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Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| chr1 | genome | chr1:589417..594695 + |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
BLAST of NO01G02270.1 vs.
Match: EWM29189.1 (Cyclic nucleotide-binding protein [Nannochloropsis gaditana]) HSP 1 Score: 1981.5 bits (5132), Expect = 0.000e+0 Identity = 1066/1455 (73.26%), Postives = 1181/1455 (81.17%), Query Frame = 0
Query: 4 MLWAAMSWGWALAKDLPYTSFSLLFSYPKTFTTIAGGFIIAALVLCQRLLEKLERLPARTSARSLPSPLLQRHSMSNSNLDEYAETGNRAYGDELLQDRKLRHRYRKLKQNWLHQGQKLFRKIRRKG--SSSADRVSRRLEDGLESIYSPMELPQPSKFAREVSSDLILDGMRLNGDSYIAFMAIMNSWKVFGGRDVPLLLKMCTGVTTLTLSAGGYLFEEGKPLERCLYILKDGELEISVQPDLGLDQLQPVHSSSGDRSTTPPLLPPDFLERIDQEGTIISGILDFVALLTESSVAEYCASARCTTDCRILQVPIIPNNGGQKTSSSISICSGSTRIRSGCTSTSSSNSNGVSSCTLDQEEEEANAPRNSASAQARCRLIRSCLIRSHRVTLATAYAYLGVIYDLYPRHPIIPIVGSALSSLSSETRLEDKQQHALKRLIRLVLALDPDHAIPDLEPCVVPVSSRCIPTSSGGSDGSYAVEPGTVADSRLLQRQERIAGSPSGLEGGEGRRGNGLCTASLPWNQPRLYLLRRGDSPHELDEQSRTSLHILVTGRLQVTKVDAMAAAPGVAGQAQGQQGLGRGSSPSGVGKSIFSDNYGAMRGPLAASMAASPTFPLSSGFKAPGAPTAADSSSAASRGEHGPGAVLGYSCLLTGAPEDWYSPRGKNRARLRLEASCDSLVVQIPLAFVEKAMKPHPLATLALAARKTLETIPKVLRVIDFGVKWKQLQAGEVLVREGQPSDGCLYVLLYGRARSSIQQRPSASASSPPLQAAS------------DAVEAAKLQQQQEIAQKENVVVVADHGRGTLIGETEILTGGIHQVTVQAVRYTSFATIPSSVLSFLIRRHPRVLAHLAEHVVEKASHNSRHH-PFYRDRTPMKMFTLPMPVPAGAADG--RRGAGSPFWASSLASSSSPGARRVVVGEQGAKTILVLPASNGVPMDYFIKTLEGAMVKARHSVRTVTSALAASVLGLDEDTYYSVAWCRDNVLLLESWLTQQEEQHEIVLYQSDWEDSEWNRMAAGMADVVLLVGNAADPPGIAHLELILDPFIRSAQKLLILLHVNPSPYYTPSGTRLWIEKRAGIQQHYHVRMHTQSPQFDQQHIRSDFARLSRILTGTAVGLVLGGGGARGMAHLGLLRVLEEEGIPIDHIVGVSIGAFIGGLYAKRSSYLEILPFASRFAQNMSSTWLFIKDFTLPFTSYFNGYSFGRELEKAFGDTKIEDCWLSFACLTVDLSVSRERVHQNGTLWRYVRASMTLAGLLPPLCDVDPKDDAVHYLVDGGYVNNLPADVMKEVFSAETIIACDIGVEVRMTGRQDYGDTLTGLQVLLHALLPTWVRGGDAETLKAPSMGDISSQLMYVRSVQQLEQAKESIDCYLRPPVTHFGIMEWKRHVELQSLGYLYCRSSVRAWREALKKEKGGRGSITAFQTVTSSAGDHMIRGRSLSA 1442
MLWAAM WGWA KDLPYTS+ LL +YP+T + IA GF + A+VL QRLLEKLE+ P+RT++RSLPSPL+QRHSM S EY E NRAYGDELLQDRKLRHRYRKLKQNWLH GQ LFRKIRR+G ++S DR SRRLEDGLESIYSPMELP PSK +R+VSS ++LDG+RLNG S++AFMAIM+SWKVFGGRDVPLLLKMCTGVTTL+L AG LFEEGKPLE CLYIL +GELEI V+ D+ + S+ G + PP P DFLERID+ GTIISGILDFVALLTES+VAE CA+A CT DCR+LQVPI+P R+RS S G+ EEE+ + PRN ASA AR RLIRSCL+RS+RVT AT YAYLGVIYDLYPR+P+ P+VGSAL+SL+ ET L +K QHALKRLIRL+LALDPD+ IPDL+ C +S PT+ G T D RL +R A SP L R G ++ LP RLY+LR G+SPHELD+QSRTSLHILVTGRLQV+K+DA ++ + QA+G S+ G+G+SIFS YGA A+M +P PL + +P A AA +++AA RGEHGPGAVLGYSCLLTGAPEDWYSPRGKNRARLRLEASCDSLVVQIPL FVE AMKP+ LATLALAARKTLETIP+VLRVIDFGVKWKQLQAGEVLVREGQ SDGCLYVLLYGRARSSIQQ SA SSP +S D +A L++ +E + ENVVVVADHGRGTLIGETEILTGG H+ TVQAVRYTSFATIPSSVLSFLIRRHPRVLAHLAEHVV+KA+ NSRHH P YR RTPM+MFTLP + A DG R+ AGSPFWASSL+SS++ RRVVVGE GAKTILVLP S VP++ F KTLE A+++ARHSVRT+TSALAASVLGLDEDTYYS