NO01G02630.1, NO01G02630.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO01G02630.1
Unique NameNO01G02630.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length4999
Alignment locationchr1:679670..684872 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:679670..684872 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO01G02630.1 vs.
Match: EWM27954.1 (glycosyl group 1 [Nannochloropsis gaditana])

HSP 1 Score: 648.7 bits (1672), Expect = 1.900e-182
Identity = 310/421 (73.63%), Postives = 367/421 (87.17%), Query Frame = 0
Query:  105 RVVIFTAAYYVCDGVSLTIRKLRAHLRSKGIATRVVSCGPEGWSEPDVFTVPAIPLPIVNADDNFGYSLGVKLTEEVKAQIKQFEPSLIHFTVPDFLALDALRWAKAEGIPVMGTWHSNYSDYLKFYHLNVMKGVVEKYIRSFYVNMPIYVPTPFIRTKLLGNGFPKHRVGIWGRGVNLNLFAPSNRSLVFRRAKGIADDEVVILWVGRLVKEKSPDIWAEVIRRLEREGLKFRALVVGTGSYEEEMKKLPRTECLGWLSGPALAEVYASVDVFLFPSEVETFGNVTLEALASGVPCIASAGCSGHLVYHGINGFVVHQADADGYHSLTRRLLLDGGLRQRLASKARPSILTLEHSRVLDMMEENYDHVIKEHHSQGLGDPNQRK--TRDRYMTFIYHFFRVVLIILTPTLKAYVAVLKAL 524
            RVVIFTAAYYVCDGVSLTIRKLRAHL+S+GIA+RVVSCGP GWSE DVFTVP+IPLPI+NADDNFGYSLG++LT E KAQIK F PS+IHFTVPDFLALDALRWAKAE IPVMGTWHSNY+DYL+FYHL+V++  VE++IRSFYVNMPIYVPTPF+R +L+ +GFP++RV +WGRGV+L +F P+ RS+ FRR +GIADDEVVILWVGRLVKEKSPDIWAEVIRRL++EGLKFRALVVG+GSYEE MK+LPRTE LGW+SG ALAEVYASVD+FLFPSEVETFGNVTLEALASGVPCIASAGCSGHLV+HG+NGFV+ +AD D YHSLTR L+++G LR R A KAR SI++LEH RV+DMM  NY+ V++ +H  G    N R+    D Y+  +YHFF  ++++ TP +KAYVA+ + L
Sbjct:   83 RVVIFTAAYYVCDGVSLTIRKLRAHLQSRGIASRVVSCGPAGWSETDVFTVPSIPLPIINADDNFGYSLGIRLTPECKAQIKAFNPSVIHFTVPDFLALDALRWAKAERIPVMGTWHSNYADYLQFYHLSVIRLPVERFIRSFYVNMPIYVPTPFVRKRLVDSGFPENRVSLWGRGVDLKMFNPNFRSMAFRRGRGIADDEVVILWVGRLVKEKSPDIWAEVIRRLDQEGLKFRALVVGSGSYEEHMKQLPRTEHLGWMSGAALAEVYASVDLFLFPSEVETFGNVTLEALASGVPCIASAGCSGHLVHHGVNGFVISRADVDEYHSLTRELVVNGPLRARFAEKARGSIVSLEHDRVMDMMVANYEGVVQAYHRPGGEGCNSRRGGWGDVYIMLVYHFFSFLMMLGTPLMKAYVAIARIL 503          
The following BLAST results are available for this feature:
