NO01G02730.1, NO01G02730.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO01G02730.1
Unique NameNO01G02730.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3449
Alignment locationchr1:706410..709968 +

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:706410..709968 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO01G02730.1 vs.
Match: XP_005856306.1 (phosphatidylinositol-bisphosphatase, partial [Nannochloropsis gaditana CCMP526]; EKU20056.1 phosphatidylinositol-bisphosphatase, partial [Nannochloropsis gaditana CCMP526])

HSP 1 Score: 1163.7 bits (3009), Expect = 0.000e+0
Identity = 582/773 (75.29%), Postives = 647/773 (83.70%), Query Frame = 0
Query:   12 QDVEFDPAAVSIIRQHWIDKQLKKRELEFTEYRTATVFCGTYNVNAKLIADEDVWQLESWLFSETEKPADIFAVGFQEIVDLNAVNVAMDGKSLQRAQAWQEKLSAVLNNTKGRDRYVLVGEKHLVGILILVFAKEMHLRNIREVYGATVGVGLMGMAGNKGGASIRLKFYDSYLCFVCAHLAAHRENVEGRNSDFANILQKTVFIDKAFSGEPGAPAPGLGDASEEMRKYFSEVLEVEPTLQTGVSILDHDVVFFIGDLNYRFDESVDTEECFAKIEAQDLEFLRRYDQLNMERNQGRVFVGFQEPVLRFPPTYKYQPGTPLYERRPEKKLRCPAWCDRILWRAKDPSQARCLTYRRAELCFSDHKPVAAQLQAKVRMVVKEKRQEVAAEIHRLLDKLENDQHPKVQIEVPGAAALVPPQPPNTIDFGLVRYGVEVRQTLVVTNVSSVAAQFRFVPKLEEETICKHWLSIKPRFGMLLPNEAAHITFTALIDLKTAQALNAGQDLLDDILILRLENGQDFFLSVNGTYARSAFGMSLEELTNCHVPVRSLPLPAAKWSPSTSAAATAAASSSNSKQAIAPPTSVGGPALSIPKELWRLVDALYRRGLTEKDLFILPGAPGEMQAVREALDAGAEIDEKASVHSLAEVLLAFLASLATPVVPGRLLPTIEIDAQNLRPWTRRFLEQLPPLNYNVFVYLISFFREVLKYHESNRLNTDKLATICCKTLVAGNGLSWGSGEDAAAGGVLDKGGGEDQRLESMHFVFQHFLTTSVF 785
            +DVEFDPAAVSIIRQHWID+QLKKRELEFTEYRT TVFCGTYNVNAK+IADE++ +LE WLF +  + ADIFAVGFQE+VDLNAVNVAMDGKS QRAQAWQ+KL AVLNN +  +RYVLV E+HLVGIL+LVF K +H + +REVYGA+VGVGLMGMAGNKGG S+RLKFYDSYLCFVCAHLAAHRENVEGRNSDF NILQKT+F+DKA S E   P  G GD +EE RKYFSEVL+VE TLQTG+SILDHDVVFF+GDLNYR DESVDTEECFAK++A DL+FL+RYDQLNMER QGRVF GF E  L F PTYKYQPGT  YERRPEKKLRCPAWCDRILWRAK+P Q RCL+Y RAEL  SDHKPVAAQL  KVRMVVK +RQEVAAEIHRLLDK+ENDQHPKV +EV   + L  P+P NTIDFG VRYGVE RQ L +TNVS+VAA FRFVPKLEEETICK WLSI+PRFGMLLPNE   I F  LIDLKTA+ LN G+DLLDDILILRLENGQDFFLSV GTYARSAFGM LE+L +CH PVR LPL AAKWS   S+ +TA        +   PPTSVGGP LS+PKELWRLVDALYRRGLTEKDLFI PG   E++AVREALD G E++E  SVHSL EVLL+FL SLA+PV+P  LLP++EIDAQ LRPWTRRFLE LPPLNYN+FVYLISFFREVLKYHESNRLNT+KLATIC KT +  N L WG   + A+G  + K G E QRL+SM  +F +FLTTSVF
