCACC
GACGTCCCCCGGACGTTTATTGCCAAGCTTTTTGTGAATGGGAAGGAAGT
CCTCAGCACCTCTTCGAAGCAGCAGGAAATGTGGTTGTGTGCCGTCGGCC
CCATTGTATACGACTCTGTGTATAACGGGGAAGTTTTCGACGGTCGGCTC
GCTGCTCGCCTTGTCGGTTGGGATGATCCGGCCTTCTTCAAAACCGGCAT
TTCTGGTGCTGCTGGTAGTGATGGATTTGCTGCCACGTGGGTACCTGCAG
TGGTTTCAAGCAACCCACCTACTGGTGAATTGATTTCTCCAAAGATGCCT
CCCATTCGTCGGATGGAAGAATTGGTGGCTATTTCTCTCACAGAACCACA
GCAAGGGGTGTTTGTCGTGGATTTTGGCCAGAATATCGCCGGGCGGGTAG
CACTGTCTTTGCCTAGAAGAGGGAAGGGGAGCGTGACTCTAAGGCATGCC
GAGGTGTTGCAACATGCAGGCATTGCGGCCGTGCCCGAACCTGGAATGAT
CTCGGTGGATAATTTGAGAGGCGCACGGGCAACAGATGTGTATATTTTTG
ATGAGGATGAAAGGGAAAATGGAAGGAAAGAAGCGGCGAGGAGAAGGGAG
GGAGAGGTGGAAGAAGAGGAGAGGGTGGTGTTTGAACCAACATTTACATA
TCATGGGTTTCGGTATGTGGAGATACGGGGATATGAGCCGCGGCTGAGTG
ATGTGAAAGCGATTGTTTTGCACACAGACGTCGTGCCCATTGGTGATATT
ACCTTCTCGGACGCGTTGCTGAATCAGATCCAAAAGGCGATCCATTGGGG
CCAACGGGCTAATATCATGTCAGTCCCCACCGACTGTCCTCAGCGGGATG
AACGCAAGGGATGGTTAGGAGATGCCCAGCTATCCGGGGAAGAGGCCTTG
TTTAATTTTGATATGGTTGCAACCTACTTAAAATTTGTCCGGGACATTAC
TGATACCCAGGATGCGGCAGGCCAGATTGGCGATACTGCTCCTTTTTCTA
TCGGGGGACGCCCGGCGGATCCTTCGTGGGGTTCAGCTTTCCCGAGCTTG
GTTTACTTTTTGTATGAAGAGACAGGAGATGTGGGTATTTTGGAGGAGTT
TTATCCTGCGTTGGCGAAGTATGTAGATTCGGTGCTGCTGGCGGCGGAGG
TTGCGGGGGTGGTGAACCTATACAAATCCTACGGCGATTGGTGTCCTGTA
CCGGGGCAGCCCATGTGCTCCCCGCACTTGACGGGCTCGTTTTCCTTCCT
TGAGAATCTGCAACAGCTATCCGATATGGCCTTTGCGATGGGGAAGGAGG
AGGACGGGAAAGTGTATGGGGCATATCATCGTTCTTTCACACGCGCATTC
CATGCCGCCTTTTACCATGGCGGGACCTATGATAATGGGGTTCAGACGTG
CCTTGCCCTCCCTTTGTGGGCGGGCGCCGTCCCGGCTGATTTGCAAAAGG
GGGTTGAGGAAAAGCTCGTAAGCGATTTGGTGGACACACAGAAGTACCAC
TCTACCACTGGCATCATCGGGATGAAATACATGTTGGAAGTATTATCGCG
CCTGGGAAAGACAGACGTAGCTGTCCAAATGCTGCAACAGAGGGATTATC
CTTCTTTTGGCTATATGCTCACGAACCCCCTCGAGCCGGCGACGACGATT
TGGGAGCTGTGGAACTCGGACCAGGCGGGCCCTGCGATGAATTCGCGCAA
TCACGTCATGTTTGGCGGGCCGGTCGGGGGATGGTTTTATAAGTACTTGG
GAGGGGTGAGAAAGGGGCCAGCAACGAGGGAGGGGGCTGGATACAGGCTG
