NO01G00310.4, NO01G00310.4 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G00310.4
Unique Name	NO01G00310.4
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2682
Alignment location	chr1:59064..64433 -

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:59064..64433 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO01G00310.4 vs.
Match: EWM28951.1 (atp binding protein [Nannochloropsis gaditana])

HSP 1 Score: 827.0 bits (2135), Expect = 3.500e-236
Identity = 422/548 (77.01%), Postives = 464/548 (84.67%), Query Frame = 0

Query:    7 LLPLLLIFLLSVLLLLAEPTLASTAQLHGLLNSQRYAAAEDPNQEGQRSQFAVFSSPLPLLVRRGGGLGLGGKGIPGAGGRMPTPSPSSSNFLQRLQQQAGEGLDRLDLPGLQASVQGRVQEWGGHMQKHPKDALKVASVAVAAALTTSVARTPMVKRQCFFWFRAFPVYVHYRLTEVVMKAKGLSQEEQDVVWDRLHNQHANKMLAMVKQLKGYYVKICQFSSSRLDILPHIWIERFSTLQDDVPPKPGHEIIKIVENSYGKPIGEIFEMFDADRPLGSASIGQCHLAKLKGTGQVVAVKIQYPEAEQCFNSDMTTLRHFAEIAQPAYVKMLDEVRRQFMSEFDYRRESMHQDAIRIGLSEAGFDKAITVPRPYPELCTREVLVMEYIPGVKLTDVVRNRPTGTPPGSSLPSLQGQGIWARTFGAYLNKRYARNLVDSVVRVHGHQILKMGVFNGDPHPGNILLMPNGRIGLIDYGQIKSLKQDQRKSMARMIIALADGKKEDVIDLFVKMGFRSKRMDGDVINAVATLYFDRDDSEIIGKGINLQV 555
            LLPLLL+ LL +   +A  T+A    L   L+ +R    + P     + Q   F  P  LL  RGGG G G     G+GG  P P  SS+NF +RLQQQAG+GLD+LD PGLQAS+QGR+Q WG HMQKHPKDALKVASVA+AA +T +V + PMVKRQCFFWFRAFPVY+HYR TE VMKA+GL QEEQ++VWDRLHNQHAN MLAMVKQLKGYYVKICQFSSSRLDILPHIWI+RF+TLQDDVPPK GHEII+IVE+SYG+PI EIFE FDADRPLGSASIGQCHLAKLKG+GQ+VAVKIQYPEAE CFNSDMTTLR FAEIAQPAYVKMLDEVRRQFMSEFDYRRESM+QDAIRIGLS+AGFDKA+TVPRP  +LCT+EVLVMEYIPGVKLTD+VR+RP+G P        Q  G WART GAY NKRYAR LVD+VVRVHGHQILKMGVFNGDPHPGNILLMP+GRIGLIDYGQIKSLKQ QRKSMARMIIALADGKKE+VIDLFVKMGFRSKRMD DVINAVATLYFDRDDSE IGKG+NLQV
Sbjct:   25 LLPLLLLLLLLMPTFVASTTVAPLQSLFNRLSGRR----QPPFDGHAKPQGGTFPLPDLLLALRGGGGGGGVHIARGSGGPAPRPISSSTNFFKRLQQQAGDGLDKLDFPGLQASMQGRMQHWGEHMQKHPKDALKVASVAMAAVVTGTVVKNPMVKRQCFFWFRAFPVYLHYRWTEAVMKARGLDQEEQNLVWDRLHNQHANHMLAMVKQLKGYYVKICQFSSSRLDILPHIWIDRFTTLQDDVPPKSGHEIIRIVESSYGRPIEEIFEFFDADRPLGSASIGQCHLAKLKGSGQLVAVKIQYPEAESCFNSDMTTLRRFAEIAQPAYVKMLDEVRRQFMSEFDYRRESMYQDAIRIGLSKAGFDKAVTVPRPLLDLCTKEVLVMEYIPGVKLTDMVRSRPSGAPQ-------QKAGFWARTLGAYYNKRYARYLVDTVVRVHGHQILKMGVFNGDPHPGNILLMPSGRIGLIDYGQIKSLKQAQRKSMARMIIALADGKKEEVIDLFVKMGFRSKRMDADVINAVATLYFDRDDSEFIGKGVNLQV 561

The following BLAST results are available for this feature:

BLAST of NO01G00310.4 vs.

