NO01G02890.1, NO01G02890.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G02890.1
Unique Name	NO01G02890.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3148
Alignment location	chr1:749879..754221 -

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Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:749879..754221 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

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BLAST of NO01G02890.1 vs.
Match: XP_009525703.1 (hypothetical protein PHYSODRAFT_314358 [Phytophthora sojae]; EGZ16645.1 hypothetical protein PHYSODRAFT_314358 [Phytophthora sojae])

HSP 1 Score: 345.9 bits (886), Expect = 2.800e-91
Identity = 216/635 (34.02%), Postives = 331/635 (52.13%), Query Frame = 0

Query:   34 STDSSPTSNGVL--WKVFTELDTQDEADMIALAGFFQVLSESTLVKAVDMGSDVSEATSDDVGRGGQGQHELLEHHI---DPREKITLKIALDIIDCFRRGGKLQTLTVHKVLRDTYFMLKQFPNIRHANTTGADQKVTVVGDLHGQLTDLLYIIDAIGPPSDTNKIIFNGDFVDRGPASLQVTLILFALQLAAPEHIFLNRGNHEDASICCVYGFMKECLAAYDEITFSMFVEVFRHLPLATIIDSQVIVLHGGLFSQSGVSLEDLMAADRKMYSLDKSSMTPSQFQSSSPEKSPQTDDDAKRQHYLIELVTEMLWSDPQPIEGRLPNPRGEGIIFGTEPTIEFLKTNDLRLIVRSHECVRSGFDQPFEGDGKDLLCTIFSASNYAGSGNH-GAFMTFTTCAEDKGSNEVRPLDHITERNSEHVGATTDAMHKLYYTVHSYGGDTEEEEQDLQDTTRASLANLILRKKEPLRKAFEAEDAAKTGEVPMEVFAKVMEDVTQIHVEWRLLLPLLLPGRSEGIMVDYNQLL------GGFQLQLEGIST-AGKEQNRACFDGLYVNRRELEAMFAFFDKDNDGSISRAEFRQGCEALNAHLPAESQ--LTGLERVMDLLDFDRSGTIEVTEFFEGFR 654
            ST S+PT + ++  WK+F +L+ ++EA+++ L+ F   L     +  +D G    E     V +   G  ++   ++   +  E IT K   D+ID  R G K+    V +V+ +   + ++ P +       A+  +T++GDLHGQL DLL I+   G PSDTN  +FNGDFVDRG   +++ +I++  +L  P H+ LNRGNHE+ SI  V+GFMKEC   YD   + +F E FRHLPLAT+ID +V+V+HGG+  +  + + D    DR  Y L +    P   +   P             H  ++++ ++LWSDP+  +G   N RG G ++G +   +F+  N L L+VRSHECV  GFD P++  G  +L T+FSASNY G  N+ G FM          S + +P       N+E                           +D+  +   +L +LI++ +  L + FE ED  KTG++ ++ +  VMEDV  + +EW+ L PLL     EG +V YN  L      G  +    G S    +E+ R+ F+ LY +R  LEA+F   D+D +G+IS  E   G + LN HLP+ ++   T     M ++DF     I + EF EGFR
Sbjct:   67 STASTPTEDQIISNWKLFNDLENREEAEVLELSLFLDALVN--YIPGLDDGKPRPEP--HPVSQQEMGNIDIANMYVQGDELDEVITRKNVTDLIDSCRNGRKIPRNVVVRVINEAIALFRKDPTMVEFKIAPANH-ITIIGDLHGQLDDLLLILRENGLPSDTNPYLFNGDFVDRGDRGVEIAIIIYLFKLLYPRHVLLNRGNHEENSITQVFGFMKECEVKYDRFVYDLFCESFRHLPLATLIDDRVLVVHGGV-PRENILVRDFNTLDRAGYDLTRYRTKPKNRKEREP-------------HRKMQIIRDLLWSDPRASKGYEENKRGAGTVYGPDVVQKFMTKNKLALVVRSHECVPRGFDWPYKEKG--MLVTLFSASNYCGKANNLGCFMRVP-------SGKDKPAFFQYMANAES--------------------------RDMAVSNLDALFSLIVQYRSDLLEEFENEDKEKTGKLTVQTWGNVMEDVLDLSLEWKALQPLLTALDEEG-LVPYNDFLDRYNAEGALKRAESGESNDPEREKQRSAFNSLYRHRSRLEALFRVLDRDGNGTISVDELENGIKLLNEHLPSGTKPFSTNGADYMRMMDFSHDNEININEFMEGFR 646

The following BLAST results are available for this feature:

BLAST of NO01G02890.1 vs.

