NO01G03150.2, NO01G03150.2 (mRNA) Nannochloropsis oceanica

Overview
NameNO01G03150.2
Unique NameNO01G03150.2
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2778
Alignment locationchr1:829750..834107 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:829750..834107 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
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BLAST of NO01G03150.2 vs.
Match: EWM29247.1 (proliferation-associated protein 2g4 [Nannochloropsis gaditana])

HSP 1 Score: 441.8 bits (1135), Expect = 1.700e-120
Identity = 225/279 (80.65%), Postives = 255/279 (91.40%), Query Frame = 0 
Query:    2 SESGDEVEAKRSTGEEE-DVDQSLANSDVTTKYQEAAKIANAVLEAMLAKVEPGVNPVDICRAGDEMIEEKCKKIFTKKVKGQAIEKGVAFPTCVSVNECVCHNSPLNSEAQEPLKEGDLVKVDLGVHIDGFVAVAAHTVRAGPAPTAEAPITGPTADVFLAALTAAEAATKLIKAGNTNQQVTDAVAKVAEAYGVNAMQGTLMHQMKRYIIDGNKVVILREDVDQKVDDITFEQGEVYCVDVAFSSGEGKPREATSRTTVYKRAVDVSYRLKMKASRY 280
            SESGD+++ K++ GEEE D D +LAN+DV+TKYQEAAKIAN  L+ +L+KVE G  P+++ +AGDE+IEEKCKKIFTKKVKG+ IEKGVAFPTCVS+NECVCHNSPL SEAQEPLKEGDLVKVDLGVHIDGFV+V AHTVR GPAPTAE PI GP ADVFLAALTA+E A KLIK GN+N+QVT+A+A+VAEA+GVNAMQGTLMHQMKRYIIDGNKV+ILREDVDQKVDD+ FEQGE+Y VDVAFSSGEGKPREATSRTTV+KRAVDVSYRLKMKASRY
Sbjct:    4 SESGDDLDVKKALGEEEEDADYTLANADVSTKYQEAAKIANVALDVVLSKVEVGKTPLELSQAGDEVIEEKCKKIFTKKVKGRTIEKGVAFPTCVSINECVCHNSPLASEAQEPLKEGDLVKVDLGVHIDGFVSVVAHTVRVGPAPTAEEPIKGPVADVFLAALTASEVAIKLIKPGNSNKQVTEAMARVAEAFGVNAMQGTLMHQMKRYIIDGNKVIILREDVDQKVDDVVFEQGEIYSVDVAFSSGEGKPREATSRTTVFKRAVDVSYRLKMKASRY 282
The following BLAST results are available for this feature:
BLAST of NO01G03150.2 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM29247.11.700e-12080.65proliferation-associated protein 2g4 [Nannochlorop... [more]