Sbjct:   19 KDVEFDPAAVSIIRQHWIDRQLKKRELEFTEYRTVTVFCGTYNVNAKIIADEEIQRLEEWLFPDAGELADIFAVGFQEVVDLNAVNVAMDGKSQQRAQAWQDKLDAVLNNKRREERYVLVAERHLVGILLLVFVKGVHSKKVREVYGASVGVGLMGMAGNKGGVSMRLKFYDSYLCFVCAHLAAHRENVEGRNSDFTNILQKTIFVDKALSSEADTPVTGQGDVTEETRKYFSEVLDVESTLQTGISILDHDVVFFMGDLNYRLDESVDTEECFAKLKAHDLDFLQRYDQLNMERIQGRVFSGFSESPLNFLPTYKYQPGTSSYERRPEKKLRCPAWCDRILWRAKEPGQVRCLSYGRAELGLSDHKPVAAQLLTKVRMVVKAQRQEVAAEIHRLLDKVENDQHPKVTLEVFDNSTLGSPRPLNTIDFGPVRYGVECRQALTITNVSNVAAHFRFVPKLEEETICKSWLSIQPRFGMLLPNEVGQINFKILIDLKTAKMLNTGRDLLDDILILRLENGQDFFLSVGGTYARSAFGMDLEDLASCHGPVRFLPLTAAKWSQFQSSTSTA-------DKPHLPPTSVGGPTLSVPKELWRLVDALYRRGLTEKDLFIQPGVLTEVEAVREALDTGEELEENVSVHSLTEVLLSFLTSLASPVIPRNLLPSVEIDAQILRPWTRRFLELLPPLNYNIFVYLISFFREVLKYHESNRLNTEKLATICSKTFLPCNELHWGDSVEVASGPAVGK-GEEHQRLQSMQVIFHYFLTTSVF 783          
The following BLAST results are available for this feature:
BLAST of NO01G02730.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
XP_005856306.10.000e+075.29phosphatidylinositol-bisphosphatase, partial [Nann... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G02730NO01G02730Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO01G02730.1NO01G02730.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO01G02730.1.cds1NO01G02730.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO01G02730.1 ID=NO01G02730.1|Name=NO01G02730.1|organism=Nannochloropsis oceanica|type=mRNA|length=3449bp
TTCGTTATTGGCACGACGCCCTGTGTAGAATATAAGTGGTGTAAATGGGG
AGGAAAGATGGTGAGAAAGGTAAGGCAGAGATCGAGCCCAAGGGTGCCAT
GTCTTACAGAGACAGGGAGAGTCCAGGCCAGAATGGGGGTGAGAGGCCAA
CCCCACACGATTCCGAGCATTACGCCACCACAGCCAAAGACTTCTTCTCC
ATCCATAGACGTGATAGTATGGTAAGAAAAGCGGTAAGGACAGTGTGCGC
TTCCTAGATTGGCCACGCCAGTGAGGGCAACTCCAAGCTTTCGCCCCCTT
TCAATGTGCAACCTCGCTCCGGCAACAACAAGGAGAGCCACTCACAAGAA
AGCCTTGCTGTACTGAACGCATGGCGTCCAATCACTGGCCTTTTGAAGGT
TAAGAGCGCACATCTGGCGCCGAGAAAGATAAATAGAATCGTAGATTATC
TAATGGAGACCTTGGGGTATGCATAGGCTGCGTGGCAAGAGGACAGAGAG
GCGCGGCTGGCCGCCACAAAATCAAGTATCCAGGATTGCATGCGTGTGGG