AWC+DNVLLLESWLTQQEEQHEIVLYQ+DWEDSEWNRMAAGMADVVLLV NAAD P I +LE LDPFIR+AQKLLILLH+NP PY+TP+GTRLWIE R GIQQHYHVRMHTQS QFDQQHIRSDFARL RILTGTAVGLVLGGGGARGMAHLGLLRVLEEEGIPIDHIVGVSIGAFIGGLYAK SSYLEILPFASRFAQNMSSTWLFIKDFTLPFTSYFNGYSFGRELEKAFGDTKIEDCWLSFACLTVDLSVSRERVHQNGTLWRYVR SMTLAGLLPPLCDVDPKDDAVHYLVDGGYVNNLPADVMKEVFSAET IACDIGV+V MTGRQDYGDTLTGLQVLLH + P W RGG A TLKAPSMG+ISSQLMYV SVQQLE+AKE+IDCYLRPPVTHFGIM+WKRH ELQSLGYLYCR S+RAWREALKKEK GRG+ +AF+ VT +AGDH+IRGRSLSA
Sbjct: 1 MLWAAMCWGWAFVKDLPYTSWRLLCTYPRTISVIAVGFTVIAVVLGQRLLEKLEQPPSRTTSRSLPSPLIQRHSMGGSG-SEYDEVANRAYGDELLQDRKLRHRYRKLKQNWLHHGQNLFRKIRRRGRGATSRDRWSRRLEDGLESIYSPMELPVPSKLSRDVSSGIVLDGVRLNGASHLAFMAIMDSWKVFGGRDVPLLLKMCTGVTTLSLQAGDCLFEEGKPLEPCLYILDEGELEILVRSDVTAQEA----SARGHKREAPPPPPTDFLERIDKRGTIISGILDFVALLTESAVAESCATALCTKDCRVLQVPIVP-------------VGSEARLRSPSLS-------GI-------EEEDRDTPRNPASAHARSRLIRSCLVRSYRVTFATVYAYLGVIYDLYPRYPVFPVVGSALTSLTPETSLGEKHQHALKRLIRLILALDPDYEIPDLDRCSAFFASS--PTAGGNGTAPGGPVGATGTDPRLYRRASG-AASPRTLRDNGSR---GPSSSHLP----RLYVLREGESPHELDDQSRTSLHILVTGRLQVSKLDARLSSVD-SSQARGFDQ----STSLGIGRSIFSSQYGA------AAMGTAP--PLVNPLGSPDAGAAA-AAAAAVRGEHGPGAVLGYSCLLTGAPEDWYSPRGKNRARLRLEASCDSLVVQIPLTFVEHAMKPNMLATLALAARKTLETIPRVLRVIDFGVKWKQLQAGEVLVREGQSSDGCLYVLLYGRARSSIQQNVSAP-SSPSHNRSSEGRGLESPHKGGDLDLSASLREHRE--ENENVVVVADHGRGTLIGETEILTGGAHKTTVQAVRYTSFATIPSSVLSFLIRRHPRVLAHLAEHVVDKAAFNSRHHLPLYRGRTPMRMFTLPT---SSADDGERRKSAGSPFWASSLSSSTT--GRRVVVGEPGAKTILVLPISTHVPIERFSKTLEAALLRARHSVRTITSALAASVLGLDEDTYYSGAWCQDNVLLLESWLTQQEEQHEIVLYQADWEDSEWNRMAAGMADVVLLVANAADQPAIVYLEQKLDPFIRNAQKLLILLHINPGPYHTPTGTRLWIESRVGIQQHYHVRMHTQSVQFDQQHIRSDFARLGRILTGTAVGLVLGGGGARGMAHLGLLRVLEEEGIPIDHIVGVSIGAFIGGLYAKHSSYLEILPFASRFAQNMSSTWLFIKDFTLPFTSYFNGYSFGRELEKAFGDTKIEDCWLSFACLTVDLSVSRERVHQNGTLWRYVRGSMTLAGLLPPLCDVDPKDDAVHYLVDGGYVNNLPADVMKEVFSAETTIACDIGVDVTMTGRQDYGDTLTGLQVLLHGMSPAWARGGMAGTLKAPSMGEISSQLMYVHSVQQLERAKETIDCYLRPPVTHFGIMDWKRHAELQSLGYLYCRDSIRAWREALKKEKDGRGASSAFRVVTGAAGDHLIRGRSLSA 1391
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO01G02270.1 ID=NO01G02270.1|Name=NO01G02270.1|organism=Nannochloropsis oceanica|type=mRNA|length=5049bp
TGATGAGCATGCATGCGTTTCACCTCTTCACTTCCAGGTCTTGCACAAGA
GTCATCGGCCCGTTCATGCGATGGCTGCGATCAGTAGATACGATCATCCT
TTTTGGAGAGCGCCGTTGTATGGATGAGTGGTTGCAGCGCCGGCTGTCGA
TCGACGAGAAAACGAGAAAGAGAGGAAAACCACGATCTCACTGCCTCCTC
TCTCTTACACAGGTAGAAAGAAGGGACAGGGGCGTCTCCTTGCAGCCGGA
GCCCACGCACAATGCTAGCCATGTTGTGGGCCGCCATGAGCTGGGGCTGG
GCTCTGGCCAAGGACCTGCCCTATACCTCTTTTTCCCTTCTTTTCAGCTA
CCCCAAGACGTTCACCACCATCGCCGGGGGCTTCATCATCGCCGCCTTGG
TGCTGTGCCAGCGCTTGCTCGAAAAGCTTGAACGCCTCCCAGCCCGGACG
TCCGCCCGTTCTCTCCCGAGCCCACTATTGCAACGCCATTCCATGTCCAA
TTCCAACTTAGACGAGTACGCAGAGACTGGCAATCGGGCCTACGGCGATG
AACTCTTGCAAGATAGGAAACTCCGGCATCGGTATCGGAAGCTCAAGCAA
AATTGGCTGCACCAGGGACAAAAGCTGTTCCGCAAGATCCGGCGCAAAGG