BLAST of NO01G02890.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
XP_009525703.1	2.800e-91	34.02	hypothetical protein PHYSODRAFT_314358 [Phytophtho...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO01G02890	NO01G02890	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO01G02890.1	NO01G02890.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO01G02890.1.cds1	NO01G02890.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G02890.1.cds2	NO01G02890.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G02890.1.cds3	NO01G02890.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G02890.1.cds4	NO01G02890.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G02890.1.cds5	NO01G02890.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G02890.1.cds6	NO01G02890.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G02890.1.cds7	NO01G02890.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G02890.1.cds8	NO01G02890.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr1:749879..754221-
coding sequence from alignment at chr1:749879..754221-

mRNA sequence

>NO01G02890.1 ID=NO01G02890.1|Name=NO01G02890.1|organism=Nannochloropsis oceanica|type=mRNA|length=3148bp
AATAGGCTGTCAGGACACGGGGCCAGACATGGGTAACTGTGCACGGGGCC
CCCCGAAGCAAACAAAGCAGACACCGGTTGTCAAAACAGGAGAGTACGTC
AAAGCTTTTCCGAAGCCGATACTGGTCTCAACGGATTCCAGCCCCACGTC
AAATGGCGTGCTTTGGAAGGTCTTCACCGAGCTCGACACCCAGGACGAGG
CCGACATGATTGCGTTGGCAGGCTTCTTTCAGGTGTTATCTGAGAGTACC
CTTGTCAAGGCAGTAGATATGGGGAGCGACGTGAGTGAGGCCACTTCTGA
TGATGTCGGGCGCGGGGGTCAGGGTCAGCATGAGTTGCTTGAGCACCATA
TCGATCCCAGGGAGAAGATCACACTAAAAATCGCGCTGGATATTATTGAT
TGCTTCCGTCGCGGCGGCAAGCTTCAAACCTTGACAGTTCACAAAGTCCT
CAGGGATACTTACTTTATGCTGAAGCAGTTTCCCAACATCCGACATGCCA
ACACGACTGGGGCGGACCAAAAAGTCACGGTTGTCGGCGATTTACACGGC
CAATTGACTGACTTGCTGTATATCATTGACGCTATTGGACCGCCTTCTGA
CACCAACAAGATCATATTCAATGGAGATTTTGTGGATAGAGGCCCCGCGT
CCTTGCAAGTGACTTTGATTCTCTTTGCCCTACAGCTTGCCGCCCCGGAG
CACATCTTCTTGAATCGCGGAAACCACGAGGATGCGAGTATATGTTGCGT
CTATGGCTTTATGAAAGAATGCCTAGCCGCGTACGATGAGATCACCTTCT
CCATGTTTGTGGAGGTCTTTCGTCACCTTCCCTTGGCGACCATAATCGAT
TCGCAGGTAATTGTCTTGCACGGCGGTCTTTTCAGCCAGTCTGGTGTCTC
GCTGGAGGACCTTATGGCTGCGGACAGAAAGATGTATAGCCTGGACAAGT
CGAGTATGACTCCAAGTCAATTCCAGTCTAGCTCGCCGGAAAAGTCCCCG