BLAST of NO01G00310.4 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
EWM28951.1	3.500e-236	77.01	atp binding protein [Nannochloropsis gaditana]	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO01G00310	NO01G00310	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO01G00310.4	NO01G00310.4-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO01G00310.4.cds1	NO01G00310.4.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00310.4.cds2	NO01G00310.4.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00310.4.cds3	NO01G00310.4.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00310.4.cds4	NO01G00310.4.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00310.4.cds5	NO01G00310.4.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00310.4.cds6	NO01G00310.4.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00310.4.cds7	NO01G00310.4.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00310.4.cds8	NO01G00310.4.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00310.4.cds9	NO01G00310.4.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00310.4.cds10	NO01G00310.4.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00310.4.cds11	NO01G00310.4.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00310.4.cds12	NO01G00310.4.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00310.4.cds13	NO01G00310.4.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00310.4.cds14	NO01G00310.4.cds14	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00310.4.cds15	NO01G00310.4.cds15	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr1:59064..64433-
coding sequence from alignment at chr1:59064..64433-

mRNA sequence

>NO01G00310.4 ID=NO01G00310.4|Name=NO01G00310.4|organism=Nannochloropsis oceanica|type=mRNA|length=2682bp
GCTGGGGGAAAGAAATTGGCAGGGCGGCACGCTACCCCGCTGCGCTGTCC
CTCTCTCGCCAATTAACTTCACTCCGCGAGTACCACGGAGTCAGTGCCTG
TCCTCTGCCTCTCTGCCAGGCGTCTACAAGACGCGTCCATCCACTGACTC
CATCCACGGACTCGACATGGCCTTGTTTACAACCTACTGACAGGCTGCCC
GCGCCGCCCCTTCCTCTGCTGGTGGCTACGTTGCTAGCTATTAAAAAGCC
TCACCAGTAGTGATGGGCATGCGTAGCCCCCTCCTGCCCCTCCTCCTCAT
CTTCCTACTCTCAGTGCTGCTGCTCCTCGCCGAGCCTACCTTAGCAAGCA
CCGCGCAGTTGCATGGCCTACTTAATAGCCAGCGATATGCTGCCGCCGAG
GACCCTAACCAGGAGGGGCAGCGAAGCCAATTTGCTGTCTTCTCCTCTCC
CCTCCCTCTCCTCGTTCGACGCGGCGGTGGACTAGGGTTGGGCGGCAAGG
GAATCCCAGGCGCGGGAGGGAGGATGCCGACCCCTTCCCCGTCATCTTCC
AATTTTCTCCAGAGGCTGCAGCAGCAGGCGGGCGAGGGGTTGGACAGGCT
GGACCTCCCAGGTCTCCAGGCGTCGGTGCAAGGCCGCGTGCAGGAGTGGG
GCGGACACATGCAGAAGCACCCCAAGGACGCTTTGAAGGTCGCGTCTGTG
GCCGTGGCAGCTGCGTTGACAACTTCGGTCGCGCGGACCCCGATGGTGAA
GCGCCAGTGCTTCTTCTGGTTTCGGGCCTTCCCCGTGTACGTGCACTACC
GCCTGACGGAGGTCGTCATGAAGGCCAAGGGACTCAGCCAGGAGGAGCAG
GACGTGGTGTGGGACCGGCTGCACAACCAGCACGCCAATAAGATGCTCGC
GATGGTCAAGCAGCTCAAAGGGTACTACGTGAAGATTTGTCAATTTTCCT
CCTCCCGACTCGACATCCTCCCCCACATTTGGATCGAGCGCTTTTCCACC
CTGCAGGACGACGTGCCTCCCAAGCCGGGCCATGAGATTATCAAGATAGT
CGAAAACTCCTACGGCAAGCCCATCGGCGAGATATTTGAAATGTTTGACG
CGGACCGGCCCCTGGGCTCGGCTTCAATAGGGCAATGCCACCTGGCCAAA
CTCAAGGGCACCGGACAGGTGGTGGCAGTCAAGATACAATACCCGGAGGC
CGAGCAATGCTTCAATAGTGACATGACCACCCTCCGACACTTCGCAGAGA
TCGCCCAGCCGGCGTACGTGAAGATGCTCGACGAGGTGCGGCGGCAGTTC
ATGTCCGAGTTCGACTACCGGCGAGAGAGCATGCACCAGGACGCCATTCG
CATCGGCTTGTCCGAGGCCGGGTTCGACAAGGCGATCACCGTCCCCCGCC
CCTACCCCGAGCTCTGCACGCGCGAAGTTCTAGTGATGGAATACATCCCG
GGGGTGAAGCTCACCGATGTCGTTCGGAACAGACCTACCGGCACGCCCCC
CGGGAGCTCGCTGCCGTCGTTGCAGGGGCAAGGCATCTGGGCCCGCACGT
TTGGCGCCTACTTAAACAAGAGGTACGCCCGCAATCTCGTGGACTCGGTC
GTGAGGGTGCATGGCCACCAAATCCTGAAAATGGGCGTCTTTAATGGCGA
CCCGCACCCGGGTAACATCCTCCTCATGCCCAACGGTAGGATCGGCCTGA
TCGACTACGGGCAAATCAAGAGCTTGAAGCAAGACCAGCGGAAGAGCATG
GCCCGCATGATCATCGCACTGGCGGACGGGAAGAAGGAGGACGTGATCGA
TTTGTTCGTCAAGATGGGTTTCCGGTCCAAGCGGATGGACGGCGATGTGA
TAAATGCAGTGGCCACCCTCTACTTCGACCGGGATGACAGCGAGATCATC
GGCAAGGGCATTAACTTACAGGTAGTGCAGGCAGAGAGGGAGAGAGAGAA
AGAAAAAAGGGGTTTGGAAAGAATCTGATCGATACATCAACACGGCCTGC
CTGCTTTCTTTGAGTGAGGGCTTGATTTCACGACTTATAATTCTATATAC
ATCTCTGTAAATTGCCTTTTGGTCCTGTGAATAGTACTACTTTGAGAACC
TGCAGAAGAAGGATCCTTTCCTGGCCATGCCCGAAGACTTTATCATGTGT
GGTACGTTTACGGGGATGGGAGGGCGGAGAAAGGGCAAAAAAGAAGAGGC
GGAGAGTCTCTCTGTCTTGAGCGAGAAATCGCTGCGCGACATTTATCATA
TCTGCGCTTGTTTGGCTCATATCGACACAAACTTCCCTCGCCGCTCCCAC
ATATCCCTATAGCCCGTGTCGCCGTGTTCATGCGCGGTCTCGGCACTTTT
TTGGACTACCCCATTTCCATCGCTAAGGCTTGGCGGCCTCTTGCTGTGGA
GGTTTTGAAGGAGAAAGATTTGGCGGGGGTGCATCCGTAGACAATAGTGA
AGGAGGAAGGGAAAGTGGGAGGGAGATTAAGATTAAAGCGCTGTTCATAT
AAGCATGTGTGTCTGGCACGGTAATACTTGTGATGTCTATGTGGAGTAAA
ACAAGAGGACCAATGAAATGGAGGAAATGGAAGTAGGAGATATTCTTGAG
CTATGCAGACTGCAAGGAAGCTTAAAAAGTAAATGCACCACAGTCAGATA
TGTGAGTACCACAAGAATACAAGTAACGGCTT

