NO01G03580.1, NO01G03580.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G03580.1
Unique Name	NO01G03580.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3279
Alignment location	chr1:946500..950383 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:946500..950383 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO01G03580.1 vs.
Match: EWM29283.1 (calcium-dependent protein [Nannochloropsis gaditana])

HSP 1 Score: 1017.3 bits (2629), Expect = 2.600e-293
Identity = 530/729 (72.70%), Postives = 596/729 (81.76%), Query Frame = 0

Query:   27 MEQGMAKKLLEAQVDDGEDGKTNGVLQHYAYRAITFAERFLTSQPPSPEQAGRWFHTALVFLEVLKAGARLEFTDELERVRLYASQKTRMYSHLLGNLVPLNADKDVRDLYDFEDDKPALGQGSYGIVIKATHKQSGQHFACKILFVNRASTNSAKEITKLHSEVSIMRELDHPHIVRLREVFYARRRIYLIMDLCTGGNLLDFMKRHPNHPDSEPMAKDFLRQMLYAIKYLHEHQIVHRDLKLENWLLQSSHHSRQLKLIDFGLSKFFNKNELMVQSVGSLYYVAPEVLENGYSETCDMWSVGVIAYMLLFGRPPFWGNNNDQMRARIKNAQYSFPHDMRVSKCAKDFVQMLLVKDTAKRMTAHEALNHFFLVEDDLSEGGGGGSLQSLLARNKGLLPLSATVSSSLSSSSSISTGLSCTLTRAGFEEEEEEGVPHDQVLSSLVEFSAFGTLKRLILEVMAFNLTPIQIENLGRVFRAIDKKQKGTISLEDIKDYLMNEDEEVLIPQGIEAQMNAVEKILTSRKSHHEINYNDFVAAVMWRRIQYDEEKMHMVFEALDVHRQGFLTPDSIRQVVGLDKNQEEIDRMFKEADVNTDGCIDYSDFVKNWKRHVVDVQYTPMVKKIHQGQGGGKGKGGGEETGQGGGLPAVITPAGSSASTDCSVSSAGMGVTEGGVGGRMSMGAKIPATLPT-------LQMLGTGVRLVAPLSDASA--AQIRASICVT 747
            MEQG+ KKLL AQVDDGE+G+TNGVLQHYAYRAI FAERFLTS PP  +QAGRWFHTALVFLEVLKAGAR EFTDELERVRLYAS+KTRMYSHLLGNLVPLNADKDVRDLYDFEDDKPALGQGSYG+VIKATHKQ+GQHFACKILFVNR  TNSAKEITKLHSEVSIMRELDHPHIVRLREVFYARRRIY+IMDLCTGGNLLDFMK++PN PDSEPMA+DFLRQMLYA+KYLHEHQIVHRDLKLENWLLQS H +RQLKLIDFGLSKFFNKNE M+QSVGSLYYVAPEVLENGYSE CDMWS+GVIAYMLLFGRPPFWG+NNDQMR+RI+NAQ+SFP D+RVS  AK+FV+ LL+KDT +RMTAHEALNHFFL E        G +  +LL+R K L  L    SSS++SSS  S G S        EE++   VP DQVLSSLVE+SAFGTLKRLILEV+AFNLTP QI+++G+ FRAIDKKQKGTISLEDIK YLMNE++EVLIP GIEAQMNAVEK+LT   +HHEINYNDFVAA+MWRRIQYDEEKM +VFEALDVHRQGFLTP+SIRQVVGLDK QEEIDRMF EADVN DGCIDY+DF K+WKR+VVDVQY PMV+KI Q               +    P V  P GS  +T C+ +     + +     +  +GA I ATLP+       +Q++ + V+    L+ A    A  + +IC +