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G03150NO01G03150Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO01G03150.2NO01G03150.2-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO01G03150.2.cds1NO01G03150.2.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G03150.2.cds2NO01G03150.2.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G03150.2.cds3NO01G03150.2.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G03150.2.cds4NO01G03150.2.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO01G03150.2 ID=NO01G03150.2|Name=NO01G03150.2|organism=Nannochloropsis oceanica|type=mRNA|length=2778bp
TCGCCGAAGCCGAAGTAGGGCTGCCTGTGGTTGGCCGCTCGTTCTTCCCC
TTTTCCATGCTCTTTGTTTGCATACAGCGGCTGTCGTTCTCCCAACGTGC
GTAGTGACGGTGGTAGAAGCACTGCGTTCTCTGGATAGATTGGCTCTGGC
CAAGGGTGCAACTCACCAAGAGAAAAAGACCCTCGACGCAGAGGAGGCTG
CCAGGCCACACAGAGAGACGCCTTCTGCCATTTCTACTCACAGCCCGCCC
TTTCACACTAGCCATAGGCGCATAACTTAAGCACCCCGGTCCCGAGCGGC
GCATTTTTCTGGAGGGCCTCTGTCGTAAGCGATGCTGCTTCTGTGCGTCT
GCTAAGGCTGCTCACGTCTCACTTTTTCCAGGCACCCTCACCTCGATTTC
TTCTTTTGGAGGGCCGTGTATTAGGCGGAAGAAGTGTTGGGGTGCGGAAC
CCGCCAAGCAGAATTGGTGTGCTGTTATTGGTCCACGAGTTGTGTATGCT
AGCTAAACTTTGGATCAAAAAGACGACAAGGCGCACGTGTCTCTCGCTGC
GGTGTTCCTGAGAGAGAAAGAAAGGAGGCTTGCTGCCCGTTTTGACTGGC
GTGTTTGTGTGCGGTTGGCCAACGTTCGGGCACACTTTCCATTGTATTTA
CGAGTGCCGACGATTTTAACCGCTGTTCAAGCATTGTCGGCACCTTTAGA
GGCGGAATGCTTGTGTTGTCCTGACTTCCGGAGTCCTGTCTGAGCACAGA
CTGCCCATCGCATTTTCCGTAGTCTGGACTCGATTTTGCGGCCTCTAACG
CCAGATAAGTGTTGATTTACCATTCTCATGACAAATATCATTTCCTTTTC
CCTTCCTTTTCCCCTCATCCCTTGTCAACCGTCAACCAGATTCCGAGGCT
CATCGCGAAGACGCCACTACTGTTGTGACTTAGCAGCAGCAGTAACAGCA
CCACCATCATCAACACCCCATAAAGATGTCAGAGTCTGGGGACGAGGTCG
AGGCGAAGAGATCTACTGGGGAGGAGGAGGATGTGGACCAATCATTAGCG
AACAGCGACGTGACGACAAAGTATCAAGAGGCGGCCAAAATTGCCAACGC
CGTCCTAGAAGCCATGCTTGCCAAAGTTGAGCCAGGGGTGAACCCTGTGG
ATATCTGTCGTGCGGGGGATGAGATGATCGAAGAGAAATGCAAGAAGATC
TTTACAAAGAAAGTGAAGGGACAGGCGATCGAGAAGGGAGTGGCGTTCCC
GACGTGTGTGTCGGTGAATGAGTGTGTCTGCCATAATTCTCCCTTGAACT
CAGAGGCACAGGAGCCATTGAAGGAGGGGGACCTGGTGAAGGTTGATTTG
GGGGTACATATTGATGGATTTGTTGCCGTGGCTGCTCACACTGTCCGTGC
TGGCCCTGCTCCTACGGCTGAAGCACCCATCACGGGGCCGACGGCGGATG
TCTTCCTCGCTGCGTTGACTGCTGCGGAGGCTGCCACGAAATTGATCAAG
GCCGGTAACACTAACCAGCAAGTGACGGATGCCGTAGCGAAGGTGGCAGA
