NO01G01430.1, NO01G01430.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO01G01430.1
Unique NameNO01G01430.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length2404
Alignment locationchr1:365999..368402 +

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:365999..368402 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO01G01430.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G01430NO01G01430Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO01G01430.1NO01G01430.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO01G01430.1.cds1NO01G01430.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO01G01430.1 ID=NO01G01430.1|Name=NO01G01430.1|organism=Nannochloropsis oceanica|type=mRNA|length=2404bp
TCAAATGACTTGGCCGCCAAGACGTCTCTATGCAGGATAAGATATGGTAT
CTTGATGCTTCTTGGTCCTCTTGGTGTATATTGTAATTCGATAAAAATCC
TGAGGCTGGAGGATCGTTCTTTATATTGCGTGTGTTAGTTCGTGAGTTCC
TTCTGACACTTTGCTTTCTACTTGAATTGCGAAAGGTTGCTAGCTCCACC
GCGCGTTCTGTGTTTGAGACGCACTATGCTTTTACTTCCCATCTCTGTTC
TCTGTAAGCACACAGAGATAACATCATGCGCTTTTCTTTGATAGATGTAC
CAACTATTGAGCCCCTTCTTTGTCACTTTATCTCGAGACAGGCGGCGTTG
TTCACCCTTGGAAGCAGTTCTTATCCAGTAGATCATGCACAGCGTCCTCC
TTCCCCAGGGCGCTTCAACCACCACCACCACCACGGCCTCATCTCGACCC
AAGCGTATGTCTTCTTCCTTGCTGTTGCAGCCTTCGTCCTTGTCACGGTC
ATGCTGCTCGCCTGTTGCCACACAGCTACCAGACAGCCTGCTCCTACATA
TTTTTGGATTTCTCGAGGTACCTGCCTTGGTCGCCCTGTTGGCTACAGAC
CGTCATTGGCGGACCCTCGCAAGGAGTCGCTCATTATGGAAACCTGCGTG
CCAGTCCGAGTGGCCTGGCTTGATGCAACAGCTCGAAGGCTGTCTTGACG
TGCAACCCGATGCGTACCGTTGCTTCTTCTTTAAGAACCGGCGCTCCGCT
TTCGAAGCACGCTTTGAGCGGGCCATCAGCAGCCGCCCTTCGACCGTCAG
CAGCAGCGCTAAATCCAGTAGCAGAGAAAGCGAGACGGCAGCAGCAGCGG
CGGCAGCAGCGGCAGCCGCAAAGGCAGCGAATGCAGCAGCCGAGGCGAGG
CGACGATACCTGGCGCACTTCTTCGAAGAGATAATTTTGTTTGTCGACAT
CCGTCATGCCGTCACGGGCAAGTCTCTCATTTCCATGGCTGTACCTTTGA
CCTTGGCCAATGTTCGCAAACTCTTCAAGGCAGACATGCGCTTGTCGGGG
CATTACGACGGAATAGATGTGCAGGAGACGTTTTTGGTGCCGGGAGTAGA
ATTGGATCTCGATGACAATGAGGCGCAGGCCTTTATGGCAGCAGTAACGG
AGGGAGAGCAGAATGAGAATATGGAAGAGGGGGTTAGTAATGCCAGATTT
GGTGCCATCGCGGGGTTAAGGTTTGAATTCTCGCTTTTTCACCGAAAGGC
TAAGACCATGGCACTGTTGGGTCAGGGGCAGGCGGATTTGGATAGGCGCT