Sbjct:    1 MEQGVVKKLLAAQVDDGEEGQTNGVLQHYAYRAIAFAERFLTSNPPCLKQAGRWFHTALVFLEVLKAGARKEFTDELERVRLYASEKTRMYSHLLGNLVPLNADKDVRDLYDFEDDKPALGQGSYGVVIKATHKQTGQHFACKILFVNRTITNSAKEITKLHSEVSIMRELDHPHIVRLREVFYARRRIYMIMDLCTGGNLLDFMKQNPNRPDSEPMAQDFLRQMLYALKYLHEHQIVHRDLKLENWLLQSRHQNRQLKLIDFGLSKFFNKNETMMQSVGSLYYVAPEVLENGYSEACDMWSIGVIAYMLLFGRPPFWGSNNDQMRSRIRNAQFSFPPDLRVSNSAKEFVRRLLIKDTKQRMTAHEALNHFFLAEAPAKGTDCGNAPHTLLSRQKRLPSLHVGSSSSVNSSSP-SAGPSVDALSEDAEEQDIVTVPPDQVLSSLVEYSAFGTLKRLILEVIAFNLTPSQIQDMGQAFRAIDKKQKGTISLEDIKGYLMNEEKEVLIPMGIEAQMNAVEKVLTEHTAHHEINYNDFVAAIMWRRIQYDEEKMQVVFEALDVHRQGFLTPESIRQVVGLDKKQEEIDRMFAEADVNNDGCIDYTDFAKSWKRYVVDVQYAPMVEKIRQ---------------EFSDRP-VARPEGSQRNTSCATNRTSGTIIDTIGAAQTGIGADI-ATLPSGAPPVEDIQVMSSSVQSPDVLARAGTPNADSKQAICTS 711

The following BLAST results are available for this feature:

BLAST of NO01G03580.1 vs.

BLAST of NO01G03580.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM29283.1	2.600e-293	72.70	calcium-dependent protein [Nannochloropsis gaditan...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO01G03580	NO01G03580	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO01G03580.1	NO01G03580.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO01G03580.1.cds1	NO01G03580.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G03580.1.cds2	NO01G03580.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G03580.1.cds3	NO01G03580.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G03580.1.cds4	NO01G03580.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G03580.1.cds5	NO01G03580.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr1:946500..950383+
coding sequence from alignment at chr1:946500..950383+

mRNA sequence

>NO01G03580.1 ID=NO01G03580.1|Name=NO01G03580.1|organism=Nannochloropsis oceanica|type=mRNA|length=3279bp
