NO01G01670.1, NO01G01670.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO01G01670.1
Unique NameNO01G01670.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length3039
Alignment locationchr1:422665..426077 -

Link to JBrowse

Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:422665..426077 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
BLAST of NO01G01670.1 vs.
Match: EWM29077.1 (myotubularin-related protein 2 [Nannochloropsis gaditana])

HSP 1 Score: 993.8 bits (2568), Expect = 3.800e-286
Identity = 578/1042 (55.47%), Postives = 691/1042 (66.31%), Query Frame = 0
Query:    1 MANSNKLEWSKVTLDPLSAMLNAPPRDDGEDNDEDNHNAAVALSSPLPASVLAPCAALSANLGALDLNVEASSPSSPPPLPSLPQPLPLYSSSPPPPPYAASFPSSLRPDTNPRKQHMNSVFNNLGTLLSNSLDTFANTISTSGAGSGPNSSMSNGSPGVPNFYSKRNDDSLQSTPRQTPASSFS--SSFLQPPPSTAPTPPPASKPKAADADMYSAMLTARASKPKAADEDMHSAMLTGEQRLASLPNLFLQTIPGSPILPGQLIITTYKIQFLPSPSVGRPPQLAHLPNEYFRIPMACIDKTERDLSRRQSLRDPSTALAIYVKDGRVLRVIVPEQP-----YNPSSPSSSSYQHHQQQQ-------RQQEESVVVVGIERIKGLIDAYAFPEDIHRHLFCFAHHRALVSTHSPLALPPRETQQYDLRNEWIRQFTRLNSSSSSTESSCWLGTPSCPWRLTNINTNHATCASYPSTLIVPAAATDEELMICAAFRSEQRLPVLTWGSPFCSASIWRASQPRVGVSGASCPEDEKVLRLIGAGEGGRLL----SSKQGDGGAVAGGAAAASPSPSTSFP--RPSQGTLRILDLRSKTAALANRATGHGYESSTNYPTSTLDFCNIGHIHDMRQAQHKLRSLVLAKDSADIEWGAQVENTRWLTHLRLVLNAAYRCAHFVQRGKSSVLLHCSHGWDRTSQVAALAQLFLDPFYRTVRGFQVLIEKDFLGFGHPFQLRTGHGLAA--------GGGGAEGGGGASRTDDQISPIFLQFLDCVWQVQQQHPRCFEFNSRYLLCLTEHLYDCRFGTFLGNVPKERPSLQRALAPSLWTYLEQPKVRKRVTNPVWGRGGGERGAGYGQLNRLMETPLPVLLRRVKLWSDYWLRWSSKPSHPPEAYVRMRKVEREGGIE-----EEEGESADLRLSWAWVEEEEDWLFWRENLLLANE------DSIQKEENEK--EG-GKLNRKTGDGKMDEAQVVAFNAQQEVGAEVDLID--IPAEPRGEERMEEVEEEQAEEEQAEEDFNEYM 999
            MANS+KLEWSKVT DPLSAMLNA    D +D D+       ALS P+PA+   P  ALS +LGA DL V+A+     PP+P +  P P     P PP YA+SFPSSLRPD N RKQ+M  V NNLG  LS+ L+    +++T+G  +G +SS  + S   P+  S             TPAS  +       PPP     PP        D      +  A  + P          MLTGEQRLA +P L LQ IPG P+L G L++TTY+IQFLP P+  RP Q+AHLP EYFR+PMACID+T+R+L+RR   R+P++A+ I+VKDGRVLR++ PE