TGAATGGGTACGGACCTCGGTTTGTAGCTGCTGATGATGAAACAGAAGCG
GCCAATAATCAGACGAAGGTGCAAGAAGGACGATTTTTTGGAGAGGGTGC
TGAGTTCTTGTGCGCTGTTCCCCTTTTTGCCTGGATTTTTGCCTCGTCAT
CCTCTTCGATGTCGGCGGTGGTTAAAGGCGGAGAGGGAGAGGCTGCAAGG
AGGAGTCGACATCGTGTGACATTGGATGCTTTAGCAATTGAAGTACATTA
TGTCGATACGGCTGATACGTCGGTGCGGCCCCAGGATGAGCTCTTGGAAT
GCTTGTATCAGATCGTAAAGAAGGAGTTAGTGTGGGTGTAAGAGGGACAA
ATGTGTGAATACATTGAGAATGCTGGACGATGGAGAAGAGGAAGATGAAT
GTGGCGGAGATGAAAACGATATTTCTATTACCTTTATTCAATCATGTATG
ATGCATATTTAATTCTGCGGATAAATTCGTATTGGCGAGTGGGTGGGCGG
AGATGTACGAGCAAAGAAGGGCAGCTATGGCAGCATCAAGCATCAAGAAC
CATTCCTACTCTTAACCGAGAAAAGTTTTAGAAGAACAGATAAAGAAGCA
ACACAAATTTTGCACATGTATAGTGATCTGCTTCTTTTTCCTTCCCTTGT
GTCAAGAATCAAACATACATGCTTGGTTCTTGTCTTCTGCTTTTGGTTCT
CGATCTTCTGCGCTGTACTTCTCAATTAGTACAGCACCACACACTCCAAC
CCTGAAACAGCATACACTGCTCCCTCCCCTTTCAATGTATCCATGATGCG
CGCTCAGGTCATCGCAAGGGGGGGGGATTAATTTGAAATGAAAGCGAGGG
GATTTTGGAAATGGAAAGAGGAGGATGGATGCGACGGACAAGAGAATGTA
TGTATATGTATGTTGACTAATACATATATACAGTATATACATAGACATTA
TGAATCGCAATTTTCGATGTTGTATTTATTGTTATTATTCTATTTCTCGT
CGACTCCTTCGATCTTAACAATTTGCAACTCCTCCTCTCTTCACCACTTC
CTACCATCCACTTCGATTCTCTTTTACAACTCCGCCCTGCTTCATCGCTC
TCAC
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protein sequence of NO01G01430.1

>NO01G01430.1-protein ID=NO01G01430.1-protein|Name=NO01G01430.1|organism=Nannochloropsis oceanica|type=polypeptide|length=419bp
MHSVLLPQGASTTTTTTASSRPKRMSSSLLLQPSSLSRSCCSPVATQLPD
SLLLHIFGFLEVPALVALLATDRHWRTLARSRSLWKPACQSEWPGLMQQL
EGCLDVQPDAYRCFFFKNRRSAFEARFERAISSRPSTVSSSAKSSSRESE
TAAAAAAAAAAAKAANAAAEARRRYLAHFFEEIILFVDIRHAVTGKSLIS
MAVPLTLANVRKLFKADMRLSGHYDGIDVQETFLVPGVELDLDDNEAQAF
MAAVTEGEQNENMEEGVSNARFGAIAGLRFEFSLFHRKAKTMALLGQGQA
DLDRRLNGYGPRFVAADDETEAANNQTKVQEGRFFGEGAEFLCAVPLFAW
IFASSSSSMSAVVKGGEGEAARRSRHRVTLDALAIEVHYVDTADTSVRPQ
DELLECLYQIVKKELVWV*
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mRNA from alignment at chr1:365999..368402+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO01G01430.1 ID=NO01G01430.1|Name=NO01G01430.1|organism=Nannochloropsis oceanica|type=mRNA|length=2404bp|location=Sequence derived from alignment at chr1:365999..368402+ (Nannochloropsis oceanica)