CGAAATACTAATAGCATTTTACCGCAAATAGGGAGTAAGCGCACTGTCTA
CCGGTTTATGCTTTCCATGCTTTCCTTCTTGTTGAGGGCCTTTCCATACT
CCACACACACCATGGGCAGGCGATCCACCGAGTGACAGTCTCCATGCTTG
GTTGGAGGCACACACGTCCCCTCGAGCTTGTACATGTCGATGCCCGTTAG
GTCCGAGGAATCGTCTCGTCGCCATAGGCAATCAATCCCACACATTTGAC
CTTCCCGACGGCGTGCAGCCTCATGTCTTCACGCACATTGCACTTCTGTC
TCCTATACATATACACACACATATACACACAGGGAACGGTGGATGGGAAG
ATGGAGCAAGGCATGGCAAAGAAGCTGCTCGAGGCTCAAGTCGACGACGG
GGAAGACGGGAAGACCAATGGAGTCCTCCAGCATTACGCCTACAGAGCCA
TTACGTTTGCAGAGCGCTTCCTGACCAGCCAGCCACCCTCCCCCGAGCAA
GCAGGCCGATGGTTCCATACAGCGCTCGTCTTTCTAGAAGTGCTCAAGGC
CGGGGCGCGACTCGAGTTTACAGACGAGCTCGAACGCGTGCGCCTCTACG
CCTCCCAAAAAACCCGCATGTACAGCCACCTTCTCGGAAATCTCGTCCCA
CTTAACGCCGACAAGGATGTGCGAGATCTCTACGACTTCGAAGACGATAA
ACCCGCCCTGGGGCAAGGTTCCTACGGCATCGTCATTAAGGCTACCCATA
AGCAGAGCGGGCAGCACTTTGCGTGCAAAATTCTTTTTGTCAACCGCGCG
AGCACCAATAGCGCGAAAGAGATCACGAAATTGCACAGCGAGGTGTCGAT
CATGCGGGAGCTGGATCACCCCCATATAGTCCGTTTGCGTGAGGTCTTTT
ATGCCCGTCGTCGTATTTATTTAATTATGGATTTGTGCACTGGTGGAAAT
CTGCTAGATTTCATGAAACGGCACCCAAATCACCCTGATTCAGAGCCAAT
GGCCAAGGATTTTCTTCGGCAGATGCTCTATGCTATCAAGTACCTGCACG
AGCATCAAATCGTCCATCGAGACCTAAAGTTGGAAAACTGGTTGTTGCAG
TCTTCCCATCACAGTCGGCAGTTGAAGCTCATTGATTTTGGCCTGAGCAA
ATTTTTCAACAAGAATGAATTAATGGTACAGAGTGTCGGTTCGCTCTATT
ATGTTGCCCCCGAGGTCTTGGAGAACGGATATTCGGAAACCTGTGATATG
TGGTCTGTGGGGGTTATTGCCTATATGCTGCTGTTCGGTCGGCCCCCGTT
TTGGGGGAATAACAATGATCAAATGCGGGCAAGGATCAAAAATGCGCAGT
ATTCGTTTCCACATGATATGAGAGTGTCGAAGTGTGCAAAGGATTTCGTG
CAGATGTTGTTGGTGAAGGACACGGCGAAACGGATGACGGCGCATGAGGC
GTTGAATCACTTTTTCTTGGTCGAGGATGATCTCAGTGAGGGAGGGGGAG
GGGGTTCGTTGCAGAGCTTGCTGGCGAGGAATAAGGGGTTGTTGCCTCTC
AGTGCTACGGTTTCTTCGTCTTTATCCTCGTCCTCGAGCATTTCGACCGG
CCTCTCATGCACCTTAACCCGCGCCGGCTTTGAGGAAGAAGAGGAAGAAG
GAGTCCCCCACGACCAAGTCCTTAGCTCCCTCGTCGAATTCAGTGCATTC
GGAACTCTCAAGCGCCTCATCCTCGAGGTAATGGCTTTTAATCTTACTCC
CATTCAGATTGAGAATTTGGGGAGGGTGTTTCGTGCCATTGACAAGAAGC