protein sequence of NO01G00310.4

>NO01G00310.4-protein ID=NO01G00310.4-protein|Name=NO01G00310.4|organism=Nannochloropsis oceanica|type=polypeptide|length=572bp
MGMRSPLLPLLLIFLLSVLLLLAEPTLASTAQLHGLLNSQRYAAAEDPNQ
EGQRSQFAVFSSPLPLLVRRGGGLGLGGKGIPGAGGRMPTPSPSSSNFLQ
RLQQQAGEGLDRLDLPGLQASVQGRVQEWGGHMQKHPKDALKVASVAVAA
ALTTSVARTPMVKRQCFFWFRAFPVYVHYRLTEVVMKAKGLSQEEQDVVW
DRLHNQHANKMLAMVKQLKGYYVKICQFSSSRLDILPHIWIERFSTLQDD
VPPKPGHEIIKIVENSYGKPIGEIFEMFDADRPLGSASIGQCHLAKLKGT
GQVVAVKIQYPEAEQCFNSDMTTLRHFAEIAQPAYVKMLDEVRRQFMSEF
DYRRESMHQDAIRIGLSEAGFDKAITVPRPYPELCTREVLVMEYIPGVKL
TDVVRNRPTGTPPGSSLPSLQGQGIWARTFGAYLNKRYARNLVDSVVRVH
GHQILKMGVFNGDPHPGNILLMPNGRIGLIDYGQIKSLKQDQRKSMARMI
IALADGKKEDVIDLFVKMGFRSKRMDGDVINAVATLYFDRDDSEIIGKGI
NLQVVQAEREREKEKRGLERI*