GTAATATTTGCCCCGCCCTTGGCGGCTTGCATGCCGTTGGAGAAGGTGAC
GACGACGGTGCGGACGTTGCAGGGAGTGGTGGCGATGGAGTGGGAGCAAG
GAGCAGGGACCCTTCCCACTACTGCTGCTACTGCTGCTGCTGCTGTCGCT
ACATCTTCACTCTCGCTGGCGAGCCGCAACCTCTCCAACTCTTCCAGCCG
GCATCTTCAAGCATCGATTCAGGTGCCCTTGGGAAGCAAAAGTAGGGTTA
TTTTGGACGGACGGGCCCTTGGAGATGTCAATCCGATGTTGAGCGTTACT
GTAGATGGAGTTGATTTGAAACAAGCAATGAAGATGTCAGGGCAAGGACT
GGAGGTGCTGCAGGCGAGTGATGATTTTGTGGAATTACTGTTGGCATCGG
GGGGGTGGGCGATTGGGGTGAGGTTTGACGTGAGGGAGGACGAAGCGTTG
AAGTGTATAGCGCCGTCGGAGGTAAAGATGGTGAGTACGGCAATGGGCGT
GGGGGTGGGAGAGAGAGGAATGGCGGACTTTGCAGTGGTTACTGAAGGGG
TGATTGCTAGTGCATAAGGTTGGGTGAAAAGAAGAGTGTTTGTGTGTGCG
TATGAGTGCGAGTGTGGTTTGTTTGAGCCGGCGAGAGCATTCCTCTAACC
TCCTCTGCAGGTTTCTTCACACTACAATGAATAAGAAAGAGACAAGGAAA
GTGTCAGAGGAATCACATGTATGTGTAGGTGCAATTAAAGGAGATCATTT
GATATACTTCCGCGAGCGACAACGAAGGTAGACAGGTGTGGATATTTTTG
GAAAGATGCAGAAAAAGATAAAGAAGAACAAAAGTAGCAAGGACTATGAA
AAGGAGGGAAGTGTGCGCCTTCTCCACACTATCCTGGTGAACAAAAAATG
CTAGCTTCATCCTATACCGACGGTCACAGAGCAACCCCAAAAAATAAAGT
ACAAGAAAATAAAAAGAAAGAGTAAAACCACCCATCGTGTTGTGCGTGTG
TGTGGGTGTGACGCAGACTTACCCAAGCTGTTGGACTGAAAAACCTCGCA
CCCACACAATACTTTCGTTCCGTGCAGTATCCTTCAAAATTATTTGAAAT
ATTTCAATGCTAAAGCTTCAATCTGTTCCCCCCCGCCGTCCGCGCCAGCT
CCTTCGCCGTCTCTTGCCCCTTCTCCGTCACCTTCCTCTTCGCATACGCC
CCTCCATGCGCCGACACCTCCTCCTGAAGGCCCGCAAAGAACTTCCCGGA
AGTACTGTATGCGCCTTGTTGACTCGCTGCTTCCAACGTGCCTTGCACCA
CCTTCCCACTCGCCTTGATCTCTGACCGCATTTTCTCTTTCGCGTATTTG
TTCCCCAGACCGGGGTTGATGCGATTCACCAGTTTCTCCTCCGTTGCTGC
CTGCTTTCTGGCCTTGCGCCGTGCTGCCTTCTTATCCCTCCTAATCCTGT
TCCGATCCGCTTGGTCCAATTCCGCCGCTTCTCTCAACACCCCCTCCCTT
CCACGCTTCTTCCCATGCACCTCCTCCGGTGCCTGGGTGTCGGCGTGTCC
GACCGCCAAAGGCAACACCTCTTCCATCGCGATAGCAGGCACGTTCGCCT
GCACCGTCATCTCAACCTGTGCGGCCTTCGGGACGAAATTGAAGTTAGAC
AGCGCGTCCAATTTCCCACACACCAATCGAAACAATGCCGCCATCTCTAT
CTTTTCCCGAGTTTCCTTCGTCTCTTTCTCCCCTCCTTCCCCCCCCCCCT
GGCCCATGGCTAACCGCATGTACTCCTTCTCATAAATCGCTCCAAGGCCC
TCCGTCGACTTCTCCTGAGACACCTCCGGCAGCTCCTCCTCTCCCTCCCT
