NO01G01520.1, NO01G01520.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G01520.1
Unique Name	NO01G01520.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	3825
Alignment location	chr1:384839..388860 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:384839..388860 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO01G01520.1 vs.
Match: CBJ27758.1 (conserved unknown protein [Ectocarpus siliculosus])

HSP 1 Score: 171.4 bits (433), Expect = 1.000e-38
Identity = 168/490 (34.29%), Postives = 261/490 (53.27%), Query Frame = 0

Query:  251 ETIQELQLRLAKAEEEVLVVKEEARGWKGEVEGQRHRLTAAVARAEEAQKAS---EKWRVRLEAKELEGEHWRQEARRWEDRVKGERERADRAEEGRRRLADEVDVLREKADAAHDLEQILEKYKLRLEQAAMAKQHYRDLEEQNAKYLDQVLALEAEAKASVPSLKRAIEQYKDQVVGLERDRYQAMERREVMEGELERAKEEVEGAREARRFLMEECQELKRVVQQLHLQQEQPQGSQEGQPQLPGGGRSGEEERDEGGLALFEDAWDN---KEKLLRLERENRMLRKQVEDGGWPRVGEGEDLLLLKSQMQDLRRVKEEREAEAIAAKKRTAELEGN-------VAMLRG------QCEEMEEEVGRMKEEGVGRAAAAAAAAVEGKEKALARVQLLLQQEKEWEEQVLRLKGEKDRLEEYAKKTLRTVQEKYVQTLGDLKGSNTEYKARNQALEARLLEDRQAQKREEKLLMSCVYGIGMEMLQSE 722
            E  +E  LR  +AE+EV  +KE        VE + H   A  AR EE    S   ++    LE KE   +   Q+ R  E ++  E +     E   R++ DE+D+ + KA     +E  +EKYK RLE  A  +Q  ++L++ N+KYLDQ+L LE+ AK ++P+L   IEQYKDQ VGLER  ++A     V E E++R +EE+E A +A+ F  +E   L+          +Q +   +   + P  G     +RD     LFE A +    +E++ R +RE  +L+ QV +GG      G  L +L+SQ++D  RVK+ER AEA+AAK+  A+LE         V+ ++G      Q E+   ++  MKEE + R    A    + +E+     Q +  + KE E QV  L+ +K++LE Y KKTL   Q+KY+  +   K    E   +   LE+++ +D+ A KREE+LLMS VY +GM++++ +
Sbjct:  161 ERERESALR-TEAEKEVAALKERT------VELEAHA-KARSARDEETSSMSASLQRTMSSLEDKEAGLQQALQDTRVAESKLAQESKARAEKEFELRQMEDELDIAKAKASQLTKMEATVEKYKRRLEDMAELRQQVKELDDLNSKYLDQMLKLESTAK-TIPTLTMKIEQYKDQAVGLERQNFEASSAVVVKETEVQRLREELEAALQAKMFFEDELIALR----------DQNKAHADAAEEDPSKGN----QRD-----LFEGAANRAELREQVARKDREIALLKAQVAEGGGQDGEGGSRLEVLESQLEDALRVKDERSAEALAAKRNAADLEQKNNKLEQLVSEMKGAPQSAAQAEKSSAKIQSMKEE-MDRLRVLA----DDRERLSMTAQSMEDRLKERETQVNNLQTDKEKLESYTKKTLHKFQDKYMVAISHCKAQIAEKNEKIDYLESKISQDKAASKREERLLMSSVYELGMDIIERQ 617

The following BLAST results are available for this feature:

BLAST of NO01G01520.1 vs.

BLAST of NO01G01520.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
CBJ27758.1	1.000e-38	34.29	conserved unknown protein [Ectocarpus siliculosus]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO01G01520	NO01G01520	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO01G01520.1	NO01G01520.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO01G01520.1.cds1	NO01G01520.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G01520.1.cds2	NO01G01520.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr1:384839..388860-
coding sequence from alignment at chr1:384839..388860-