CTCATCCTCGGCGGACCGGGTGAGCCGACGACTGGAGGACGGCCTCGAGT
CTATTTACAGCCCCATGGAGCTGCCCCAGCCCTCGAAGTTTGCGCGCGAG
GTCTCCTCGGATCTGATTTTGGACGGCATGCGCTTGAACGGGGATAGCTA
CATAGCTTTTATGGCAATTATGAATTCATGGAAGGTTTTTGGGGGGCGGG
ATGTGCCGTTGCTCCTAAAAATGTGCACGGGCGTCACGACCCTGACCCTC
AGCGCAGGCGGGTACCTCTTCGAGGAAGGCAAGCCCTTGGAGCGCTGTTT
ATACATATTGAAAGACGGCGAGCTGGAGATTTCTGTGCAACCTGACTTGG
GTCTCGACCAGCTCCAACCAGTCCACAGCAGCAGTGGCGACAGATCGACG
ACCCCTCCCCTCTTACCCCCTGATTTCCTCGAGCGGATCGACCAGGAGGG
CACCATCATTTCAGGTATCTTGGATTTTGTCGCGCTTTTGACGGAGTCCT
CTGTGGCGGAGTACTGTGCATCAGCGCGTTGTACCACGGACTGTCGCATC
CTGCAGGTGCCCATCATTCCCAACAACGGGGGCCAGAAGACCAGCAGCAG
CATCAGTATCTGCAGCGGGAGCACCCGAATCAGAAGCGGCTGCACGAGCA
CCAGCAGCAGCAACAGTAATGGTGTCAGTTCTTGCACACTCGATCAAGAA
GAGGAAGAGGCGAACGCTCCTCGTAACTCGGCGAGCGCCCAAGCCCGTTG
TCGGCTCATTCGAAGCTGTCTGATCCGTTCGCACCGTGTGACCCTTGCCA
CTGCCTATGCCTACCTGGGGGTCATTTACGACCTGTACCCTCGCCATCCT
ATCATTCCTATTGTCGGCTCTGCGTTATCCTCCCTTTCTTCTGAGACCCG
TTTGGAAGACAAGCAACAGCACGCCCTCAAGCGTCTCATCCGCCTTGTCC
TGGCACTTGACCCGGACCACGCCATTCCTGACCTCGAGCCATGTGTGGTG
CCGGTCTCATCTCGTTGCATCCCAACTTCCAGCGGCGGCAGTGATGGTAG
CTACGCCGTGGAACCTGGGACCGTCGCAGACTCGCGGCTGTTGCAACGAC
AGGAACGTATTGCGGGTAGCCCGTCAGGTCTTGAAGGAGGAGAAGGACGG
AGGGGGAATGGTCTTTGCACAGCCTCTTTGCCGTGGAACCAACCACGGCT
GTACCTGCTCAGGAGGGGCGATAGTCCACATGAGCTCGACGAGCAGTCGC
GCACCAGTCTCCACATCCTCGTCACCGGCCGCTTGCAAGTCACCAAGGTG
GATGCCATGGCCGCCGCGCCCGGAGTGGCAGGTCAAGCGCAGGGGCAGCA
GGGCCTCGGTCGAGGCTCCTCGCCATCTGGGGTCGGCAAGTCCATCTTCA
GCGACAACTATGGGGCTATGCGCGGACCCTTGGCCGCATCCATGGCAGCC
TCTCCCACCTTCCCCCTATCCTCTGGTTTCAAGGCACCAGGCGCCCCGAC
GGCGGCGGATTCATCATCAGCAGCATCACGGGGGGAGCATGGACCAGGGG
CGGTGTTGGGATACTCGTGTTTGTTGACGGGAGCGCCGGAGGATTGGTAT
AGCCCTCGGGGAAAGAATCGCGCGCGGTTGCGTTTGGAAGCTTCGTGCGA
TTCGTTGGTGGTGCAGATTCCCCTGGCCTTCGTTGAGAAAGCAATGAAGC
CCCACCCGCTGGCGACGCTGGCCTTGGCAGCCCGCAAGACATTGGAGACC
ATTCCTAAGGTGCTGCGGGTGATTGATTTCGGTGTCAAATGGAAGCAGCT
GCAGGCGGGAGAAGTGTTAGTTCGAGAAGGACAGCCCAGTGATGGGTGCC
TGTACGTGCTGCTCTATGGTCGGGCACGGTCGTCGATTCAGCAACGACCA
TCTGCGTCGGCGTCATCGCCGCCTCTACAGGCAGCCAGTGATGCGGTAGA
AGCGGCCAAGTTGCAGCAGCAGCAGGAGATAGCGCAGAAGGAGAATGTCG
TGGTGGTGGCAGACCACGGAAGAGGGACCTTAATAGGGGAGACAGAGATC
TTGACGGGAGGGATCCACCAAGTGACGGTTCAAGCCGTGCGTTACACGAG
CTTTGCCACAATCCCTTCCTCGGTTCTGAGTTTCCTTATTCGCCGCCATC
CCCGCGTATTGGCTCATTTGGCAGAGCATGTGGTGGAAAAGGCCTCGCAT
AACAGCCGACATCACCCTTTCTACCGAGACCGCACCCCCATGAAAATGTT
TACCTTGCCAATGCCTGTCCCTGCCGGTGCGGCTGACGGGAGGCGAGGGG
CAGGCTCTCCTTTCTGGGCGTCCTCTCTTGCCTCCTCGTCTTCCCCTGGG
GCGCGTCGGGTTGTGGTGGGCGAGCAGGGCGCCAAGACAATCCTTGTGTT
GCCTGCGTCGAATGGCGTACCGATGGATTACTTTATCAAGACCCTGGAGG
GAGCTATGGTCAAGGCGCGACATTCAGTCCGAACCGTGACAAGTGCCCTG
GCCGCCTCCGTGTTGGGCTTGGACGAGGACACGTACTACTCCGTAGCGTG
GTGCAGGGACAACGTCCTCTTGCTGGAGAGTTGGTTGACGCAGCAGGAGG
AGCAGCACGAAATTGTCTTATATCAATCGGACTGGGAGGACTCGGAATGG
AATCGGATGGCGGCGGGCATGGCGGATGTGGTTTTGCTGGTAGGAAACGC