GGCATACGGTGTGAATGCCATGCAGGGGACGTTGATGCATCAAATGAAAC
GGTATATCATCGACGGGAACAAGGTGGTCATCCTTCGGGAGGACGTGGAT
CAGAAGGTGGATGACATAACCTTCGAGCAGGGGGAGGTTTACTGTGTGGA
CGTGGCGTTCAGCTCAGGCGAAGGCAAGCCCCGCGAAGCCACAAGCAGGA
CGACCGTCTACAAGCGGGCAGTGGACGTCAGCTACCGCCTCAAGATGAAG
GCTAGTCGGTACGAGTCGGAGCAAAGGAGGGATGGTTGGGGGAAATGGAT
TGAGAATGATGCTTTGTGTCTGTGCTGGAGAGGAGTGAGAGCATAAGCCT
ATTCCGGCGGTGCCTGCTTTGCCTGCAAACATCATCTGTCACCCTTTTGG
TTGTCATGCATCTACCCACACCGCACATACACACTGGTTCCGTTGTGTCC
ACCCACGCGCGTGCACACACACACACATACAATCACAATATTACCATCAC
ACGATCATACCATTACACAATCCCACATCACACATCACACGTAAACATGT
ACAGATATGTCTTTAACGAGATGAACCATCGCTTCCCCACATTGCCCTTT
TCGCTCCGAGCACTTGAGGACGAGAAGCAGGCGCGCATGGGCGTGGTGGA
GTGCTTAAAGCATGACCTTTTGCACCCTTATCCGGTGCTGATGGAAAGGC
CGGGCGATATCGTGGTGCACGTCAAGTCGACCGTGTTGCTGCTGCCCTCG
GGCACGGCCAAAGTGACGGGCTTGCCTTACAGCACCGCTGGCATCGTATC
CGAGAAGGAGCTCCCTGAGGATATCAAGGCCATCCTTGCGACTTCCTCCA
AGACTAACTCGAAGAAGAAGAGCAAAAGGAACAAGGACAAAAAGGTGGGG
GAGGCTTAAGTGAAAATGATTAGACGGGCGAAAAAATGTGAGAAAGGGAG
GGAAGGGGGAGGGAGTGGAGGGAGAAGCGAGACAAAGCCCGCCGCTGGAA
AGATGTGGGCTGTTCTGTGATAGTACCACCTTGTTATGATGACACAGCAC
CAGTGCATGTTTTCAAGAATTCAAAGTAAAGAAGTATGGATTGGAAAACG
GAAGACGGGGTAACTTGCGTGGGGCCGGAAGTCATTAGAACATAGTGGAG
TGACAAGGAAGAAACGGAATCGGAAATTGAAGGAGGAAAGGCTATAAAGA
AGCAAAACGCGCACGCGTAACGAAATGA
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protein sequence of NO01G03150.2

>NO01G03150.2-protein ID=NO01G03150.2-protein|Name=NO01G03150.2|organism=Nannochloropsis oceanica|type=polypeptide|length=307bp
MSESGDEVEAKRSTGEEEDVDQSLANSDVTTKYQEAAKIANAVLEAMLAK
VEPGVNPVDICRAGDEMIEEKCKKIFTKKVKGQAIEKGVAFPTCVSVNEC
VCHNSPLNSEAQEPLKEGDLVKVDLGVHIDGFVAVAAHTVRAGPAPTAEA
PITGPTADVFLAALTAAEAATKLIKAGNTNQQVTDAVAKVAEAYGVNAMQ
GTLMHQMKRYIIDGNKVVILREDVDQKVDDITFEQGEVYCVDVAFSSGEG
KPREATSRTTVYKRAVDVSYRLKMKASRYESEQRRDGWGKWIENDALCLC
WRGVRA*
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mRNA from alignment at chr1:829750..834107+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO01G03150.2 ID=NO01G03150.2|Name=NO01G03150.2|organism=Nannochloropsis oceanica|type=mRNA|length=4358bp|location=Sequence derived from alignment at chr1:829750..834107+ (Nannochloropsis oceanica)