BLAST of NO01G02630.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM27954.11.900e-18273.63glycosyl group 1 [Nannochloropsis gaditana][more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G02630NO01G02630Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO01G02630.1NO01G02630.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO01G02630.1.cds1NO01G02630.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G02630.1.cds2NO01G02630.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G02630.1.cds3NO01G02630.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO01G02630.1 ID=NO01G02630.1|Name=NO01G02630.1|organism=Nannochloropsis oceanica|type=mRNA|length=4999bp
TGTGCACGCGTACTCTGCTTGTTTACTTTCATCATACAGAGGAATAATAA
TGTACACAGACATAAACTCTCATCTCAATTACCCTGATGTACAAAAATAT
CCCAAGATTTTTCGTGTCTGAGAATCCCTCGATTTGCACCCATTGACTTT
CCTCCGTCCCCAGACACTATGTTTTTTGGGGGCTGAACGGCATGGACATG
AGATAACGACAACGCCACGAAAAGCATGTATGTCATGATATTACTTTTTG
CTTTACAGCTTGGCCAGCGGTACCACATCCTTGATGGCACTGCGATAACG
GGAATCATTCGAAAGCTCACCGCGCAAGTCGACACTAAGCAGGCTCTTCA
CCTTATCGATGTCCCCGCCCGTCCGAGAAAAGAGATAAGAAATCTTCGTG
ACGCAGGCCTCGACTGTCATGTCATGGCCTGATGGAGGAAGGGAAGGGAG
GAACTACTGAGTACGGTAGAAGACAATTAGAGAAGCATATAGCTTAAGTC
CCTTCCTCCTTCCCCTCAATCCCAACGTACCACTGACAACCCCAGCGGCG
CACAAAGCCACCCCCACACTGTACTTGTCAAGCAAGACTCCACCTTGGAA
GCATTGAGTTAGGACGACCACAAGTATACCCTTTTGCGCGGCAAGCGTAA
CAGCCTCCAGCAAACCCGAGCGACTGGATGTGTCGCCGTTGCCCGTACCT
AGGGCAACGAATCGGAGGAGGGTGAGACGGACGGCGCAAGGAGCTCGAGC
GAACAGGAGGTGGAAAAAACAAATTACTATACTTATGACGGCTCGTCCTC
CAATTCAAACGTCATATGGCTTAAAACTTTCTTTCCTGCGTACCGTATAA
AAGCAGAATAATCCCATGCAAGTGCCGGCTGTGGTTGATCATGGCAAATA
ACGCGTCGTCCTCAAAGCCCGGCACGAGCCGCACAACGACCAAATTGGCA
TCCATATCTTTGTGTACCCGCAATGGCTTGCGCGGTGGTGGAAGCGAAAT
ATTTGATGCAAACTCCAAGTTGACGCCGAGGGTGGCCAAGGGGGGAAAGT
TGGGCGAGGCAAAGGCTTGCAAGTCAAAAGAGTGAACCTTGGTGGTCCGA
CAGCCCCGTAACAGCCGGGAACCGAAAACAATGCACACTTCCTGAAAATC
TTGTCGGCATGCAAAGAGCAGCGAGCTCACAAGATTGTTTCGCGCGTCTG
AGTACACCTCAGCCAGCGGAATTTGACTCCCGGTGAACACGACTGGCTTT
CCAAGGTTCTCAAACATGAAGGCCAATGCACTCGCCGAGTAGGCAAGTGT
GTCTGTACCGTGCACGACTACGAAGCCTTCGTACCGAAAATAGGCACTCT
CAATTTCCTCCGCAATCTTGATCCAATGCTCCGGCCCCATACAGGCACTA
TCGGTGAGGTGATCCCATTCCAAAACGTCTATATCGGGTAGATTCTCATG