mRNA from alignment at chr1:59064..64433-

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO01G00310.4 ID=NO01G00310.4|Name=NO01G00310.4|organism=Nannochloropsis oceanica|type=mRNA|length=5370bp|location=Sequence derived from alignment at chr1:59064..64433- (Nannochloropsis oceanica)
GCTGGGGGAAAGAAATTGGCAGGGCGGCACGCTACCCCGCTGCGCTGTCC
CTCTCTCGCCAATTAACTTCACTCCGCGAGTACCACGGAGTCAGTGCCTG
TCCTCTGCCTCTCTGCCAGGCGTCTACAAGACGCGTCCATCCACTGACTC
CATCCACGGACTCGACATGGCCTTGTTTACAACCTACTGACAGGCTGCCC
GCGCCGCCCCTTCCTCTGCTGGTGGCTACGTTGCTAGCTATTAAAAAGCC
TCACCAGTAGTGATGGGCATGCGTAGCCCCCTCCTGCCCCTCCTCCTCAT
CTTCCTACTCTCAGTGCTGCTGCTCCTCGCCGAGCCTACCTTAGCAAGCA
CCGCGCAGTTGCATGGCCTACTTAATAGCCAGCGATATGCTGCCGCCGAG
GACCCTAACCAGGAGGGGCAGCGAAGCCAATTTGCTGTCTTCTCCTCTCC
CCTCCCTCTCCTCGTTCGACGCGGCGGTGGACTAGGGTTGGGCGGCAAGG
GAATCCCAGGCGCGGGAGGGAGGATGCCGACCCCTTCCCCGTCATCTTCC
AATTTTCTCCAGAGGCTGCAGCAGCAGGCGGGCGAGGGGTTGGACAGGCT
GGACCTCCCAGGTCTCCAGGCGTCGGTGCAAGGGTGCGTAAATTAGAAAG
GGAAGATTGAGGAGGGGAAGGAGAGCAGGGTTTGTATAATTCTCTTCGGC
TGATCAGGGTCCTTCATAGAGAGGCCGTCTTTCAAACCGCATTTCGTTGC
CTGCAGAACGTGACCCATGTAGTGGGTACAAAAATCCTCTCCCTCCCTCC
CTCCCTTCCTCCCTCCCTTCCTCCCTCCTTCCCTCCCCCACTCCATCCCT
TCCTCCCTCCCTCCCTCCCCCCCTCCCTCCTTCCTTCAGCCGCGTGCAGG
AGTGGGGCGGACACATGCAGAAGCACCCCAAGGACGCTTTGAAGGTCGCG
TCTGTGGCCGTGGCAGCTGCGTTGACAACTTCGGTCGCGCGGACCCCGAT
GGTGAAGCGCCAGGTATGAAGGGTGGGAGGGATGGAGAGAGGGAGGGAGG
GAGGGTGGGAGGGAGGGACGGAGGGAGGGACGGAGGGAGGGAGGGACGGA
GGGAGGGAGGGAGGGAGGGAGGGTGGTGAAATCTAGTTTGAAGTGTTTGT
AGAGAAAGCAAAAAGGAATAAAGGGGGGCAGGGAAGTAGCGAATGAGCCG
GTGCTTGAACTGACATCACCTGCACCCTCATCCATACCCTCATCCGTACC
CCCATCCGTACCCATGGGTACCTTTCCCCAGTGCTTCTTCTGGTTTCGGG
CCTTCCCCGTGTACGTGCACTACCGCCTGACGGAGGTCGTCATGAAGGCC
AAGGGACTCAGCCAGGTGGGCGCGTGGGCAGGAAGGGAAAGGAGGGGAAA
GAGGGAGAAGGGAGTTGGGAGGAGGGAGGAGTAGCGATGAGCAGAGGAAG
GAGGAATGGAAAAGGGAAGGAAGGGGGGACGGAGGGGGAAAGAAAGCAGG
AGAGAAGAGAAGGAGTGCTGGCCAGCGTCCCAGGTACATTGAACGGATAA
TGCCCGAGCTGCTGGTATCTATGTTCCCCGCTTATTCTTAATGACACCTT