CCCCCTCCTCCTCCCGTTCATCATCACCTCCTCCCCTAATGTCTTGGGGA
CGACGTCATCCCACCTCTCTTCCATCACCCTCTGCTTGATCATCTGTTCA
ATGGACTGGCCCTTTTCAACCGTCATTAACACCTCGGGTCGTCGTGCCAG
CTCCACGTCCACCACTGCTTCCAAGAGCGAGTTCTCCGGCCTATCTCCCG
CCTTGACCTCTCCCCGCAATTCCCACGGGCGTTCCGACAACAACTCATGC
TCCAACTCGGCAATCTCCTTGCGTTTTGTTCGCTGCTGTCGCTGGAAGCT
TGTAAGGGTTTTAGGG
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protein sequence of NO01G03970.1

>NO01G03970.1-protein ID=NO01G03970.1-protein|Name=NO01G03970.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1069bp
MQLLAVPLSAMVATIACFSLADSLEYTITSQRVEYMPCPAMGIDVANPRF
AWVVEPSDISVRGAYQEAFRIIITAADAGREVIWDSGRVNNSESRHIRFG
SVGELPTAALASATAYDWTVTAWVATDVLPVSPSISSSTTTRKKAETTGA
VQSQPSPAARFVTGMLNASKDWAGADWLVAANSSTQNLCRAPFIVPNSEK
VERALLVMAGLGYFQASLNGARVSDAELESGWTDYGRRVPYSVYDVTGLI
KGGERGGGGNVLGISLGNGWYSTNGGAEPTDVPRTFIAKLFVNGKEVLST
SSKQQEMWLCAVGPIVYDSVYNGEVFDGRLAARLVGWDDPAFFKTGISGA
AGSDGFAATWVPAVVSSNPPTGELISPKMPPIRRMEELVAISLTEPQQGV
FVVDFGQNIAGRVALSLPRRGKGSVTLRHAEVLQHAGIAAVPEPGMISVD
NLRGARATDVYIFDEDERENGRKEAARRREGEVEEEERVVFEPTFTYHGF
RYVEIRGYEPRLSDVKAIVLHTDVVPIGDITFSDALLNQIQKAIHWGQRA
NIMSVPTDCPQRDERKGWLGDAQLSGEEALFNFDMVATYLKFVRDITDTQ
DAAGQIGDTAPFSIGGRPADPSWGSAFPSLVYFLYEETGDVGILEEFYPA
LAKYVDSVLLAAEVAGVVNLYKSYGDWCPVPGQPMCSPHLTGSFSFLENL
QQLSDMAFAMGKEEDGKVYGAYHRSFTRAFHAAFYHGGTYDNGVQTCLAL
PLWAGAVPADLQKGVEEKLVSDLVDTQKYHSTTGIIGMKYMLEVLSRLGK
TDVAVQMLQQRDYPSFGYMLTNPLEPATTIWELWNSDQAGPAMNSRNHVM
FGGPVGGWFYKYLGGVRKGPATREGAGYRLVIFAPPLAACMPLEKVTTTV
RTLQGVVAMEWEQGAGTLPTTAATAAAAVATSSLSLASRNLSNSSSRHLQ
ASIQVPLGSKSRVILDGRALGDVNPMLSVTVDGVDLKQAMKMSGQGLEVL
QASDDFVELLLASGGWAIGVRFDVREDEALKCIAPSEVKMVSTAMGVGVG
ERGMADFAVVTEGVIASA*
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mRNA from alignment at chr1:1057411..1062836+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO01G03970.1 ID=NO01G03970.1|Name=NO01G03970.1|organism=Nannochloropsis oceanica|type=mRNA|length=5426bp|location=Sequence derived from alignment at chr1:1057411..1062836+ (Nannochloropsis oceanica)