TCGCCGAAGCCGAAGTAGGGCTGCCTGTGGTTGGCCGCTCGTTCTTCCCC
TTTTCCATGCTCTTTGTTTGCATACAGCGGCTGTCGTTCTCCCAACGTGC
GTAGTGACGGTGGTAGAAGCACTGCGTTCTCTGGATAGATTGGCTCTGGC
CAAGGGTGCAACTCACCAAGAGAAAAAGACCCTCGACGCAGAGGAGGCTG
CCAGGCCACACAGAGAGACGCCTTCTGCCATTTCTACTCACAGCCCGCCC
TTTCACACTAGCCATAGGCGCATAACTTAAGCACCCCGGTCCCGAGCGGC
GCATTTTTCTGGAGGGCCTCTGTCGTAAGCGATGCTGCTTCTGTGCGTCT
GCTAAGGCTGCTCACGTCTCACTTTTTCCAGGCACCCTCACCTCGATTTC
TTCTTTTGGAGGGCCGTGTATTAGGCGGAAGAAGTGTTGGGGTGCGGAAC
CCGCCAAGCAGAATTGGTGTGCTGTTATTGGTCCACGAGTTGTGTATGCT
AGCTAAACTTTGGATCAAAAAGACGACAAGGCGCACGTGTCTCTCGCTGC
GGTGTTCCTGAGAGAGAAAGAAAGGAGGCTTGCTGCCCGTTTTGACTGGC
GTGTTTGTGTGCGGTTGGCCAACGTTCGGGCACACTTTCCATTGTATTTA
CGAGTGCCGACGATTTTAACCGCTGTTCAAGCATTGTCGGCACCTTTAGA
GGCGGAATGCTTGTGTTGTCCTGACTTCCGGAGTCCTGTCTGAGCACAGA
CTGCCCATCGCATTTTCCGTAGTCTGGACTCGATTTTGCGGCCTCTAACG
CCAGATAAGTGTTGATTTACCATTCTCATGACAAATATCATTTCCTTTTC
CCTTCCTTTTCCCCTCATCCCTTGTCAACCGTCAACCAGATTCCGAGGCT
CATCGCGAAGACGCCACTACTGTTGTGACTTAGCAGCAGCAGTAACAGCA
CCACCATCATCAACACCCCATAAAGATGTCAGAGTCTGGGGACGAGGTCG
AGGCGAAGAGATCTACTGGGGAGGAGGAGGATGTGGACCAATCATTAGCG
AACAGCGACGTGACGACAAAGTATCAAGAGGCGGCCAAAATTGCCAACGC
CGTCCTAGAAGCCATGCTTGCCAAAGTTGAGCCAGGGGTGAACCCTGTGG
ATATCTGTCGTGCGGGGGATGAGATGATCGAAGAGAAATGCAAGAAGATC
TTTACAAAGAAAGTGAAGGGACAGGCGATCGAGAAGGGAGTGGCGTTCCC
GACGTGTGTGTCGGTGAATGAGTGTGTCTGCCATAATTCTCCCTTGAACT
CAGAGGCACAGGAGCCATTGAAGGAGGGGGACCTGGTGAAGGTTGATTTG
GGGGTACATATTGATGGATTTGTTGCCGTGGCTGCTCACACTGTCCGTGC
TGGTACGTATTTTCAGTGTTGGGCGGTGGTAGTAGTGGTGGTGAGTGTAG
GGCTTAAACGGAGGAAGGGAAGGGGACGATAGGGGGACGACCCTCTTTTG
AATTCGCACTTTCTTTTCCTCTTTCTTCTCTCTCATCAGTCTTTGTGTCA
CGTCATGCCCTGCTCCTACGGCTGAAGCGTTCACTACAGCCCCGACTGAC
AGGCGGGCTGATCAATGTCTTGTTCACTGCACTTGCGCTACGCAATATAT
CAAATTCCTGTCTCACGTCCCTCTCTCATTTACATGCCTCTTTTTAGGCC
CTGCTCCTACGGCTGAAGCACCCATCACGGGGCCGACGGCGGATGTCTTC
CTCGCTGCGTTGACTGCTGCGGAGGCTGCCACGAAATTGATCAAGGCCGG