CCGCCATTCCGGCAAAGCCAAGAGCTCCGAGAGAAATCCCGGGCAAACAT
CCAATGTACCTCCTGTGCCGCTGGGCTTCATGATTAGCGTCCCGCCTGTT
ACGATGACCAGGACTTTTTTGGCTTTTTTGCCCTCCCCAATTTGCGTGAG
CATTCTTGGACTGTCCTGAGTAAGGGCGACCAGTGTTGTTTTAGCAGCAG
GTGTAGGGTGGGGCATGCGTTAAAGACCCGCTTGGCTTAACGTGCCAGCA
GGATTAAATGGCCTTATGTGTACTATCTACACTATTATGTTTGTTTTGAA
GAAAGGCTTGAGAGTTTGACGTGCGTGCAGAATCTGCACTGCAGATACTG
AATAGAGAAGCCTGCCATGATTTTGGCGCGAGATGCACACGAAGCCCCTA
GTGAAGCCCTTGCCTTTTTTGCCTGCAGCAAGCCCGACCCAACCAAGCTC
GTTACCACGCTCTGTAAGCGTTGTGAACAAGTGGTATCAGGGCAACGGTT
GGCGATGATGGAGTCAGCGAGCGCGAAGGCCGCGAATTTGAGATGTCATC
ATGATCGTTCCGTGCACGACGCGGGTAATTCAAAATCGTCGGGTACGAGG
GAAAATAGCACTGCTCTCGGGACGACAAGCTTTGAGGTTTTAATGCAGAG
ATACACGAAATTCCCCCAAGAGCCCTCCACAACGCAGGCAATGCACCCAG
GCAACTTTTCCATATCTGAACTGGTAACGCCTTTCCGTCCGGACACACCC
TGCAGACGAGCGACGTAGCTCTTGCCTTACTTGCCCTGTCCAGAGCAGAT
GCACAATATTCTATTCATACTGGAGATGCACGCCATCACATCCCACATAC
CATACCATTCAATAACACAGGGGTAAATAGCAAGCTCCGAGGAAGAGAGT
CGCTAGAGCGGGACCATGGCCAAAGCGAGATAATCAACACACGGCGCGTC
CACATTTGGCCTCTTCTTTTTCACCATCCCACTCACCAGCACCCGCCCAA
GCAACGACATCACCCAGCACGCATTCATACATTAGATTTCCTCCCACGCG
CACGCTATGACGTGCCGCAGTAGCCTTCGCGAGGATCTCCCCGCATCCTC
CTACCCATTGCCGCCCCCGGCTGCCGCCTTTTGTCCGCCTGTGATACCAG
ACTTCAGCAGCAACGTCCTCCATTCCTCACAAAGCAGCCTGAGCAGCAGC
AGTAAAATGGTCATAGTCCCACCAGCCGCTGCTGTCCCATTTTCCACCCC
ACATATGGCCCTGGAAGTGGCGGCGGGCCTCCCCATGCGAAAACAAAGTG
GCGCCAGCCAGTACCACCAGTTTTCCAAGGATCCCGAGATGGGCAACGTC
GCATTTCAACCGTGCGAACGCGTGGTCATTTTCACTGCTGCCTACTACGT
GTGCGACGGCGTCAGCTTGACAATCCGCAAGCTCCGTGCCCACCTCCGCT
CCAAGGGCATCGCCACCCGCGTTGTCTCGTGCGGGCCCGAGGGCTGGAGC
GAGCCCGACGTCTTCACCGTGCCTGCAATCCCGCTTCCCATCGTCAACGC
GGACGACAACTTCGGTTACTCCTTAGGGGTCAAGCTGACGGAGGAAGTGA
AAGCCCAAATCAAGCAATTCGAGCCGAGTCTGATCCATTTTACGGTGCCG
GATTTCTTGGCGCTGGACGCCCTGCGGTGGGCGAAGGCGGAGGGGATCCC
AGTGATGGGGACGTGGCACAGTAATTACTCCGATTATTTGAAATTCTACC
ATCTGAATGTCATGAAAGGCGTGGTTGAGAAGTATATAAGGAGTTTTTAT
GTGAACATGCCTATATATGTCCCCACCCCTTTTATTCGTACGAAGCTTTT
GGGTAATGGCTTTCCGAAGCACCGGGTGGGGATATGGGGGAGAGGGGTAA
ATTTAAATCTGTTCGCGCCGTCGAATCGCTCGTTAGTTTTTAGACGGGCC
AAGGGCATTGCGGATGATGAAGTAGTGATTCTGTGGGTGGGGCGGCTGGT