mRNA sequence

>NO01G01520.1 ID=NO01G01520.1|Name=NO01G01520.1|organism=Nannochloropsis oceanica|type=mRNA|length=3825bp
TCGTAGTTTTTGTAGTTGGTCTGTGATGGGTGTGCGTAGGTTAGGGCGAG
GGGGGAGTTGTGTCTCATAAGCAAAAATGGCATGAGAGATGATACGGCGC
AGGTAAAGCACGCCGTCGAAGCGTCGTTCCAACACCTCTCAGGGGTGTGC
TGTGGCACTGGAAGGGCGTGAGGTGGTGGAGCCGTCTCAAGCTCTGTCGC
TTCTTGTGCTTGAGGTCCCATTTGAAGAGGCTTGTTCCACTTCTTCCATT
CCCCCGCCGCCCCCCGCGCTTGACACTAGACCAAAAGGGACGAAAGGCGG
GGGGCGTGACCTACCAAGAATGAACTGAACACGAGCTTTAGAGTCTGAAA
GGAAGGCATAGGCACGCACTTAGACGTGGAGACCGTGCCTGCAAATGCGG
CCACCTCAGCTTTTGGTATCGGGATGGGGATCGTTGCCATCGCTGAAGCG
ACGATGCCGTTGCGGCAACAAGGTGTGGGTGGCTCCGCTTTATGAGATTC
CACACCCACAAGGCCACAAACAGCCCCCTCTGACGGCAGTGTGACAGTCC
CCTAGCTCACCCGTTGATATAGTCGTAGAATGAAGAGCGGATTGCCGAGA
GTTGGTTGAATGATTGCCTGCTCTCCTCCAATGACGCTTTTTGTTGATGC
CTCTGGTGCATGGGCCCTGGTTGCTCACTTCCACACTTCCACTTCACGTC
TTACTCGCCACGCCCCAGTTCTCACGAGCCAATTAGCTACAGGAACGAAA
TTAAGAGCAACCTTGCACCTTCTCACTTCGCATGTAGTCGGAGCTCTTCC
TGGTTCCATCATGCATCCTCCCAATATTTGCATTATCCACTCCGCACAAC
CACCTCACCCCCACACTCTCACACGACCAAAGTACTCCAATGATTACAAA
GGAAGAAGAAGACACCACTGCGACAGCCGAGGCCTTAGTGCAGTGGATCA
ATTCCTTCGGCCCCCTCCCTCCCGGTGCCACCTCTCCTTCTTCCGCCCCT
CCTCCCCTCATAAAGCTCGAGCAACTTACTGACGGCCTCGTGTTGGCCGA
CGTCCTCCATGACATTGCCCCCACCCGCTTCCCACGAGACCTGCTCGCGC
GCCCTCTTTCCTCCTCGGCTGCCTCAACCCCGACCACGCCCACGGCGAAT
TGGGCCTTAGCATTGACAAATCTCAAGAAATTAATGCGCCTCCTCGAGGC
ACATTACGAAGAAGAACTCGGTCTACACCTTCACGGCGGACGAGGCGGCA
ACAGCTACTTTGCCTCGCTAGATCTTGCGGGAATCGCCCGGGAAAAACGC
AATAAGGATATTATCAGGCTTGTGGAGTTGGTTGTCTTGGCAGCAGTCCG
GGCGCCAGCCCCCGAAAAAGCACGGGCGTACATCGAGAGAATAATGGGCC
TGTCCCCCGAGGCACAAGCCTTTTTGAAAGAGAGTGTGGAGAAGACTCTG
CAACGTGCTACTTCATTCGTCTCCTCGACTTCCCCCTCCTCCTCCTTGTC
CTCGTCCTTTCTGGATACCATCTCTAGTGCAACTTCATCCTCCTTCTCTT
CCTCCCTCCCTTCCTCGTTCCCCTGTACCACCACTGCTGCATCCACAGCC
CTGGCGGCCGATCAACAAAGGGAGAACGCGCATTTGCATGAAACCATCCA
GGAGCTACAATTACGTTTAGCCAAGGCTGAGGAGGAAGTACTGGTCGTAA
AGGAGGAAGCGAGGGGGTGGAAGGGAGAAGTGGAGGGGCAACGCCACCGC
TTGACAGCAGCTGTAGCTCGAGCAGAGGAAGCACAGAAGGCGAGCGAGAA
ATGGAGGGTGAGACTGGAGGCGAAAGAGCTAGAAGGAGAGCATTGGAGAC