CCCACCCAACCACCCACCATTTATTCCCTGGCCGGCAGGAGGAGCAGGAC
GTGGTGTGGGACCGGCTGCACAACCAGCACGCCAATAAGATGCTCGCGAT
GGTCAAGCAGCTCAAAGGTACGCCCTCCCTCCCTCCCTCCCTCCCTCCCT
CCCTCCCTCCCTCCCTTCCTTCCTTTCTCTCTCTATTCCTTTCCTGGCTC
TCTCATTTCTCCTTCCTTCCTCTCTTCCTTTTTCCCCTTTCTCCCGCCAT
CTAGGGTACTACGTGAAGATTTGTCAATTTTCCTCCTCCCGACTCGGTAA
GTAGACAGCCCTCATCTTTATCCTTATCCTAATCATTATCCTTATCCTTA
TCCTTATCCTCATCCTCATCCTCATCCCAATCCTAATCCTACTCTTAATC
CCAATCCTACTCCTACTCCTGATCCCAATCCCAATCCTAATCCTAATCCT
CATCCTAATCCTACTCCTTCTACGCCTACTAAGTCTACTACTCCTACTCC
TACTTCTGGTCCTAATTATAATCCTAATCCCAATCCTAATCCAACTTCTA
ACTCTAATCCTACACCTGATCCTGATCCTGATCCTGATCCTAATCCCACT
CGTACTCCTAATCCTCACACTAATCCTACTCCTAATCCTAATCCTATACT
CCTCATCCTACTCCTAATCCTAATCTCAATTCTAGTCCCAGTCCTTATCC
TTATCCGCTACTCTCTCTATCTGTCTTCCATCTCTCCATCAACCTCCCTT
ATTCCTCCCTCCTACGTCCCTCCCTCTCTATCTTGCACTTTCTGAAGCAC
TCCGCCTCTCACATGAAGAAGAGGAGTCAGGGTATTCAATTCTCCTCCCT
CCCTCCCTCCCTCCCTCCCTCCCTAGACATCCTCCCCCACATTTGGATCG
AGCGCTTTTCCACCCTGCAGGACGACGTGCCTCCCAAGCCGGGCCATGAG
ATTATCAAGATAGTCGAAAAGTAGGGATGGAGGGACGGAGGGACGGAGGG
ACGTAGGGAGAGATTTAATGAGAACGGATGTCTCTTTGTTTGGTTGAAGC
CCACCTATGATCTTCCTATTTAGAGCCCTCCCTCCCTCTCTCCCTCGCTA
GCTCCTACGGCAAGCCCATCGGCGAGATATTTGAAATGTTTGACGCGGAC
CGGCCCCTGGGCTCGGCTTCAATAGGGCAATGCCACCTGGCCAAACTCAA
GGTAGGTAGGTGGGGAGGGAGGGAGGGAGGGAGGGAGGGAGGAACGAATG
TGTGTGCGTGTCTCATTGTGATGCTACCTCGTGTACTGTACGTCCTGTAA
CTCATTTATGGTGATTTATCCTTCCCTCCCTCCCTCCCCCAGGGCACCGG
ACAGGTGGTGGCAGTCAAGATACAATACCCGGAGGCCGAGCAATGCTTCA
ATAGTGACATGACCACCCTCCGACACTTCGCAGAGGTAGGGAGGGAAGGA
GGGAGGGATGGAGGGATCATATTCACGTCATAAATATCCACCCTTACGCT
CTTTCTCCCACTTGAATTGCAGATCGCCCAGCCGGCGTACGTGAAGATGC
TCGACGAGGTGAGGAAGGAGGTCAGGGGAAGGACAGGGAAGAGGGGAGGA
AGGAGGTCGGGGTGAAGGATAGGAGAAGAGGAGAGAGACTATTATCGAGG
ACATACTCACTCTCCTTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCCC
CGTAGGTGCGGCGGCAGTTCATGTCCGAGTTCGACTACCGGCGAGAGAGC
ATGCACCAGGACGCCATTCGCATCGGCTTGTCCGAGGTAGGGAGGGAGGG
AGGGCGGGAAGGAGGGCGAGAGGGAATGGGAGTGTCACACGCGACATTGC
CACGAGCCCAAAATGGAATTTAGTCTTGCGTCGGATTCCCTCCCACCCTC