CAAACCGACGATGATGCTAAGAGGCAGCACTACTTAATTGAGCTTGTGAC
AGAGATGCTCTGGTCCGACCCTCAACCCATCGAAGGGCGGCTCCCGAATC
CGCGAGGGGAAGGAATCATTTTTGGGACCGAGCCGACAATTGAGTTCTTG
AAGACGAATGACTTGCGCTTGATAGTCCGATCGCATGAATGTGTCCGCTC
TGGATTCGATCAGCCCTTCGAGGGAGACGGGAAGGATCTTTTGTGTACCA
TTTTCAGTGCTAGTAACTACGCGGGCAGTGGGAACCACGGAGCCTTCATG
ACCTTCACTACCTGTGCGGAGGACAAGGGAAGTAACGAGGTCCGGCCACT
GGATCACATCACCGAGCGAAACAGTGAGCACGTAGGTGCTACCACTGATG
CCATGCACAAGCTTTATTACACTGTGCACTCATATGGCGGCGATACGGAA
GAGGAAGAACAAGATTTGCAGGACACGACACGGGCCAGCTTGGCAAACTT
GATCCTGAGGAAAAAGGAGCCCTTGCGAAAGGCATTTGAAGCAGAGGATG
CAGCCAAAACGGGCGAGGTACCGATGGAAGTGTTCGCCAAAGTGATGGAA
GACGTCACTCAAATTCACGTCGAATGGCGGCTGCTCTTGCCGCTGCTTCT
GCCTGGAAGGTCCGAGGGAATCATGGTCGATTACAACCAGCTCTTGGGAG
GATTCCAGTTACAGCTTGAGGGCATAAGCACCGCGGGCAAGGAACAAAAT
CGAGCATGCTTTGACGGTCTCTATGTGAACAGGCGGGAGCTGGAGGCTAT
GTTTGCCTTTTTTGATAAAGACAACGATGGATCCATAAGTAGGGCTGAAT
TCCGGCAAGGGTGCGAGGCATTGAATGCCCACCTGCCCGCAGAATCCCAG
CTAACAGGGCTTGAGCGCGTGATGGACCTGCTTGATTTCGATCGCAGTGG
AACAATTGAAGTGACCGAGTTCTTCGAGGGGTTCCGCTTCATGGACCTGA
GGGATGGAAAGGAAGATGGGAAGATTAACATTCCAATCAAATCTGCCGCG
GCAAAAACCTAACCCACATTTAATCTACATAGTTCGATTGGTGACGTGTT
GCTGCCACCTTGAGATCTGAATAATCTTCCTGCCCTTTATGTCCACAATA
TGCAAATAAGTTTCTAAGGTAGTCGTCCTCGAGCTACTGGTAAATCCTTC
TGTCAATAATCGCCTGATTAGTCAAGCATATTGTTGCTGCTTTCAAAATC
TCGTTTTCATAATGCTTGGAAATGAAATCGCAATCACCATTGAGGGTATT
AAGCCAGACACAACAAACCAAACAAGCCATAATATGATCGCTTCACTTTT
ATGCATTCTGTCTAATACACTAAATGCAAGGATAAAGTGGCTTTTTGGTG
ATTACACTTCAATTTACTTCAATTACTTTCGTTGCCTTGACTCGGGGTCG
TCATCATCCATACCCACTGCTCCTAATGGTGTTCCACGGCAAAAGGCTCC
GCCAAAACAACTCCGCCAGAGGCAGATTTGGATCAAGATAGTTGCGCCCT
CGCCCCATGCCATCGCCGTCGCCCCACAATTGCTGCTGAGGATGCTGGAA
ACCGCCCAACCCTCTTCCCCCTCCTCGGCGAAGACGCAATCGGCCACGCC
TGGCAACAGCTGGATCCGCCAAGGCCGGGTCGAGAGGGTTGAGGTCGGCA
GGTAATCGAGGCCACTCGTCACCATAGTCCGCGACGGCGACTCCGCGATA
CTTGTCCAAAGGATTGTGACCGTAGCCGTAGTGCCGAGACACCTCTTCCT
CCTCCAGCTTGTGCGCTCCTGGCTCCCGCTCAAACTCAATCAGCACGGCC
CAGGCTCCATCGAACAAAAATTGCATAGCCTCCGAGTCGCCGGCCCAAAG
ATCATAGCTTCGTTGCACGTAGACAGCCACCAAGCGCAAAAGCACGCATT
CCAGCGGCAAACGCGCCTCCGCATTGGCAAAGAAGGGGTGTCGCAAGACG
CCGTCCCTGTATATTCGTCATGTGTGGTAAAGGTACAACGAGGCAAATGT
GTGCAAGAAGAATACGTGAGGAAATAAATTTTGGATTTAAATTTAAACAA
ACAAGTTATAATTTTTGTCGCTCTTCTCTGTCTGTAATTGTTGCCGCT