AGGAAGCAAGGAGGTGGGAGGACCGGGTGAAGGGGGAGAGGGAGAGAGCG
GATAGAGCGGAGGAGGGGAGGAGGAGGCTGGCGGATGAGGTGGATGTGTT
GCGGGAGAAAGCGGACGCCGCCCATGACTTGGAGCAGATCCTTGAGAAAT
ACAAACTCCGACTCGAACAGGCTGCTATGGCCAAGCAGCACTACCGCGAT
CTAGAGGAGCAAAACGCCAAATACCTGGATCAGGTGCTGGCGTTGGAGGC
AGAGGCAAAAGCGAGTGTCCCGAGCCTCAAGAGAGCGATCGAGCAGTACA
AGGATCAAGTAGTCGGGCTGGAGAGGGACCGTTACCAGGCCATGGAACGG
AGGGAGGTCATGGAGGGGGAGTTGGAGAGGGCGAAGGAGGAGGTGGAGGG
CGCGAGGGAGGCACGGCGGTTCCTGATGGAGGAATGTCAGGAATTGAAAC
GGGTCGTGCAGCAGCTACATCTGCAGCAGGAGCAGCCGCAGGGATCGCAG
GAGGGACAGCCGCAATTACCGGGCGGAGGAAGGTCAGGAGAGGAGGAAAG
GGATGAAGGAGGTTTGGCTTTGTTTGAGGATGCCTGGGACAATAAAGAGA
AATTGCTGCGGCTGGAGCGAGAGAATAGGATGTTACGAAAACAGGTGGAG
GACGGGGGCTGGCCGAGGGTAGGGGAGGGAGAGGACCTCTTGCTGCTGAA
ATCGCAAATGCAGGATCTACGGAGGGTGAAGGAGGAGAGGGAGGCTGAGG
CAATAGCGGCTAAGAAGAGAACAGCCGAATTGGAGGGGAACGTGGCTATG
CTGAGAGGGCAGTGTGAGGAGATGGAGGAAGAGGTGGGTAGGATGAAGGA
GGAGGGGGTCGGAAGAGCAGCGGCAGCAGCTGCAGCAGCTGTAGAAGGAA
AAGAGAAGGCATTGGCGCGCGTGCAGCTCTTGCTACAGCAAGAGAAGGAG
TGGGAGGAGCAGGTGCTGAGATTAAAGGGGGAAAAGGATCGGTTGGAGGA
ATACGCCAAAAAGACGTTAAGGACGGTACAGGAGAAATATGTGCAGACGT
TGGGGGATTTGAAAGGGAGCAACACTGAGTATAAAGCCAGAAATCAGGCG
TTGGAAGCACGGTTATTGGAAGACAGGCAAGCGCAGAAGAGGGAGGAGAA
GCTGCTGATGTCGTGTGTGTATGGGATTGGCATGGAGATGCTGCAGTCTG
AAAGGAGGGAGGGAGGGAGGAAGGGTTGAGGAGGGAGAAAGGAGACAAAT
TTGCATGTGCTGTACGTATGTGTGTGTGAGGCTTACTGTGAGTATTTGAG
TGGAGGAAGGGGATGAGAGAAGGAGGGAGGAAGAAAAGAAAGATCAGAAG
AAAAACGGACAAAGCTAGACACTGCCTTGGAGATTTGAAAATATAAAAGT
AAGTGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGTGAGTGTGTGCGAGA
GAGAAAGAAAGAGAGAGAGAGAATGCATGCGAGTGTGCATAACAGGGGAA
AAATCCATAAGAGCAAGAAAGTAAGAACGACAATTGCAGAAGATAGCCTC
GGAAGATTTCACCCTTGTAACATTTTTGGTGTCCTGTTGCCAAGCTTCAA
GCAAACAAACACTGGGGCGGTTTGCCACCGCCTTATTAGTTATTATCTTC
GACGCAGCGAACGCTATAAATCCCCAAGCGTATATTTCATCACCAGCAGC
ATCATCATTCCCCGTATCGCATGCAAGTGTTGTCACACTGTGAACTTCCA
CACAAAGTGTGAGTTAGTCCCCCGGTAGAAACCCTTTGATATGCGCAGCA
GCTGGATGGTGGCGGCACTTTGGAAGCTTCGGTTGGATGCTGGCTGCAAG
CTCTTGAGCGTGTCATCCATTTCGTCTTTCTGTATGATGGATGCGAGACG
TGATACGGTGAATTGTGGGAAGTGG

