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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr1 | genome | chr1:684878..688553 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO01G02660.2 ID=NO01G02660.2|Name=NO01G02660.2|organism=Nannochloropsis oceanica|type=mRNA|length=3563bp
TATTTTTCTTTTTGTCATCGACTCACACGTGTTATTACAGCTGACAGATA
CAAAGTTGCCGAGTGATCCCCCTCACTCTTATCCCCTGTGATCCCGTTTC
TAACTCTTCTATACATTTTTGCGTGCTTCTTTCGCTGTCCCCCCCTCCAC
GAATTGCTCAAATGACGAAAATATTCTTCACATCCGATGGCGCAAACGAA
TCGCCCGTTCGAGGACAAGTCACCCACACCGCCCCTGACCCATCGACGGA
CAATAAATTCTCACTGATGGCCCGCTGAGAATACACACGGCCGTTCGGCA
ATACCATGGGCGGGTTCCCTCCATCCATTGCTTCCCCAGTGCACCGACAC
GTCAAATACGAATTCCCAAAATGCGCCAACGGCAAACCCACTGCCAGAGC
GCGGCCGGTTGGAGAGCACACAGGACAGTCTTGGTTATAGTGCCCTTCAT
CCTCCGCCACCATCCCTATCTCTTGACCATCGTCTTCCTCCTTCGCTTTA
GCCATGATTTCTCCCGGAGCCCCAACACGACACAGAGGGGTCTTGAGGGC
CGTCAAGCCCGCTTGAAGGCAGACCTCGAGCGTGGAATAGTCCTGGGTCA
TCCCATAACACCGCCGCGCCGCCGCCGCAAACGAATCCCCCAATTCACGC
AAGCGTTCCACAGCGAAAAGCCGCTGATACTCAGGCACGGTACAAGCCTC
CGGGTCGGCAAGCGCAAGGGTGGCCATGGCCTGCTGGACCTCCCAAAGCT
GCTCAATTGACAGACCGGGAGTATTCGTAGCTCCACCCGCACCACCAACG
GCAGCAGCAGCACTGTTGGCTGTCGGATCAAGATGCTCGCTCGCATATTC
TAGTGCCTGAATCCGGTGTCCCTTTCGCACCAGCTCCAAGAATTGTTGCT
TGTGCAGTTGAAATTCGAGGGGGCAATTCAATCGCCGTAACTTGGAGGCG
TGGTCCGCGCACCACGCCAACGCACCCATGCAATCCCGCTTTTCGACTAG
TTGTCGTTCCACTGCGCGACATTTAATGAAGATGTCCAGGTCGAACAACT
TGCCTACTCCTCCTGCTCCTGCTCCTTGTGTACTGGCCCCTTCTTTCTCC
AGCAGGCTTAGGCTCTCAAGGTAGCCCTGCCGCAGTAAATACTCGCCTAC
CAAACGCTCTAACTGTAATTTTCTTCTCAGCGTCAGTCCATGTCTTGAAG
GATATTGTGGGGGGACAATTGATAATGAAGGGGAAGCCTCTTCGTCTTTC
TGTGCAGTTGCCAATGTCTGGAGCTTCCGTTGGCATCGCTCGAATAAGTC
CTTCTCCTGCGCGTCCGCCGCCACCAAAGCCTCTCGCAGGTGGAGTAACC
GCACCCGCAGTGCATCTGTCGTGGAGTCGGGATTGTCCTGTTTCTTGAGG
AGTGTCACAATCTGCCCAAGCTCGCGCATCACCTAGGGTGGGTTGTATGG
GGATGAGGATCTTTCGTTGGACGGAGGACGGGCAACGGCATCCCGCCTTT
TACAAATAAATCAGCCATCTCAATTGATACCTGCTTGCGGACCCGCTGGA