TGTTGCTTCTCCGTGCAGTATCAAGTGCCTTTTTGGTTACCTGAGCATGC CACACAAAGCAGCACATGAGCAAGGCGATAGATGCAGATGTACATGTGGT CTTTCTCACGCTTCCTAAAATATCCTTTCTGTGACAGGACGCAATCTGCC CTGTTGTGGCGCCTTGCAGCATACGGCTTGCTGGTACCTCCCGCAGGGTG ACACATCGATTTTCCCTGCCACCACCACATCTCTCCCCGGAGCAATTAGA ACACACACCAAGAGGTTTATTGAGATTGCTGCAGACTATGTGCTTTCATT GATTGTTCGACACACATACAAAACCATTACACTCATCCAGCCACAGCAAA TATCAACCGCCACGCCCTCACACGACCCCGTTCCTCGCACACCATTATGC GCACAGATCCATGCAGCTTCTAGCTGTTCCCCTCTCGGCGATGGTGGCAA CTATTGCTTGCTTCTCTCTGGCTGATTCTCTGGGTGCGTATGGACGGAAG GAGGGGAAATGGAGGGAAATCATTCACCATGATTGCCCTCTTCGGTCTTC TCAGGGCTCGCGACCACGCCAAGCTTTTGCCCAAAGTCTCCATCGTCATT CCCTTGCAGCCGGATAGCGACAGACACGACTTCTCCCACCAGATCATCTC CCCTTAATTCTCTCATTCATTACGATCCACAACCCAACGACAGAGTACAC CATTACCAGCCAGCGAGTCGAGTATATGCCCTGTCCCGCCATGGGGATCG ACGTGGCCAACCCACGGTTTGCGTGGGTGGTGGAGCCTTCTGATATATCC GTCCGTGGTGCCTACCAAGAGGCTTTTCGCATCATTATCACGGCTGCGGA TGCTGGCAGAGAAGTGATTTGGGATTCGGGGCGTGTCAACAATTCGGAGA GCCGGCACATAAGATTTGGCTCGGTGGGAGAGCTTCCCACAGCCGCTTTG GCTAGTGCGACTGCTTATGATTGGACGGTGACTGCGTGGGTGGCGACGGA TGTGTTGCCTGTGTCTCCCTCCATCTCCTCTTCCACCACGACGAGGAAGA AGGCGGAGACGACGGGAGCAGTGCAAAGCCAACCTTCGCCGGCAGCTCGT TTTGTGACGGGCATGCTAAATGCTTCCAAGGACTGGGCGGGGGCCGACTG GCTAGTGGCTGCCAATAGCTCCACACAAAATCTGTGTCGTGCACCATTTA TCGTCCCTAATAGCGAGAAGGTCGAGCGGGCGTTGTTGGTGATGGCGGGG TTGGGGTATTTCCAAGCGTCTTTGAATGGAGCGAGGGTCTCGGATGCTGA ATTAGAAAGCGGATGGACGGATTACGGACGACGGGTGCCTTATTCGGTCT ATGATGTCACAGGCTTGATAAAAGGAGGGGAAAGGGGTGGGGGTGGGAAT GTGTTGGGTATCTCTTTGGGCAATGGCTGGTATAGCACGAATGGAGGGGC GGAACCCACCGACGTCCCCCGGACGTTTATTGCCAAGCTTTTTGTGAATG GGAAGGAAGTCCTCAGCACCTCTTCGAAGCAGCAGGAAATGTGGTTGTGT GCCGTCGGCCCCATTGTATACGACTCTGTGTATAACGGGGAAGTTTTCGA CGGTCGGCTCGCTGCTCGCCTTGTCGGTTGGGATGATCCGGCCTTCTTCA AAACCGGCATTTCTGGTGCTGCTGGTAGTGATGGATTTGCTGCCACGTGG