protein sequence of NO01G02890.1

>NO01G02890.1-protein ID=NO01G02890.1-protein|Name=NO01G02890.1|organism=Nannochloropsis oceanica|type=polypeptide|length=678bp
MGNCARGPPKQTKQTPVVKTGEYVKAFPKPILVSTDSSPTSNGVLWKVFT
ELDTQDEADMIALAGFFQVLSESTLVKAVDMGSDVSEATSDDVGRGGQGQ
HELLEHHIDPREKITLKIALDIIDCFRRGGKLQTLTVHKVLRDTYFMLKQ
FPNIRHANTTGADQKVTVVGDLHGQLTDLLYIIDAIGPPSDTNKIIFNGD
FVDRGPASLQVTLILFALQLAAPEHIFLNRGNHEDASICCVYGFMKECLA
AYDEITFSMFVEVFRHLPLATIIDSQVIVLHGGLFSQSGVSLEDLMAADR
KMYSLDKSSMTPSQFQSSSPEKSPQTDDDAKRQHYLIELVTEMLWSDPQP
IEGRLPNPRGEGIIFGTEPTIEFLKTNDLRLIVRSHECVRSGFDQPFEGD
GKDLLCTIFSASNYAGSGNHGAFMTFTTCAEDKGSNEVRPLDHITERNSE
HVGATTDAMHKLYYTVHSYGGDTEEEEQDLQDTTRASLANLILRKKEPLR
KAFEAEDAAKTGEVPMEVFAKVMEDVTQIHVEWRLLLPLLLPGRSEGIMV
DYNQLLGGFQLQLEGISTAGKEQNRACFDGLYVNRRELEAMFAFFDKDND
GSISRAEFRQGCEALNAHLPAESQLTGLERVMDLLDFDRSGTIEVTEFFE
GFRFMDLRDGKEDGKINIPIKSAAAKT*