protein sequence of NO01G01520.1

>NO01G01520.1-protein ID=NO01G01520.1-protein|Name=NO01G01520.1|organism=Nannochloropsis oceanica|type=polypeptide|length=730bp
MITKEEEDTTATAEALVQWINSFGPLPPGATSPSSAPPPLIKLEQLTDGL
VLADVLHDIAPTRFPRDLLARPLSSSAASTPTTPTANWALALTNLKKLMR
LLEAHYEEELGLHLHGGRGGNSYFASLDLAGIAREKRNKDIIRLVELVVL
AAVRAPAPEKARAYIERIMGLSPEAQAFLKESVEKTLQRATSFVSSTSPS
SSLSSSFLDTISSATSSSFSSSLPSSFPCTTTAASTALAADQQRENAHLH
ETIQELQLRLAKAEEEVLVVKEEARGWKGEVEGQRHRLTAAVARAEEAQK
ASEKWRVRLEAKELEGEHWRQEARRWEDRVKGERERADRAEEGRRRLADE
VDVLREKADAAHDLEQILEKYKLRLEQAAMAKQHYRDLEEQNAKYLDQVL
ALEAEAKASVPSLKRAIEQYKDQVVGLERDRYQAMERREVMEGELERAKE
EVEGAREARRFLMEECQELKRVVQQLHLQQEQPQGSQEGQPQLPGGGRSG
EEERDEGGLALFEDAWDNKEKLLRLERENRMLRKQVEDGGWPRVGEGEDL
LLLKSQMQDLRRVKEEREAEAIAAKKRTAELEGNVAMLRGQCEEMEEEVG
RMKEEGVGRAAAAAAAAVEGKEKALARVQLLLQQEKEWEEQVLRLKGEKD
RLEEYAKKTLRTVQEKYVQTLGDLKGSNTEYKARNQALEARLLEDRQAQK
REEKLLMSCVYGIGMEMLQSERREGGRKG*