P      +PS P+SS                   E +   +G+ RIK LIDAYAFP+DIH+HLFCF H RAL    SPLAL P +   YDLR EW RQFTR   + S   S CWL  PSCPWR + +N    TC SYPSTL+VP A ++EEL++ AAFRSE RLPVLTWG+   SASIWRASQPRVGVSGASCPEDEK+LRLI  GEGG  L    S+   DG  +    A ASP+ S   P  RP QG LRILDLRSKTAALANRATGHGYES+++YPTSTLDFCNIGHIHDMRQAQH+LRSL  +KD+ ++EWGA VEN+RWL+++RLVL+AAYRCA  V R ++SVLLHCSHGWDRTSQVAALAQLFLDPFYRT+RGFQVLI+KDFL FGHPFQLRTGHGL A        GGGG   GGGA+R DDQISPIFLQFLDCVWQ+QQQHP+CFEFNSRYLLC+ EHLYDCRFGTFLGN  KERPSL  A APSLWT+LEQP VRKRVTNP WGR GG  G    Q+ RL+ETPL  LLRRV+LW DYWLRW++KP HP EAY  MR    EGG++       E E+ DL+LSWAWVEEEE+  +W + L   +       D +    N K  EG G    +T +G+     ++   +  E G E + ++        GEE  E  E+E  E  Q  ED  E++
Sbjct:    1 MANSSKLEWSKVTSDPLSAMLNATRVQDEDDEDKSGQTTE-ALSPPIPATQ-GPGMALSTSLGARDLVVDAALT---PPMPPVSHPPP-----PCPPLYASSFPSSLRPDLNSRKQNMGGVLNNLGNFLSSGLENITQSLTTAGTTNGNSSSDLSDSLASPSVSSS-----------CTPASGEACVEDIGSPPPPIPDFPP-------VDHSSAHPLSPAPVAAPPGDKALAQVGMLTGEQRLAFVPTLLLQAIPGGPLLSGDLLVTTYRIQFLPLPAAPRPHQVAHLPPEYFRVPMACIDRTDRELNRRPGPREPNSAVVIHVKDGRVLRLLGPEPPPTLRMPSPSPPTSSPSARASNPSGPSGRFVGDAEAASPAIGLGRIKDLIDAYAFPQDIHKHLFCFTHFRALRLAQSPLALAPPDADLYDLRREWTRQFTRRAPNGS---SPCWLEDPSCPWRFSRLNAEGGTCPSYPSTLVVPRAMSNEELLLSAAFRSEHRLPVLTWGAAASSASIWRASQPRVGVSGASCPEDEKLLRLI--GEGGEALPAWSSASPTDGPLL---QAVASPARSRLSPSRRPRQGILRILDLRSKTAALANRATGHGYESTSSYPTSTLDFCNIGHIHDMRQAQHRLRSLTFSKDTVEVEWGASVENSRWLSYVRLVLHAAYRCASLVHRERASVLLHCSHGWDRTSQVAALAQLFLDPFYRTLRGFQVLIQKDFLEFGHPFQLRTGHGLPAGGFGGGGGGGGGGGVGGGATRNDDQISPIFLQFLDCVWQLQQQHPQCFEFNSRYLLCVAEHLYDCRFGTFLGNSAKERPSLNHAAAPSLWTFLEQPAVRKRVTNPCWGRWGGSEGNAQAQVKRLIETPLSALLRRVRLWEDYWLRWTAKPCHPLEAYEAMR---MEGGVKGRGEGAAEEENIDLQLSWAWVEEEEERAYWLQALRCGSSAYANGGDGVGNGTNAKKVEGVGVSGGETREGRRGGVALMTLPSDVE-GDESESLEGGFVEGDDGEEGAEGREDEDEESVQVGEDSKEHV 1002          
The following BLAST results are available for this feature:
BLAST of NO01G01670.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1
Match NameE-valueIdentityDescription
EWM29077.13.800e-28655.47myotubularin-related protein 2 [Nannochloropsis ga... [more]