CCGCTTTGCGCCTGTCAGAACGCAGAACGTCTTAGCGTCACGATGCGGCA
ACGGCTTTCTGCGTCTCCTGAATGTCACGTACACGTAGCGTCATTGCAAG
ACCACAAGCAATACGACCATCCAACCTACAAAGACAGGTCGGCGGCGGAC
CCGCCATGCCTCACGACTGCCAGCCGTCATCCCCCTCCCTTCTACGGCCT
TATCACAAGCCCCACGCCGCCTGGAATCATGTCTCCACACCACACCCTCT
GCACACTACATCCTCTACACACCAAACACACCACAAATCACGCACTTGGC
CACACGCAACAATTACCTCTATGTGGTTAGGGTTCGAGTGCTGTGTGCGC
GGCAGAGGCCACTCATGGCTTCTCCCCTTTTGTCCACAGATGATGAACAG
GACGTGGAATTTGACCCTGCTGCTGTCTCCATCATTCGCCAACACTGGAT
CGACAAGCAGCTCAAAAAGCGGGAGCTCGAGTTTACAGAGTATCGGACAG
CTACTGTCTTTTGCGGAACCTACAATGTCAACGCGAAGCTGATTGCGGAT
GAGGACGTATGGCAGCTGGAATCCTGGCTTTTTTCAGAAACGGAGAAGCC
CGCAGATATTTTCGCAGTCGGCTTCCAGGAAATCGTTGACCTGAACGCGG
TGAACGTGGCCATGGACGGCAAGTCCCTGCAGCGGGCCCAAGCATGGCAA
GAGAAGTTAAGTGCCGTCCTAAATAACACCAAGGGTAGGGATCGTTATGT
CCTTGTGGGGGAAAAGCACTTGGTGGGCATTTTAATTCTGGTGTTCGCGA
AGGAGATGCATTTGCGAAATATTCGGGAGGTGTACGGCGCGACAGTTGGG
GTGGGCTTGATGGGCATGGCGGGCAATAAAGGGGGAGCTTCAATCCGCCT
CAAGTTCTATGATTCGTACCTGTGTTTTGTGTGCGCGCATTTAGCGGCGC
ACCGAGAGAATGTAGAAGGTCGGAATAGCGATTTTGCTAATATTCTGCAG
AAGACTGTATTCATTGATAAGGCCTTTAGTGGCGAGCCCGGGGCACCGGC
GCCTGGGTTGGGGGACGCTAGTGAGGAGATGCGCAAATATTTTTCGGAGG
TGCTGGAGGTAGAGCCGACGTTGCAAACCGGTGTGTCCATTTTAGATCAC
GATGTCGTGTTTTTTATCGGCGATTTGAATTATCGCTTCGATGAGAGTGT
GGATACGGAGGAGTGCTTTGCCAAAATCGAGGCGCAGGATTTAGAATTTT
TGCGGCGATATGACCAGCTAAATATGGAGCGAAATCAAGGGAGGGTGTTC
GTAGGATTTCAAGAGCCGGTGCTGAGATTCCCGCCGACTTACAAATACCA
ACCAGGGACGCCTTTGTATGAGCGACGGCCGGAGAAGAAATTACGGTGCC
CTGCTTGGTGTGATCGTATCCTGTGGCGTGCAAAGGACCCAAGTCAAGCA
CGTTGTTTGACGTACCGGAGGGCGGAACTTTGTTTCTCGGACCATAAGCC
TGTTGCGGCGCAGTTGCAAGCCAAGGTACGGATGGTGGTGAAGGAGAAGC
GGCAAGAGGTGGCAGCAGAAATCCATCGTCTGCTCGACAAACTTGAAAAT
GATCAGCATCCGAAGGTCCAAATAGAAGTGCCAGGGGCTGCGGCTTTGGT
CCCGCCGCAACCGCCTAACACGATTGATTTTGGCCTCGTGCGATATGGGG
TGGAAGTTAGGCAGACATTGGTGGTGACGAATGTGTCGAGTGTGGCAGCG
CAATTTCGCTTCGTTCCCAAGCTGGAGGAGGAGACAATCTGCAAGCACTG
GTTGAGCATCAAGCCGCGCTTTGGCATGCTTTTGCCGAATGAAGCGGCTC
ATATTACGTTCACGGCTTTGATAGACCTTAAGACCGCACAAGCTCTCAAC
GCCGGCCAGGACCTTCTTGACGACATCCTAATTTTGCGTCTCGAGAACGG
ACAAGATTTCTTCCTCTCCGTCAACGGCACTTACGCCCGCTCCGCTTTTG
GGATGAGCCTCGAAGAACTCACCAACTGCCACGTACCTGTCCGCTCCCTT
CCCTTGCCCGCAGCAAAGTGGTCGCCTTCCACATCTGCCGCCGCCACGGC