mRNA from alignment at chr1:749879..754221-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO01G02890.1 ID=NO01G02890.1|Name=NO01G02890.1|organism=Nannochloropsis oceanica|type=mRNA|length=4343bp|location=Sequence derived from alignment at chr1:749879..754221- (Nannochloropsis oceanica)
AATAGGCTGTCAGGACACGGGGCCAGACATGGGTAACTGTGCACGGGGCC
CCCCGAAGCAAACAAAGCAGGTAAATACCGTGTATCAACCTGCCGAAGTA
AACCAATGTGGAGTATAGTTTACCCAGAATCATGGATGGACGGATGCATA
TCTCAAGGTCATGCCGCCATTAGGCCGCGGAGTATTGTGCCAGTCAATCT
TTGGCCACCAGTGTGACTTTTAATGACTTTCAGTTGCGCCGCGGGCAATT
TTTAGGGGTTACTGCCCCGTACCGTACATCAAAGCGCAGTCTGGAGTGTT
TATGTCAGGACAACTAAGCTCCGCTCATTTGCTCTTCGCCAGTGCCAATC
GTCTCAAATAGTGCGACAGTGATCTTGTGTATACGGTTGTAATGTCTTGG
TTGCCCTACGGGACCGTGTCCCCTCCTTTCCTCAAGCGATGTACCTCTAC
AAATAAGGGCGGACAGACTGTACACCTCATTACTCACACACTAACTGCGT
CGTTTACATGGCTCCAAAAAAAGACACCGGTTGTCAAAACAGGAGAGTAC
GTCAAAGCTTTTCCGAAGCCGATACTGGTCTCAACGGATTCCAGCCCCAC
GTCAAATGGCGTGCTTTGGAAGGTCTTCACCGAGCTCGACACCCAGGACG
AGGCCGACATGATTGCGTTGGCAGGCTTCTTTCAGGTGTTATCTGGTATG
TGGTTTTCTTTAATGTCAATATACAACAGTAGACGTACTCAATTGCGAGC
ATTTCACCCACAACAGAGAGTACCCTTGTCAAGGCAGTAGATATGGGGAG
CGACGTGAGTGAGGCCACTTCTGATGATGTCGGGCGCGGGGGTCAGGGTC
AGCATGAGTTGCTTGAGCACCATATCGATCCCAGGGTAAGACATTAATGG
CATGGAGATTACCTTTTTTCTTTACACGTGTGTAAAAGCTTTTGAGCTCA
AGATCGAACATATACTCTAATCCACAGGAGAAGATCACACTAAAAATCGC
GCTGGATATTATTGATTGCTTCCGTCGCGGCGGCAAGGTAGGTGCTCCCT
AATTCTAAACCTATTCCTGTTCCTACTACCTTGCACATTCAACATGATGT
CTCAAGTCATTTATACCATTTACTTCAAAGCTTCAAACCTTGACAGTTCA
CAAAGTCCTCAGGGATACTTACTTTATGCTGAAGCAGTTTCCCAACATCC
GACATGCCAACACGACTGGGGCGGACCAAAAAGTCACGGTAAGGTCCAGA
CTTTGTACAGTGTATCCTTTTTCAAACACTTTGCACACCACTCCCATTTC
ATCCATTGACCATGAAGCGTGCGTAAATATTGTCACCTTAGCTGGTTTCT
CCTAACGATATCCTTACCATTAAACAACTAGGTTGTCGGCGATTTACACG
GCCAATTGACTGACTTGCTGTATATCATTGACGCTATTGGACCGCCTTCT
GACACCAACAAGATCATATTCAATGGAGATTTTGTGGATAGAGGCCCCGC
GTCCTTGCAAGTGACTTTGATTCTCTTTGCCCTACAGCTTGCCGCCCCGG
AGCACATCTTCTTGAATCGCGGAAACCACGAGGATGCGAGTATATGTTGC
GTCTATGGCTTTATGAAAGGTATGCCCAGCTTGAGGCAATTGAGTTTGTA
GGTGGTCTTGACTAACAGACAAATCCTTGACGTGAAACCGACAGAATGCC
TAGCCGCGTACGATGAGATCACCTTCTCCATGTTTGTGGAGGTCTTTCGT
CACCTTCCCTTGGCGACCATAATCGATTCGCAGGTAAGGCTTCAGGTAAA
GACGCCATTGCTGCATTTGTGGAGGACAGACTATGTTGGTGTCCAGAAAA
TGTCCTTGGTTTCCAGAAAACGTCCTTGGTTTTTAAAAAATGAGTGTGTA
CTAACATGACGCAAACACACGCGTAAGCGCGCATACTTGTACCTAGACAA
GTTGTAACCATGTTTACGGACATACACACACACACACACACACATACACA
CTCGCATATTGAACGCTTATAAAAGTATCTTTCCCCACCTTTTAAAACCA