AGAAGGGAACAATTTCTCTGGAAGATATCAAGGATTACTTAATGAATGAA
GACGAGGAGGTGCTGATTCCCCAAGGAATCGAAGCGCAGATGAACGCAGT
GGAGAAAATATTAACATCACGTAAATCACACCATGAGATTAACTACAATG
ATTTTGTGGCGGCAGTGATGTGGAGACGGATTCAGTACGACGAAGAGAAG
ATGCACATGGTGTTTGAGGCGCTCGATGTCCATCGGCAGGGTTTTTTGAC
ACCCGATTCGATACGGCAGGTGGTGGGCTTGGACAAGAATCAGGAGGAAA
TTGATCGGATGTTCAAGGAAGCGGACGTAAACACCGATGGGTGCATAGAC
TATTCTGACTTTGTCAAGAATTGGAAGAGGCATGTGGTGGATGTGCAGTA
TACACCGATGGTGAAGAAGATACACCAAGGGCAGGGGGGGGGGAAGGGGA
AAGGAGGGGGAGAAGAAACGGGACAGGGTGGGGGGTTACCCGCTGTGATT
ACTCCTGCGGGGAGTAGTGCCAGTACGGATTGTAGTGTAAGCAGTGCGGG
CATGGGCGTAACGGAGGGAGGGGTGGGAGGGAGGATGAGCATGGGAGCGA
AGATTCCAGCGACATTGCCGACGCTGCAGATGCTTGGAACTGGGGTTCGC
TTGGTGGCACCTTTGTCAGATGCCTCCGCAGCGCAGATTCGGGCGTCTAT
ATGTGTTACTTCAACCACAGCTGCTACTGCGGCGGTGGTGGAGGGTACGC
CTATTAAGGCGGCGAGAAGGAAGAAACAAGCGTCTATCGATGGGAACACC
ACCATCACCACCACCGATAGCACCAGTGGTAAAAAGGGCAAGAGAAAGCG
GGAGGAATCGCGCACTCAGGCTGCCTAGTCCTAAAGAATGACAGAGGGCG
CGCATTCAAGGGCTCAAAATCCGTACCATGAAATAGATAAAATAGGGAAA
GAGAGAGATTAAATAAATAAATGTGCGAGACAAAAGTAGATTGAGGGGGG
GAGATACACTCCCTCAAGGCGGAAAACTGTTCCCAAAATAGACATATCAA
AATGTGAAGGACGCGTCATTCCATGAATGACTGTGTGTAGTCATCCTCTG
GCAAAGACGAGGCACGATCCTACAGCACAACGTGCTTCTGCTGCCGACAC
CACTGCTACTACCAACGCTAACGAAATGAGGGAAGGACGACAATTAGAGG
AGTAAAACGAACACGCAGGAAAAGAAGTGAATGATGAAGAAGAGCAAGAA
GAGCCGCAATAACAACAATGAGGATAAGAAGAAGAACAAGAAAAACAAGA
AGAACAAGAACAAATCCGTATCGACAAGAAAAGGCAAAAGGCAAGCAGGG
TTAGAAAAGCGAATACAGAGAAAGATTAAGACAAGAAGAGAAAGACGCAT
CCAACGGAGCTTGGGCTGGGACAGAGAGAGTGAGATCACAGCAACAGCAG
ATGCAAACACGAGAGCACGCGTTCGGTAT

protein sequence of NO01G03580.1

>NO01G03580.1-protein ID=NO01G03580.1-protein|Name=NO01G03580.1|organism=Nannochloropsis oceanica|type=polypeptide|length=802bp
MSSRTLHFCLLYIYTHIYTQGTVDGKMEQGMAKKLLEAQVDDGEDGKTNG
VLQHYAYRAITFAERFLTSQPPSPEQAGRWFHTALVFLEVLKAGARLEFT
DELERVRLYASQKTRMYSHLLGNLVPLNADKDVRDLYDFEDDKPALGQGS
YGIVIKATHKQSGQHFACKILFVNRASTNSAKEITKLHSEVSIMRELDHP
HIVRLREVFYARRRIYLIMDLCTGGNLLDFMKRHPNHPDSEPMAKDFLRQ