AGTGGGAGCTAAGGGCTTCGCAGGAGATTCTGACAAGCGTGTATTCCAGA
TGAAACATGGTCTGGGCTGCTGATTATGGAGGTGCTCTCCAGGGTAAATA
GAACCAAGAAAGCCGATCAATTTTGCGCCGCCGGGCCAATTATGTGTGTC
CTATGACGCGAAGGAAACTGTGCGTGGGGCTGTGGGTGCTTTAGTGCAGG
ATGTGGAGCGTGGAGTATCCAAGCAACAAGTCGCGAAGACGCGAAAAGAA
GGCGGCCATCTCAGAGGCTCGCTTGCCTCCCTTGCTTTGGCTTGATTCCC
ACATAATACGCGCACACATGCTTCGCAAGCAAGACCATCGCTTACACCTC
TCCAGTCAATTTGTTCCTCCTTATTAATGGCGCGCCTTCCTTTCTTTCAC
TTACCCTTACGCGCGATACAAACCATAGGCACCAGAAATCGCGCATGCGA
AGGCATGAAATCTGAGCCGATGATGAACTAAGTTAGCAAGTGGATGTGGA
TAGACAAGCCTCCGTTGTCTACGACACACCAGATAAATGGGACGCAGCCA
GCTTCAATACAATCGGCGCGCTCGGGGCCGGGGCCGGGCCGGGGGCCGTG
GCCCTGCAGGGGGTCCCTCAGGGCGTGGGGGAGGGGGAGGAGGTCGAGTC
GCGTCTGCCAAGGCAAGTCAAAAAGGTATGAAGAAAAGACACCCACGAGT
GGCCATTTGTGCTATTTGTTTGGGTTTGTCAGAAAACCCATTGTACATCT
CCTCAGTGAAGTAAAGACAGGGAAGAGAGTAGTTTAAGTCAGGAAAGAGC
ATCGACATACAAACAGTAGTCTTTTCGGAACGTGGACAGATAATAATCCC
AAACCTTAAGTATTGACACGTCGTTTCCATCGTTATTCTTTGTAAATTAG
CGGCTCTGCGGCAGCTTCCGTCGAATCAAGATCGTTTCCGACAAGGCGAC
GGTGGTGGGAGCCTCGGTGGAGAAGGGAGACTTTTGTCGGATAGTGAAGG
CGGAGATGACTTAAGGGTTTATGCATGGGGGTGAGTGACACCAAAAAAGT
CCGATGTGTGATGATGTGATGCATTGTACATTTATCGGTTTTCATCTTCT
GGTTTTCCCCTCCTTGAATTGCACAAGCCTCACGCTTTAACCTGTAGTGG
TAGTTGAAACATCGCACCGCCGTTTGATTCTCTCTCTTATCTATCCGACT
GTAGCACGGATTCGCAATTTGGTCATCACCACGTCCTGGCCGAGGAGGCT
GCTGACGAGGAGGCACCAGCGGACCTGCCTTCCTTGGGCCTGGATGTAAG
GGCACTAGCGGAAGGGCTGATATGCTTGCCTGCGCATGTCCGCCTCGGGG
GTGTGGACCCGGCCTTGACGGTAGGAAGGGTTGGGCAGGGAAGAAGAGAG
CAGTCGGCACGAACCCGCAATCCATCCGTCCTTTTTATGTTTGCTTTTGC
CATTATTATTTGCTCTTGTTCTTTTTCCTTGTGTCGAAACAGGAGGGGTT
GATGTTCCGGCAGGGATACCCGCCACCGAACGAGGGCCAAACCCCAGCAC
CACCACCCAAGCTATTAGCTGAGCTCGTCGGCAGTCTGACAAGCGCAAAC
ACGGACAAGCACTTCGTGACCGACACCACAATATCCACCGCTCCGCCTTT
GCCCTCCTTGGAGCCACCGCTCGAGGCGCTTTTGGGTCTCGAGCTGTCGT
CGTCCACTATCGAAGAGGAAAAGAAAACGGGGGGGGCAGTAAAGGCAGCT
GCAACGCCCTCATCTAGTTCATCTGCGCTTCTTACATCCGATCTGGACGA
TCTCTTAAACATAAGCTTAAAATCACGGAAAAGCGTTGGAGATGGGATTA