GGTAATTGTCTTGCACGGCGGTCTTTTCAGCCAGTCTGGTGTCTCGCTGG
AGGACCTTATGGCTGCGGACAGAAAGATGTATAGCCTGGACAAGTCGAGT
ATGACTCCAAGTCAATTCCAGTCTAGCTCGCCGGAAAAGTCCCCGCAAAC
CGACGATGATGCTAAGAGGCAGCACTACTTAATTGAGCTTGTGACAGAGA
TGCTCTGGTCCGACCCTCAACCCATCGAAGGGCGGCTCCCGAATCCGCGA
GGGGAAGGAATCATTTTTGGGACCGAGCCGACAATTGAGTTCTTGAAGAC
GAATGACTTGCGCTTGATAGTCCGATCGCATGAATGTGTCCGCTCTGGAT
TCGATCAGCCCTTCGAGGGAGACGGGAAGGATCTTTTGTGTACCATTTTC
AGTGCTAGTAACTACGCGGGCAGTGGGAACCACGGAGCCTTCATGACCTT
CACTACCTGTGCGGAGGACAAGGGAAGTAACGAGGTCCGGCCACTGGATC
ACATCACCGAGCGAAACAGTGAGCACGTAGGTGCTACCACTGATGCCATG
CACAAGCTTTATTACACTGTGCACTCATATGGCGGCGATACGGAAGAGGA
AGAACAAGATTTGCAGGACACGACACGGGCCAGCTTGGCAAACTTGATCC
TGAGGAAAAAGGAGCCCTTGCGAAAGGCATTTGAAGCAGAGGATGCAGCC
AAAACGGGCGAGGTACCGATGGAAGTGTTCGCCAAAGTGATGGAAGACGT
CACTCAAATTCACGTCGAATGGCGGCTGCTCTTGCCGCTGCTTCTGCCTG
GAAGGTCCGAGGGAATCATGGTCGATTACAACCAGCTCTTGGGAGGATTC
CAGTTACAGCTTGAGGGCATAAGCACCGCGGGCAAGGAACAAAATCGAGC
ATGCTTTGACGGTCTCTATGTGAACAGGCGGGAGCTGGAGGCTATGTTTG
CCTTTTTTGATAAAGACAACGATGGATCCATAAGTAGGGCTGAATTCCGG
CAAGGGTGCGAGGCATTGAATGCCCACCTGCCCGCAGAATCCCAGCTAAC
AGGGCTTGAGCGCGTGATGGACCTGCTTGATTTCGATCGCAGTGGAACAA
TTGAAGTGACCGAGTTCTTCGAGGGGTTCCGCTTCATGGACCTGAGGGAT
GGAAAGGAAGATGGGAAGATTAACATTCCAATCAAATCTGCCGCGGCAAA
AACCTAACCCACATTTAATCTACATAGTTCGATTGGTGACGTGTTGCTGC
CACCTTGAGATCTGAATAATCTTCCTGCCCTTTATGTCCACAATATGCAA
ATAAGTTTCTAAGGTAGTCGTCCTCGAGCTACTGGTAAATCCTTCTGTCA
ATAATCGCCTGATTAGTCAAGCATATTGTTGCTGCTTTCAAAATCTCGTT
TTCATAATGCTTGGAAATGAAATCGCAATCACCATTGAGGGTATTAAGCC
AGACACAACAAACCAAACAAGCCATAATATGATCGCTTCACTTTTATGCA
TTCTGTCTAATACACTAAATGCAAGGATAAAGTGGCTTTTTGGTGATTAC
ACTTCAATTTACTTCAATTACTTTCGTTGCCTTGACTCGGGGTCGTCATC
ATCCATACCCACTGCTCCTAATGGTGTTCCACGGCAAAAGGCTCCGCCAA
AACAACTCCGCCAGAGGCAGATTTGGATCAAGATAGTTGCGCCCTCGCCC
CATGCCATCGCCGTCGCCCCACAATTGCTGCTGAGGATGCTGGAAACCGC
CCAACCCTCTTCCCCCTCCTCGGCGAAGACGCAATCGGCCACGCCTGGCA
ACAGCTGGATCCGCCAAGGCCGGGTCGAGAGGGTTGAGGTCGGCAGGTAA
TCGAGGCCACTCGTCACCATAGTCCGCGACGGCGACTCCGCGATACTTGT
CCAAAGGATTGTGACCGTAGCCGTAGTGCCGAGACACCTCTTCCTCCTCC
AGCTTGTGCGCTCCTGGCTCCCGCTCAAACTCAATCAGCACGGCCCAGGC
TCCATCGAACAAAAATTGCATAGCCTCCGAGTCGCCGGCCCAAAGATCAT
AGCTTCGTTGCACGTAGACAGCCACCAAGCGCAAAAGCACGCATTCCAGC
GGCAAACGCGCCTCCGCATTGGCAAAGAAGGGGTGTCGCAAGACGCCGTC
CCTGTATATTCGTCATGTGTGGTAAAGGTACAACGAGGCAAATGTGTGCA
AGAAGAATACGTGAGGAAATAAATTTTGGATTTAAATTTAAACAAACAAG
TTATAATTTTTGTCGCTCTTCTCTGTCTGTAATTGTTGCCGCT