AAAGGAAAAGAGTCCTGATATATGGGCGGAGGTGATTAGGAGGCTTGAGA
GGGAGGGATTAAAGTTTCGGGCACTGGTGGTGGGGACGGGTAGCTATGAA
GAAGAGATGAAGAAGTTGCCGAGGACGGAGTGCTTGGGGTGGTTGAGTGG
GCCGGCGTTGGCGGAGGTTTATGCGAGCGTGGACGTCTTCTTGTTCCCGA
GCGAGGTTGAGACGTTTGGGAATGTCACCTTGGAGGCATTAGCAAGTGGA
GTGCCTTGTATTGCGTCGGCGGGCTGTTCGGGGCATCTGGTTTATCATGG
GATTAATGGTTTTGTGGTCCACCAGGCGGACGCGGATGGTTATCATTCGT
TGACTCGGAGGTTGTTGCTCGACGGGGGGTTGAGGCAGCGGTTAGCGAGC
AAAGCGAGACCGAGTATTCTAACTTTGGAGCACAGTCGAGTATTGGACAT
GATGGAGGAGAACTACGATCATGTTATCAAGGAGCATCACTCCCAGGGAT
TGGGGGACCCGAATCAACGCAAAACTCGGGATAGGTACATGACTTTCATT
TACCATTTCTTCCGTGTCGTTCTAATCATTTTAACTCCTACTCTGAAGGC
ATATGTAGCCGTGCTCAAAGCGCTGCAGCGGGCGTGGGCTGGCTATGAGC
AGCGGGTCCAACAAAAAAGGGACGAGGGAGAGAAGGTGAGAGAAGGGAGT
GAGGAAGACGACAGCGAGAGCGGCTCGGGGGAGAGAGGAGGAGGAGAGAA
GACTGAAGCGAGCAGCGGAAAGCTCTTGCAGAGCATGGCCTCGCTTGTGG
TCACGGTGGCTGTCCCGGTATCTAACGTGTTCTCTTCCTTGACTTTCCGG
GAAATGCGGGCGTTGATGATAATTGTGTATGTATTTGCGCTGTATGTGTT
GTGGCAGACTTTGCATTCGGCCATCCTATCATAAATGGTGATAAAGAAGA
AGGGATAACGGATGCCCAAGAAATTAAAGTCGACAACCGGTAGAGTAAGG
ATTATTAGAGTCGCATACGCTTAGGGTTTTTTGATCTCCACATAAAGCTC
CCATCCTTTTTCTCGTAGGGCACTGACTGATCATCTGTAGTGTATTTCTC
ATATTTTCATATCCAAACGTTTAGAGAGCAAGAAGCCAGGAAAATGAGAT
ACGCCGGCGAACCACGAAATATTAAAAAATGACTTTTAACAAGAGAAAGC
TAGAGAAGCAGGGCCCGGAACAGCGGGAGACGTTGGGGGCTCAGGCCAAG
ACGGAAAGTCGTGGAGCCCCTTTTAGAAACTAACCCAGGTTTACTTCATC
ATGTTGAACGTAGTAAGGCGTTCTGTGTATATGTACCACCATTTCTCCAC
CCTCCTTTCTTTGTCACCGACGGATATTGTCAAAGTAACCGAGGAATTTT
CACTCGAGATGTTTTGCAGATATATGTCCTCCCGTACCCTTCCTTCATTT
TCAATCAACAGCAGACAGGAATAATAACAAAAGCAAAAGATAAGACAATT
TTGGATAAGCCAGAGCACAGACTTTTGAAAAGCTGCATTCACTCCATTT
back to top

protein sequence of NO01G02630.1

>NO01G02630.1-protein ID=NO01G02630.1-protein|Name=NO01G02630.1|organism=Nannochloropsis oceanica|type=polypeptide|length=626bp
MTCRSSLREDLPASSYPLPPPAAAFCPPVIPDFSSNVLHSSQSSLSSSSK
MVIVPPAAAVPFSTPHMALEVAAGLPMRKQSGASQYHQFSKDPEMGNVAF
QPCERVVIFTAAYYVCDGVSLTIRKLRAHLRSKGIATRVVSCGPEGWSEP
DVFTVPAIPLPIVNADDNFGYSLGVKLTEEVKAQIKQFEPSLIHFTVPDF
LALDALRWAKAEGIPVMGTWHSNYSDYLKFYHLNVMKGVVEKYIRSFYVN
MPIYVPTPFIRTKLLGNGFPKHRVGIWGRGVNLNLFAPSNRSLVFRRAKG