CCTCCCTCCGTCCCTCCCTGCTACGCCTTAGGCCGGGTTCGACAAGGCGA
TCACCGTCCCCCGCCCCTACCCCGAGCTCTGCACGCGCGAAGTTCTAGTG
ATGGAATACATCCCGGGGGTGAAGCTCACCGATGTCGTTCGGAACAGGTG
AGAAGGGAGGGAGGGAAGGGTGGAGGGAGGAAGGGAAAACTGGAAGTAGT
CTTCAAAGGCTCACACGCATACAACCCATCGCTCCCTATACAATACTATA
AATCTTAAACAGACCTACCGGCACGCCCCCCGGGAGCTCGCTGCCGTCGT
TGCAGGGGCAAGGCATCTGGGCCCGCACGTTTGGCGCCTACTTAAACAAG
AGGTAAGAAAGTGGAGGGAATGCAGTGACGTCGACAATCTCTTTCCGCTC
TTTTGCCATCTGGCAGGGGAATTAATCGTGGTCTGTCGCCCCCCCCCGTC
TACCCCCCTCCCTCCAGGTACGCCCGCAATCTCGTGGACTCGGTCGTGAG
GGTGCATGGCCACCAAATCCTGAAAATGGGCGTCTTTAATGGCGACCCGC
ACCCGGTGAGGGAGTGAGGAAGGAAGGCAAGGGGGGCATGTCATGGTGCT
GATTATGTTAAGATTTCTTTGACTGCTTCTGGTCCGACTCAAAGCGAGCT
CTCTACCTACTTGCTGTCTCTTATTCTATCTCTTCTTCCATTCTCTCGAA
CTCCTCGCAGGGTAACATCCTCCTCATGCCCAACGGTAGGATCGGCCTGA
TCGACTACGGGCAAATCAAGAGCTTGAAGCAAGACCAGCGGAAGAGCATG
GCCCGCATGATCATCGCACTGGCGGACGGGAAGAAGGAGGTGAGGAGAGG
GAGTGGGAGGAGGAGAAAAGTACATCAGTGAAGCTTATACTTGTCATATA
TACATACGCCATATAAACTTATGCTCATATTTTGTCCTATCTCTTCCCGC
GACTCATTCTTCCTCCGCTGCCTGCAGGACGTGATCGATTTGTTCGTCAA
GATGGGTTTCCGGTCCAAGCGGATGGACGGCGATGTGATAAATGCAGTGG
CCACCCTCTACTTCGACCGGGATGACAGCGAGATCATCGGCAAGGGCATT
AACTTACAGGTAGTGCAGGCAGAGAGGGAGAGAGAGAAAGAAAAAAGGGG
TTTGGAAAGAATCTGATCGATACATCAACACGGCCTGCCTGCTTTCTTTG
AGTGAGGGCTTGATTTCACGACTTATAATTCTATATACATCTCTGTAAAT
TGCCTTTTGGTCCTGTGAATAGTACTACTTTGAGAACCTGCAGAAGAAGG
ATCCTTTCCTGGCCATGCCCGAAGACTTTATCATGTGTGGTACGTTTACG
GGGATGGGAGGGCGGAGAAAGGGCAAAAAAGAAGAGGCGGAGAGTCTCTC
TGTCTTGAGCGAGAAATCGCTGCGCGACATTTATCATATCTGCGCTTGTT
TGGCTCATATCGACACAAACTTCCCTCGCCGCTCCCACATATCCCTATAG
CCCGTGTCGCCGTGTTCATGCGCGGTCTCGGCACTTTTTTGGACTACCCC
ATTTCCATCGCTAAGGCTTGGCGGCCTCTTGCTGTGGAGGTTTTGAAGGA
GAAAGATTTGGCGGGGGTGCATCCGTAGACAATAGTGAAGGAGGAAGGGA
AAGTGGGAGGGAGATTAAGATTAAAGCGCTGTTCATATAAGCATGTGTGT
CTGGCACGGTAATACTTGTGATGTCTATGTGGAGTAAAACAAGAGGACCA
ATGAAATGGAGGAAATGGAAGTAGGAGATATTCTTGAGCTATGCAGACTG
CAAGGAAGCTTAAAAAGTAAATGCACCACAGTCAGATATGTGAGTACCAC
AAGAATACAAGTAACGGCTT