MLYAIKYLHEHQIVHRDLKLENWLLQSSHHSRQLKLIDFGLSKFFNKNEL
MVQSVGSLYYVAPEVLENGYSETCDMWSVGVIAYMLLFGRPPFWGNNNDQ
MRARIKNAQYSFPHDMRVSKCAKDFVQMLLVKDTAKRMTAHEALNHFFLV
EDDLSEGGGGGSLQSLLARNKGLLPLSATVSSSLSSSSSISTGLSCTLTR
AGFEEEEEEGVPHDQVLSSLVEFSAFGTLKRLILEVMAFNLTPIQIENLG
RVFRAIDKKQKGTISLEDIKDYLMNEDEEVLIPQGIEAQMNAVEKILTSR
KSHHEINYNDFVAAVMWRRIQYDEEKMHMVFEALDVHRQGFLTPDSIRQV
VGLDKNQEEIDRMFKEADVNTDGCIDYSDFVKNWKRHVVDVQYTPMVKKI
HQGQGGGKGKGGGEETGQGGGLPAVITPAGSSASTDCSVSSAGMGVTEGG
VGGRMSMGAKIPATLPTLQMLGTGVRLVAPLSDASAAQIRASICVTSTTA
ATAAVVEGTPIKAARRKKQASIDGNTTITTTDSTSGKKGKRKREESRTQA
A*

mRNA from alignment at chr1:946500..950383+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO01G03580.1 ID=NO01G03580.1|Name=NO01G03580.1|organism=Nannochloropsis oceanica|type=mRNA|length=3884bp|location=Sequence derived from alignment at chr1:946500..950383+ (Nannochloropsis oceanica)
CGAAATACTAATAGCATTTTACCGCAAATAGGGAGTAAGCGCACTGTCTA
CCGGTTTATGCTTTCCATGCTTTCCTTCTTGTTGAGGGCCTTTCCATACT
CCACACACACCATGGGCAGGCGATCCACCGAGTGACAGTCTCCATGCTTG
GTTGGAGGCACACACGTCCCCTCGAGCTTGTACATGTCGATGCCCGTTAG
GTCCGAGGAATCGTCTCGTCGCCATAGGCAATCAATCCCACACATTTGAC
CTTCCCGACGGCGTGCAGCCTCATGTCTTCACGCACATTGCACTTCTGTC
TCCTATACATATACACACACATATACACACAGGGAACGGTGGATGGGAAG
ATGGAGCAAGGCATGGCAAAGAAGCTGCTCGAGGCTCAAGTCGACGACGG
GGAAGACGGGAAGACCAATGGAGTCCTCCAGCATTACGCCTACAGGTACA
TAGACACGCATAAAAGGCACTAGATGTTTGCCCACGCAAACGATTGCTCA
ATCTCACGACTGCCTTTATACTTTTACAGAGCCATTACGTTTGCAGAGCG
CTTCCTGACCAGCCAGCCACCCTCCCCCGAGCAAGCAGGCCGATGGTTCC
ATACAGGTTAGTAGTAGTAGGTTTGTGCGTGTATGCGTCTGTTCGTAAAT
AATTGGAAATGGAGTCATATTTCCCTTCCACACGCAAATGCACACATGAT
CAACCACAGCGCTCGTCTTTCTAGAAGTGCTCAAGGCCGGGGCGCGACTC
GAGTTTACAGACGGTACGTGCATGTATGGCAGCGTGAGCGTTGGGGTTTT
TGCTTTGGCAGCAGTCTTATCCCGTGTATATATGCAAATCTTTAAGTTGG
AATGATCTTGACGGTTGGAATCTCCTTGTTCGTTCTACCCTTCATATCTC
ACCCTTGTCCCAGCCACTCCCTCTAACCCTTCCCCCCCCCTCCCTCCCCT
TCCTGACGCCCAACAGAGCTCGAACGCGTGCGCCTCTACGCCTCCCAAAA