IADDEVVILWVGRLVKEKSPDIWAEVIRRLEREGLKFRALVVGTGSYEEE
MKKLPRTECLGWLSGPALAEVYASVDVFLFPSEVETFGNVTLEALASGVP
CIASAGCSGHLVYHGINGFVVHQADADGYHSLTRRLLLDGGLRQRLASKA
RPSILTLEHSRVLDMMEENYDHVIKEHHSQGLGDPNQRKTRDRYMTFIYH
FFRVVLIILTPTLKAYVAVLKALQRAWAGYEQRVQQKRDEGEKVREGSEE
DDSESGSGERGGGEKTEASSGKLLQSMASLVVTVAVPVSNVFSSLTFREM
RALMIIVYVFALYVLWQTLHSAILS*
back to top

mRNA from alignment at chr1:679670..684872-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO01G02630.1 ID=NO01G02630.1|Name=NO01G02630.1|organism=Nannochloropsis oceanica|type=mRNA|length=5203bp|location=Sequence derived from alignment at chr1:679670..684872- (Nannochloropsis oceanica)
TGTGCACGCGTACTCTGCTTGTTTACTTTCATCATACAGAGGAATAATAA TGTACACAGACATAAACTCTCATCTCAATTACCCTGATGTACAAAAATAT CCCAAGATTTTTCGTGTCTGAGAATCCCTCGATTTGCACCCATTGACTTT CCTCCGTCCCCAGACACTATGTTTTTTGGGGGCTGAACGGCATGGACATG AGATAACGACAACGCCACGAAAAGCATGTATGTCATGATATTACTTTTTG CTTTACAGCTTGGCCAGCGGTACCACATCCTTGATGGCACTGCGATAACG GGAATCATTCGAAAGCTCACCGCGCAAGTCGACACTAAGCAGGCTCTTCA CCTTATCGATGTCCCCGCCCGTCCGAGAAAAGAGATAAGAAATCTTCGTG ACGCAGGCCTCGACTGTCATGTCATGGCCTGATGGAGGAAGGGAAGGGAG GAACTACTGAGTACGGTAGAAGACAATTAGAGAAGCATATAGCTTAAGTC CCTTCCTCCTTCCCCTCAATCCCAACGTACCACTGACAACCCCAGCGGCG CACAAAGCCACCCCCACACTGTACTTGTCAAGCAAGACTCCACCTTGGAA GCATTGAGTTAGGACGACCACAAGTATACCCTTTTGCGCGGCAAGCGTAA CAGCCTCCAGCAAACCCGAGCGACTGGATGTGTCGCCGTTGCCCGTACCT AGGGCAACGAATCGGAGGAGGGTGAGACGGACGGCGCAAGGAGCTCGAGC GAACAGGAGGTGGAAAAAACAAATTACTATACTTATGACGGCTCGTCCTC CAATTCAAACGTCATATGGCTTAAAACTTTCTTTCCTGCGTACCGTATAA AAGCAGAATAATCCCATGCAAGTGCCGGCTGTGGTTGATCATGGCAAATA ACGCGTCGTCCTCAAAGCCCGGCACGAGCCGCACAACGACCAAATTGGCA TCCATATCTTTGTGTACCCGCAATGGCTTGCGCGGTGGTGGAAGCGAAAT ATTTGATGCAAACTCCAAGTTGACGCCGAGGGTGGCCAAGGGGGGAAAGT TGGGCGAGGCAAAGGCTTGCAAGTCAAAAGAGTGAACCTTGGTGGTCCGA CAGCCCCGTAACAGCCGGGAACCGAAAACAATGCACACTTCCTGAAAATC TTGTCGGCATGCAAAGAGCAGCGAGCTCACAAGATTGTTTCGCGCGTCTG AGTACACCTCAGCCAGCGGAATTTGACTCCCGGTGAACACGACTGGCTTT CCAAGGTTCTCAAACATGAAGGCCAATGCACTCGCCGAGTAGGCAAGTGT GTCTGTACCGTGCACGACTACGAAGCCTTCGTACCGAAAATAGGCACTCT