NO01G00330.1, NO01G00330.1 (mRNA) Nannochloropsis oceanica

Overview
NameNO01G00330.1
Unique NameNO01G00330.1
TypemRNA
OrganismNannochloropsis oceanica (N. oceanica IMET1)
Sequence length1300
Alignment locationchr1:67868..70247 -

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Properties
Mutants
Expression
No biomaterial libraries express this feature.
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
chr1genomechr1:67868..70247 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gene prediction for N. oceanica IMET12017-10-24
Homology annotation for N. oceanica IMET12017-10-25
InterPro analysis for N. oceanica IMET12017-10-25
Annotated Terms
Homology
The following BLAST results are available for this feature:
BLAST of NO01G00330.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 0
Match NameE-valueIdentityDescription
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NO01G00330NO01G00330Nannochloropsis oceanica (N. oceanica IMET1)gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
NO01G00330.1NO01G00330.1-proteinNannochloropsis oceanica (N. oceanica IMET1)polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
NO01G00330.1.cds1NO01G00330.1.cds1Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G00330.1.cds2NO01G00330.1.cds2Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G00330.1.cds3NO01G00330.1.cds3Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G00330.1.cds4NO01G00330.1.cds4Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G00330.1.cds5NO01G00330.1.cds5Nannochloropsis oceanica (N. oceanica IMET1)CDS
NO01G00330.1.cds6NO01G00330.1.cds6Nannochloropsis oceanica (N. oceanica IMET1)CDS


Sequences
The following sequences are available for this feature:

mRNA sequence

>NO01G00330.1 ID=NO01G00330.1|Name=NO01G00330.1|organism=Nannochloropsis oceanica|type=mRNA|length=1300bp
GAGTGCTGGCGAGAAAACTTGAGACATTATCACCACAAAACTTCACGCAT
ACACCCACGCATAGGGGGAATTTACGAAATCTACAGCGTAAGCCGCCTCT
ACTTCCCTATCCCACCACTATGACGATGATGGTCCTCGATTCCTGGTCAC
GCAAGCGCAAGTCCATCGCCACCGCCCCTGCCATTGCCCCCTCGGTCTCC
TCTCCCTCGGCCTCGGTCGACAGTTTGATTGGCGATAACGAGGACCAGCA
ACAGCGCTTCGTGCTGACACCAATCTCCCTGGACACACGCGTCGAACCAC
GCACCCAAAAGCCTGCCTGTCCTGTCGTCCTCCCACTTGACGGCGAGCTC
CGTTTGACGAAGACGGACATTTCCAAGGTGTTTGTCATCGATAAGGACCG
CTTGGAGTTCATCTCGCGGGAGCACCTTTGCTTCACCACCACAAGCGTCC
TCCCTCCCTCCTTTCCTCCCTCCATCCCTCCCTCCCTCCCGCCCGCCCGG
CCGGCCAAGAAGTTCAGGACCGCCTCGAGCAGCAACCCTTCCTCTCTCCC
GCCCTCCCCTCGTGTGGAGAGGGAGAATGAGGGGGAGGAGGAAGGGAGCG
AGGAAGGGACGGAGGTAGAGGAGGAGGGGATGCGGTCCACAGTCCGTGTC
CTCGTCCGCAGCCTTGCCACCAACCAGGTGTCCATCCGTCGTTCAGTGTA
CGCGGAATGGGCCTCAGGAGGTAGGGAGGAGGCTTACGGCCTAGTGCTGA
TGAAGAAGGGGGATGAGACGGAGCTCTTCCCAGGGGACCATCTGCAGCTC
CTCAACCCTCCGTTTGACCGGCTCGGGTGCCACTCGCTCACCTTGCAGCT
GGCCGCCGCCCCTCCCCCCTCACCCCCTTCCTCCCTCCCTTCCTCCCTCC
CTTCCTCCCTCGGCTCCTCCCACAACAATTCCAACGCCCGCCGCGCCACC
TTGACTGCAGCGGCTCCTGTTCCTGCTCCTGCTGTTGCAACCGCTGCTGC
TGCTGTCCGTCCCTCCCTCCATTCCTCCCTGCTCTCCCCTCCCCCCCTCA
GCCTCGAAGCGACTTTTGCATCGCCGGCTTGTGTCACGGGCGCAGCAAGG
GAGGGAGGGACGATGGCCCTCCCGCACCTGGACAGGGGGAAAGGGAGTGG
GGAGGAGGAGGAGGGAGGGAGAGAGGGAACGACGGGAAGGGGGGGGGCAT
TCGCAGGGTGCTCGGCGGATTATTTTCGCCGTGGTCCCTCTTGATGGCGG
GAAGGAAGAAGGGAAAGGGCGGGCGGGAGGAAGGGAGGAAGGGAGAGGGG
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protein sequence of NO01G00330.1