GTACCTGCAGTGGTTTCAAGCAACCCACCTACTGGTGAATTGATTTCTCC AAAGATGCCTCCCATTCGTCGGATGGAAGAATTGGTGGCTATTTCTCTCA CAGAACCACAGCAAGGGGTGTTTGTCGTGGATTTTGGCCAGAATATCGCC GGGCGGGTAGCACTGTCTTTGCCTAGAAGAGGGAAGGGGAGCGTGACTCT AAGGCATGCCGAGGTGTTGCAACATGCAGGCATTGCGGCCGTGCCCGAAC CTGGAATGATCTCGGTGGATAATTTGAGAGGCGCACGGGCAACAGATGTG TATATTTTTGATGAGGATGAAAGGGAAAATGGAAGGAAAGAAGCGGCGAG GAGAAGGGAGGGAGAGGTGGAAGAAGAGGAGAGGGTGGTGTTTGAACCAA CATTTACATATCATGGGTTTCGGTATGTGGAGATACGGGGATATGAGCCG CGGCTGAGTGATGTGAAAGCGATTGTTTTGCACACAGACGTCGTGCCCAT TGGTGATATTACCTTCTCGGACGCGTTGCTGAATCAGATCCAAAAGGCGA TCCATTGGGGCCAACGGGCTAATATCATGTCAGTCCCCACCGACTGTCCT CAGCGGGATGAACGCAAGGGATGGTTAGGAGATGCCCAGCTATCCGGGGA AGAGGCCTTGTTTAATTTTGATATGGTTGCAACCTACTTAAAATTTGTCC GGGACATTACTGATACCCAGGATGCGGCAGGCCAGATTGGCGATACTGCT CCTTTTTCTATCGGGGGACGCCCGGCGGATCCTTCGTGGGGTTCAGCTTT CCCGAGCTTGGTTTACTTTTTGTATGAAGAGACAGGAGATGTGGGTATTT TGGAGGAGTTTTATCCTGCGTTGGCGAAGTATGTAGATTCGGTGCTGCTG GCGGCGGAGGTTGCGGGGGTGGTGAACCTATACAAATCCTACGGCGATTG GTGTCCTGTACCGGGGCAGCCCATGTGCTCCCCGCACTTGACGGGCTCGT TTTCCTTCCTTGAGAATCTGCAACAGCTATCCGATATGGCCTTTGCGATG GGGAAGGAGGAGGACGGGAAAGTGTATGGGGCATATCATCGTTCTTTCAC ACGCGCATTCCATGCCGCCTTTTACCATGGCGGGACCTATGATAATGGGG TTCAGACGTGCCTTGCCCTCCCTTTGTGGGCGGGCGCCGTCCCGGCTGAT TTGCAAAAGGGGGTTGAGGAAAAGCTCGTAAGCGATTTGGTGGACACACA GAAGTACCACTCTACCACTGGCATCATCGGGATGAAATACATGTTGGAAG TATTATCGCGCCTGGGAAAGACAGACGTAGCTGTCCAAATGCTGCAACAG AGGGATTATCCTTCTTTTGGCTATATGCTCACGAACCCCCTCGAGCCGGC GACGACGATTTGGGAGCTGTGGAACTCGGACCAGGCGGGCCCTGCGATGA ATTCGCGCAATCACGTCATGTTTGGCGGGCCGGTCGGGGGATGGTTTTAT AAGTACTTGGGAGGGGTGAGAAAGGGGCCAGCAACGAGGGAGGGGGCTGG ATACAGGCTGGTAATATTTGCCCCGCCCTTGGCGGCTTGCATGCCGTTGG AGAAGGTGACGACGACGGTGCGGACGTTGCAGGGAGTGGTGGCGATGGAG TGGGAGCAAGGAGCAGGGACCCTTCCCACTACTGCTGCTACTGCTGCTGC TGCTGTCGCTACATCTTCACTCTCGCTGGCGAGCCGCAACCTCTCCAACT CTTCCAGCCGGCATCTTCAAGCATCGATTCAGGTGCCCTTGGGAAGCAAA AGTAGGGTTATTTTGGACGGACGGGCCCTTGGAGATGTCAATCCGATGTT