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G01670NO01G01670Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO01G01670.1NO01G01670.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO01G01670.1.cds1NO01G01670.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G01670.1.cds2NO01G01670.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G01670.1.cds3NO01G01670.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO01G01670.1 ID=NO01G01670.1|Name=NO01G01670.1|organism=Nannochloropsis oceanica|type=mRNA|length=3039bp
CAGCCTCTGCACAGGCAAGCAGCGTAATCAGCGTGGCCTGACATGGCGAA
CTCGAACAAGCTGGAATGGTCCAAGGTGACCTTGGACCCGCTCTCGGCCA
TGCTGAATGCACCCCCGCGCGACGACGGGGAGGATAATGATGAAGATAAC
CACAATGCGGCCGTTGCCCTTTCGTCGCCCCTACCCGCCTCGGTACTTGC
GCCCTGCGCAGCCTTGAGTGCCAACCTCGGCGCATTGGACCTCAACGTTG
AAGCCTCCTCTCCCTCCTCACCACCACCACTACCATCACTGCCACAACCA
TTGCCACTTTACTCCTCTTCTCCACCACCTCCACCCTATGCTGCTTCGTT
TCCCTCGTCTCTCCGGCCGGACACTAACCCGCGTAAGCAACACATGAATA
GTGTTTTCAACAACCTGGGAACTCTCCTTTCCAACAGCCTCGACACCTTC
GCCAACACCATTTCAACCTCCGGGGCCGGAAGTGGACCCAACAGCAGCAT
GTCAAATGGCTCTCCGGGTGTGCCAAATTTTTATTCCAAGCGCAACGACG
ATTCGCTGCAATCCACACCACGACAAACGCCCGCCTCTTCCTTTTCCTCC
TCCTTCCTACAGCCACCCCCAAGCACCGCCCCAACACCACCGCCCGCATC
AAAACCCAAAGCAGCAGATGCAGACATGTACTCTGCGATGCTTACTGCGC
GCGCATCAAAACCCAAAGCAGCAGATGAAGACATGCACTCTGCGATGCTT
ACTGGAGAACAACGCCTCGCCTCTCTCCCCAACCTGTTTCTGCAAACTAT
CCCTGGCTCCCCCATCCTTCCAGGCCAGCTCATCATCACTACCTACAAAA
TCCAATTTCTCCCCTCTCCTTCCGTGGGTCGCCCTCCACAACTTGCTCAT
TTGCCCAATGAGTATTTTCGGATACCCATGGCATGTATTGATAAAACCGA
AAGGGACTTAAGTAGAAGGCAAAGCTTGAGGGATCCTTCCACTGCTTTAG
CCATTTACGTCAAAGACGGACGCGTCTTGCGGGTGATCGTCCCCGAGCAA
CCATACAACCCTTCCTCTCCTTCCTCCTCCTCCTACCAGCATCACCAGCA
GCAGCAAAGGCAGCAAGAAGAATCTGTAGTGGTTGTAGGAATAGAGCGAA
TTAAGGGTCTGATCGATGCCTATGCCTTCCCTGAAGACATTCATAGGCAC
CTTTTCTGCTTTGCCCACCACCGCGCTCTCGTTTCCACCCACTCCCCTCT
TGCCCTTCCTCCCCGGGAGACCCAACAATACGACCTTCGAAATGAGTGGA
TAAGACAATTTACTCGCTTAAACAGCAGCAGCAGCAGTACCGAGAGCAGC
TGCTGGCTCGGTACCCCGTCTTGCCCTTGGCGCCTCACAAACATCAACAC