mRNA from alignment at chr1:384839..388860-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO01G01520.1 ID=NO01G01520.1|Name=NO01G01520.1|organism=Nannochloropsis oceanica|type=mRNA|length=4022bp|location=Sequence derived from alignment at chr1:384839..388860- (Nannochloropsis oceanica)
TCGTAGTTTTTGTAGTTGGTCTGTGATGGGTGTGCGTAGGTTAGGGCGAG
GGGGGAGTTGTGTCTCATAAGCAAAAATGGCATGAGAGATGATACGGCGC
AGGTAAAGCACGCCGTCGAAGCGTCGTTCCAACACCTCTCAGGGGTGTGC
TGTGGCACTGGAAGGGCGTGAGGTGGTGGAGCCGTCTCAAGCTCTGTCGC
TTCTTGTGCTTGAGGTCCCATTTGAAGAGGCTTGTTCCACTTCTTCCATT
CCCCCGCCGCCCCCCGCGCTTGACACTAGACCAAAAGGGACGAAAGGCGG
GGGGCGTGACCTACCAAGAATGAACTGAACACGAGCTTTAGAGTCTGAAA
GGAAGGCATAGGCACGCACTTAGACGTGGAGACCGTGCCTGCAAATGCGG
CCACCTCAGCTTTTGGTATCGGGATGGGGATCGTTGCCATCGCTGAAGCG
ACGATGCCGTTGCGGCAACAAGGTGTGGGTGGCTCCGCTTTATGAGATTC
CACACCCACAAGGCCACAAACAGCCCCCTCTGACGGCAGTGTGACAGTCC
CCTAGCTCACCCGTTGATATAGTCGTAGAATGAAGAGCGGATTGCCGAGA
GTTGGTTGAATGATTGCCTGCTCTCCTCCAATGACGCTTTTTGTTGATGC
CTCTGGTGCATGGGCCCTGGTTGCTCACTTCCACACTTCCACTTCACGTC
TTACTCGCCACGCCCCAGTTCTCACGAGCCAATTAGCTACAGGAACGAAA
TTAAGAGCAACCTTGCACCTTCTCACTTCGCATGTAGTCGGAGCTCTTCC
TGGTTCCATCATGCATCCTCCCAATATTTGCATTATCCACTCCGCACAAC
CACCTCACCCCCACACTCTCACACGACCAAAGTACTCCAATGATTACAAA
GGAAGAAGAAGACACCACTGCGACAGCCGAGGCCTTAGTGCAGTGGATCA
ATTCCTTCGGCCCCCTCCCTCCCGGTGCCACCTCTCCTTCTTCCGCCCCT
CCTCCCCTCATAAAGCTCGAGCAACTTACTGACGGCCTCGTGTTGGCCGA
CGTCCTCCATGACATTGCCCCCACCCGCTTCCCACGAGACCTGCTCGCGC
GCCCTCTTTCCTCCTCGGCTGCCTCAACCCCGACCACGCCCACGGCGAAT
TGGGCCTTAGCATTGACAAATCTCAAGAAATTAATGCGCCTCCTCGAGGC
ACATTACGAAGAAGAACTCGGTCTACACCTTCACGGCGGACGAGGCGGCA
ACAGCTACTTTGCCTCGCTAGATCTTGCGGGAATCGCCCGGGAAAAACGC
AATAAGGATATTATCAGGCTTGTGGAGTTGGTTGTCTTGGCAGCAGTCCG
GGCGCCAGCCCCCGAAAAAGCACGGGCGTACATCGAGAGAATAATGGGCC
TGTCCCCCGAGGCACAAGCCTTTTTGAAAGAGAGTGTGGAGAAGACTCTG
CAACGTGCTACTTCATTCGTCTCCTCGACTTCCCCCTCCTCCTCCTTGTC
CTCGTCCTTTCTGGATACCATCTCTAGTGCAACTTCATCCTCCTTCTCTT
CCTCCCTCCCTTCCTCGTTCCCCTGTACCACCACTGCTGCATCCACAGCC
CTGGCGGCCGATCAACAAAGGGAGAACGCGCATTTGCATGAAACCATCCA
GGAGCTACAATTACGTTTAGCCAAGGCTGAGGAGGAAGTACTGGTCGTAA
AGGAGGAAGCGAGGGGGTGGAAGGGAGAAGTGGAGGGGCAACGCCACCGC
TTGACAGCAGCTGTAGCTCGAGCAGAGGAAGCACAGAAGGCGAGCGAGAA
ATGGAGGGTGAGACTGGAGGCGAAAGAGCTAGAAGGAGAGCATTGGAGAC