CAATTTCCTCCGCAATCTTGATCCAATGCTCCGGCCCCATACAGGCACTA TCGGTGAGGTGATCCCATTCCAAAACGTCTATATCGGGTAGATTCTCATG CCGCCATTCCGGCAAAGCCAAGAGCTCCGAGAGAAATCCCGGGCAAACAT CCAATGTACCTCCTGTGCCGCTGGGCTTCATGATTAGCGTCCCGCCTGTT ACGATGACCAGGACTTTTTTGGCTTTTTTGCCCTCCCCAATTTGCGTGAG CATTCTTGGACTGTCCTGAGTAAGGGCGACCAGTGTTGTTTTAGCAGCAG GTGTAGGGTGGGGCATGCGTTAAAGACCCGCTTGGCTTAACGTGCCAGCA GGATTAAATGGCCTTATGTGTACTATCTACACTATTATGTTTGTTTTGAA GAAAGGCTTGAGAGTTTGACGTGCGTGCAGAATCTGCACTGCAGATACTG AATAGAGAAGCCTGCCATGATTTTGGCGCGAGATGCACACGAAGCCCCTA GTGAAGCCCTTGCCTTTTTTGCCTGCAGCAAGCCCGACCCAACCAAGCTC GTTACCACGCTCTGTAAGCGTTGTGAACAAGTGGTATCAGGGCAACGGTT GGCGATGATGGAGTCAGCGAGCGCGAAGGCCGCGAATTTGAGATGTCATC ATGATCGTTCCGTGCACGACGCGGGTAATTCAAAATCGTCGGGTACGAGG GAAAATAGCACTGCTCTCGGGACGACAAGCTTTGAGGTTTTAATGCAGAG ATACACGAAATTCCCCCAAGAGCCCTCCACAACGCAGGCAATGCACCCAG GCAACTTTTCCATATCTGAACTGGTAACGCCTTTCCGTCCGGACACACCC TGCAGACGAGCGACGTAGCTCTTGCCTTACTTGCCCTGTCCAGAGCAGAT GCACAATATTCTATTCATACTGGAGATGCACGCCATCACATCCCACATAC CATACCATTCAATAACACAGGGGTAAATAGCAAGCTCCGAGGAAGAGAGT CGCTAGAGCGGGACCATGGCCAAAGCGAGATAATCAACACACGGCGCGTC CACATTTGGCCTCTTCTTTTTCACCATCCCACTCACCAGCACCCGCCCAA GCAACGACATCACCCAGCACGCATTCATACATTAGATTTCCTCCCACGCG CACGCTATGACGTGCCGCAGTAGCCTTCGCGAGGATCTCCCCGCATCCTC CTACCCATTGCCGCCCCCGGCTGCCGCCTTTTGTCCGCCTGTGATACCAG ACTTCAGCAGCAACGTCCTCCATTCCTCACAAAGCAGCCTGAGCAGCAGC AGTAAAATGGTACGTGGTTACATGCAGCCCCGCTTCTTCCAATGTCTCAT ATATCGAACCTGCTCTTTCCTTTCAAATACTCCCTCATATAGGTCATAGT CCCACCAGCCGCTGCTGTCCCATTTTCCACCCCACATATGGCCCTGGAAG TGGCGGCGGGCCTCCCCATGCGAAAACAAAGTGGCGCCAGCCAGTACCAC CAGTTTTCCAAGGATCCCGAGATGGGCAACGTCGCATTTCAACCGTGGTA AGTAAATTTCCTTGAGGTATGGTTGCTTTCCTTTCATTTCTCGCATAGTG ACTACATCATTGCCGAATACCAATTTTTGGAATACCAATTTTTTCCTCCC TTGCTACCTTCGTTTCAGCGAACGCGTGGTCATTTTCACTGCTGCCTACT ACGTGTGCGACGGCGTCAGCTTGACAATCCGCAAGCTCCGTGCCCACCTC CGCTCCAAGGGCATCGCCACCCGCGTTGTCTCGTGCGGGCCCGAGGGCTG GAGCGAGCCCGACGTCTTCACCGTGCCTGCAATCCCGCTTCCCATCGTCA ACGCGGACGACAACTTCGGTTACTCCTTAGGGGTCAAGCTGACGGAGGAA GTGAAAGCCCAAATCAAGCAATTCGAGCCGAGTCTGATCCATTTTACGGT GCCGGATTTCTTGGCGCTGGACGCCCTGCGGTGGGCGAAGGCGGAGGGGA