GGCGGATCCCCCAGGGATAGCACATCTAGAATTGATATTGGATCCCTTTA
TTCGCAGCGCCCAAAAGCTTCTCATTCTTTTGCACGTGAATCCCAGCCCG
TATTACACCCCATCGGGCACGCGGCTGTGGATCGAGAAACGCGCGGGTAT
CCAACAGCATTACCATGTGCGAATGCATACACAATCTCCTCAGTTTGACC
AGCAGCATATTCGCTCGGATTTTGCGCGGTTGAGTCGGATCTTGACCGGG
ACGGCAGTGGGCCTCGTATTGGGAGGAGGGGGGGCAAGGGGGATGGCGCA
CTTGGGCTTGCTACGTGTACTGGAGGAGGAGGGGATTCCTATCGATCACA
TCGTGGGCGTGAGTATAGGGGCATTTATCGGTGGCTTGTACGCAAAGCGC
AGTTCGTACCTGGAAATCTTGCCATTTGCGAGCCGCTTTGCGCAAAACAT
GAGTAGCACCTGGCTTTTCATAAAGGATTTCACGCTTCCCTTCACATCGT
ACTTCAATGGTTATTCCTTTGGACGGGAATTGGAGAAGGCTTTTGGAGAC
ACGAAAATCGAGGACTGCTGGCTTTCATTCGCGTGTCTGACGGTTGATCT
GTCTGTCTCTAGGGAGCGGGTGCATCAGAATGGGACCCTGTGGCGGTATG
TCCGGGCCAGCATGACCTTGGCCGGATTGCTGCCGCCGCTGTGTGACGTG
GACCCGAAAGATGACGCCGTCCACTACCTGGTCGACGGTGGATACGTGAA
CAATTTGCCCGCAGACGTGATGAAGGAGGTATTTTCGGCCGAGACCATAA
TTGCCTGCGATATTGGCGTGGAGGTGCGTATGACGGGGCGGCAAGACTAC
GGCGATACTTTGACAGGACTTCAAGTCTTGCTGCACGCCCTCCTTCCGAC
CTGGGTGAGAGGTGGGGACGCGGAGACACTAAAGGCCCCTTCCATGGGTG
ACATTTCCTCTCAGCTTATGTACGTCCGCTCAGTACAACAGCTGGAACAG
GCCAAGGAGTCCATCGATTGTTACCTTCGACCACCGGTTACGCATTTTGG
AATCATGGAATGGAAGCGACACGTTGAGCTGCAGTCTCTCGGATATCTCT
ATTGTCGGAGCAGCGTGAGGGCTTGGCGGGAGGCGTTGAAGAAGGAGAAG
GGTGGCAGGGGAAGCATTACTGCGTTTCAGACAGTGACGAGTTCTGCCGG
AGATCACATGATCCGGGGTCGCTCGTTGTCGGCCTCACAACTAGGATAGC
GGCGTTGCGGTATAACTGGTGGATGGCGCAATTATAACCTGCGACATGGA
AGGATCCGTGAAGCCTAATATTATGTATTGCTCTGTATCTGTACTGGAGT
AGACGAGAATGGGTTACATTTGTGTGCGGGCGACTCAGGACTCAGCTTAA
AAGTTTTGCGGGTCTGCTTGATCATCTCTACGGGTCTGATCATCGCACAA
CAAATTAATAAATCTTTAATTAATGGGAAAGGGAAGAAATGCGAAGAAAT
GCTTTGCCGTCGATGGAAAATCGAAAACATCCCTCTAGACACTTCAAGAC
GTAATTTGTACGGTCAATTACTTCATCGATTATTTGCTAGAATTCATACG
CGACAATGGTCTACCCACAGAGGAAACCGAATCCATGAACCAGCTGCTTG
AAGGATTCCATCGATCGAAAGGAATACAAATGCTGAAAAGCAATCAAAT back to topprotein sequence of NO01G02270.1 >NO01G02270.1-protein ID=NO01G02270.1-protein|Name=NO01G02270.1|organism=Nannochloropsis oceanica|type=polypeptide|length=1446bp
MLAMLWAAMSWGWALAKDLPYTSFSLLFSYPKTFTTIAGGFIIAALVLCQ
RLLEKLERLPARTSARSLPSPLLQRHSMSNSNLDEYAETGNRAYGDELLQ
DRKLRHRYRKLKQNWLHQGQKLFRKIRRKGSSSADRVSRRLEDGLESIYS
PMELPQPSKFAREVSSDLILDGMRLNGDSYIAFMAIMNSWKVFGGRDVPL
LLKMCTGVTTLTLSAGGYLFEEGKPLERCLYILKDGELEISVQPDLGLDQ
LQPVHSSSGDRSTTPPLLPPDFLERIDQEGTIISGILDFVALLTESSVAE
YCASARCTTDCRILQVPIIPNNGGQKTSSSISICSGSTRIRSGCTSTSSS
NSNGVSSCTLDQEEEEANAPRNSASAQARCRLIRSCLIRSHRVTLATAYA
YLGVIYDLYPRHPIIPIVGSALSSLSSETRLEDKQQHALKRLIRLVLALD
PDHAIPDLEPCVVPVSSRCIPTSSGGSDGSYAVEPGTVADSRLLQRQERI
AGSPSGLEGGEGRRGNGLCTASLPWNQPRLYLLRRGDSPHELDEQSRTSL
HILVTGRLQVTKVDAMAAAPGVAGQAQGQQGLGRGSSPSGVGKSIFSDNY
GAMRGPLAASMAASPTFPLSSGFKAPGAPTAADSSSAASRGEHGPGAVLG
YSCLLTGAPEDWYSPRGKNRARLRLEASCDSLVVQIPLAFVEKAMKPHPL
ATLALAARKTLETIPKVLRVIDFGVKWKQLQAGEVLVREGQPSDGCLYVL
LYGRARSSIQQRPSASASSPPLQAASDAVEAAKLQQQQEIAQKENVVVVA
DHGRGTLIGETEILTGGIHQVTVQAVRYTSFATIPSSVLSFLIRRHPRVL