TAACACTAACCAGCAAGTGACGGATGCCGTAGCGAAGGTGGCAGAGGCAT
ACGGTGTGAATGCCATGCAGGGGACGTTGATGCATCAAATGAAACGGTAC
GCCTTCGAAGGAGGGAGGGAGTGTGCGAAGAAGGAGGGGGGGTATGTAAA
TACACTTGTGCCTACGACACTGAGGGAGAACAAAAGGGAAGGGTGCGTCT
GTGTGAGAGATTATGTAGCAATGGCGCTGTCGACAGCACTATCTGTTTCC
TGGGTGGACAAATCCACGGTAGCTAGGACCGTCGGCCTCCAAGGGTGCTT
CGCGCATCCCCGCGAGCGCAGACTCTGACTTGCCCTACCAGTCCTCTTAA
AATCCAGAAGAGAAAGCACGTTCTTCTCATTCCTTTTTGAAATTTTGAAG
AGGAAAGATTGAGGTCTGTGCGGAGCTTGTGAGTGCACAAGGGGAAGGAA
GAGGGTGCCTGATGCCCTCTGTTTTCATGGCGTATGTGGTGATACCTCCT
TCCGACCCATTTACATCAATTATTAACTTTGCTCAATTTCAGGAAATGCA
TGAGAATTCTCGATTTGTATCGCTAGCGATAAGTCTCAGTGTCTTCCACC
TCTTCTTGTCTTCCTTTCTTCTCGATTTTCTTCCATTTCCCTCTCTCCCT
CAGGTATATCATCGACGGGAACAAGGTGGTCATCCTTCGGGAGGACGTGG
ATCAGAAGGTGGATGACATAACCTTCGAGCAGGGGGAGGTTTACTGTGTG
GACGTGGCGTTCAGCTCAGGCGAAGGTAAGTTCACATACGTGTGTGGGGG
AGGGAGCATGGTAAGAACCTTCCTCCTTTTGTTTTGTGGTGTATTTGAAT
TATTTCAGTACTCTTGCTTCTTCGAGTCATTTCAAGTTTGTCTATTTCAA
TCGAATGTTCCGAGATTTTTTCTGGCACCTCAGTGTTTGTTCGTATTTAT
GGCGCTCAATGCACGAATGAGTATCTATAGCCTTCTCCTAGTCTCAAAAA
GCGATTTTCTGACGGGATTAATCGTCATCGGCACGCTTTGGTAATCCTGC
ATGAGGCCCCTTTCTCTTGGAAGTGGGTTCCAAGGAAATCGGGTTTTGCT
GGCGTACCGGACATCTTTTAATTGTTCATATGTTACTGTATGCAGACATT
TCCCCATTTTAGTTAAAATGATTTTGTCTCCCTCGTACTCCCTGATTGCA
TGATTGGTCTGCAGGTCCACTTATGACACCGTACTCAAGTCACCGCCCAG
GTCAAATATATTTATCCTCTCGCTGACTGCTCATCCCCTGATAGCTTGTT
TTCCTTTCCACTCGGCCATAAATAAACTAATCATCATCCTCGTCTCTAGG
CAAGCCCCGCGAAGCCACAAGCAGGACGACCGTCTACAAGCGGGCAGTGG
ACGTCAGCTACCGCCTCAAGATGAAGGCTAGTCGGTACGAGTCGGAGCAA
AGGAGGGATGGTTGGGGGAAATGGATTGAGAATGATGCTTTGTGTCTGTG
CTGGAGAGGAGTGAGAGCATAAGCCTATTCCGGCGGTGCCTGCTTTGCCT
GCAAACATCATCTGTCACCCTTTTGGTTGTCATGCATCTACCCACACCGC
ACATACACACTGGTTCCGTTGTGTCCACCCACGCGCGTGCACACACACAC
ACATACAATCACAATATTACCATCACACGATCATACCATTACACAATCCC
ACATCACACATCACACGTAAACATGTACAGATATGTCTTTAACGAGATGA
ACCATCGCTTCCCCACATTGCCCTTTTCGCTCCGAGCACTTGAGGACGAG
AAGCAGGCGCGCATGGGCGTGGTGGAGTGCTTAAAGCATGACCTTTTGCA
CCCTTATCCGGTACGAGTTTTTATATATTTGCGTTTGTCTCTTTCTGGTA
GTGTTGACACTGAAGATGATTTGCCCAGACAAATAGAATAACGCTGAGTA