AGGAAGCAAGGAGGTGGGAGGACCGGGTGAAGGGGGAGAGGGAGAGAGCG
GATAGAGCGGAGGAGGGGAGGAGGAGGCTGGCGGATGAGGTGGATGTGTT
GCGGGAGAAAGGTGAGGAGGGAGGAAGGGAAGGAGGAAGGGAGGTAGGCA
GGGAGGAAAGAAAGGAAGGAAAAAATGAGGGAATGATTTATCTTTTTATC
CTATCAAGCCTCATGCGATGGGGCTAAAGAGAGGCGTTGCAATATGTCTT
ACCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTC
TACCACAGCGGACGCCGCCCATGACTTGGAGCAGATCCTTGAGAAATACA
AACTCCGACTCGAACAGGCTGCTATGGCCAAGCAGCACTACCGCGATCTA
GAGGAGCAAAACGCCAAATACCTGGATCAGGTGCTGGCGTTGGAGGCAGA
GGCAAAAGCGAGTGTCCCGAGCCTCAAGAGAGCGATCGAGCAGTACAAGG
ATCAAGTAGTCGGGCTGGAGAGGGACCGTTACCAGGCCATGGAACGGAGG
GAGGTCATGGAGGGGGAGTTGGAGAGGGCGAAGGAGGAGGTGGAGGGCGC
GAGGGAGGCACGGCGGTTCCTGATGGAGGAATGTCAGGAATTGAAACGGG
TCGTGCAGCAGCTACATCTGCAGCAGGAGCAGCCGCAGGGATCGCAGGAG
GGACAGCCGCAATTACCGGGCGGAGGAAGGTCAGGAGAGGAGGAAAGGGA
TGAAGGAGGTTTGGCTTTGTTTGAGGATGCCTGGGACAATAAAGAGAAAT
TGCTGCGGCTGGAGCGAGAGAATAGGATGTTACGAAAACAGGTGGAGGAC
GGGGGCTGGCCGAGGGTAGGGGAGGGAGAGGACCTCTTGCTGCTGAAATC
GCAAATGCAGGATCTACGGAGGGTGAAGGAGGAGAGGGAGGCTGAGGCAA
TAGCGGCTAAGAAGAGAACAGCCGAATTGGAGGGGAACGTGGCTATGCTG
AGAGGGCAGTGTGAGGAGATGGAGGAAGAGGTGGGTAGGATGAAGGAGGA
GGGGGTCGGAAGAGCAGCGGCAGCAGCTGCAGCAGCTGTAGAAGGAAAAG
AGAAGGCATTGGCGCGCGTGCAGCTCTTGCTACAGCAAGAGAAGGAGTGG
GAGGAGCAGGTGCTGAGATTAAAGGGGGAAAAGGATCGGTTGGAGGAATA
CGCCAAAAAGACGTTAAGGACGGTACAGGAGAAATATGTGCAGACGTTGG
GGGATTTGAAAGGGAGCAACACTGAGTATAAAGCCAGAAATCAGGCGTTG
GAAGCACGGTTATTGGAAGACAGGCAAGCGCAGAAGAGGGAGGAGAAGCT
GCTGATGTCGTGTGTGTATGGGATTGGCATGGAGATGCTGCAGTCTGAAA
GGAGGGAGGGAGGGAGGAAGGGTTGAGGAGGGAGAAAGGAGACAAATTTG
CATGTGCTGTACGTATGTGTGTGTGAGGCTTACTGTGAGTATTTGAGTGG
AGGAAGGGGATGAGAGAAGGAGGGAGGAAGAAAAGAAAGATCAGAAGAAA
AACGGACAAAGCTAGACACTGCCTTGGAGATTTGAAAATATAAAAGTAAG
TGTGTGTGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGTGAGTGTGTGCGAGAGAG
AAAGAAAGAGAGAGAGAGAATGCATGCGAGTGTGCATAACAGGGGAAAAA
TCCATAAGAGCAAGAAAGTAAGAACGACAATTGCAGAAGATAGCCTCGGA
AGATTTCACCCTTGTAACATTTTTGGTGTCCTGTTGCCAAGCTTCAAGCA
AACAAACACTGGGGCGGTTTGCCACCGCCTTATTAGTTATTATCTTCGAC
GCAGCGAACGCTATAAATCCCCAAGCGTATATTTCATCACCAGCAGCATC
ATCATTCCCCGTATCGCATGCAAGTGTTGTCACACTGTGAACTTCCACAC
AAAGTGTGAGTTAGTCCCCCGGTAGAAACCCTTTGATATGCGCAGCAGCT
GGATGGTGGCGGCACTTTGGAAGCTTCGGTTGGATGCTGGCTGCAAGCTC
TTGAGCGTGTCATCCATTTCGTCTTTCTGTATGATGGATGCGAGACGTGA
TACGGTGAATTGTGGGAAGTGG