CGCTGCCTCCAGCAGCAACAGCAAGCAAGCCATCGCTCCCCCTACTTCAG
TGGGTGGCCCCGCACTGTCAATACCCAAGGAATTGTGGCGGCTGGTCGAC
GCGCTTTATCGACGGGGGTTGACGGAGAAGGACTTGTTCATTCTGCCAGG
TGCTCCTGGGGAGATGCAGGCCGTGAGAGAGGCGTTGGATGCGGGCGCCG
AGATAGATGAGAAGGCTTCAGTTCACTCTTTGGCTGAGGTGCTTCTGGCG
TTTTTGGCCTCCCTTGCTACCCCTGTTGTGCCCGGTCGCTTGTTGCCCAC
TATTGAAATTGACGCTCAAAACCTACGACCGTGGACGAGGCGGTTTTTGG
AGCAGCTTCCGCCGTTGAACTACAATGTGTTTGTGTATTTGATTTCATTC
TTTCGGGAGGTTCTGAAGTACCATGAGTCGAATAGGCTTAACACAGATAA
GCTTGCAACCATATGCTGTAAGACTTTGGTTGCCGGAAATGGGTTGTCAT
GGGGTAGTGGGGAGGACGCGGCAGCTGGTGGCGTGTTGGACAAGGGCGGA
GGGGAGGACCAGCGCTTGGAGAGCATGCACTTTGTGTTTCAGCATTTTTT
GACAACTAGTGTATTTTAGAATGCTGTGATGTGTGGAAAGGGCTGGAAAA
GGAAGGATGGAGAGGATAAATGTTAATGTAGATATGTTAGTTTAGTTCAT
AAGTGCCAGTGGGATAAAAAAGGCACGGCGTCACTGAGAAGCTGGGGAGA
TTAGAGAAAGAAAGAAAGAGGCATAGAAAAAACGAAAGCATAACGCTCG
back to top

protein sequence of NO01G02730.1

>NO01G02730.1-protein ID=NO01G02730.1-protein|Name=NO01G02730.1|organism=Nannochloropsis oceanica|type=polypeptide|length=785bp
MASPLLSTDDEQDVEFDPAAVSIIRQHWIDKQLKKRELEFTEYRTATVFC
GTYNVNAKLIADEDVWQLESWLFSETEKPADIFAVGFQEIVDLNAVNVAM
DGKSLQRAQAWQEKLSAVLNNTKGRDRYVLVGEKHLVGILILVFAKEMHL
RNIREVYGATVGVGLMGMAGNKGGASIRLKFYDSYLCFVCAHLAAHRENV
EGRNSDFANILQKTVFIDKAFSGEPGAPAPGLGDASEEMRKYFSEVLEVE
PTLQTGVSILDHDVVFFIGDLNYRFDESVDTEECFAKIEAQDLEFLRRYD
QLNMERNQGRVFVGFQEPVLRFPPTYKYQPGTPLYERRPEKKLRCPAWCD
RILWRAKDPSQARCLTYRRAELCFSDHKPVAAQLQAKVRMVVKEKRQEVA
AEIHRLLDKLENDQHPKVQIEVPGAAALVPPQPPNTIDFGLVRYGVEVRQ
TLVVTNVSSVAAQFRFVPKLEEETICKHWLSIKPRFGMLLPNEAAHITFT
ALIDLKTAQALNAGQDLLDDILILRLENGQDFFLSVNGTYARSAFGMSLE
ELTNCHVPVRSLPLPAAKWSPSTSAAATAAASSSNSKQAIAPPTSVGGPA
LSIPKELWRLVDALYRRGLTEKDLFILPGAPGEMQAVREALDAGAEIDEK
ASVHSLAEVLLAFLASLATPVVPGRLLPTIEIDAQNLRPWTRRFLEQLPP
LNYNVFVYLISFFREVLKYHESNRLNTDKLATICCKTLVAGNGLSWGSGE
DAAAGGVLDKGGGEDQRLESMHFVFQHFLTTSVF*
back to top

mRNA from alignment at chr1:706410..709968+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO01G02730.1 ID=NO01G02730.1|Name=NO01G02730.1|organism=Nannochloropsis oceanica|type=mRNA|length=3559bp|location=Sequence derived from alignment at chr1:706410..709968+ (Nannochloropsis oceanica)