GTGTTAAAAAGCATCAGCACTCACATACATCTTTTCCTTCACTCCTCCTT
TTAATTTTTAACAGGTGCTGATGGAAAGGCCGGGCGATATCGTGGTGCAC
GTCAAGTCGACCGTGTTGCTGCTGCCCTCGGGCACGGCCAAAGTGACGGG
CTTGCCTTACAGCACCGCTGGCATCGTATCCGAGAAGGAGCTCCCTGAGG
ATATCAAGGCCATCCTTGCGACTTCCTCCAAGACTAACTCGAAGAAGAAG
AGCAAAAGGAACAAGGACAAAAAGGTGGGGGAGGCTTAAGTGAAAATGAT
TAGACGGGCGAAAAAATGTGAGAAAGGGAGGGAAGGGGGAGGGAGTGGAG
GGAGAAGCGAGACAAAGCCCGCCGCTGGAAAGATGTGGGCTGTTCTGTGA
TAGTACCACCTTGTTATGATGACACAGCACCAGTGCATGTTTTCAAGAAT
TCAAAGTAAAGAAGTATGGATTGGAAAACGGAAGACGGGGTAACTTGCGT
GGGGCCGGAAGTCATTAGAACATAGTGGAGTGACAAGGAAGAAACGGAAT
CGGAAATTGAAGGAGGAAAGGCTATAAAGAAGCAAAACGCGCACGCGTAA
CGAAATGA
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Coding sequence (CDS) from alignment at chr1:829750..834107+

>NO01G03150.2 ID=NO01G03150.2|Name=NO01G03150.2|organism=Nannochloropsis oceanica|type=CDS|length=921bp|location=Sequence derived from alignment at chr1:829750..834107+ (Nannochloropsis oceanica)
ATGTCAGAGTCTGGGGACGAGGTCGAGGCGAAGAGATCTACTGGGGAGGA
GGAGGATGTGGACCAATCATTAGCGAACAGCGACGTGACGACAAAGTATC
AAGAGGCGGCCAAAATTGCCAACGCCGTCCTAGAAGCCATGCTTGCCAAA
GTTGAGCCAGGGGTGAACCCTGTGGATATCTGTCGTGCGGGGGATGAGAT
GATCGAAGAGAAATGCAAGAAGATCTTTACAAAGAAAGTGAAGGGACAGG
CGATCGAGAAGGGAGTGGCGTTCCCGACGTGTGTGTCGGTGAATGAGTGT
GTCTGCCATAATTCTCCCTTGAACTCAGAGGCACAGGAGCCATTGAAGGA
GGGGGACCTGGTGAAGGTTGATTTGGGGGTACATATTGATGGATTTGTTG
CCGTGGCTGCTCACACTGTCCGTGCTGGCCCTGCTCCTACGGCTGAAGCA
CCCATCACGGGGCCGACGGCGGATGTCTTCCTCGCTGCGTTGACTGCTGC
GGAGGCTGCCACGAAATTGATCAAGGCCGGTAACACTAACCAGCAAGTGA
CGGATGCCGTAGCGAAGGTGGCAGAGGCATACGGTGTGAATGCCATGCAG
GGGACGTTGATGCATCAAATGAAACGGTATATCATCGACGGGAACAAGGT
GGTCATCCTTCGGGAGGACGTGGATCAGAAGGTGGATGACATAACCTTCG
AGCAGGGGGAGGTTTACTGTGTGGACGTGGCGTTCAGCTCAGGCGAAGGC
AAGCCCCGCGAAGCCACAAGCAGGACGACCGTCTACAAGCGGGCAGTGGA
CGTCAGCTACCGCCTCAAGATGAAGGCTAGTCGGTACGAGTCGGAGCAAA
GGAGGGATGGTTGGGGGAAATGGATTGAGAATGATGCTTTGTGTCTGTGC
TGGAGAGGAGTGAGAGCATAA
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Synonyms
Publications