Coding sequence (CDS) from alignment at chr1:384839..388860-

>NO01G01520.1 ID=NO01G01520.1|Name=NO01G01520.1|organism=Nannochloropsis oceanica|type=CDS|length=2190bp|location=Sequence derived from alignment at chr1:384839..388860- (Nannochloropsis oceanica)
ATGATTACAAAGGAAGAAGAAGACACCACTGCGACAGCCGAGGCCTTAGT
GCAGTGGATCAATTCCTTCGGCCCCCTCCCTCCCGGTGCCACCTCTCCTT
CTTCCGCCCCTCCTCCCCTCATAAAGCTCGAGCAACTTACTGACGGCCTC
GTGTTGGCCGACGTCCTCCATGACATTGCCCCCACCCGCTTCCCACGAGA
CCTGCTCGCGCGCCCTCTTTCCTCCTCGGCTGCCTCAACCCCGACCACGC
CCACGGCGAATTGGGCCTTAGCATTGACAAATCTCAAGAAATTAATGCGC
CTCCTCGAGGCACATTACGAAGAAGAACTCGGTCTACACCTTCACGGCGG
ACGAGGCGGCAACAGCTACTTTGCCTCGCTAGATCTTGCGGGAATCGCCC
GGGAAAAACGCAATAAGGATATTATCAGGCTTGTGGAGTTGGTTGTCTTG
GCAGCAGTCCGGGCGCCAGCCCCCGAAAAAGCACGGGCGTACATCGAGAG
AATAATGGGCCTGTCCCCCGAGGCACAAGCCTTTTTGAAAGAGAGTGTGG
AGAAGACTCTGCAACGTGCTACTTCATTCGTCTCCTCGACTTCCCCCTCC
TCCTCCTTGTCCTCGTCCTTTCTGGATACCATCTCTAGTGCAACTTCATC
CTCCTTCTCTTCCTCCCTCCCTTCCTCGTTCCCCTGTACCACCACTGCTG
CATCCACAGCCCTGGCGGCCGATCAACAAAGGGAGAACGCGCATTTGCAT
GAAACCATCCAGGAGCTACAATTACGTTTAGCCAAGGCTGAGGAGGAAGT
ACTGGTCGTAAAGGAGGAAGCGAGGGGGTGGAAGGGAGAAGTGGAGGGGC
AACGCCACCGCTTGACAGCAGCTGTAGCTCGAGCAGAGGAAGCACAGAAG
GCGAGCGAGAAATGGAGGGTGAGACTGGAGGCGAAAGAGCTAGAAGGAGA
GCATTGGAGACAGGAAGCAAGGAGGTGGGAGGACCGGGTGAAGGGGGAGA
GGGAGAGAGCGGATAGAGCGGAGGAGGGGAGGAGGAGGCTGGCGGATGAG
GTGGATGTGTTGCGGGAGAAAGCGGACGCCGCCCATGACTTGGAGCAGAT
CCTTGAGAAATACAAACTCCGACTCGAACAGGCTGCTATGGCCAAGCAGC
ACTACCGCGATCTAGAGGAGCAAAACGCCAAATACCTGGATCAGGTGCTG
GCGTTGGAGGCAGAGGCAAAAGCGAGTGTCCCGAGCCTCAAGAGAGCGAT
CGAGCAGTACAAGGATCAAGTAGTCGGGCTGGAGAGGGACCGTTACCAGG
CCATGGAACGGAGGGAGGTCATGGAGGGGGAGTTGGAGAGGGCGAAGGAG
GAGGTGGAGGGCGCGAGGGAGGCACGGCGGTTCCTGATGGAGGAATGTCA
GGAATTGAAACGGGTCGTGCAGCAGCTACATCTGCAGCAGGAGCAGCCGC
AGGGATCGCAGGAGGGACAGCCGCAATTACCGGGCGGAGGAAGGTCAGGA
GAGGAGGAAAGGGATGAAGGAGGTTTGGCTTTGTTTGAGGATGCCTGGGA
CAATAAAGAGAAATTGCTGCGGCTGGAGCGAGAGAATAGGATGTTACGAA
AACAGGTGGAGGACGGGGGCTGGCCGAGGGTAGGGGAGGGAGAGGACCTC
TTGCTGCTGAAATCGCAAATGCAGGATCTACGGAGGGTGAAGGAGGAGAG
GGAGGCTGAGGCAATAGCGGCTAAGAAGAGAACAGCCGAATTGGAGGGGA
ACGTGGCTATGCTGAGAGGGCAGTGTGAGGAGATGGAGGAAGAGGTGGGT
AGGATGAAGGAGGAGGGGGTCGGAAGAGCAGCGGCAGCAGCTGCAGCAGC
TGTAGAAGGAAAAGAGAAGGCATTGGCGCGCGTGCAGCTCTTGCTACAGC
AAGAGAAGGAGTGGGAGGAGCAGGTGCTGAGATTAAAGGGGGAAAAGGAT
CGGTTGGAGGAATACGCCAAAAAGACGTTAAGGACGGTACAGGAGAAATA
TGTGCAGACGTTGGGGGATTTGAAAGGGAGCAACACTGAGTATAAAGCCA
GAAATCAGGCGTTGGAAGCACGGTTATTGGAAGACAGGCAAGCGCAGAAG
AGGGAGGAGAAGCTGCTGATGTCGTGTGTGTATGGGATTGGCATGGAGAT
GCTGCAGTCTGAAAGGAGGGAGGGAGGGAGGAAGGGTTGA

Synonyms

Publications