TCAAATGACTTGGCCGCCAAGACGTCTCTATGCAGGATAAGATATGGTAT CTTGATGCTTCTTGGTCCTCTTGGTGTATATTGTAATTCGATAAAAATCC TGAGGCTGGAGGATCGTTCTTTATATTGCGTGTGTTAGTTCGTGAGTTCC TTCTGACACTTTGCTTTCTACTTGAATTGCGAAAGGTTGCTAGCTCCACC GCGCGTTCTGTGTTTGAGACGCACTATGCTTTTACTTCCCATCTCTGTTC TCTGTAAGCACACAGAGATAACATCATGCGCTTTTCTTTGATAGATGTAC CAACTATTGAGCCCCTTCTTTGTCACTTTATCTCGAGACAGGCGGCGTTG TTCACCCTTGGAAGCAGTTCTTATCCAGTAGATCATGCACAGCGTCCTCC TTCCCCAGGGCGCTTCAACCACCACCACCACCACGGCCTCATCTCGACCC AAGCGTATGTCTTCTTCCTTGCTGTTGCAGCCTTCGTCCTTGTCACGGTC ATGCTGCTCGCCTGTTGCCACACAGCTACCAGACAGCCTGCTCCTACATA TTTTTGGATTTCTCGAGGTACCTGCCTTGGTCGCCCTGTTGGCTACAGAC CGTCATTGGCGGACCCTCGCAAGGAGTCGCTCATTATGGAAACCTGCGTG CCAGTCCGAGTGGCCTGGCTTGATGCAACAGCTCGAAGGCTGTCTTGACG TGCAACCCGATGCGTACCGTTGCTTCTTCTTTAAGAACCGGCGCTCCGCT TTCGAAGCACGCTTTGAGCGGGCCATCAGCAGCCGCCCTTCGACCGTCAG CAGCAGCGCTAAATCCAGTAGCAGAGAAAGCGAGACGGCAGCAGCAGCGG CGGCAGCAGCGGCAGCCGCAAAGGCAGCGAATGCAGCAGCCGAGGCGAGG CGACGATACCTGGCGCACTTCTTCGAAGAGATAATTTTGTTTGTCGACAT CCGTCATGCCGTCACGGGCAAGTCTCTCATTTCCATGGCTGTACCTTTGA CCTTGGCCAATGTTCGCAAACTCTTCAAGGCAGACATGCGCTTGTCGGGG CATTACGACGGAATAGATGTGCAGGAGACGTTTTTGGTGCCGGGAGTAGA ATTGGATCTCGATGACAATGAGGCGCAGGCCTTTATGGCAGCAGTAACGG AGGGAGAGCAGAATGAGAATATGGAAGAGGGGGTTAGTAATGCCAGATTT GGTGCCATCGCGGGGTTAAGGTTTGAATTCTCGCTTTTTCACCGAAAGGC TAAGACCATGGCACTGTTGGGTCAGGGGCAGGCGGATTTGGATAGGCGCT TGAATGGGTACGGACCTCGGTTTGTAGCTGCTGATGATGAAACAGAAGCG GCCAATAATCAGACGAAGGTGCAAGAAGGACGATTTTTTGGAGAGGGTGC TGAGTTCTTGTGCGCTGTTCCCCTTTTTGCCTGGATTTTTGCCTCGTCAT CCTCTTCGATGTCGGCGGTGGTTAAAGGCGGAGAGGGAGAGGCTGCAAGG AGGAGTCGACATCGTGTGACATTGGATGCTTTAGCAATTGAAGTACATTA TGTCGATACGGCTGATACGTCGGTGCGGCCCCAGGATGAGCTCTTGGAAT GCTTGTATCAGATCGTAAAGAAGGAGTTAGTGTGGGTGTAAGAGGGACAA ATGTGTGAATACATTGAGAATGCTGGACGATGGAGAAGAGGAAGATGAAT GTGGCGGAGATGAAAACGATATTTCTATTACCTTTATTCAATCATGTATG ATGCATATTTAATTCTGCGGATAAATTCGTATTGGCGAGTGGGTGGGCGG AGATGTACGAGCAAAGAAGGGCAGCTATGGCAGCATCAAGCATCAAGAAC CATTCCTACTCTTAACCGAGAAAAGTTTTAGAAGAACAGATAAAGAAGCA ACACAAATTTTGCACATGTATAGTGATCTGCTTCTTTTTCCTTCCCTTGT GTCAAGAATCAAACATACATGCTTGGTTCTTGTCTTCTGCTTTTGGTTCT