GAGCGTTACTGTAGATGGAGTTGATTTGAAACAAGCAATGAAGATGTCAG GGCAAGGACTGGAGGTGCTGCAGGCGAGTGATGATTTTGTGGAATTACTG TTGGCATCGGGGGGGTGGGCGATTGGGGTGAGGTTTGACGTGAGGGAGGA CGAAGCGTTGAAGTGTATAGCGCCGTCGGAGGTAAAGATGGTGAGTACGG CAATGGGCGTGGGGGTGGGAGAGAGAGGAATGGCGGACTTTGCAGTGGTT ACTGAAGGGGTGATTGCTAGTGCATAAGGTTGGGTGAAAAGAAGAGTGTT TGTGTGTGCGTATGAGTGCGAGTGTGGTTTGTTTGAGCCGGCGAGAGCAT TCCTCTAACCTCCTCTGCAGGTTTCTTCACACTACAATGAATAAGAAAGA GACAAGGAAAGTGTCAGAGGAATCACATGTATGTGTAGGTGCAATTAAAG GAGATCATTTGATATACTTCCGCGAGCGACAACGAAGGTAGACAGGTGTG GATATTTTTGGAAAGATGCAGAAAAAGATAAAGAAGAACAAAAGTAGCAA GGACTATGAAAAGGAGGGAAGTGTGCGCCTTCTCCACACTATCCTGGTGA ACAAAAAATGCTAGCTTCATCCTATACCGACGGTCACAGAGCAACCCCAA AAAATAAAGTACAAGAAAATAAAAAGAAAGAGTAAAACCACCCATCGTGT TGTGCGTGTGTGTGGGTGTGACGCAGACTTACCCAAGCTGTTGGACTGAA AAACCTCGCACCCACACAATACTTTCGTTCCGTGCAGTATCCTTCAAAAT TATTTGAAATATTTCAATGCTAAAGCTTCAATCTGTTCCCCCCCGCCGTC CGCGCCAGCTCCTTCGCCGTCTCTTGCCCCTTCTCCGTCACCTTCCTCTT CGCATACGCCCCTCCATGCGCCGACACCTCCTCCTGAAGGCCCGCAAAGA ACTTCCCGGAAGTACTGTATGCGCCTTGTTGACTCGCTGCTTCCAACGTG CCTTGCACCACCTTCCCACTCGCCTTGATCTCTGACCGCATTTTCTCTTT CGCGTATTTGTTCCCCAGACCGGGGTTGATGCGATTCACCAGTTTCTCCT CCGTTGCTGCCTGCTTTCTGGCCTTGCGCCGTGCTGCCTTCTTATCCCTC CTAATCCTGTTCCGATCCGCTTGGTCCAATTCCGCCGCTTCTCTCAACAC CCCCTCCCTTCCACGCTTCTTCCCATGCACCTCCTCCGGTGCCTGGGTGT CGGCGTGTCCGACCGCCAAAGGCAACACCTCTTCCATCGCGATAGCAGGC ACGTTCGCCTGCACCGTCATCTCAACCTGTGCGGCCTTCGGGACGAAATT GAAGTTAGACAGCGCGTCCAATTTCCCACACACCAATCGAAACAATGCCG CCATCTCTATCTTTTCCCGAGTTTCCTTCGTCTCTTTCTCCCCTCCTTCC CCCCCCCCCTGGCCCATGGCTAACCGCATGTACTCCTTCTCATAAATCGC TCCAAGGCCCTCCGTCGACTTCTCCTGAGACACCTCCGGCAGCTCCTCCT CTCCCTCCCTCCCCCTCCTCCTCCCGTTCATCATCACCTCCTCCCCTAAT GTCTTGGGGACGACGTCATCCCACCTCTCTTCCATCACCCTCTGCTTGAT CATCTGTTCAATGGACTGGCCCTTTTCAACCGTCATTAACACCTCGGGTC GTCGTGCCAGCTCCACGTCCACCACTGCTTCCAAGAGCGAGTTCTCCGGC CTATCTCCCGCCTTGACCTCTCCCCGCAATTCCCACGGGCGTTCCGACAA CAACTCATGCTCCAACTCGGCAATCTCCTTGCGTTTTGTTCGCTGCTGTC GCTGGAAGCTTGTAAGGGTTTTAGGG