TCCCAGTGATGGGGACGTGGCACAGTAATTACTCCGATTATTTGAAATTC TACCATCTGAATGTCATGAAAGGCGTGGTTGAGAAGTATATAAGGAGTTT TTATGTGAACATGCCTATATATGTCCCCACCCCTTTTATTCGTACGAAGC TTTTGGGTAATGGCTTTCCGAAGCACCGGGTGGGGATATGGGGGAGAGGG GTAAATTTAAATCTGTTCGCGCCGTCGAATCGCTCGTTAGTTTTTAGACG GGCCAAGGGCATTGCGGATGATGAAGTAGTGATTCTGTGGGTGGGGCGGC TGGTAAAGGAAAAGAGTCCTGATATATGGGCGGAGGTGATTAGGAGGCTT GAGAGGGAGGGATTAAAGTTTCGGGCACTGGTGGTGGGGACGGGTAGCTA TGAAGAAGAGATGAAGAAGTTGCCGAGGACGGAGTGCTTGGGGTGGTTGA GTGGGCCGGCGTTGGCGGAGGTTTATGCGAGCGTGGACGTCTTCTTGTTC CCGAGCGAGGTTGAGACGTTTGGGAATGTCACCTTGGAGGCATTAGCAAG TGGAGTGCCTTGTATTGCGTCGGCGGGCTGTTCGGGGCATCTGGTTTATC ATGGGATTAATGGTTTTGTGGTCCACCAGGCGGACGCGGATGGTTATCAT TCGTTGACTCGGAGGTTGTTGCTCGACGGGGGGTTGAGGCAGCGGTTAGC GAGCAAAGCGAGACCGAGTATTCTAACTTTGGAGCACAGTCGAGTATTGG ACATGATGGAGGAGAACTACGATCATGTTATCAAGGAGCATCACTCCCAG GGATTGGGGGACCCGAATCAACGCAAAACTCGGGATAGGTACATGACTTT CATTTACCATTTCTTCCGTGTCGTTCTAATCATTTTAACTCCTACTCTGA AGGCATATGTAGCCGTGCTCAAAGCGCTGCAGCGGGCGTGGGCTGGCTAT GAGCAGCGGGTCCAACAAAAAAGGGACGAGGGAGAGAAGGTGAGAGAAGG GAGTGAGGAAGACGACAGCGAGAGCGGCTCGGGGGAGAGAGGAGGAGGAG AGAAGACTGAAGCGAGCAGCGGAAAGCTCTTGCAGAGCATGGCCTCGCTT GTGGTCACGGTGGCTGTCCCGGTATCTAACGTGTTCTCTTCCTTGACTTT CCGGGAAATGCGGGCGTTGATGATAATTGTGTATGTATTTGCGCTGTATG TGTTGTGGCAGACTTTGCATTCGGCCATCCTATCATAAATGGTGATAAAG AAGAAGGGATAACGGATGCCCAAGAAATTAAAGTCGACAACCGGTAGAGT AAGGATTATTAGAGTCGCATACGCTTAGGGTTTTTTGATCTCCACATAAA GCTCCCATCCTTTTTCTCGTAGGGCACTGACTGATCATCTGTAGTGTATT TCTCATATTTTCATATCCAAACGTTTAGAGAGCAAGAAGCCAGGAAAATG AGATACGCCGGCGAACCACGAAATATTAAAAAATGACTTTTAACAAGAGA AAGCTAGAGAAGCAGGGCCCGGAACAGCGGGAGACGTTGGGGGCTCAGGC CAAGACGGAAAGTCGTGGAGCCCCTTTTAGAAACTAACCCAGGTTTACTT CATCATGTTGAACGTAGTAAGGCGTTCTGTGTATATGTACCACCATTTCT CCACCCTCCTTTCTTTGTCACCGACGGATATTGTCAAAGTAACCGAGGAA TTTTCACTCGAGATGTTTTGCAGATATATGTCCTCCCGTACCCTTCCTTC ATTTTCAATCAACAGCAGACAGGAATAATAACAAAAGCAAAAGATAAGAC AATTTTGGATAAGCCAGAGCACAGACTTTTGAAAAGCTGCATTCACTCCA TTT
back to top

Coding sequence (CDS) from alignment at chr1:679670..684872-

>NO01G02630.1 ID=NO01G02630.1|Name=NO01G02630.1|organism=Nannochloropsis oceanica|type=CDS|length=1878bp|location=Sequence derived from alignment at chr1:679670..684872- (Nannochloropsis oceanica)
