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Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
chr1 | genome | chr1:67868..70247 - |
Analyses
This mRNA is derived from or has results from the following analyses
Homology
The following BLAST results are available for this feature:
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >NO01G00330.1 ID=NO01G00330.1|Name=NO01G00330.1|organism=Nannochloropsis oceanica|type=mRNA|length=1300bp GAGTGCTGGCGAGAAAACTTGAGACATTATCACCACAAAACTTCACGCAT ACACCCACGCATAGGGGGAATTTACGAAATCTACAGCGTAAGCCGCCTCT ACTTCCCTATCCCACCACTATGACGATGATGGTCCTCGATTCCTGGTCAC GCAAGCGCAAGTCCATCGCCACCGCCCCTGCCATTGCCCCCTCGGTCTCC TCTCCCTCGGCCTCGGTCGACAGTTTGATTGGCGATAACGAGGACCAGCA ACAGCGCTTCGTGCTGACACCAATCTCCCTGGACACACGCGTCGAACCAC GCACCCAAAAGCCTGCCTGTCCTGTCGTCCTCCCACTTGACGGCGAGCTC CGTTTGACGAAGACGGACATTTCCAAGGTGTTTGTCATCGATAAGGACCG CTTGGAGTTCATCTCGCGGGAGCACCTTTGCTTCACCACCACAAGCGTCC TCCCTCCCTCCTTTCCTCCCTCCATCCCTCCCTCCCTCCCGCCCGCCCGG CCGGCCAAGAAGTTCAGGACCGCCTCGAGCAGCAACCCTTCCTCTCTCCC GCCCTCCCCTCGTGTGGAGAGGGAGAATGAGGGGGAGGAGGAAGGGAGCG AGGAAGGGACGGAGGTAGAGGAGGAGGGGATGCGGTCCACAGTCCGTGTC CTCGTCCGCAGCCTTGCCACCAACCAGGTGTCCATCCGTCGTTCAGTGTA CGCGGAATGGGCCTCAGGAGGTAGGGAGGAGGCTTACGGCCTAGTGCTGA TGAAGAAGGGGGATGAGACGGAGCTCTTCCCAGGGGACCATCTGCAGCTC CTCAACCCTCCGTTTGACCGGCTCGGGTGCCACTCGCTCACCTTGCAGCT GGCCGCCGCCCCTCCCCCCTCACCCCCTTCCTCCCTCCCTTCCTCCCTCC CTTCCTCCCTCGGCTCCTCCCACAACAATTCCAACGCCCGCCGCGCCACC TTGACTGCAGCGGCTCCTGTTCCTGCTCCTGCTGTTGCAACCGCTGCTGC TGCTGTCCGTCCCTCCCTCCATTCCTCCCTGCTCTCCCCTCCCCCCCTCA GCCTCGAAGCGACTTTTGCATCGCCGGCTTGTGTCACGGGCGCAGCAAGG GAGGGAGGGACGATGGCCCTCCCGCACCTGGACAGGGGGAAAGGGAGTGG GGAGGAGGAGGAGGGAGGGAGAGAGGGAACGACGGGAAGGGGGGGGGCAT TCGCAGGGTGCTCGGCGGATTATTTTCGCCGTGGTCCCTCTTGATGGCGG GAAGGAAGAAGGGAAAGGGCGGGCGGGAGGAAGGGAGGAAGGGAGAGGGG back to topprotein sequence of NO01G00330.1 >NO01G00330.1-protein ID=NO01G00330.1-protein|Name=NO01G00330.1|organism=Nannochloropsis oceanica|type=polypeptide|length=375bp MTMMVLDSWSRKRKSIATAPAIAPSVSSPSASVDSLIGDNEDQQQRFVLT PISLDTRVEPRTQKPACPVVLPLDGELRLTKTDISKVFVIDKDRLEFISR EHLCFTTTSVLPPSFPPSIPPSLPPARPAKKFRTASSSNPSSLPPSPRVE RENEGEEEGSEEGTEVEEEGMRSTVRVLVRSLATNQVSIRRSVYAEWASG GREEAYGLVLMKKGDETELFPGDHLQLLNPPFDRLGCHSLTLQLAAAPPP