AHLAEHVVEKASHNSRHHPFYRDRTPMKMFTLPMPVPAGAADGRRGAGSP
FWASSLASSSSPGARRVVVGEQGAKTILVLPASNGVPMDYFIKTLEGAMV
KARHSVRTVTSALAASVLGLDEDTYYSVAWCRDNVLLLESWLTQQEEQHE
IVLYQSDWEDSEWNRMAAGMADVVLLVGNAADPPGIAHLELILDPFIRSA
QKLLILLHVNPSPYYTPSGTRLWIEKRAGIQQHYHVRMHTQSPQFDQQHI
RSDFARLSRILTGTAVGLVLGGGGARGMAHLGLLRVLEEEGIPIDHIVGV
SIGAFIGGLYAKRSSYLEILPFASRFAQNMSSTWLFIKDFTLPFTSYFNG
YSFGRELEKAFGDTKIEDCWLSFACLTVDLSVSRERVHQNGTLWRYVRAS
MTLAGLLPPLCDVDPKDDAVHYLVDGGYVNNLPADVMKEVFSAETIIACD
IGVEVRMTGRQDYGDTLTGLQVLLHALLPTWVRGGDAETLKAPSMGDISS
QLMYVRSVQQLEQAKESIDCYLRPPVTHFGIMEWKRHVELQSLGYLYCRS
SVRAWREALKKEKGGRGSITAFQTVTSSAGDHMIRGRSLSASQLG* back to topmRNA from alignment at chr1:589417..594695+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO01G02270.1 ID=NO01G02270.1|Name=NO01G02270.1|organism=Nannochloropsis oceanica|type=mRNA|length=5279bp|location=Sequence derived from alignment at chr1:589417..594695+ (Nannochloropsis oceanica)
TGATGAGCATGCATGCGTTTCACCTCTTCACTTCCAGGTCTTGCACAAGA
GTCATCGGCCCGTTCATGCGATGGCTGCGATCAGTAGATACGATCATCCT
TTTTGGAGAGCGCCGTTGTATGGATGAGTGGTTGCAGCGCCGGCTGTCGA
TCGACGAGAAAACGAGAAAGAGAGGAAAACCACGATCTCACTGCCTCCTC
TCTCTTACACAGGTAGAAAGAAGGGACAGGGGCGTCTCCTTGCAGCCGGA
GCCCACGCACAATGCTAGCCATGTTGTGGGCCGCCATGAGCTGGGGCTGG
GCTCTGGCCAAGGACCTGCCCTATACCTCTTTTTCCCTTCTTTTCAGCTA
CCCCAAGACGTTCACCACCATCGCCGGGGTAAGTCATGGCCCGAGCGTTG
AGGGAGGGAGTGGGGGACACAACACCGACATGTGGCAAAGGGCCTGTTCG
AGCGAATATAATGTGTTTTGATTAAATAAATTCCCCCCCTCTTACTCTAG
GGCTTCATCATCGCCGCCTTGGTGCTGTGCCAGCGCTTGCTCGAAAAGCT
TGAACGCCTCCCAGCCCGGACGTCCGCCCGTTCTCTCCCGAGCCCACTAT
TGCAACGCCATTCCATGTCCAATTCCAACTTAGACGAGTACGCAGAGACT
GGCAATCGGGCCTACGGCGATGAACTCTTGCAAGATAGGAAACTCCGGCA
TCGGTATCGGAAGGTACGCATAGACTGCTCCGCTTCTCCCCCTTCGATTC
GCCCTTCTCCCTCCCTCCCACTCACCCCTTTCCCGCGCACATCCTCTCCT
GAATCTTTCTTCACAATGTAGCTCAAGCAAAATTGGCTGCACCAGGGACA
AAAGCTGTTCCGCAAGATCCGGCGCAAAGGCTCATCCTCGGCGGACCGGG
TGAGCCGACGACTGGAGGACGGCCTCGAGTCTATTTACAGCCCCATGGAG
CTGCCCCAGCCCTCGAAGTTTGCGCGCGAGGTCTCCTCGGATCTGATTTT
GGACGGCATGCGCTTGAACGGGGATAGCTACATAGCTTTTATGGCAATTA
TGAATTCATGGAAGGTTTTTGGGGGGCGGGATGTGCCGTTGCTCCTAAAA
ATGTGCACGGGCGTCACGACCCTGACCCTCAGCGCAGGCGGGTACCTCTT
CGAGGAAGGCAAGCCCTTGGAGCGCTGTTTATACATATTGAAAGACGGCG
AGCTGGAGATTTCTGTGCAACCTGACTTGGGTCTCGACCAGCTCCAACCA
GTCCACAGCAGCAGTGGCGACAGATCGACGACCCCTCCCCTCTTACCCCC
TGATTTCCTCGAGCGGATCGACCAGGAGGGCACCATCATTTCAGGTATCT
TGGATTTTGTCGCGCTTTTGACGGAGTCCTCTGTGGCGGAGTACTGTGCA
TCAGCGCGTTGTACCACGGACTGTCGCATCCTGCAGGTGCCCATCATTCC
CAACAACGGGGGCCAGAAGACCAGCAGCAGCATCAGTATCTGCAGCGGGA
GCACCCGAATCAGAAGCGGCTGCACGAGCACCAGCAGCAGCAACAGTAAT
GGTGTCAGTTCTTGCACACTCGATCAAGAAGAGGAAGAGGCGAACGCTCC
TCGTAACTCGGCGAGCGCCCAAGCCCGTTGTCGGCTCATTCGAAGCTGTC
TGATCCGTTCGCACCGTGTGACCCTTGCCACTGCCTATGCCTACCTGGGG
GTCATTTACGACCTGTACCCTCGCCATCCTATCATTCCTATTGTCGGCTC
TGCGTTATCCTCCCTTTCTTCTGAGACCCGTTTGGAAGACAAGCAACAGC