CAACCACGCCACCTGCGCCTCTTACCCCTCCACCCTCATCGTTCCCGCTG
CCGCTACAGACGAAGAACTCATGATTTGTGCTGCCTTCCGGTCGGAGCAA
CGTCTTCCCGTCCTAACCTGGGGTAGTCCCTTCTGCTCTGCTTCCATCTG
GCGGGCGAGTCAACCCCGCGTAGGGGTCTCTGGAGCCTCTTGTCCAGAAG
ACGAAAAGGTGTTACGTTTGATAGGCGCGGGAGAAGGAGGCCGGTTGTTA
TCTTCAAAACAGGGGGATGGTGGTGCTGTTGCTGGCGGTGCTGCTGCAGC
CTCTCCTTCGCCTTCCACATCGTTTCCTCGCCCTTCGCAAGGGACACTCC
GGATTCTTGACCTTCGTTCCAAGACTGCTGCCCTTGCTAACAGAGCTACC
GGTCATGGGTACGAGTCCTCCACCAACTACCCCACCTCTACCTTAGATTT
TTGCAACATTGGTCACATTCACGACATGCGCCAAGCCCAACACAAACTCC
GCTCTCTCGTCCTGGCCAAAGACTCTGCTGATATCGAATGGGGCGCCCAA
GTGGAAAACACCCGCTGGCTCACACACCTCCGCCTCGTCCTGAACGCCGC
CTACCGCTGTGCTCATTTCGTACAACGTGGGAAAAGCTCAGTTCTGCTCC
ATTGCTCACATGGATGGGATCGAACTTCACAAGTTGCTGCGCTGGCCCAG
CTTTTTTTGGATCCGTTTTATAGGACTGTGAGGGGCTTTCAGGTGTTGAT
CGAGAAGGATTTCTTGGGGTTCGGGCATCCTTTTCAATTGAGAACGGGCC
ATGGACTGGCGGCTGGAGGGGGAGGGGCTGAAGGAGGGGGAGGGGCGAGT
AGGACCGACGACCAAATTTCGCCGATTTTTCTGCAGTTTTTGGATTGTGT
CTGGCAGGTGCAGCAGCAGCACCCGAGGTGTTTTGAGTTTAACTCGAGGT
ATTTGCTGTGTCTGACAGAGCATCTGTATGACTGTCGGTTCGGCACCTTC
TTGGGGAATGTCCCTAAGGAGCGACCTTCCCTCCAACGTGCCCTTGCTCC
CTCTCTCTGGACCTACCTGGAGCAGCCCAAGGTGAGGAAGCGAGTGACGA
ACCCGGTGTGGGGGAGGGGGGGAGGGGAAAGGGGGGCGGGCTATGGGCAA
TTGAATCGGCTGATGGAGACGCCGTTGCCCGTGTTGTTGCGGAGGGTGAA
GCTGTGGAGTGATTATTGGCTGAGGTGGTCGAGTAAGCCTTCGCATCCAC
CAGAGGCGTATGTCAGGATGAGAAAAGTGGAGAGGGAGGGAGGGATAGAG
GAAGAGGAAGGGGAGAGTGCGGATTTGAGGTTGTCGTGGGCGTGGGTGGA
GGAGGAAGAGGATTGGTTATTCTGGAGAGAGAATTTGTTGTTGGCGAATG
AAGATAGTATACAGAAGGAGGAGAATGAGAAGGAGGGGGGAAAGTTGAAC
AGAAAAACTGGTGATGGAAAGATGGACGAGGCACAGGTGGTGGCGTTCAA
TGCACAGCAAGAGGTGGGGGCAGAAGTCGATCTCATTGACATTCCCGCCG
AGCCTCGTGGAGAGGAAAGGATGGAGGAGGTAGAGGAGGAACAGGCGGAG
GAGGAACAGGCGGAGGAGGATTTTAACGAGTACATGTAA
back to top

protein sequence of NO01G01670.1

>NO01G01670.1-protein ID=NO01G01670.1-protein|Name=NO01G01670.1|organism=Nannochloropsis oceanica|type=polypeptide|length=999bp
MANSNKLEWSKVTLDPLSAMLNAPPRDDGEDNDEDNHNAAVALSSPLPAS
VLAPCAALSANLGALDLNVEASSPSSPPPLPSLPQPLPLYSSSPPPPPYA
ASFPSSLRPDTNPRKQHMNSVFNNLGTLLSNSLDTFANTISTSGAGSGPN