AACCCGCATGTACAGCCACCTTCTCGGAAATCTCGTCCCACTTAACGCCG
ACAAGGATGTGCGAGATCTCTACGACTTCGAAGACGATAAACCCGCCCTG
GGGCAAGGTTCCTACGGCATCGTCATTAAGGCTACCCATAAGCAGAGCGG
GCAGCACTTTGCGTGCAAAATTCTTTTTGTCAACCGCGCGAGCACCAATA
GCGCGAAAGAGATCACGAAATTGCACAGCGAGGTGTCGATCATGCGGGAG
CTGGATCACCCCCATATAGTCCGTTTGCGTGAGGTCTTTTATGCCCGTCG
TCGTATTTATTTAATTATGGATTTGTGCACTGGTGGAAATCTGCTAGATT
TCATGAAACGGCACCCAAATCACCCTGATTCAGAGCCAATGGCCAAGGAT
TTTCTTCGGCAGATGCTCTATGCTATCAAGTACCTGCACGAGCATCAAAT
CGTCCATCGAGACCTAAAGTTGGAAAACTGGTTGTTGCAGTCTTCCCATC
ACAGTCGGCAGTTGAAGCTCATTGATTTTGGCCTGAGCAAATTTTTCAAC
AAGAATGAATTAATGGTACAGAGTGTCGGTTCGCTCTATTATGTTGCCCC
CGAGGTCTTGGAGAACGGATATTCGGAAACCTGTGATATGTGGTCTGTGG
GGGTTATTGCCTATATGCTGCTGTTCGGTCGGCCCCCGTTTTGGGGGAAT
AACAATGATCAAATGCGGGCAAGGATCAAAAATGCGCAGTATTCGTTTCC
ACATGATATGAGAGTGTCGAAGTGTGCAAAGGATTTCGTGCAGATGTTGT
TGGTGAAGGACACGGCGAAACGGATGACGGCGCATGAGGCGTTGAATCAC
TTTTTCTTGGTCGAGGATGATCTCAGTGAGGGAGGGGGAGGGGGTTCGTT
GCAGAGCTTGCTGGCGAGGAATAAGGGGTTGTTGCCTCTCAGTGCTACGG
TTTCTTCGTCTTTATCCTCGTCCTCGAGCATTTCGACCGGTACGTGCTCC
TTTGAGGAGGATAGTCAAGTGTGTTTGGGTATGGTGGTGATTTCGCTTTT
CACTCTTTTTCTTTCACTCTTAAGTCTTCAGTCTGATGTTTGCGATTAGT
ACTCTCCTTTCTTTCTAAGTATTTATATATATTTCTTCTTTCTCTTTCTT
TCTATGCTTGACTTTAATCGTCCCCATCTCTATCCCCACACAAACACAAC
TTAGGCCTCTCATGCACCTTAACCCGCGCCGGCTTTGAGGAAGAAGAGGA
AGAAGGAGTCCCCCACGACCAAGTCCTTAGCTCCCTCGTCGAATTCAGTG
CATTCGGAACTCTCAAGCGCCTCATCCTCGAGGTAATGGCTTTTAATCTT
ACTCCCATTCAGATTGAGAATTTGGGGAGGGTGTTTCGTGCCATTGACAA
GAAGCAGAAGGGAACAATTTCTCTGGAAGATATCAAGGATTACTTAATGA
ATGAAGACGAGGAGGTGCTGATTCCCCAAGGAATCGAAGCGCAGATGAAC
GCAGTGGAGAAAATATTAACATCACGTAAATCACACCATGAGATTAACTA
CAATGATTTTGTGGCGGCAGTGATGTGGAGACGGATTCAGTACGACGAAG
AGAAGATGCACATGGTGTTTGAGGCGCTCGATGTCCATCGGCAGGGTTTT
TTGACACCCGATTCGATACGGCAGGTGGTGGGCTTGGACAAGAATCAGGA
GGAAATTGATCGGATGTTCAAGGAAGCGGACGTAAACACCGATGGGTGCA
TAGACTATTCTGACTTTGTCAAGAATTGGAAGAGGCATGTGGTGGATGTG
CAGTATACACCGATGGTGAAGAAGATACACCAAGGGCAGGGGGGGGGGAA