TTCGTTATTGGCACGACGCCCTGTGTAGAATATAAGTGGTGTAAATGGGG AGGAAAGATGGTGAGAAAGGTAAGGCAGAGATCGAGCCCAAGGGTGCCAT GTCTTACAGAGACAGGGAGAGTCCAGGCCAGAATGGGGGTGAGAGGCCAA CCCCACACGATTCCGAGCATTACGCCACCACAGCCAAAGACTTCTTCTCC ATCCATAGACGTGATAGTATGGTAAGAAAAGCGGTAAGGACAGTGTGCGC TTCCTAGATTGGCCACGCCAGTGAGGGCAACTCCAAGCTTTCGCCCCCTT TCAATGTGCAACCTCGCTCCGGCAACAACAAGGAGAGCCACTCACAAGAA AGCCTTGCTGTACTGAACGCATGGCGTCCAATCACTGGCCTTTTGAAGGT TAAGAGCGCACATCTGGCGCCGAGAAAGATAAATAGAATCGTAGATTATC TAATGGAGACCTTGGGGTATGCATAGGCTGCGTGGCAAGAGGACAGAGAG GCGCGGCTGGCCGCCACAAAATCAAGTATCCAGGATTGCATGCGTGTGGG CCGCTTTGCGCCTGTCAGAACGCAGAACGTCTTAGCGTCACGATGCGGCA ACGGCTTTCTGCGTCTCCTGAATGTCACGTACACGTAGCGTCATTGCAAG ACCACAAGCAATACGACCATCCAACCTACAAAGACAGGTCGGCGGCGGAC CCGCCATGCCTCACGACTGCCAGCCGTCATCCCCCTCCCTTCTACGGCCT TATCACAAGCCCCACGCCGCCTGGAATCATGTCTCCACACCACACCCTCT GCACACTACATCCTCTACACACCAAACACACCACAAATCACGCACTTGGC CACACGCAACAATTACCTCTATGTGGTTAGGGTTCGAGTGCTGTGTGCGC GGCAAGTCTTCCTGGTCGTGCCCTCAAAAAACCCATGCACCGCATTTACG TACCCACCTCCGTTGCATCCCCCCCTCATTCTCCCTCCCCTCCCCCTTCG CACAATCACAGGCAGAGGCCACTCATGGCTTCTCCCCTTTTGTCCACAGA TGATGAACAGGACGTGGAATTTGACCCTGCTGCTGTCTCCATCATTCGCC AACACTGGATCGACAAGCAGCTCAAAAAGCGGGAGCTCGAGTTTACAGAG TATCGGACAGCTACTGTCTTTTGCGGAACCTACAATGTCAACGCGAAGCT GATTGCGGATGAGGACGTATGGCAGCTGGAATCCTGGCTTTTTTCAGAAA CGGAGAAGCCCGCAGATATTTTCGCAGTCGGCTTCCAGGAAATCGTTGAC CTGAACGCGGTGAACGTGGCCATGGACGGCAAGTCCCTGCAGCGGGCCCA AGCATGGCAAGAGAAGTTAAGTGCCGTCCTAAATAACACCAAGGGTAGGG ATCGTTATGTCCTTGTGGGGGAAAAGCACTTGGTGGGCATTTTAATTCTG GTGTTCGCGAAGGAGATGCATTTGCGAAATATTCGGGAGGTGTACGGCGC GACAGTTGGGGTGGGCTTGATGGGCATGGCGGGCAATAAAGGGGGAGCTT CAATCCGCCTCAAGTTCTATGATTCGTACCTGTGTTTTGTGTGCGCGCAT TTAGCGGCGCACCGAGAGAATGTAGAAGGTCGGAATAGCGATTTTGCTAA TATTCTGCAGAAGACTGTATTCATTGATAAGGCCTTTAGTGGCGAGCCCG GGGCACCGGCGCCTGGGTTGGGGGACGCTAGTGAGGAGATGCGCAAATAT TTTTCGGAGGTGCTGGAGGTAGAGCCGACGTTGCAAACCGGTGTGTCCAT TTTAGATCACGATGTCGTGTTTTTTATCGGCGATTTGAATTATCGCTTCG ATGAGAGTGTGGATACGGAGGAGTGCTTTGCCAAAATCGAGGCGCAGGAT TTAGAATTTTTGCGGCGATATGACCAGCTAAATATGGAGCGAAATCAAGG GAGGGTGTTCGTAGGATTTCAAGAGCCGGTGCTGAGATTCCCGCCGACTT ACAAATACCAACCAGGGACGCCTTTGTATGAGCGACGGCCGGAGAAGAAA