Coding sequence (CDS) from alignment at chr1:749879..754221-

>NO01G02890.1 ID=NO01G02890.1|Name=NO01G02890.1|organism=Nannochloropsis oceanica|type=CDS|length=2034bp|location=Sequence derived from alignment at chr1:749879..754221- (Nannochloropsis oceanica)
ATGGGTAACTGTGCACGGGGCCCCCCGAAGCAAACAAAGCAGACACCGGT
TGTCAAAACAGGAGAGTACGTCAAAGCTTTTCCGAAGCCGATACTGGTCT
CAACGGATTCCAGCCCCACGTCAAATGGCGTGCTTTGGAAGGTCTTCACC
GAGCTCGACACCCAGGACGAGGCCGACATGATTGCGTTGGCAGGCTTCTT
TCAGGTGTTATCTGAGAGTACCCTTGTCAAGGCAGTAGATATGGGGAGCG
ACGTGAGTGAGGCCACTTCTGATGATGTCGGGCGCGGGGGTCAGGGTCAG
CATGAGTTGCTTGAGCACCATATCGATCCCAGGGAGAAGATCACACTAAA
AATCGCGCTGGATATTATTGATTGCTTCCGTCGCGGCGGCAAGCTTCAAA
CCTTGACAGTTCACAAAGTCCTCAGGGATACTTACTTTATGCTGAAGCAG
TTTCCCAACATCCGACATGCCAACACGACTGGGGCGGACCAAAAAGTCAC
GGTTGTCGGCGATTTACACGGCCAATTGACTGACTTGCTGTATATCATTG
ACGCTATTGGACCGCCTTCTGACACCAACAAGATCATATTCAATGGAGAT
TTTGTGGATAGAGGCCCCGCGTCCTTGCAAGTGACTTTGATTCTCTTTGC
CCTACAGCTTGCCGCCCCGGAGCACATCTTCTTGAATCGCGGAAACCACG
AGGATGCGAGTATATGTTGCGTCTATGGCTTTATGAAAGAATGCCTAGCC
GCGTACGATGAGATCACCTTCTCCATGTTTGTGGAGGTCTTTCGTCACCT
TCCCTTGGCGACCATAATCGATTCGCAGGTAATTGTCTTGCACGGCGGTC
TTTTCAGCCAGTCTGGTGTCTCGCTGGAGGACCTTATGGCTGCGGACAGA
AAGATGTATAGCCTGGACAAGTCGAGTATGACTCCAAGTCAATTCCAGTC
TAGCTCGCCGGAAAAGTCCCCGCAAACCGACGATGATGCTAAGAGGCAGC
ACTACTTAATTGAGCTTGTGACAGAGATGCTCTGGTCCGACCCTCAACCC
ATCGAAGGGCGGCTCCCGAATCCGCGAGGGGAAGGAATCATTTTTGGGAC
CGAGCCGACAATTGAGTTCTTGAAGACGAATGACTTGCGCTTGATAGTCC
GATCGCATGAATGTGTCCGCTCTGGATTCGATCAGCCCTTCGAGGGAGAC
GGGAAGGATCTTTTGTGTACCATTTTCAGTGCTAGTAACTACGCGGGCAG
TGGGAACCACGGAGCCTTCATGACCTTCACTACCTGTGCGGAGGACAAGG
GAAGTAACGAGGTCCGGCCACTGGATCACATCACCGAGCGAAACAGTGAG
CACGTAGGTGCTACCACTGATGCCATGCACAAGCTTTATTACACTGTGCA
CTCATATGGCGGCGATACGGAAGAGGAAGAACAAGATTTGCAGGACACGA
CACGGGCCAGCTTGGCAAACTTGATCCTGAGGAAAAAGGAGCCCTTGCGA
AAGGCATTTGAAGCAGAGGATGCAGCCAAAACGGGCGAGGTACCGATGGA
AGTGTTCGCCAAAGTGATGGAAGACGTCACTCAAATTCACGTCGAATGGC
GGCTGCTCTTGCCGCTGCTTCTGCCTGGAAGGTCCGAGGGAATCATGGTC
GATTACAACCAGCTCTTGGGAGGATTCCAGTTACAGCTTGAGGGCATAAG
CACCGCGGGCAAGGAACAAAATCGAGCATGCTTTGACGGTCTCTATGTGA
ACAGGCGGGAGCTGGAGGCTATGTTTGCCTTTTTTGATAAAGACAACGAT
GGATCCATAAGTAGGGCTGAATTCCGGCAAGGGTGCGAGGCATTGAATGC
CCACCTGCCCGCAGAATCCCAGCTAACAGGGCTTGAGCGCGTGATGGACC
TGCTTGATTTCGATCGCAGTGGAACAATTGAAGTGACCGAGTTCTTCGAG
GGGTTCCGCTTCATGGACCTGAGGGATGGAAAGGAAGATGGGAAGATTAA
CATTCCAATCAAATCTGCCGCGGCAAAAACCTAA

Synonyms

Publications