ATGACGTGCCGCAGTAGCCTTCGCGAGGATCTCCCCGCATCCTCCTACCC
ATTGCCGCCCCCGGCTGCCGCCTTTTGTCCGCCTGTGATACCAGACTTCA
GCAGCAACGTCCTCCATTCCTCACAAAGCAGCCTGAGCAGCAGCAGTAAA
ATGGTCATAGTCCCACCAGCCGCTGCTGTCCCATTTTCCACCCCACATAT
GGCCCTGGAAGTGGCGGCGGGCCTCCCCATGCGAAAACAAAGTGGCGCCA
GCCAGTACCACCAGTTTTCCAAGGATCCCGAGATGGGCAACGTCGCATTT
CAACCGTGCGAACGCGTGGTCATTTTCACTGCTGCCTACTACGTGTGCGA
CGGCGTCAGCTTGACAATCCGCAAGCTCCGTGCCCACCTCCGCTCCAAGG
GCATCGCCACCCGCGTTGTCTCGTGCGGGCCCGAGGGCTGGAGCGAGCCC
GACGTCTTCACCGTGCCTGCAATCCCGCTTCCCATCGTCAACGCGGACGA
CAACTTCGGTTACTCCTTAGGGGTCAAGCTGACGGAGGAAGTGAAAGCCC
AAATCAAGCAATTCGAGCCGAGTCTGATCCATTTTACGGTGCCGGATTTC
TTGGCGCTGGACGCCCTGCGGTGGGCGAAGGCGGAGGGGATCCCAGTGAT
GGGGACGTGGCACAGTAATTACTCCGATTATTTGAAATTCTACCATCTGA
ATGTCATGAAAGGCGTGGTTGAGAAGTATATAAGGAGTTTTTATGTGAAC
ATGCCTATATATGTCCCCACCCCTTTTATTCGTACGAAGCTTTTGGGTAA
TGGCTTTCCGAAGCACCGGGTGGGGATATGGGGGAGAGGGGTAAATTTAA
ATCTGTTCGCGCCGTCGAATCGCTCGTTAGTTTTTAGACGGGCCAAGGGC
ATTGCGGATGATGAAGTAGTGATTCTGTGGGTGGGGCGGCTGGTAAAGGA
AAAGAGTCCTGATATATGGGCGGAGGTGATTAGGAGGCTTGAGAGGGAGG
GATTAAAGTTTCGGGCACTGGTGGTGGGGACGGGTAGCTATGAAGAAGAG
ATGAAGAAGTTGCCGAGGACGGAGTGCTTGGGGTGGTTGAGTGGGCCGGC
GTTGGCGGAGGTTTATGCGAGCGTGGACGTCTTCTTGTTCCCGAGCGAGG
TTGAGACGTTTGGGAATGTCACCTTGGAGGCATTAGCAAGTGGAGTGCCT
TGTATTGCGTCGGCGGGCTGTTCGGGGCATCTGGTTTATCATGGGATTAA
TGGTTTTGTGGTCCACCAGGCGGACGCGGATGGTTATCATTCGTTGACTC
GGAGGTTGTTGCTCGACGGGGGGTTGAGGCAGCGGTTAGCGAGCAAAGCG
AGACCGAGTATTCTAACTTTGGAGCACAGTCGAGTATTGGACATGATGGA
GGAGAACTACGATCATGTTATCAAGGAGCATCACTCCCAGGGATTGGGGG
ACCCGAATCAACGCAAAACTCGGGATAGGTACATGACTTTCATTTACCAT
TTCTTCCGTGTCGTTCTAATCATTTTAACTCCTACTCTGAAGGCATATGT
AGCCGTGCTCAAAGCGCTGCAGCGGGCGTGGGCTGGCTATGAGCAGCGGG
TCCAACAAAAAAGGGACGAGGGAGAGAAGGTGAGAGAAGGGAGTGAGGAA
GACGACAGCGAGAGCGGCTCGGGGGAGAGAGGAGGAGGAGAGAAGACTGA
AGCGAGCAGCGGAAAGCTCTTGCAGAGCATGGCCTCGCTTGTGGTCACGG
TGGCTGTCCCGGTATCTAACGTGTTCTCTTCCTTGACTTTCCGGGAAATG
CGGGCGTTGATGATAATTGTGTATGTATTTGCGCTGTATGTGTTGTGGCA
GACTTTGCATTCGGCCATCCTATCATAA
back to top
Synonyms
Publications