SPPSSLPSSLPSSLGSSHNNSNARRATLTAAAPVPAPAVATAAAAVRPSL HSSLLSPPPLSLEATFASPACVTGAAREGGTMALPHLDRGKGSGEEEEGG REGTTGRGGAFAGCSADYFRRGPS* back to topmRNA from alignment at chr1:67868..70247- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >NO01G00330.1 ID=NO01G00330.1|Name=NO01G00330.1|organism=Nannochloropsis oceanica|type=mRNA|length=2380bp|location=Sequence derived from alignment at chr1:67868..70247- (Nannochloropsis oceanica) GAGTGCTGGCGAGAAAACTTGAGACATTATCACCACAAAACTTCACGCAT
ACACCCACGCATAGGGGGAATTTACGAAATCTACAGCGTAAGCCGCCTCT
ACTTCCCTATCCCACCACTATGACGATGATGGTCCTCGATTCCTGGTCAC
GCAAGGTTCGTTTGTCGTTGGTGCGGATGCTTTTTCCTCTTCCTCCCTCC
ACCCTCCCTTCCTCCCCCCCATCTCCTTCCCCCTCATCGACCCTCATCCC
CATTAAGCCACCACGAAGTATGAATGTACAGTTCATTGCCTTTGTGAGTG
GAGAATCGTAGGCCTGGTACTCTTGCCAAGCCACGGCTACACTCCGCATT
TTTCACTTGTGCTTGGAGACTTCCTTACCTCCTCGCCTTCCCGGCTGCTG
CCTCATCCCTTTCCCTCTCACTCTGCCAGCGCAAGTCCATCGCCACCGCC
CCTGCCATTGCCCCCTCGGTCTCCTCTCCCTCGGCCTCGGTCGACAGTTT
GATTGGCGATAACGAGGACCAGCAACAGCGCTTCGTGCTGACACCAATCT
CCCTGGTACGTGGACTCCCTTTCGTCTCCCAGTCCCTCCCTCCCTTCCTC
CCTCTCAATCTCCTTCCCTCTCTCTCAATCTCCCTCCCTCCCTCTCAAAT
TTCCCTCCTCCCCACATAACCTTTCCCCCCCTCCCCACTCCTCTCCTTCA
TCCCAACTCCCCCCTCCCCTCCTTCTTATTTCATCATCGTCACCATCCGT
CCACCACAGGACACACGCGTCGAACCACGCACCCAAAAGCCTGCCTGTCC
TGTCGTCCTCCCACTTGACGGCGAGCTCCGTTTGACGAAGACGGACATTT
CCAAGGTAGATATCTCTCCTTCCCTTTCTCCCTCCTTCCCTCTCTCCCTC
TATTTCTCTCTTTCTTCTTTCCCATGCATCCTCACTTCCCTCCCTCCCTC
ATTTCTAATGCGCCTAGATGCCTTATCCTTGCATTCCCATTCTTCCTCTG
GGCTTCATCACACGACCATCGCCATTGCCAATCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCCCTCCACCAGGTGTTTGTCATCGATAAGGACCGCTTGGA
GTTCATCTCGCGGGAGCACCTTTGCTTCACCACCACAAGCGTCCTCCCTC
CCTCCTTTCCTCCCTCCATCCCTCCCTCCCTCCCGCCCGCCCGGCCGGCC
AAGAAGTTCAGGACCGCCTCGAGCAGCAACCCTTCCTCTCTCCCGCCCTC
CCCTCGTGTGGAGAGGGAGAATGAGGGGGAGGAGGAAGGGAGCGAGGAAG
GGACGGAGGTAGAGGAGGAGGGGATGCGGTCCACAGTCCGTGTCCTCGTC
CGCAGCCTTGCCACCAACCAGGTCAGGGAGTGAGGGAGGGAGAGAGGGAG
GGAGGGAGGGAGTGGGGCTGGGAAGATACAGAGCGTCGATTTAAATATCA
TTGGAAAACACTAAATAGTCGTTTGGGCATGTACTCCCTCCTTCCCTCCC
TTCTTCCCTCCCTCCTCCCGTCCCTCCCCCCCTCCCAGGTGTCCATCCGT
CGTTCAGTGTACGCGGAATGGGCCTCAGGAGGTAGGGAGGAGGCTTACGG
CCTAGTGCTGATGAAGAAGGGGGATGAGACGGAGCTCTTCCCAGGGGACC
ATCTGCAGGTAGGGACGGAGGGTGGGAGGGAGGGAGGGAGGGAGGGAGGG