TTACGGTGCCCTGCTTGGTGTGATCGTATCCTGTGGCGTGCAAAGGACCC AAGTCAAGCACGTTGTTTGACGTACCGGAGGGCGGAACTTTGTTTCTCGG ACCATAAGCCTGTTGCGGCGCAGTTGCAAGCCAAGGTACGGATGGTGGTG AAGGAGAAGCGGCAAGAGGTGGCAGCAGAAATCCATCGTCTGCTCGACAA ACTTGAAAATGATCAGCATCCGAAGGTCCAAATAGAAGTGCCAGGGGCTG CGGCTTTGGTCCCGCCGCAACCGCCTAACACGATTGATTTTGGCCTCGTG CGATATGGGGTGGAAGTTAGGCAGACATTGGTGGTGACGAATGTGTCGAG TGTGGCAGCGCAATTTCGCTTCGTTCCCAAGCTGGAGGAGGAGACAATCT GCAAGCACTGGTTGAGCATCAAGCCGCGCTTTGGCATGCTTTTGCCGAAT GAAGCGGCTCATATTACGTTCACGGCTTTGATAGACCTTAAGACCGCACA AGCTCTCAACGCCGGCCAGGACCTTCTTGACGACATCCTAATTTTGCGTC TCGAGAACGGACAAGATTTCTTCCTCTCCGTCAACGGCACTTACGCCCGC TCCGCTTTTGGGATGAGCCTCGAAGAACTCACCAACTGCCACGTACCTGT CCGCTCCCTTCCCTTGCCCGCAGCAAAGTGGTCGCCTTCCACATCTGCCG CCGCCACGGCCGCTGCCTCCAGCAGCAACAGCAAGCAAGCCATCGCTCCC CCTACTTCAGTGGGTGGCCCCGCACTGTCAATACCCAAGGAATTGTGGCG GCTGGTCGACGCGCTTTATCGACGGGGGTTGACGGAGAAGGACTTGTTCA TTCTGCCAGGTGCTCCTGGGGAGATGCAGGCCGTGAGAGAGGCGTTGGAT GCGGGCGCCGAGATAGATGAGAAGGCTTCAGTTCACTCTTTGGCTGAGGT GCTTCTGGCGTTTTTGGCCTCCCTTGCTACCCCTGTTGTGCCCGGTCGCT TGTTGCCCACTATTGAAATTGACGCTCAAAACCTACGACCGTGGACGAGG CGGTTTTTGGAGCAGCTTCCGCCGTTGAACTACAATGTGTTTGTGTATTT GATTTCATTCTTTCGGGAGGTTCTGAAGTACCATGAGTCGAATAGGCTTA ACACAGATAAGCTTGCAACCATATGCTGTAAGACTTTGGTTGCCGGAAAT GGGTTGTCATGGGGTAGTGGGGAGGACGCGGCAGCTGGTGGCGTGTTGGA CAAGGGCGGAGGGGAGGACCAGCGCTTGGAGAGCATGCACTTTGTGTTTC AGCATTTTTTGACAACTAGTGTATTTTAGAATGCTGTGATGTGTGGAAAG GGCTGGAAAAGGAAGGATGGAGAGGATAAATGTTAATGTAGATATGTTAG TTTAGTTCATAAGTGCCAGTGGGATAAAAAAGGCACGGCGTCACTGAGAA GCTGGGGAGATTAGAGAAAGAAAGAAAGAGGCATAGAAAAAACGAAAGCA TAACGCTCG
back to top

Coding sequence (CDS) from alignment at chr1:706410..709968+

>NO01G02730.1 ID=NO01G02730.1|Name=NO01G02730.1|organism=Nannochloropsis oceanica|type=CDS|length=2355bp|location=Sequence derived from alignment at chr1:706410..709968+ (Nannochloropsis oceanica)
ATGGCTTCTCCCCTTTTGTCCACAGATGATGAACAGGACGTGGAATTTGA
CCCTGCTGCTGTCTCCATCATTCGCCAACACTGGATCGACAAGCAGCTCA
AAAAGCGGGAGCTCGAGTTTACAGAGTATCGGACAGCTACTGTCTTTTGC
GGAACCTACAATGTCAACGCGAAGCTGATTGCGGATGAGGACGTATGGCA
GCTGGAATCCTGGCTTTTTTCAGAAACGGAGAAGCCCGCAGATATTTTCG
CAGTCGGCTTCCAGGAAATCGTTGACCTGAACGCGGTGAACGTGGCCATG