GTGGTGGTGACGGAAAAAAGGCGCCCAGCAACGAGGAAGAAGTCGACGGT
CCAATTTCCTCTGCTGCTTTTTCAAGCAAGGCAAAGAAGTTGTCCGCGCT
GGATGCGGGCGATTATTAAAAGATAAAAGAAATAATCACAGAATGCATCA
AAAACTCCATGTT back to topprotein sequence of NO01G02660.2 >NO01G02660.2-protein ID=NO01G02660.2-protein|Name=NO01G02660.2|organism=Nannochloropsis oceanica|type=polypeptide|length=216bp
MLACACPPRGCGPGLDGRKGWAGKKRAVGTNPQSIRPFYVCFCHYYLLLF
FFLVSKQEGLMFRQGYPPPNEGQTPAPPPKLLAELVGSLTSANTDKHFVT
DTTISTAPPLPSLEPPLEALLGLELSSSTIEEEKKTGGAVKAAATPSSSS
SALLTSDLDDLLNISLKSRKSVGDGISGGDGKKAPSNEEEVDGPISSAAF
SSKAKKLSALDAGDY* back to topmRNA from alignment at chr1:684878..688553+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO01G02660.2 ID=NO01G02660.2|Name=NO01G02660.2|organism=Nannochloropsis oceanica|type=mRNA|length=3676bp|location=Sequence derived from alignment at chr1:684878..688553+ (Nannochloropsis oceanica)
TATTTTTCTTTTTGTCATCGACTCACACGTGTTATTACAGCTGACAGATA
CAAAGTTGCCGAGTGATCCCCCTCACTCTTATCCCCTGTGATCCCGTTTC
TAACTCTTCTATACATTTTTGCGTGCTTCTTTCGCTGTCCCCCCCTCCAC
GAATTGCTCAAATGACGAAAATATTCTTCACATCCGATGGCGCAAACGAA
TCGCCCGTTCGAGGACAAGTCACCCACACCGCCCCTGACCCATCGACGGA
CAATAAATTCTCACTGATGGCCCGCTGAGAATACACACGGCCGTTCGGCA
ATACCATGGGCGGGTTCCCTCCATCCATTGCTTCCCCAGTGCACCGACAC
GTCAAATACGAATTCCCAAAATGCGCCAACGGCAAACCCACTGCCAGAGC
GCGGCCGGTTGGAGAGCACACAGGACAGTCTTGGTTATAGTGCCCTTCAT
CCTCCGCCACCATCCCTATCTCTTGACCATCGTCTTCCTCCTTCGCTTTA
GCCATGATTTCTCCCGGAGCCCCAACACGACACAGAGGGGTCTTGAGGGC
CGTCAAGCCCGCTTGAAGGCAGACCTCGAGCGTGGAATAGTCCTGGGTCA
TCCCATAACACCGCCGCGCCGCCGCCGCAAACGAATCCCCCAATTCACGC
AAGCGTTCCACAGCGAAAAGCCGCTGATACTCAGGCACGGTACAAGCCTC
CGGGTCGGCAAGCGCAAGGGTGGCCATGGCCTGCTGGACCTCCCAAAGCT
GCTCAATTGACAGACCGGGAGTATTCGTAGCTCCACCCGCACCACCAACG
GCAGCAGCAGCACTGTTGGCTGTCGGATCAAGATGCTCGCTCGCATATTC
TAGTGCCTGAATCCGGTGTCCCTTTCGCACCAGCTCCAAGAATTGTTGCT
TGTGCAGTTGAAATTCGAGGGGGCAATTCAATCGCCGTAACTTGGAGGCG
TGGTCCGCGCACCACGCCAACGCACCCATGCAATCCCGCTTTTCGACTAG