ACGCCCTCAAGCGTCTCATCCGCCTTGTCCTGGCACTTGACCCGGACCAC
GCCATTCCTGACCTCGAGCCATGTGTGGTGCCGGTCTCATCTCGTTGCAT
CCCAACTTCCAGCGGCGGCAGTGATGGTAGCTACGCCGTGGAACCTGGGA
CCGTCGCAGACTCGCGGCTGTTGCAACGACAGGAACGTATTGCGGGTAGC
CCGTCAGGTCTTGAAGGAGGAGAAGGACGGAGGGGGAATGGTCTTTGCAC
AGCCTCTTTGCCGTGGAACCAACCACGGCTGTACCTGCTCAGGAGGGGCG
ATAGTCCACATGAGCTCGACGAGCAGTCGCGCACCAGTCTCCACATCCTC
GTCACCGGCCGCTTGCAAGTCACCAAGGTGGATGCCATGGCCGCCGCGCC
CGGAGTGGCAGGTCAAGCGCAGGGGCAGCAGGGCCTCGGTCGAGGCTCCT
CGCCATCTGGGGTCGGCAAGTCCATCTTCAGCGACAACTATGGGGCTATG
CGCGGACCCTTGGCCGCATCCATGGCAGCCTCTCCCACCTTCCCCCTATC
CTCTGGTTTCAAGGCACCAGGCGCCCCGACGGCGGCGGATTCATCATCAG
CAGCATCACGGGGGGAGCATGGACCAGGGGCGGTGTTGGGATACTCGTGT
TTGTTGACGGGAGCGCCGGAGGATTGGTATAGCCCTCGGGGAAAGAATCG
CGCGCGGTTGCGTTTGGAAGCTTCGTGCGATTCGTTGGTGGTGCAGATTC
CCCTGGCCTTCGTTGAGAAAGCAATGAAGCCCCACCCGCTGGCGACGCTG
GCCTTGGCAGCCCGCAAGACATTGGAGACCATTCCTAAGGTGCTGCGGGT
GATTGATTTCGGTGTCAAATGGAAGCAGCTGCAGGCGGGAGAAGTGTTAG
TTCGAGAAGGACAGCCCAGTGATGGGTGCCTGTACGTGCTGCTCTATGGT
CGGGCACGGTCGTCGATTCAGCAACGACCATCTGCGTCGGCGTCATCGCC
GCCTCTACAGGCAGCCAGTGATGCGGTAGAAGCGGCCAAGTTGCAGCAGC
AGCAGGAGATAGCGCAGAAGGAGAATGTCGTGGTGGTGGCAGACCACGGA
AGAGGGACCTTAATAGGGGAGACAGAGATCTTGACGGGAGGGATCCACCA
AGTGACGGTTCAAGCCGTGCGTTACACGAGCTTTGCCACAATCCCTTCCT
CGGTTCTGAGTTTCCTTATTCGCCGCCATCCCCGCGTATTGGCTCATTTG
GCAGAGCATGTGGTGGAAAAGGCCTCGCATAACAGCCGACATCACCCTTT
CTACCGAGACCGCACCCCCATGAAAATGTTTACCTTGCCAATGCCTGTCC
CTGCCGGTGCGGCTGACGGGAGGCGAGGGGCAGGCTCTCCTTTCTGGGCG
TCCTCTCTTGCCTCCTCGTCTTCCCCTGGGGCGCGTCGGGTTGTGGTGGG
CGAGCAGGGCGCCAAGACAATCCTTGTGTTGCCTGCGTCGAATGGCGTAC
CGATGGATTACTTTATCAAGACCCTGGAGGGAGCTATGGTCAAGGCGCGA
CATTCAGTCCGAACCGTGACAAGTGCCCTGGCCGCCTCCGTGTTGGGCTT
GGACGAGGACACGTACTACTCCGTAGCGTGGTGCAGGGACAACGTCCTCT
TGCTGGAGAGTTGGTTGACGCAGCAGGAGGAGCAGCACGAAATTGTCTTA
TATCAATCGGACTGGGAGGACTCGGAATGGAATCGGATGGCGGCGGGCAT
GGCGGATGTGGTTTTGCTGGTAGGAAACGCGGCGGATCCCCCAGGGATAG
CACATCTAGAATTGATATTGGATCCCTTTATTCGCAGCGCCCAAAAGCTT
CTCATTCTTTTGCACGTGAATCCCAGCCCGTATTACACCCCATCGGGCAC
GCGGCTGTGGATCGAGAAACGCGCGGGTATCCAACAGCATTACCATGTGC
GAATGCATACACAATCTCCTCAGTTTGACCAGCAGCATATTCGCTCGGAT
TTTGCGCGGTTGAGTCGGATCTTGACCGGGACGGCAGTGGGCCTCGTATT
GGGAGGAGGGGGGGCAAGGGGGATGGCGCACTTGGGCTTGCTACGTGTAC
TGGAGGAGGAGGGGATTCCTATCGATCACATCGTGGGCGTGAGTATAGGG
GCATTTATCGGTGGCTTGTACGCAAAGCGCAGTTCGTACCTGGAAATCTT
GCCATTTGCGAGCCGCTTTGCGCAAAACATGAGTAGCACCTGGCTTTTCA
TAAAGGATTTCACGCTTCCCTTCACATCGTACTTCAATGGTTATTCCTTT
GGACGGGAATTGGAGAAGGCTTTTGGAGACACGAAAATCGAGGACTGCTG
GCTTTCATTCGCGTGTCTGACGGTTGATCTGTCTGTCTCTAGGGAGCGGG
TGCATCAGAATGGGACCCTGTGGCGGTATGTCCGGGCCAGCATGACCTTG
GCCGGATTGCTGCCGCCGCTGTGTGACGTGGACCCGAAAGATGACGCCGT
CCACTACCTGGTCGACGGTGGATACGTGAACAATTTGCCCGCAGACGTGA
TGAAGGAGGTATTTTCGGCCGAGACCATAATTGCCTGCGATATTGGCGTG
GAGGTGCGTATGACGGGGCGGCAAGACTACGGCGATACTTTGACAGGACT
TCAAGTCTTGCTGCACGCCCTCCTTCCGACCTGGGTGAGAGGTGGGGACG
CGGAGACACTAAAGGCCCCTTCCATGGGTGACATTTCCTCTCAGCTTATG