GACGGCAAGTCCCTGCAGCGGGCCCAAGCATGGCAAGAGAAGTTAAGTGC
CGTCCTAAATAACACCAAGGGTAGGGATCGTTATGTCCTTGTGGGGGAAA
AGCACTTGGTGGGCATTTTAATTCTGGTGTTCGCGAAGGAGATGCATTTG
CGAAATATTCGGGAGGTGTACGGCGCGACAGTTGGGGTGGGCTTGATGGG
CATGGCGGGCAATAAAGGGGGAGCTTCAATCCGCCTCAAGTTCTATGATT
CGTACCTGTGTTTTGTGTGCGCGCATTTAGCGGCGCACCGAGAGAATGTA
GAAGGTCGGAATAGCGATTTTGCTAATATTCTGCAGAAGACTGTATTCAT
TGATAAGGCCTTTAGTGGCGAGCCCGGGGCACCGGCGCCTGGGTTGGGGG
ACGCTAGTGAGGAGATGCGCAAATATTTTTCGGAGGTGCTGGAGGTAGAG
CCGACGTTGCAAACCGGTGTGTCCATTTTAGATCACGATGTCGTGTTTTT
TATCGGCGATTTGAATTATCGCTTCGATGAGAGTGTGGATACGGAGGAGT
GCTTTGCCAAAATCGAGGCGCAGGATTTAGAATTTTTGCGGCGATATGAC
CAGCTAAATATGGAGCGAAATCAAGGGAGGGTGTTCGTAGGATTTCAAGA
GCCGGTGCTGAGATTCCCGCCGACTTACAAATACCAACCAGGGACGCCTT
TGTATGAGCGACGGCCGGAGAAGAAATTACGGTGCCCTGCTTGGTGTGAT
CGTATCCTGTGGCGTGCAAAGGACCCAAGTCAAGCACGTTGTTTGACGTA
CCGGAGGGCGGAACTTTGTTTCTCGGACCATAAGCCTGTTGCGGCGCAGT
TGCAAGCCAAGGTACGGATGGTGGTGAAGGAGAAGCGGCAAGAGGTGGCA
GCAGAAATCCATCGTCTGCTCGACAAACTTGAAAATGATCAGCATCCGAA
GGTCCAAATAGAAGTGCCAGGGGCTGCGGCTTTGGTCCCGCCGCAACCGC
CTAACACGATTGATTTTGGCCTCGTGCGATATGGGGTGGAAGTTAGGCAG
ACATTGGTGGTGACGAATGTGTCGAGTGTGGCAGCGCAATTTCGCTTCGT
TCCCAAGCTGGAGGAGGAGACAATCTGCAAGCACTGGTTGAGCATCAAGC
CGCGCTTTGGCATGCTTTTGCCGAATGAAGCGGCTCATATTACGTTCACG
GCTTTGATAGACCTTAAGACCGCACAAGCTCTCAACGCCGGCCAGGACCT
TCTTGACGACATCCTAATTTTGCGTCTCGAGAACGGACAAGATTTCTTCC
TCTCCGTCAACGGCACTTACGCCCGCTCCGCTTTTGGGATGAGCCTCGAA
GAACTCACCAACTGCCACGTACCTGTCCGCTCCCTTCCCTTGCCCGCAGC
AAAGTGGTCGCCTTCCACATCTGCCGCCGCCACGGCCGCTGCCTCCAGCA
GCAACAGCAAGCAAGCCATCGCTCCCCCTACTTCAGTGGGTGGCCCCGCA
CTGTCAATACCCAAGGAATTGTGGCGGCTGGTCGACGCGCTTTATCGACG
GGGGTTGACGGAGAAGGACTTGTTCATTCTGCCAGGTGCTCCTGGGGAGA
TGCAGGCCGTGAGAGAGGCGTTGGATGCGGGCGCCGAGATAGATGAGAAG
GCTTCAGTTCACTCTTTGGCTGAGGTGCTTCTGGCGTTTTTGGCCTCCCT
TGCTACCCCTGTTGTGCCCGGTCGCTTGTTGCCCACTATTGAAATTGACG
CTCAAAACCTACGACCGTGGACGAGGCGGTTTTTGGAGCAGCTTCCGCCG
TTGAACTACAATGTGTTTGTGTATTTGATTTCATTCTTTCGGGAGGTTCT
GAAGTACCATGAGTCGAATAGGCTTAACACAGATAAGCTTGCAACCATAT
GCTGTAAGACTTTGGTTGCCGGAAATGGGTTGTCATGGGGTAGTGGGGAG
GACGCGGCAGCTGGTGGCGTGTTGGACAAGGGCGGAGGGGAGGACCAGCG
CTTGGAGAGCATGCACTTTGTGTTTCAGCATTTTTTGACAACTAGTGTAT
TTTAG
back to top
Synonyms
Publications