TTGTCGTTCCACTGCGCGACATTTAATGAAGATGTCCAGGTCGAACAACT
TGCCTACTCCTCCTGCTCCTGCTCCTTGTGTACTGGCCCCTTCTTTCTCC
AGCAGGCTTAGGCTCTCAAGGTAGCCCTGCCGCAGTAAATACTCGCCTAC
CAAACGCTCTAACTGTAATTTTCTTCTCAGCGTCAGTCCATGTCTTGAAG
GATATTGTGGGGGGACAATTGATAATGAAGGGGAAGCCTCTTCGTCTTTC
TGTGCAGTTGCCAATGTCTGGAGCTTCCGTTGGCATCGCTCGAATAAGTC
CTTCTCCTGCGCGTCCGCCGCCACCAAAGCCTCTCGCAGGTGGAGTAACC
GCACCCGCAGTGCATCTGTCGTGGAGTCGGGATTGTCCTGTTTCTTGAGG
AGTGTCACAATCTGCCCAAGCTCGCGCATCACCTAGGGTGGGTTGTATGG
GGATGAGGATCTTTCGTTGGACGGAGGACGGGCAACGGCATCCCGCCTTT
TACAAATAAATCAGCCATCTCAATTGATACCTGCTTGCGGACCCGCTGGA
AGTGGGAGCTAAGGGCTTCGCAGGAGATTCTGACAAGCGTGTATTCCAGA
TGAAACATGGTCTGGGCTGCTGATTATGGAGGTGCTCTCCAGGGTAAATA
GAACCAAGAAAGCCGATCAATTTTGCGCCGCCGGGCCAATTATGTGTGTC
CTATGACGCGAAGGAAACTGTGCGTGGGGCTGTGGGTGCTTTAGTGCAGG
ATGTGGAGCGTGGAGTATCCAAGCAACAAGTCGCGAAGACGCGAAAAGAA
GGCGGCCATCTCAGAGGCTCGCTTGCCTCCCTTGCTTTGGCTTGATTCCC
ACATAATACGCGCACACATGCTTCGCAAGCAAGACCATCGCTTACACCTC
TCCAGTCAATTTGTTCCTCCTTATTAATGGCGCGCCTTCCTTTCTTTCAC
TTACCCTTACGCGCGATACAAACCATAGGCACCAGAAATCGCGCATGCGA
AGGCATGAAATCTGAGCCGATGATGAACTAAGTTAGCAAGTGGATGTGGA
TAGACAAGCCTCCGTTGTCTACGACACACCAGATAAATGGGACGCAGCCA
GCTTCAATACAATCGGCGCGCTCGGGGCCGGGGCCGGGCCGGGGGCCGTG
GCCCTGCAGGGGGTCCCTCAGGGCGTGGGGGAGGGGGAGGAGGTCGAGTC
GCGTCTGCCAAGGCAAGTCAAAAAGGTATGAAGAAAAGACACCCACGAGT
GGCCATTTGTGCTATTTGTTTGGGTTTGTCAGAAAACCCATTGTACATCT
CCTCAGTGAAGTAAAGACAGGGAAGAGAGTAGTTTAAGTCAGGAAAGAGC
ATCGACATACAAACAGTAGTCTTTTCGGAACGTGGACAGATAATAATCCC
AAACCTTAAGTATTGACACGTCGTTTCCATCGTTATTCTTTGTAAATTAG
CGGCTCTGCGGCAGCTTCCGTCGAATCAAGATCGTTTCCGACAAGGCGAC
GGTGGTGGGAGCCTCGGTGGAGAAGGGAGACTTTTGTCGGATAGTGAAGG
CGGAGATGACTTAAGGGTTTATGCATGGGGGTGAGTGACACCAAAAAAGT
CCGATGTGTGATGATGTGATGCATTGTACATTTATCGGTTTTCATCTTCT
GGTTTTCCCCTCCTTGAATTGCACAAGCCTCACGCTTTAACCTGTAGTGG
TAGTTGAAACATCGCACCGCCGTTTGATTCTCTCTCTTATCTATCCGACT
GTAGCACGGATTCGCAATTTGGTCATCACCACGTCCTGGCCGAGGAGGCT