>NO01G00330.1-protein ID=NO01G00330.1-protein|Name=NO01G00330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=375bp
MTMMVLDSWSRKRKSIATAPAIAPSVSSPSASVDSLIGDNEDQQQRFVLT
PISLDTRVEPRTQKPACPVVLPLDGELRLTKTDISKVFVIDKDRLEFISR
EHLCFTTTSVLPPSFPPSIPPSLPPARPAKKFRTASSSNPSSLPPSPRVE
RENEGEEEGSEEGTEVEEEGMRSTVRVLVRSLATNQVSIRRSVYAEWASG
GREEAYGLVLMKKGDETELFPGDHLQLLNPPFDRLGCHSLTLQLAAAPPP
SPPSSLPSSLPSSLGSSHNNSNARRATLTAAAPVPAPAVATAAAAVRPSL
HSSLLSPPPLSLEATFASPACVTGAAREGGTMALPHLDRGKGSGEEEEGG
REGTTGRGGAFAGCSADYFRRGPS*
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mRNA from alignment at chr1:67868..70247-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>NO01G00330.1 ID=NO01G00330.1|Name=NO01G00330.1|organism=Nannochloropsis oceanica|type=mRNA|length=2380bp|location=Sequence derived from alignment at chr1:67868..70247- (Nannochloropsis oceanica)
GAGTGCTGGCGAGAAAACTTGAGACATTATCACCACAAAACTTCACGCAT
ACACCCACGCATAGGGGGAATTTACGAAATCTACAGCGTAAGCCGCCTCT
ACTTCCCTATCCCACCACTATGACGATGATGGTCCTCGATTCCTGGTCAC
GCAAGGTTCGTTTGTCGTTGGTGCGGATGCTTTTTCCTCTTCCTCCCTCC
ACCCTCCCTTCCTCCCCCCCATCTCCTTCCCCCTCATCGACCCTCATCCC
CATTAAGCCACCACGAAGTATGAATGTACAGTTCATTGCCTTTGTGAGTG
GAGAATCGTAGGCCTGGTACTCTTGCCAAGCCACGGCTACACTCCGCATT
TTTCACTTGTGCTTGGAGACTTCCTTACCTCCTCGCCTTCCCGGCTGCTG
CCTCATCCCTTTCCCTCTCACTCTGCCAGCGCAAGTCCATCGCCACCGCC
CCTGCCATTGCCCCCTCGGTCTCCTCTCCCTCGGCCTCGGTCGACAGTTT
GATTGGCGATAACGAGGACCAGCAACAGCGCTTCGTGCTGACACCAATCT
CCCTGGTACGTGGACTCCCTTTCGTCTCCCAGTCCCTCCCTCCCTTCCTC
CCTCTCAATCTCCTTCCCTCTCTCTCAATCTCCCTCCCTCCCTCTCAAAT
TTCCCTCCTCCCCACATAACCTTTCCCCCCCTCCCCACTCCTCTCCTTCA
TCCCAACTCCCCCCTCCCCTCCTTCTTATTTCATCATCGTCACCATCCGT
CCACCACAGGACACACGCGTCGAACCACGCACCCAAAAGCCTGCCTGTCC
TGTCGTCCTCCCACTTGACGGCGAGCTCCGTTTGACGAAGACGGACATTT
CCAAGGTAGATATCTCTCCTTCCCTTTCTCCCTCCTTCCCTCTCTCCCTC
TATTTCTCTCTTTCTTCTTTCCCATGCATCCTCACTTCCCTCCCTCCCTC
ATTTCTAATGCGCCTAGATGCCTTATCCTTGCATTCCCATTCTTCCTCTG
GGCTTCATCACACGACCATCGCCATTGCCAATCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCACCAGGTGTTTGTCATCGATAAGGACCGCTTGGA
GTTCATCTCGCGGGAGCACCTTTGCTTCACCACCACAAGCGTCCTCCCTC
CCTCCTTTCCTCCCTCCATCCCTCCCTCCCTCCCGCCCGCCCGGCCGGCC
AAGAAGTTCAGGACCGCCTCGAGCAGCAACCCTTCCTCTCTCCCGCCCTC
CCCTCGTGTGGAGAGGGAGAATGAGGGGGAGGAGGAAGGGAGCGAGGAAG
GGACGGAGGTAGAGGAGGAGGGGATGCGGTCCACAGTCCGTGTCCTCGTC
CGCAGCCTTGCCACCAACCAGGTCAGGGAGTGAGGGAGGGAGAGAGGGAG
GGAGGGAGGGAGTGGGGCTGGGAAGATACAGAGCGTCGATTTAAATATCA
TTGGAAAACACTAAATAGTCGTTTGGGCATGTACTCCCTCCTTCCCTCCC
TTCTTCCCTCCCTCCTCCCGTCCCTCCCCCCCTCCCAGGTGTCCATCCGT
CGTTCAGTGTACGCGGAATGGGCCTCAGGAGGTAGGGAGGAGGCTTACGG
CCTAGTGCTGATGAAGAAGGGGGATGAGACGGAGCTCTTCCCAGGGGACC
ATCTGCAGGTAGGGACGGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGAAGGATACGGACTGGTGCTGAATTGTTTTGGTGGAGTGTCTTGAAGA
GACGCAAGCACACACACACAAACACACACACACTCTCTCTCTCTTTGTCT
CCCTCTCTCTCTTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCCCACACACACAGCTCCTCAACCCTCCGTTTGACCG
GCTCGGGTGCCACTCGCTCACCTTGCAGCTGGCCGCCGCCCCTCCCCCCT
CACCCCCTTCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCGGCTCCTCC
CACAACAATTCCAACGCCCGCCGCGCCACCTTGACTGCAGCGGCTCCTGT
TCCTGCTCCTGCTGTTGCAACCGCTGCTGCTGCTGTCCGTCCCTCCCTCC
ATTCCTCCCTGCTCTCCCCTCCCCCCCTCAGCCTCGAAGCGACTTTTGCA
TCGCCGGCTTGTGTCACGGGCGCAGCAAGGGAGGGAGGGACGATGGCCCT
CCCGCACCTGGACAGGGGGAAAGGGAGTGGGGAGGAGGAGGAGGGAGGGA
GAGAGGGAACGACGGGAAGGGGGGGGGCATTCGCAGGGTGCTCGGCGGAT
TATTTTCGCCGTGGTCCCTCTTGATGGCGGGAAGGAAGAAGGGAAAGGGC
GGGCGGGAGGAAGGGAGGAAGGGAGAGGGG
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Coding sequence (CDS) from alignment at chr1:67868..70247-