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Coding sequence (CDS) from alignment at chr1:1057411..1062836+

>NO01G03970.1 ID=NO01G03970.1|Name=NO01G03970.1|organism=Nannochloropsis oceanica|type=CDS|length=3207bp|location=Sequence derived from alignment at chr1:1057411..1062836+ (Nannochloropsis oceanica)
ATGCAGCTTCTAGCTGTTCCCCTCTCGGCGATGGTGGCAACTATTGCTTG
CTTCTCTCTGGCTGATTCTCTGGAGTACACCATTACCAGCCAGCGAGTCG
AGTATATGCCCTGTCCCGCCATGGGGATCGACGTGGCCAACCCACGGTTT
GCGTGGGTGGTGGAGCCTTCTGATATATCCGTCCGTGGTGCCTACCAAGA
GGCTTTTCGCATCATTATCACGGCTGCGGATGCTGGCAGAGAAGTGATTT
GGGATTCGGGGCGTGTCAACAATTCGGAGAGCCGGCACATAAGATTTGGC
TCGGTGGGAGAGCTTCCCACAGCCGCTTTGGCTAGTGCGACTGCTTATGA
TTGGACGGTGACTGCGTGGGTGGCGACGGATGTGTTGCCTGTGTCTCCCT
CCATCTCCTCTTCCACCACGACGAGGAAGAAGGCGGAGACGACGGGAGCA
GTGCAAAGCCAACCTTCGCCGGCAGCTCGTTTTGTGACGGGCATGCTAAA
TGCTTCCAAGGACTGGGCGGGGGCCGACTGGCTAGTGGCTGCCAATAGCT
CCACACAAAATCTGTGTCGTGCACCATTTATCGTCCCTAATAGCGAGAAG
GTCGAGCGGGCGTTGTTGGTGATGGCGGGGTTGGGGTATTTCCAAGCGTC
TTTGAATGGAGCGAGGGTCTCGGATGCTGAATTAGAAAGCGGATGGACGG
ATTACGGACGACGGGTGCCTTATTCGGTCTATGATGTCACAGGCTTGATA
AAAGGAGGGGAAAGGGGTGGGGGTGGGAATGTGTTGGGTATCTCTTTGGG
CAATGGCTGGTATAGCACGAATGGAGGGGCGGAACCCACCGACGTCCCCC
GGACGTTTATTGCCAAGCTTTTTGTGAATGGGAAGGAAGTCCTCAGCACC
TCTTCGAAGCAGCAGGAAATGTGGTTGTGTGCCGTCGGCCCCATTGTATA
CGACTCTGTGTATAACGGGGAAGTTTTCGACGGTCGGCTCGCTGCTCGCC
TTGTCGGTTGGGATGATCCGGCCTTCTTCAAAACCGGCATTTCTGGTGCT
GCTGGTAGTGATGGATTTGCTGCCACGTGGGTACCTGCAGTGGTTTCAAG
CAACCCACCTACTGGTGAATTGATTTCTCCAAAGATGCCTCCCATTCGTC
GGATGGAAGAATTGGTGGCTATTTCTCTCACAGAACCACAGCAAGGGGTG
TTTGTCGTGGATTTTGGCCAGAATATCGCCGGGCGGGTAGCACTGTCTTT
GCCTAGAAGAGGGAAGGGGAGCGTGACTCTAAGGCATGCCGAGGTGTTGC
AACATGCAGGCATTGCGGCCGTGCCCGAACCTGGAATGATCTCGGTGGAT
AATTTGAGAGGCGCACGGGCAACAGATGTGTATATTTTTGATGAGGATGA
AAGGGAAAATGGAAGGAAAGAAGCGGCGAGGAGAAGGGAGGGAGAGGTGG