TACGTCCGCTCAGTACAACAGCTGGAACAGGCCAAGGAGTCCATCGATTG
TTACCTTCGACCACCGGTTACGCATTTTGGAATCATGGAATGGAAGCGAC
ACGTTGAGCTGCAGTCTCTCGGATATCTCTATTGTCGGAGCAGCGTGAGG
GCTTGGCGGGAGGCGTTGAAGAAGGAGAAGGGTGGCAGGGGAAGCATTAC
TGCGTTTCAGACAGTGACGAGTTCTGCCGGAGATCACATGATCCGGGGTC
GCTCGTTGTCGGCCTCACAACTAGGATAGCGGCGTTGCGGTATAACTGGT
GGATGGCGCAATTATAACCTGCGACATGGAAGGATCCGTGAAGCCTAATA
TTATGTATTGCTCTGTATCTGTACTGGAGTAGACGAGAATGGGTTACATT
TGTGTGCGGGCGACTCAGGACTCAGCTTAAAAGTTTTGCGGGTCTGCTTG
ATCATCTCTACGGGTCTGATCATCGCACAACAAATTAATAAATCTTTAAT
TAATGGGAAAGGGAAGAAATGCGAAGAAATGCTTTGCCGTCGATGGAAAA
TCGAAAACATCCCTCTAGACACTTCAAGACGTAATTTGTACGGTCAATTA
CTTCATCGATTATTTGCTAGAATTCATACGCGACAATGGTCTACCCACAG
AGGAAACCGAATCCATGAACCAGCTGCTTGAAGGATTCCATCGATCGAAA
GGAATACAAATGCTGAAAAGCAATCAAAT back to topCoding sequence (CDS) from alignment at chr1:589417..594695+ >NO01G02270.1 ID=NO01G02270.1|Name=NO01G02270.1|organism=Nannochloropsis oceanica|type=CDS|length=4338bp|location=Sequence derived from alignment at chr1:589417..594695+ (Nannochloropsis oceanica)
ATGCTAGCCATGTTGTGGGCCGCCATGAGCTGGGGCTGGGCTCTGGCCAA
GGACCTGCCCTATACCTCTTTTTCCCTTCTTTTCAGCTACCCCAAGACGT
TCACCACCATCGCCGGGGGCTTCATCATCGCCGCCTTGGTGCTGTGCCAG
CGCTTGCTCGAAAAGCTTGAACGCCTCCCAGCCCGGACGTCCGCCCGTTC
TCTCCCGAGCCCACTATTGCAACGCCATTCCATGTCCAATTCCAACTTAG
ACGAGTACGCAGAGACTGGCAATCGGGCCTACGGCGATGAACTCTTGCAA
GATAGGAAACTCCGGCATCGGTATCGGAAGCTCAAGCAAAATTGGCTGCA
CCAGGGACAAAAGCTGTTCCGCAAGATCCGGCGCAAAGGCTCATCCTCGG
CGGACCGGGTGAGCCGACGACTGGAGGACGGCCTCGAGTCTATTTACAGC
CCCATGGAGCTGCCCCAGCCCTCGAAGTTTGCGCGCGAGGTCTCCTCGGA
TCTGATTTTGGACGGCATGCGCTTGAACGGGGATAGCTACATAGCTTTTA
TGGCAATTATGAATTCATGGAAGGTTTTTGGGGGGCGGGATGTGCCGTTG
CTCCTAAAAATGTGCACGGGCGTCACGACCCTGACCCTCAGCGCAGGCGG
GTACCTCTTCGAGGAAGGCAAGCCCTTGGAGCGCTGTTTATACATATTGA
AAGACGGCGAGCTGGAGATTTCTGTGCAACCTGACTTGGGTCTCGACCAG
CTCCAACCAGTCCACAGCAGCAGTGGCGACAGATCGACGACCCCTCCCCT
CTTACCCCCTGATTTCCTCGAGCGGATCGACCAGGAGGGCACCATCATTT
CAGGTATCTTGGATTTTGTCGCGCTTTTGACGGAGTCCTCTGTGGCGGAG
TACTGTGCATCAGCGCGTTGTACCACGGACTGTCGCATCCTGCAGGTGCC
CATCATTCCCAACAACGGGGGCCAGAAGACCAGCAGCAGCATCAGTATCT
GCAGCGGGAGCACCCGAATCAGAAGCGGCTGCACGAGCACCAGCAGCAGC
AACAGTAATGGTGTCAGTTCTTGCACACTCGATCAAGAAGAGGAAGAGGC
GAACGCTCCTCGTAACTCGGCGAGCGCCCAAGCCCGTTGTCGGCTCATTC
GAAGCTGTCTGATCCGTTCGCACCGTGTGACCCTTGCCACTGCCTATGCC
TACCTGGGGGTCATTTACGACCTGTACCCTCGCCATCCTATCATTCCTAT
TGTCGGCTCTGCGTTATCCTCCCTTTCTTCTGAGACCCGTTTGGAAGACA
AGCAACAGCACGCCCTCAAGCGTCTCATCCGCCTTGTCCTGGCACTTGAC
CCGGACCACGCCATTCCTGACCTCGAGCCATGTGTGGTGCCGGTCTCATC
TCGTTGCATCCCAACTTCCAGCGGCGGCAGTGATGGTAGCTACGCCGTGG
AACCTGGGACCGTCGCAGACTCGCGGCTGTTGCAACGACAGGAACGTATT
GCGGGTAGCCCGTCAGGTCTTGAAGGAGGAGAAGGACGGAGGGGGAATGG
TCTTTGCACAGCCTCTTTGCCGTGGAACCAACCACGGCTGTACCTGCTCA
GGAGGGGCGATAGTCCACATGAGCTCGACGAGCAGTCGCGCACCAGTCTC
CACATCCTCGTCACCGGCCGCTTGCAAGTCACCAAGGTGGATGCCATGGC