SSMSNGSPGVPNFYSKRNDDSLQSTPRQTPASSFSSSFLQPPPSTAPTPP
PASKPKAADADMYSAMLTARASKPKAADEDMHSAMLTGEQRLASLPNLFL
QTIPGSPILPGQLIITTYKIQFLPSPSVGRPPQLAHLPNEYFRIPMACID
KTERDLSRRQSLRDPSTALAIYVKDGRVLRVIVPEQPYNPSSPSSSSYQH
HQQQQRQQEESVVVVGIERIKGLIDAYAFPEDIHRHLFCFAHHRALVSTH
SPLALPPRETQQYDLRNEWIRQFTRLNSSSSSTESSCWLGTPSCPWRLTN
INTNHATCASYPSTLIVPAAATDEELMICAAFRSEQRLPVLTWGSPFCSA
SIWRASQPRVGVSGASCPEDEKVLRLIGAGEGGRLLSSKQGDGGAVAGGA
AAASPSPSTSFPRPSQGTLRILDLRSKTAALANRATGHGYESSTNYPTST
LDFCNIGHIHDMRQAQHKLRSLVLAKDSADIEWGAQVENTRWLTHLRLVL
NAAYRCAHFVQRGKSSVLLHCSHGWDRTSQVAALAQLFLDPFYRTVRGFQ
VLIEKDFLGFGHPFQLRTGHGLAAGGGGAEGGGGASRTDDQISPIFLQFL
DCVWQVQQQHPRCFEFNSRYLLCLTEHLYDCRFGTFLGNVPKERPSLQRA
LAPSLWTYLEQPKVRKRVTNPVWGRGGGERGAGYGQLNRLMETPLPVLLR
RVKLWSDYWLRWSSKPSHPPEAYVRMRKVEREGGIEEEEGESADLRLSWA
WVEEEEDWLFWRENLLLANEDSIQKEENEKEGGKLNRKTGDGKMDEAQVV
AFNAQQEVGAEVDLIDIPAEPRGEERMEEVEEEQAEEEQAEEDFNEYM*
back to top

mRNA from alignment at chr1:422665..426077-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO01G01670.1 ID=NO01G01670.1|Name=NO01G01670.1|organism=Nannochloropsis oceanica|type=mRNA|length=3413bp|location=Sequence derived from alignment at chr1:422665..426077- (Nannochloropsis oceanica)
CAGCCTCTGCACAGGCAAGCAGCGTAATCAGCGTGGCCTGACATGGCGAA CTCGAACAAGCTGGAATGGTCCAAGGTAAGGCAATGAAACGCGCGGCTTC CCAAGAAATCATCATCATCATCTTACCCCTCCACGCCCCATGCCCGACTC TGAAGGTGACCTTGGACCCGCTCTCGGCCATGCTGAATGCACCCCCGCGC GACGACGGGGAGGATAATGATGAAGATAACCACAATGCGGCCGTTGCCCT TTCGTCGCCCCTACCCGCCTCGGTACTTGCGCCCTGCGCAGCCTTGAGTG CCAACCTCGGCGCATTGGACCTCAACGTTGAAGCCTCCTCTCCCTCCTCA CCACCACCACTACCATCACTGCCACAACCATTGCCACTTTACTCCTCTTC TCCACCACCTCCACCCTATGCTGCTTCGTTTCCCTCGTCTCTCCGGCCGG ACACTAACCCGCGTAAGCAACACATGAATAGTGTTTTCAACAACCTGGGA ACTCTCCTTTCCAACAGCCTCGACACCTTCGCCAACACCATTTCAACCTC CGGGGCCGGAAGTGGACCCAACAGCAGCATGTCAAATGGCTCTCCGGGTG TGCCAAATTTTTATTCCAAGCGCAACGACGATTCGCTGCAATCCACACCA CGACAAACGCCCGCCTCTTCCTTTTCCTCCTCCTTCCTACAGCCACCCCC AAGCACCGCCCCAACACCACCGCCCGCATCAAAACCCAAAGCAGCAGATG CAGACATGTACTCTGCGATGCTTACTGCGCGCGCATCAAAACCCAAAGCA