>NO01G00330.1 ID=NO01G00330.1|Name=NO01G00330.1|organism=Nannochloropsis oceanica|type=CDS|length=1125bp|location=Sequence derived from alignment at chr1:67868..70247- (Nannochloropsis oceanica)
ATGACGATGATGGTCCTCGATTCCTGGTCACGCAAGCGCAAGTCCATCGC
CACCGCCCCTGCCATTGCCCCCTCGGTCTCCTCTCCCTCGGCCTCGGTCG
ACAGTTTGATTGGCGATAACGAGGACCAGCAACAGCGCTTCGTGCTGACA
CCAATCTCCCTGGACACACGCGTCGAACCACGCACCCAAAAGCCTGCCTG
TCCTGTCGTCCTCCCACTTGACGGCGAGCTCCGTTTGACGAAGACGGACA
TTTCCAAGGTGTTTGTCATCGATAAGGACCGCTTGGAGTTCATCTCGCGG
GAGCACCTTTGCTTCACCACCACAAGCGTCCTCCCTCCCTCCTTTCCTCC
CTCCATCCCTCCCTCCCTCCCGCCCGCCCGGCCGGCCAAGAAGTTCAGGA
CCGCCTCGAGCAGCAACCCTTCCTCTCTCCCGCCCTCCCCTCGTGTGGAG
AGGGAGAATGAGGGGGAGGAGGAAGGGAGCGAGGAAGGGACGGAGGTAGA
GGAGGAGGGGATGCGGTCCACAGTCCGTGTCCTCGTCCGCAGCCTTGCCA
CCAACCAGGTGTCCATCCGTCGTTCAGTGTACGCGGAATGGGCCTCAGGA
GGTAGGGAGGAGGCTTACGGCCTAGTGCTGATGAAGAAGGGGGATGAGAC
GGAGCTCTTCCCAGGGGACCATCTGCAGCTCCTCAACCCTCCGTTTGACC
GGCTCGGGTGCCACTCGCTCACCTTGCAGCTGGCCGCCGCCCCTCCCCCC
TCACCCCCTTCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCGGCTCCTC
CCACAACAATTCCAACGCCCGCCGCGCCACCTTGACTGCAGCGGCTCCTG
TTCCTGCTCCTGCTGTTGCAACCGCTGCTGCTGCTGTCCGTCCCTCCCTC
CATTCCTCCCTGCTCTCCCCTCCCCCCCTCAGCCTCGAAGCGACTTTTGC
ATCGCCGGCTTGTGTCACGGGCGCAGCAAGGGAGGGAGGGACGATGGCCC
TCCCGCACCTGGACAGGGGGAAAGGGAGTGGGGAGGAGGAGGAGGGAGGG
AGAGAGGGAACGACGGGAAGGGGGGGGGCATTCGCAGGGTGCTCGGCGGA
TTATTTTCGCCGTGGTCCCTCTTGA
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Synonyms
Publications