GGGGAAAGGAGGGGGAGAAGAAACGGGACAGGGTGGGGGGTTACCCGCTG
TGATTACTCCTGCGGGGAGTAGTGCCAGTACGGATTGTAGTGTAAGCAGT
GCGGGCATGGGCGTAACGGAGGGAGGGGTGGGAGGGAGGATGAGCATGGG
AGCGAAGATTCCAGCGACATTGCCGACGCTGCAGATGCTTGGAACTGGGG
TTCGCTTGGTGGCACCTTTGTCAGATGCCTCCGCAGCGCAGATTCGGGCG
TCTATATGTGTTACTTCAACCACAGCTGCTACTGCGGCGGTGGTGGAGGG
TACGCCTATTAAGGCGGCGAGAAGGAAGAAACAAGCGTCTATCGATGGGA
ACACCACCATCACCACCACCGATAGCACCAGTGGTAAAAAGGGCAAGAGA
AAGCGGGAGGAATCGCGCACTCAGGCTGCCTAGTCCTAAAGAATGACAGA
GGGCGCGCATTCAAGGGCTCAAAATCCGTACCATGAAATAGATAAAATAG
GGAAAGAGAGAGATTAAATAAATAAATGTGCGAGACAAAAGTAGATTGAG
GGGGGGAGATACACTCCCTCAAGGCGGAAAACTGTTCCCAAAATAGACAT
ATCAAAATGTGAAGGACGCGTCATTCCATGAATGACTGTGTGTAGTCATC
CTCTGGCAAAGACGAGGCACGATCCTACAGCACAACGTGCTTCTGCTGCC
GACACCACTGCTACTACCAACGCTAACGAAATGAGGGAAGGACGACAATT
AGAGGAGTAAAACGAACACGCAGGAAAAGAAGTGAATGATGAAGAAGAGC
AAGAAGAGCCGCAATAACAACAATGAGGATAAGAAGAAGAACAAGAAAAA
CAAGAAGAACAAGAACAAATCCGTATCGACAAGAAAAGGCAAAAGGCAAG
CAGGGTTAGAAAAGCGAATACAGAGAAAGATTAAGACAAGAAGAGAAAGA
CGCATCCAACGGAGCTTGGGCTGGGACAGAGAGAGTGAGATCACAGCAAC
AGCAGATGCAAACACGAGAGCACGCGTTCGGTAT

Coding sequence (CDS) from alignment at chr1:946500..950383+

>NO01G03580.1 ID=NO01G03580.1|Name=NO01G03580.1|organism=Nannochloropsis oceanica|type=CDS|length=2406bp|location=Sequence derived from alignment at chr1:946500..950383+ (Nannochloropsis oceanica)
ATGTCTTCACGCACATTGCACTTCTGTCTCCTATACATATACACACACAT
ATACACACAGGGAACGGTGGATGGGAAGATGGAGCAAGGCATGGCAAAGA
AGCTGCTCGAGGCTCAAGTCGACGACGGGGAAGACGGGAAGACCAATGGA
GTCCTCCAGCATTACGCCTACAGAGCCATTACGTTTGCAGAGCGCTTCCT
GACCAGCCAGCCACCCTCCCCCGAGCAAGCAGGCCGATGGTTCCATACAG
CGCTCGTCTTTCTAGAAGTGCTCAAGGCCGGGGCGCGACTCGAGTTTACA
GACGAGCTCGAACGCGTGCGCCTCTACGCCTCCCAAAAAACCCGCATGTA
CAGCCACCTTCTCGGAAATCTCGTCCCACTTAACGCCGACAAGGATGTGC
GAGATCTCTACGACTTCGAAGACGATAAACCCGCCCTGGGGCAAGGTTCC
TACGGCATCGTCATTAAGGCTACCCATAAGCAGAGCGGGCAGCACTTTGC
GTGCAAAATTCTTTTTGTCAACCGCGCGAGCACCAATAGCGCGAAAGAGA