GCAGATGAAGACATGCACTCTGCGATGCTTACTGGAGAACAACGCCTCGC CTCTCTCCCCAACCTGTTTCTGCAAACTATCCCTGGCTCCCCCATCCTTC CAGGCCAGCTCATCATCACTACCTACAAAATCCAATTTCTCCCCTCTCCT TCCGTGGGTCGCCCTCCACAACTTGCTCATTTGCCCAATGAGTATTTTCG GATACCCATGGCATGTATTGATAAAACCGAAAGGGACTTAAGTAGAAGGC AAAGCTTGAGGGATCCTTCCACTGCTTTAGCCATTTACGTCAAAGACGGA CGCGTCTTGCGGGTGATCGTCCCCGAGCAACCATACAACCCTTCCTCTCC TTCCTCCTCCTCCTACCAGCATCACCAGCAGCAGCAAAGGCAGCAAGAAG AATCTGTAGTGGTTGTAGGAATAGAGCGAATTAAGGGTCTGATCGATGCC TATGCCTTCCCTGAAGACATTCATAGGCACCTTTTCTGCTTTGCCCACCA CCGCGCTCTCGTTTCCACCCACTCCCCTCTTGCCCTTCCTCCCCGGGAGA CCCAACAATACGACCTTCGAAATGAGTGGATAAGACAATTTACTCGCTTA AACAGCAGCAGCAGCAGTACCGAGAGCAGCTGCTGGCTCGGTACCCCGTC TTGCCCTTGGCGCCTCACAAACATCAACACCAACCACGCCACCTGCGCCT CTTACCCCTCCACCCTCATCGTTCCCGCTGCCGCTACAGACGAAGAACTC ATGATTTGTGCTGCCTTCCGGTCGGAGCAACGTCTTCCCGTCCTAACCTG GGGTAGTCCCTTCTGCTCTGCTTCCATCTGGCGGGCGAGTCAACCCCGCG TAGGGGTCTCTGGAGCCTCTTGTCCAGAAGACGAAAAGGTGTTACGTTTG ATAGGCGCGGGAGAAGGAGGCCGGTTGTTATCTTCAAAACAGGGGGATGG TGGTGCTGTTGCTGGCGGTGCTGCTGCAGCCTCTCCTTCGCCTTCCACAT CGTTTCCTCGCCCTTCGCAAGGGACACTCCGGATTCTTGACCTTCGTTCC AAGACTGCTGCCCTTGCTAACAGAGCTACCGGTCATGGGTATGTTATTAG TAGCTTTATTTTTGATTACTCTTTCCCTCCTTCCTCCCTCTACCTGAAGC TTATGCATGATGTTCAGTGACTCCCTTTCTCTTTTTCTCCCTCTCATTCT GATGAAGTATTTCTCTTAGTCCACCATCAATCACACGATGGCAACGGTCG AGACCGGCAGTGTAAGCCATGTCCACGACGTGTGCCTAGCCCATCAGAAG CTCCGTCCTCTTGTATCAGGAAAAAAAGAAATTAAGTCAGCTCCCCCTTC CTTCCCTCCCTACTTTTTCCCCTCCTTCCCAGGTACGAGTCCTCCACCAA CTACCCCACCTCTACCTTAGATTTTTGCAACATTGGTCACATTCACGACA TGCGCCAAGCCCAACACAAACTCCGCTCTCTCGTCCTGGCCAAAGACTCT GCTGATATCGAATGGGGCGCCCAAGTGGAAAACACCCGCTGGCTCACACA CCTCCGCCTCGTCCTGAACGCCGCCTACCGCTGTGCTCATTTCGTACAAC GTGGGAAAAGCTCAGTTCTGCTCCATTGCTCACATGGATGGGATCGAACT TCACAAGTTGCTGCGCTGGCCCAGCTTTTTTTGGATCCGTTTTATAGGAC TGTGAGGGGCTTTCAGGTGTTGATCGAGAAGGATTTCTTGGGGTTCGGGC ATCCTTTTCAATTGAGAACGGGCCATGGACTGGCGGCTGGAGGGGGAGGG GCTGAAGGAGGGGGAGGGGCGAGTAGGACCGACGACCAAATTTCGCCGAT TTTTCTGCAGTTTTTGGATTGTGTCTGGCAGGTGCAGCAGCAGCACCCGA GGTGTTTTGAGTTTAACTCGAGGTATTTGCTGTGTCTGACAGAGCATCTG TATGACTGTCGGTTCGGCACCTTCTTGGGGAATGTCCCTAAGGAGCGACC