CGATCTTCTGCGCTGTACTTCTCAATTAGTACAGCACCACACACTCCAAC CCTGAAACAGCATACACTGCTCCCTCCCCTTTCAATGTATCCATGATGCG CGCTCAGGTCATCGCAAGGGGGGGGGATTAATTTGAAATGAAAGCGAGGG GATTTTGGAAATGGAAAGAGGAGGATGGATGCGACGGACAAGAGAATGTA TGTATATGTATGTTGACTAATACATATATACAGTATATACATAGACATTA TGAATCGCAATTTTCGATGTTGTATTTATTGTTATTATTCTATTTCTCGT CGACTCCTTCGATCTTAACAATTTGCAACTCCTCCTCTCTTCACCACTTC CTACCATCCACTTCGATTCTCTTTTACAACTCCGCCCTGCTTCATCGCTC TCAC
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Coding sequence (CDS) from alignment at chr1:365999..368402+

>NO01G01430.1 ID=NO01G01430.1|Name=NO01G01430.1|organism=Nannochloropsis oceanica|type=CDS|length=1257bp|location=Sequence derived from alignment at chr1:365999..368402+ (Nannochloropsis oceanica)
ATGCACAGCGTCCTCCTTCCCCAGGGCGCTTCAACCACCACCACCACCAC
GGCCTCATCTCGACCCAAGCGTATGTCTTCTTCCTTGCTGTTGCAGCCTT
CGTCCTTGTCACGGTCATGCTGCTCGCCTGTTGCCACACAGCTACCAGAC
AGCCTGCTCCTACATATTTTTGGATTTCTCGAGGTACCTGCCTTGGTCGC
CCTGTTGGCTACAGACCGTCATTGGCGGACCCTCGCAAGGAGTCGCTCAT
TATGGAAACCTGCGTGCCAGTCCGAGTGGCCTGGCTTGATGCAACAGCTC
GAAGGCTGTCTTGACGTGCAACCCGATGCGTACCGTTGCTTCTTCTTTAA
GAACCGGCGCTCCGCTTTCGAAGCACGCTTTGAGCGGGCCATCAGCAGCC
GCCCTTCGACCGTCAGCAGCAGCGCTAAATCCAGTAGCAGAGAAAGCGAG
ACGGCAGCAGCAGCGGCGGCAGCAGCGGCAGCCGCAAAGGCAGCGAATGC
AGCAGCCGAGGCGAGGCGACGATACCTGGCGCACTTCTTCGAAGAGATAA
TTTTGTTTGTCGACATCCGTCATGCCGTCACGGGCAAGTCTCTCATTTCC
ATGGCTGTACCTTTGACCTTGGCCAATGTTCGCAAACTCTTCAAGGCAGA
CATGCGCTTGTCGGGGCATTACGACGGAATAGATGTGCAGGAGACGTTTT
TGGTGCCGGGAGTAGAATTGGATCTCGATGACAATGAGGCGCAGGCCTTT
ATGGCAGCAGTAACGGAGGGAGAGCAGAATGAGAATATGGAAGAGGGGGT
TAGTAATGCCAGATTTGGTGCCATCGCGGGGTTAAGGTTTGAATTCTCGC
TTTTTCACCGAAAGGCTAAGACCATGGCACTGTTGGGTCAGGGGCAGGCG
GATTTGGATAGGCGCTTGAATGGGTACGGACCTCGGTTTGTAGCTGCTGA
TGATGAAACAGAAGCGGCCAATAATCAGACGAAGGTGCAAGAAGGACGAT
TTTTTGGAGAGGGTGCTGAGTTCTTGTGCGCTGTTCCCCTTTTTGCCTGG
ATTTTTGCCTCGTCATCCTCTTCGATGTCGGCGGTGGTTAAAGGCGGAGA
GGGAGAGGCTGCAAGGAGGAGTCGACATCGTGTGACATTGGATGCTTTAG
CAATTGAAGTACATTATGTCGATACGGCTGATACGTCGGTGCGGCCCCAG
GATGAGCTCTTGGAATGCTTGTATCAGATCGTAAAGAAGGAGTTAGTGTG
GGTGTAA
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Synonyms
Publications