TCACGAAATTGCACAGCGAGGTGTCGATCATGCGGGAGCTGGATCACCCC
CATATAGTCCGTTTGCGTGAGGTCTTTTATGCCCGTCGTCGTATTTATTT
AATTATGGATTTGTGCACTGGTGGAAATCTGCTAGATTTCATGAAACGGC
ACCCAAATCACCCTGATTCAGAGCCAATGGCCAAGGATTTTCTTCGGCAG
ATGCTCTATGCTATCAAGTACCTGCACGAGCATCAAATCGTCCATCGAGA
CCTAAAGTTGGAAAACTGGTTGTTGCAGTCTTCCCATCACAGTCGGCAGT
TGAAGCTCATTGATTTTGGCCTGAGCAAATTTTTCAACAAGAATGAATTA
ATGGTACAGAGTGTCGGTTCGCTCTATTATGTTGCCCCCGAGGTCTTGGA
GAACGGATATTCGGAAACCTGTGATATGTGGTCTGTGGGGGTTATTGCCT
ATATGCTGCTGTTCGGTCGGCCCCCGTTTTGGGGGAATAACAATGATCAA
ATGCGGGCAAGGATCAAAAATGCGCAGTATTCGTTTCCACATGATATGAG
AGTGTCGAAGTGTGCAAAGGATTTCGTGCAGATGTTGTTGGTGAAGGACA
CGGCGAAACGGATGACGGCGCATGAGGCGTTGAATCACTTTTTCTTGGTC
GAGGATGATCTCAGTGAGGGAGGGGGAGGGGGTTCGTTGCAGAGCTTGCT
GGCGAGGAATAAGGGGTTGTTGCCTCTCAGTGCTACGGTTTCTTCGTCTT
TATCCTCGTCCTCGAGCATTTCGACCGGCCTCTCATGCACCTTAACCCGC
GCCGGCTTTGAGGAAGAAGAGGAAGAAGGAGTCCCCCACGACCAAGTCCT
TAGCTCCCTCGTCGAATTCAGTGCATTCGGAACTCTCAAGCGCCTCATCC
TCGAGGTAATGGCTTTTAATCTTACTCCCATTCAGATTGAGAATTTGGGG
AGGGTGTTTCGTGCCATTGACAAGAAGCAGAAGGGAACAATTTCTCTGGA
AGATATCAAGGATTACTTAATGAATGAAGACGAGGAGGTGCTGATTCCCC
AAGGAATCGAAGCGCAGATGAACGCAGTGGAGAAAATATTAACATCACGT
AAATCACACCATGAGATTAACTACAATGATTTTGTGGCGGCAGTGATGTG
GAGACGGATTCAGTACGACGAAGAGAAGATGCACATGGTGTTTGAGGCGC
TCGATGTCCATCGGCAGGGTTTTTTGACACCCGATTCGATACGGCAGGTG
GTGGGCTTGGACAAGAATCAGGAGGAAATTGATCGGATGTTCAAGGAAGC
GGACGTAAACACCGATGGGTGCATAGACTATTCTGACTTTGTCAAGAATT
GGAAGAGGCATGTGGTGGATGTGCAGTATACACCGATGGTGAAGAAGATA
CACCAAGGGCAGGGGGGGGGGAAGGGGAAAGGAGGGGGAGAAGAAACGGG
ACAGGGTGGGGGGTTACCCGCTGTGATTACTCCTGCGGGGAGTAGTGCCA
GTACGGATTGTAGTGTAAGCAGTGCGGGCATGGGCGTAACGGAGGGAGGG
GTGGGAGGGAGGATGAGCATGGGAGCGAAGATTCCAGCGACATTGCCGAC
GCTGCAGATGCTTGGAACTGGGGTTCGCTTGGTGGCACCTTTGTCAGATG
CCTCCGCAGCGCAGATTCGGGCGTCTATATGTGTTACTTCAACCACAGCT
GCTACTGCGGCGGTGGTGGAGGGTACGCCTATTAAGGCGGCGAGAAGGAA
GAAACAAGCGTCTATCGATGGGAACACCACCATCACCACCACCGATAGCA
CCAGTGGTAAAAAGGGCAAGAGAAAGCGGGAGGAATCGCGCACTCAGGCT
GCCTAG

Synonyms

Publications