TTCCCTCCAACGTGCCCTTGCTCCCTCTCTCTGGACCTACCTGGAGCAGC CCAAGGTGAGGAAGCGAGTGACGAACCCGGTGTGGGGGAGGGGGGGAGGG GAAAGGGGGGCGGGCTATGGGCAATTGAATCGGCTGATGGAGACGCCGTT GCCCGTGTTGTTGCGGAGGGTGAAGCTGTGGAGTGATTATTGGCTGAGGT GGTCGAGTAAGCCTTCGCATCCACCAGAGGCGTATGTCAGGATGAGAAAA GTGGAGAGGGAGGGAGGGATAGAGGAAGAGGAAGGGGAGAGTGCGGATTT GAGGTTGTCGTGGGCGTGGGTGGAGGAGGAAGAGGATTGGTTATTCTGGA GAGAGAATTTGTTGTTGGCGAATGAAGATAGTATACAGAAGGAGGAGAAT GAGAAGGAGGGGGGAAAGTTGAACAGAAAAACTGGTGATGGAAAGATGGA CGAGGCACAGGTGGTGGCGTTCAATGCACAGCAAGAGGTGGGGGCAGAAG TCGATCTCATTGACATTCCCGCCGAGCCTCGTGGAGAGGAAAGGATGGAG GAGGTAGAGGAGGAACAGGCGGAGGAGGAACAGGCGGAGGAGGATTTTAA CGAGTACATGTAA
back to top

Coding sequence (CDS) from alignment at chr1:422665..426077-

>NO01G01670.1 ID=NO01G01670.1|Name=NO01G01670.1|organism=Nannochloropsis oceanica|type=CDS|length=2997bp|location=Sequence derived from alignment at chr1:422665..426077- (Nannochloropsis oceanica)
ATGGCGAACTCGAACAAGCTGGAATGGTCCAAGGTGACCTTGGACCCGCT
CTCGGCCATGCTGAATGCACCCCCGCGCGACGACGGGGAGGATAATGATG
AAGATAACCACAATGCGGCCGTTGCCCTTTCGTCGCCCCTACCCGCCTCG
GTACTTGCGCCCTGCGCAGCCTTGAGTGCCAACCTCGGCGCATTGGACCT
CAACGTTGAAGCCTCCTCTCCCTCCTCACCACCACCACTACCATCACTGC
CACAACCATTGCCACTTTACTCCTCTTCTCCACCACCTCCACCCTATGCT
GCTTCGTTTCCCTCGTCTCTCCGGCCGGACACTAACCCGCGTAAGCAACA
CATGAATAGTGTTTTCAACAACCTGGGAACTCTCCTTTCCAACAGCCTCG
ACACCTTCGCCAACACCATTTCAACCTCCGGGGCCGGAAGTGGACCCAAC
AGCAGCATGTCAAATGGCTCTCCGGGTGTGCCAAATTTTTATTCCAAGCG
CAACGACGATTCGCTGCAATCCACACCACGACAAACGCCCGCCTCTTCCT
TTTCCTCCTCCTTCCTACAGCCACCCCCAAGCACCGCCCCAACACCACCG
CCCGCATCAAAACCCAAAGCAGCAGATGCAGACATGTACTCTGCGATGCT
TACTGCGCGCGCATCAAAACCCAAAGCAGCAGATGAAGACATGCACTCTG
CGATGCTTACTGGAGAACAACGCCTCGCCTCTCTCCCCAACCTGTTTCTG
CAAACTATCCCTGGCTCCCCCATCCTTCCAGGCCAGCTCATCATCACTAC
CTACAAAATCCAATTTCTCCCCTCTCCTTCCGTGGGTCGCCCTCCACAAC
TTGCTCATTTGCCCAATGAGTATTTTCGGATACCCATGGCATGTATTGAT
AAAACCGAAAGGGACTTAAGTAGAAGGCAAAGCTTGAGGGATCCTTCCAC
TGCTTTAGCCATTTACGTCAAAGACGGACGCGTCTTGCGGGTGATCGTCC
CCGAGCAACCATACAACCCTTCCTCTCCTTCCTCCTCCTCCTACCAGCAT