Coding sequence (CDS) from alignment at chr1:59064..64433-

>NO01G00310.4 ID=NO01G00310.4|Name=NO01G00310.4|organism=Nannochloropsis oceanica|type=CDS|length=1716bp|location=Sequence derived from alignment at chr1:59064..64433- (Nannochloropsis oceanica)
ATGGGCATGCGTAGCCCCCTCCTGCCCCTCCTCCTCATCTTCCTACTCTC
AGTGCTGCTGCTCCTCGCCGAGCCTACCTTAGCAAGCACCGCGCAGTTGC
ATGGCCTACTTAATAGCCAGCGATATGCTGCCGCCGAGGACCCTAACCAG
GAGGGGCAGCGAAGCCAATTTGCTGTCTTCTCCTCTCCCCTCCCTCTCCT
CGTTCGACGCGGCGGTGGACTAGGGTTGGGCGGCAAGGGAATCCCAGGCG
CGGGAGGGAGGATGCCGACCCCTTCCCCGTCATCTTCCAATTTTCTCCAG
AGGCTGCAGCAGCAGGCGGGCGAGGGGTTGGACAGGCTGGACCTCCCAGG
TCTCCAGGCGTCGGTGCAAGGCCGCGTGCAGGAGTGGGGCGGACACATGC
AGAAGCACCCCAAGGACGCTTTGAAGGTCGCGTCTGTGGCCGTGGCAGCT
GCGTTGACAACTTCGGTCGCGCGGACCCCGATGGTGAAGCGCCAGTGCTT
CTTCTGGTTTCGGGCCTTCCCCGTGTACGTGCACTACCGCCTGACGGAGG
TCGTCATGAAGGCCAAGGGACTCAGCCAGGAGGAGCAGGACGTGGTGTGG
GACCGGCTGCACAACCAGCACGCCAATAAGATGCTCGCGATGGTCAAGCA
GCTCAAAGGGTACTACGTGAAGATTTGTCAATTTTCCTCCTCCCGACTCG
ACATCCTCCCCCACATTTGGATCGAGCGCTTTTCCACCCTGCAGGACGAC
GTGCCTCCCAAGCCGGGCCATGAGATTATCAAGATAGTCGAAAACTCCTA
CGGCAAGCCCATCGGCGAGATATTTGAAATGTTTGACGCGGACCGGCCCC
TGGGCTCGGCTTCAATAGGGCAATGCCACCTGGCCAAACTCAAGGGCACC
GGACAGGTGGTGGCAGTCAAGATACAATACCCGGAGGCCGAGCAATGCTT
CAATAGTGACATGACCACCCTCCGACACTTCGCAGAGATCGCCCAGCCGG
CGTACGTGAAGATGCTCGACGAGGTGCGGCGGCAGTTCATGTCCGAGTTC
GACTACCGGCGAGAGAGCATGCACCAGGACGCCATTCGCATCGGCTTGTC
CGAGGCCGGGTTCGACAAGGCGATCACCGTCCCCCGCCCCTACCCCGAGC
TCTGCACGCGCGAAGTTCTAGTGATGGAATACATCCCGGGGGTGAAGCTC
ACCGATGTCGTTCGGAACAGACCTACCGGCACGCCCCCCGGGAGCTCGCT
GCCGTCGTTGCAGGGGCAAGGCATCTGGGCCCGCACGTTTGGCGCCTACT
TAAACAAGAGGTACGCCCGCAATCTCGTGGACTCGGTCGTGAGGGTGCAT
GGCCACCAAATCCTGAAAATGGGCGTCTTTAATGGCGACCCGCACCCGGG
TAACATCCTCCTCATGCCCAACGGTAGGATCGGCCTGATCGACTACGGGC
AAATCAAGAGCTTGAAGCAAGACCAGCGGAAGAGCATGGCCCGCATGATC
ATCGCACTGGCGGACGGGAAGAAGGAGGACGTGATCGATTTGTTCGTCAA
GATGGGTTTCCGGTCCAAGCGGATGGACGGCGATGTGATAAATGCAGTGG
CCACCCTCTACTTCGACCGGGATGACAGCGAGATCATCGGCAAGGGCATT
AACTTACAGGTAGTGCAGGCAGAGAGGGAGAGAGAGAAAGAAAAAAGGGG
TTTGGAAAGAATCTGA

Synonyms

Publications