CGCCGCGCCCGGAGTGGCAGGTCAAGCGCAGGGGCAGCAGGGCCTCGGTC
GAGGCTCCTCGCCATCTGGGGTCGGCAAGTCCATCTTCAGCGACAACTAT
GGGGCTATGCGCGGACCCTTGGCCGCATCCATGGCAGCCTCTCCCACCTT
CCCCCTATCCTCTGGTTTCAAGGCACCAGGCGCCCCGACGGCGGCGGATT
CATCATCAGCAGCATCACGGGGGGAGCATGGACCAGGGGCGGTGTTGGGA
TACTCGTGTTTGTTGACGGGAGCGCCGGAGGATTGGTATAGCCCTCGGGG
AAAGAATCGCGCGCGGTTGCGTTTGGAAGCTTCGTGCGATTCGTTGGTGG
TGCAGATTCCCCTGGCCTTCGTTGAGAAAGCAATGAAGCCCCACCCGCTG
GCGACGCTGGCCTTGGCAGCCCGCAAGACATTGGAGACCATTCCTAAGGT
GCTGCGGGTGATTGATTTCGGTGTCAAATGGAAGCAGCTGCAGGCGGGAG
AAGTGTTAGTTCGAGAAGGACAGCCCAGTGATGGGTGCCTGTACGTGCTG
CTCTATGGTCGGGCACGGTCGTCGATTCAGCAACGACCATCTGCGTCGGC
GTCATCGCCGCCTCTACAGGCAGCCAGTGATGCGGTAGAAGCGGCCAAGT
TGCAGCAGCAGCAGGAGATAGCGCAGAAGGAGAATGTCGTGGTGGTGGCA
GACCACGGAAGAGGGACCTTAATAGGGGAGACAGAGATCTTGACGGGAGG
GATCCACCAAGTGACGGTTCAAGCCGTGCGTTACACGAGCTTTGCCACAA
TCCCTTCCTCGGTTCTGAGTTTCCTTATTCGCCGCCATCCCCGCGTATTG
GCTCATTTGGCAGAGCATGTGGTGGAAAAGGCCTCGCATAACAGCCGACA
TCACCCTTTCTACCGAGACCGCACCCCCATGAAAATGTTTACCTTGCCAA
TGCCTGTCCCTGCCGGTGCGGCTGACGGGAGGCGAGGGGCAGGCTCTCCT
TTCTGGGCGTCCTCTCTTGCCTCCTCGTCTTCCCCTGGGGCGCGTCGGGT
TGTGGTGGGCGAGCAGGGCGCCAAGACAATCCTTGTGTTGCCTGCGTCGA
ATGGCGTACCGATGGATTACTTTATCAAGACCCTGGAGGGAGCTATGGTC
AAGGCGCGACATTCAGTCCGAACCGTGACAAGTGCCCTGGCCGCCTCCGT
GTTGGGCTTGGACGAGGACACGTACTACTCCGTAGCGTGGTGCAGGGACA
ACGTCCTCTTGCTGGAGAGTTGGTTGACGCAGCAGGAGGAGCAGCACGAA
ATTGTCTTATATCAATCGGACTGGGAGGACTCGGAATGGAATCGGATGGC
GGCGGGCATGGCGGATGTGGTTTTGCTGGTAGGAAACGCGGCGGATCCCC
CAGGGATAGCACATCTAGAATTGATATTGGATCCCTTTATTCGCAGCGCC
CAAAAGCTTCTCATTCTTTTGCACGTGAATCCCAGCCCGTATTACACCCC
ATCGGGCACGCGGCTGTGGATCGAGAAACGCGCGGGTATCCAACAGCATT
ACCATGTGCGAATGCATACACAATCTCCTCAGTTTGACCAGCAGCATATT
CGCTCGGATTTTGCGCGGTTGAGTCGGATCTTGACCGGGACGGCAGTGGG
CCTCGTATTGGGAGGAGGGGGGGCAAGGGGGATGGCGCACTTGGGCTTGC
TACGTGTACTGGAGGAGGAGGGGATTCCTATCGATCACATCGTGGGCGTG
AGTATAGGGGCATTTATCGGTGGCTTGTACGCAAAGCGCAGTTCGTACCT
GGAAATCTTGCCATTTGCGAGCCGCTTTGCGCAAAACATGAGTAGCACCT
GGCTTTTCATAAAGGATTTCACGCTTCCCTTCACATCGTACTTCAATGGT
TATTCCTTTGGACGGGAATTGGAGAAGGCTTTTGGAGACACGAAAATCGA
GGACTGCTGGCTTTCATTCGCGTGTCTGACGGTTGATCTGTCTGTCTCTA
GGGAGCGGGTGCATCAGAATGGGACCCTGTGGCGGTATGTCCGGGCCAGC
ATGACCTTGGCCGGATTGCTGCCGCCGCTGTGTGACGTGGACCCGAAAGA
TGACGCCGTCCACTACCTGGTCGACGGTGGATACGTGAACAATTTGCCCG
CAGACGTGATGAAGGAGGTATTTTCGGCCGAGACCATAATTGCCTGCGAT
ATTGGCGTGGAGGTGCGTATGACGGGGCGGCAAGACTACGGCGATACTTT
GACAGGACTTCAAGTCTTGCTGCACGCCCTCCTTCCGACCTGGGTGAGAG
GTGGGGACGCGGAGACACTAAAGGCCCCTTCCATGGGTGACATTTCCTCT
CAGCTTATGTACGTCCGCTCAGTACAACAGCTGGAACAGGCCAAGGAGTC
CATCGATTGTTACCTTCGACCACCGGTTACGCATTTTGGAATCATGGAAT
GGAAGCGACACGTTGAGCTGCAGTCTCTCGGATATCTCTATTGTCGGAGC
AGCGTGAGGGCTTGGCGGGAGGCGTTGAAGAAGGAGAAGGGTGGCAGGGG
AAGCATTACTGCGTTTCAGACAGTGACGAGTTCTGCCGGAGATCACATGA
TCCGGGGTCGCTCGTTGTCGGCCTCACAACTAGGATAG back to top
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