CACCAGCAGCAGCAAAGGCAGCAAGAAGAATCTGTAGTGGTTGTAGGAAT
AGAGCGAATTAAGGGTCTGATCGATGCCTATGCCTTCCCTGAAGACATTC
ATAGGCACCTTTTCTGCTTTGCCCACCACCGCGCTCTCGTTTCCACCCAC
TCCCCTCTTGCCCTTCCTCCCCGGGAGACCCAACAATACGACCTTCGAAA
TGAGTGGATAAGACAATTTACTCGCTTAAACAGCAGCAGCAGCAGTACCG
AGAGCAGCTGCTGGCTCGGTACCCCGTCTTGCCCTTGGCGCCTCACAAAC
ATCAACACCAACCACGCCACCTGCGCCTCTTACCCCTCCACCCTCATCGT
TCCCGCTGCCGCTACAGACGAAGAACTCATGATTTGTGCTGCCTTCCGGT
CGGAGCAACGTCTTCCCGTCCTAACCTGGGGTAGTCCCTTCTGCTCTGCT
TCCATCTGGCGGGCGAGTCAACCCCGCGTAGGGGTCTCTGGAGCCTCTTG
TCCAGAAGACGAAAAGGTGTTACGTTTGATAGGCGCGGGAGAAGGAGGCC
GGTTGTTATCTTCAAAACAGGGGGATGGTGGTGCTGTTGCTGGCGGTGCT
GCTGCAGCCTCTCCTTCGCCTTCCACATCGTTTCCTCGCCCTTCGCAAGG
GACACTCCGGATTCTTGACCTTCGTTCCAAGACTGCTGCCCTTGCTAACA
GAGCTACCGGTCATGGGTACGAGTCCTCCACCAACTACCCCACCTCTACC
TTAGATTTTTGCAACATTGGTCACATTCACGACATGCGCCAAGCCCAACA
CAAACTCCGCTCTCTCGTCCTGGCCAAAGACTCTGCTGATATCGAATGGG
GCGCCCAAGTGGAAAACACCCGCTGGCTCACACACCTCCGCCTCGTCCTG
AACGCCGCCTACCGCTGTGCTCATTTCGTACAACGTGGGAAAAGCTCAGT
TCTGCTCCATTGCTCACATGGATGGGATCGAACTTCACAAGTTGCTGCGC
TGGCCCAGCTTTTTTTGGATCCGTTTTATAGGACTGTGAGGGGCTTTCAG
GTGTTGATCGAGAAGGATTTCTTGGGGTTCGGGCATCCTTTTCAATTGAG
AACGGGCCATGGACTGGCGGCTGGAGGGGGAGGGGCTGAAGGAGGGGGAG
GGGCGAGTAGGACCGACGACCAAATTTCGCCGATTTTTCTGCAGTTTTTG
GATTGTGTCTGGCAGGTGCAGCAGCAGCACCCGAGGTGTTTTGAGTTTAA
CTCGAGGTATTTGCTGTGTCTGACAGAGCATCTGTATGACTGTCGGTTCG
GCACCTTCTTGGGGAATGTCCCTAAGGAGCGACCTTCCCTCCAACGTGCC
CTTGCTCCCTCTCTCTGGACCTACCTGGAGCAGCCCAAGGTGAGGAAGCG
AGTGACGAACCCGGTGTGGGGGAGGGGGGGAGGGGAAAGGGGGGCGGGCT
ATGGGCAATTGAATCGGCTGATGGAGACGCCGTTGCCCGTGTTGTTGCGG
AGGGTGAAGCTGTGGAGTGATTATTGGCTGAGGTGGTCGAGTAAGCCTTC
GCATCCACCAGAGGCGTATGTCAGGATGAGAAAAGTGGAGAGGGAGGGAG
GGATAGAGGAAGAGGAAGGGGAGAGTGCGGATTTGAGGTTGTCGTGGGCG
TGGGTGGAGGAGGAAGAGGATTGGTTATTCTGGAGAGAGAATTTGTTGTT
GGCGAATGAAGATAGTATACAGAAGGAGGAGAATGAGAAGGAGGGGGGAA
AGTTGAACAGAAAAACTGGTGATGGAAAGATGGACGAGGCACAGGTGGTG
GCGTTCAATGCACAGCAAGAGGTGGGGGCAGAAGTCGATCTCATTGACAT
TCCCGCCGAGCCTCGTGGAGAGGAAAGGATGGAGGAGGTAGAGGAGGAAC
AGGCGGAGGAGGAACAGGCGGAGGAGGATTTTAACGAGTACATGTAA
back to top
Synonyms
Publications