AAGAAGAGGAGAGGGTGGTGTTTGAACCAACATTTACATATCATGGGTTT
CGGTATGTGGAGATACGGGGATATGAGCCGCGGCTGAGTGATGTGAAAGC
GATTGTTTTGCACACAGACGTCGTGCCCATTGGTGATATTACCTTCTCGG
ACGCGTTGCTGAATCAGATCCAAAAGGCGATCCATTGGGGCCAACGGGCT
AATATCATGTCAGTCCCCACCGACTGTCCTCAGCGGGATGAACGCAAGGG
ATGGTTAGGAGATGCCCAGCTATCCGGGGAAGAGGCCTTGTTTAATTTTG
ATATGGTTGCAACCTACTTAAAATTTGTCCGGGACATTACTGATACCCAG
GATGCGGCAGGCCAGATTGGCGATACTGCTCCTTTTTCTATCGGGGGACG
CCCGGCGGATCCTTCGTGGGGTTCAGCTTTCCCGAGCTTGGTTTACTTTT
TGTATGAAGAGACAGGAGATGTGGGTATTTTGGAGGAGTTTTATCCTGCG
TTGGCGAAGTATGTAGATTCGGTGCTGCTGGCGGCGGAGGTTGCGGGGGT
GGTGAACCTATACAAATCCTACGGCGATTGGTGTCCTGTACCGGGGCAGC
CCATGTGCTCCCCGCACTTGACGGGCTCGTTTTCCTTCCTTGAGAATCTG
CAACAGCTATCCGATATGGCCTTTGCGATGGGGAAGGAGGAGGACGGGAA
AGTGTATGGGGCATATCATCGTTCTTTCACACGCGCATTCCATGCCGCCT
TTTACCATGGCGGGACCTATGATAATGGGGTTCAGACGTGCCTTGCCCTC
CCTTTGTGGGCGGGCGCCGTCCCGGCTGATTTGCAAAAGGGGGTTGAGGA
AAAGCTCGTAAGCGATTTGGTGGACACACAGAAGTACCACTCTACCACTG
GCATCATCGGGATGAAATACATGTTGGAAGTATTATCGCGCCTGGGAAAG
ACAGACGTAGCTGTCCAAATGCTGCAACAGAGGGATTATCCTTCTTTTGG
CTATATGCTCACGAACCCCCTCGAGCCGGCGACGACGATTTGGGAGCTGT
GGAACTCGGACCAGGCGGGCCCTGCGATGAATTCGCGCAATCACGTCATG
TTTGGCGGGCCGGTCGGGGGATGGTTTTATAAGTACTTGGGAGGGGTGAG
AAAGGGGCCAGCAACGAGGGAGGGGGCTGGATACAGGCTGGTAATATTTG
CCCCGCCCTTGGCGGCTTGCATGCCGTTGGAGAAGGTGACGACGACGGTG
CGGACGTTGCAGGGAGTGGTGGCGATGGAGTGGGAGCAAGGAGCAGGGAC
CCTTCCCACTACTGCTGCTACTGCTGCTGCTGCTGTCGCTACATCTTCAC
TCTCGCTGGCGAGCCGCAACCTCTCCAACTCTTCCAGCCGGCATCTTCAA
GCATCGATTCAGGTGCCCTTGGGAAGCAAAAGTAGGGTTATTTTGGACGG
ACGGGCCCTTGGAGATGTCAATCCGATGTTGAGCGTTACTGTAGATGGAG
TTGATTTGAAACAAGCAATGAAGATGTCAGGGCAAGGACTGGAGGTGCTG
CAGGCGAGTGATGATTTTGTGGAATTACTGTTGGCATCGGGGGGGTGGGC
GATTGGGGTGAGGTTTGACGTGAGGGAGGACGAAGCGTTGAAGTGTATAG
CGCCGTCGGAGGTAAAGATGGTGAGTACGGCAATGGGCGTGGGGGTGGGA
GAGAGAGGAATGGCGGACTTTGCAGTGGTTACTGAAGGGGTGATTGCTAG
TGCATAA
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Synonyms
Publications