AGGAAGGATACGGACTGGTGCTGAATTGTTTTGGTGGAGTGTCTTGAAGA
GACGCAAGCACACACACACAAACACACACACACTCTCTCTCTCTTTGTCT
CCCTCTCTCTCTTTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCCCACACACACAGCTCCTCAACCCTCCGTTTGACCG
GCTCGGGTGCCACTCGCTCACCTTGCAGCTGGCCGCCGCCCCTCCCCCCT
CACCCCCTTCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCGGCTCCTCC
CACAACAATTCCAACGCCCGCCGCGCCACCTTGACTGCAGCGGCTCCTGT
TCCTGCTCCTGCTGTTGCAACCGCTGCTGCTGCTGTCCGTCCCTCCCTCC
ATTCCTCCCTGCTCTCCCCTCCCCCCCTCAGCCTCGAAGCGACTTTTGCA
TCGCCGGCTTGTGTCACGGGCGCAGCAAGGGAGGGAGGGACGATGGCCCT
CCCGCACCTGGACAGGGGGAAAGGGAGTGGGGAGGAGGAGGAGGGAGGGA
GAGAGGGAACGACGGGAAGGGGGGGGGCATTCGCAGGGTGCTCGGCGGAT
TATTTTCGCCGTGGTCCCTCTTGATGGCGGGAAGGAAGAAGGGAAAGGGC
GGGCGGGAGGAAGGGAGGAAGGGAGAGGGG back to topCoding sequence (CDS) from alignment at chr1:67868..70247- >NO01G00330.1 ID=NO01G00330.1|Name=NO01G00330.1|organism=Nannochloropsis oceanica|type=CDS|length=1125bp|location=Sequence derived from alignment at chr1:67868..70247- (Nannochloropsis oceanica) ATGACGATGATGGTCCTCGATTCCTGGTCACGCAAGCGCAAGTCCATCGC CACCGCCCCTGCCATTGCCCCCTCGGTCTCCTCTCCCTCGGCCTCGGTCG ACAGTTTGATTGGCGATAACGAGGACCAGCAACAGCGCTTCGTGCTGACA CCAATCTCCCTGGACACACGCGTCGAACCACGCACCCAAAAGCCTGCCTG TCCTGTCGTCCTCCCACTTGACGGCGAGCTCCGTTTGACGAAGACGGACA TTTCCAAGGTGTTTGTCATCGATAAGGACCGCTTGGAGTTCATCTCGCGG GAGCACCTTTGCTTCACCACCACAAGCGTCCTCCCTCCCTCCTTTCCTCC CTCCATCCCTCCCTCCCTCCCGCCCGCCCGGCCGGCCAAGAAGTTCAGGA CCGCCTCGAGCAGCAACCCTTCCTCTCTCCCGCCCTCCCCTCGTGTGGAG AGGGAGAATGAGGGGGAGGAGGAAGGGAGCGAGGAAGGGACGGAGGTAGA GGAGGAGGGGATGCGGTCCACAGTCCGTGTCCTCGTCCGCAGCCTTGCCA CCAACCAGGTGTCCATCCGTCGTTCAGTGTACGCGGAATGGGCCTCAGGA GGTAGGGAGGAGGCTTACGGCCTAGTGCTGATGAAGAAGGGGGATGAGAC GGAGCTCTTCCCAGGGGACCATCTGCAGCTCCTCAACCCTCCGTTTGACC GGCTCGGGTGCCACTCGCTCACCTTGCAGCTGGCCGCCGCCCCTCCCCCC TCACCCCCTTCCTCCCTCCCTTCCTCCCTCCCTTCCTCCCTCGGCTCCTC CCACAACAATTCCAACGCCCGCCGCGCCACCTTGACTGCAGCGGCTCCTG TTCCTGCTCCTGCTGTTGCAACCGCTGCTGCTGCTGTCCGTCCCTCCCTC CATTCCTCCCTGCTCTCCCCTCCCCCCCTCAGCCTCGAAGCGACTTTTGC ATCGCCGGCTTGTGTCACGGGCGCAGCAAGGGAGGGAGGGACGATGGCCC TCCCGCACCTGGACAGGGGGAAAGGGAGTGGGGAGGAGGAGGAGGGAGGG AGAGAGGGAACGACGGGAAGGGGGGGGGCATTCGCAGGGTGCTCGGCGGA TTATTTTCGCCGTGGTCCCTCTTGA back to top
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