GCTGACGAGGAGGCACCAGCGGACCTGCCTTCCTTGGGCCTGGTAAGAAA
TAACATGTACATAAACTTGTTTGATTGCTTTTGCGTTTACTTCGACTGTC
AACACCCGTACAGCTTTTTTACAGCATCTTCATTTGTACTTTTCCCATCA
CTTAGGATGTAAGGGCACTAGCGGAAGGGCTGATATGCTTGCCTGCGCAT
GTCCGCCTCGGGGGTGTGGACCCGGCCTTGACGGTAGGAAGGGTTGGGCA
GGGAAGAAGAGAGCAGTCGGCACGAACCCGCAATCCATCCGTCCTTTTTA
TGTTTGCTTTTGCCATTATTATTTGCTCTTGTTCTTTTTCCTTGTGTCGA
AACAGGAGGGGTTGATGTTCCGGCAGGGATACCCGCCACCGAACGAGGGC
CAAACCCCAGCACCACCACCCAAGCTATTAGCTGAGCTCGTCGGCAGTCT
GACAAGCGCAAACACGGACAAGCACTTCGTGACCGACACCACAATATCCA
CCGCTCCGCCTTTGCCCTCCTTGGAGCCACCGCTCGAGGCGCTTTTGGGT
CTCGAGCTGTCGTCGTCCACTATCGAAGAGGAAAAGAAAACGGGGGGGGC
AGTAAAGGCAGCTGCAACGCCCTCATCTAGTTCATCTGCGCTTCTTACAT
CCGATCTGGACGATCTCTTAAACATAAGCTTAAAATCACGGAAAAGCGTT
GGAGATGGGATTAGTGGTGGTGACGGAAAAAAGGCGCCCAGCAACGAGGA
AGAAGTCGACGGTCCAATTTCCTCTGCTGCTTTTTCAAGCAAGGCAAAGA
AGTTGTCCGCGCTGGATGCGGGCGATTATTAAAAGATAAAAGAAATAATC
ACAGAATGCATCAAAAACTCCATGTT back to topCoding sequence (CDS) from alignment at chr1:684878..688553+ >NO01G02660.2 ID=NO01G02660.2|Name=NO01G02660.2|organism=Nannochloropsis oceanica|type=CDS|length=648bp|location=Sequence derived from alignment at chr1:684878..688553+ (Nannochloropsis oceanica)
ATGCTTGCCTGCGCATGTCCGCCTCGGGGGTGTGGACCCGGCCTTGACGG
TAGGAAGGGTTGGGCAGGGAAGAAGAGAGCAGTCGGCACGAACCCGCAAT
CCATCCGTCCTTTTTATGTTTGCTTTTGCCATTATTATTTGCTCTTGTTC
TTTTTCCTTGTGTCGAAACAGGAGGGGTTGATGTTCCGGCAGGGATACCC
GCCACCGAACGAGGGCCAAACCCCAGCACCACCACCCAAGCTATTAGCTG
AGCTCGTCGGCAGTCTGACAAGCGCAAACACGGACAAGCACTTCGTGACC
GACACCACAATATCCACCGCTCCGCCTTTGCCCTCCTTGGAGCCACCGCT
CGAGGCGCTTTTGGGTCTCGAGCTGTCGTCGTCCACTATCGAAGAGGAAA
AGAAAACGGGGGGGGCAGTAAAGGCAGCTGCAACGCCCTCATCTAGTTCA
TCTGCGCTTCTTACATCCGATCTGGACGATCTCTTAAACATAAGCTTAAA
ATCACGGAAAAGCGTTGGAGATGGGATTAGTGGTGGTGACGGAAAAAAGG
CGCCCAGCAACGAGGAAGAAGTCGACGGTCCAATTTCCTCTGCTGCTTTT
TCAAGCAAGGCAAAGAAGTTGTCCGCGCTGGATGCGGGCGATTATTAA back to top
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