NO01G00280.1, NO01G00280.1 (mRNA) Nannochloropsis oceanica | NanDeSyn: Nannochloropsis Design & Synthesis Initiative

Overview


Name	NO01G00280.1
Unique Name	NO01G00280.1
Type	mRNA
Organism	Nannochloropsis oceanica (N. oceanica IMET1)
Sequence length	2454
Alignment location	chr1:47871..52283 +

Link to JBrowse

Properties

Mutants

Expression

No biomaterial libraries express this feature.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
chr1	genome	chr1:47871..52283 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Gene prediction for N. oceanica IMET1	2017-10-24
Homology annotation for N. oceanica IMET1	2017-10-25
InterPro analysis for N. oceanica IMET1	2017-10-25

Annotated Terms

Homology

[Close]

BLAST of NO01G00280.1 vs.
Match: OWZ24353.1 (Acetyl-coenzyme A transporter [Phytophthora megakarya])

HSP 1 Score: 444.9 bits (1143), Expect = 5.400e-121
Identity = 263/553 (47.56%), Postives = 348/553 (62.93%), Query Frame = 0

Query:  221 SMRSGAGVFERTRAVTPSFTSSSPSLKRPSGSSVKASMPVQAQARARRGSKATCGLHLAPGDPGSIALLLVLYTLQGIPMGLSASVPFLLTERVSYKQQALFSLASLPFSFKLLWAPVVDSTSFWGLGRRKAWLLPVQFLCGMLMLLASPLVGRWVGEGGPQETPDVPLLTAYFFVLYALMATQDIAVDGWALTMLSRENVGLASTCNTIGQTLGYFLAHVGFLALNSAETCNRFLRREPLEEGMVSLGGFLLFWGWIFLSTTLLVALKAEERKRDDDTTTISTPTVKETYRQLWRILQLGPVRSMCLVLLTVKAGFAVTDAATNLKLIEYGMPKEEIALMSPLLILTGILVPVLLSKATSGPRPLSVFLSAFSPRLVVGLLYAGLLPLAHHAYGHSSSLPPSLPPSLFRLLFLTTVGLREVAANSMFISQMAFFARVSDPTIGGTYMTLLNTVSNLGSSWVRTASLAALDVATLRNCSQDEEGGEGGMRWFRWWAGGKE-------GGKEGCVVVLDGYIVQLLACTVVGVGWLLVFKPVLLQLQALRQGEW 767
            S+R   GV +      PS T+ S S      +S  +  PVQ +      S           D  SI LLL+LYTLQGIPMGLS+S+PF+L E+V Y  QA FSL S PFS KLLWAP VDS      GRRK+WL+PVQF+C  LM++ S  +   +GEG  Q+ P V  LTA+FFVLY +MATQDIAVDGWA+TMLS +NVG ASTCNT+GQT+GYF+A+VGFLALN   TCN +LR EP +EG+V+L GF+ FWGW+   TTL V L   E+  D+D+  +   T+ +TY Q++ +L+L  V S+ +VLLT K GFA  ++  +LKL+EYGM KE++AL++P+LI  GI++PVL+ +     +PL++FL  +  RL VGLLYAGL+ +   A     S        LF  + L    L EVAAN M++ QMAF+AR+SDP+IGGTYMT LNTV+NLGS W  + SLA +D  T R C       E      R  +  +E       GG+  C++V DG+ V+ + C V+G  WLL F   +  LQ L+  +W
Sbjct:    3 SLRQRKGVSDDV----PSSTTGSASSSASDETSPMSIEPVQPKKDDDEAS-----------DWPSIVLLLLLYTLQGIPMGLSSSIPFILQEKVGYGDQATFSLVSWPFSLKLLWAPFVDSLYSERFGRRKSWLIPVQFICAALMVVGSWFMSDMLGEGEGQK-PHVIYLTAFFFVLYFMMATQDIAVDGWAITMLSEKNVGHASTCNTVGQTVGYFVAYVGFLALNDPTTCNSYLRSEPEDEGIVTLPGFMSFWGWVMFFTTLGVWLFKHEKPEDEDSERL---TIAQTYSQMYSVLRLPSVISLSVVLLTSKIGFAAAESVASLKLVEYGMKKEKLALLTPILIPLGIVIPVLIGRWIKPSQPLNLFLWGYPVRLAVGLLYAGLVYITPMAMAQDES-----SHYLFYGVILVIGALHEVAANMMYVPQMAFYARISDPSIGGTYMTFLNTVTNLGSKWPNSLSLAVVDHLTTRECLGGYFHDEVLAIGSRTCSDAEEREVCADAGGE--CLIVRDGFYVESIICLVIGAVWLLFFYRRIQFLQNLKIDKW 529

The following BLAST results are available for this feature:

BLAST of NO01G00280.1 vs.

BLAST of NO01G00280.1 vs.
Analysis Date: 2017-10-25 (Homology annotation for N. oceanica IMET1)
Total hits: 1


Match Name	E-value	Identity	Description
OWZ24353.1	5.400e-121	47.56	Acetyl-coenzyme A transporter [Phytophthora megaka...	[more]

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
NO01G00280	NO01G00280	Nannochloropsis oceanica (N. oceanica IMET1)	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
NO01G00280.1	NO01G00280.1-protein	Nannochloropsis oceanica (N. oceanica IMET1)	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
NO01G00280.1.cds1	NO01G00280.1.cds1	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00280.1.cds2	NO01G00280.1.cds2	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00280.1.cds3	NO01G00280.1.cds3	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00280.1.cds4	NO01G00280.1.cds4	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00280.1.cds5	NO01G00280.1.cds5	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00280.1.cds6	NO01G00280.1.cds6	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00280.1.cds7	NO01G00280.1.cds7	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00280.1.cds8	NO01G00280.1.cds8	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00280.1.cds9	NO01G00280.1.cds9	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00280.1.cds10	NO01G00280.1.cds10	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00280.1.cds11	NO01G00280.1.cds11	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00280.1.cds12	NO01G00280.1.cds12	Nannochloropsis oceanica (N. oceanica IMET1)	CDS
NO01G00280.1.cds13	NO01G00280.1.cds13	Nannochloropsis oceanica (N. oceanica IMET1)	CDS

Sequences

The following sequences are available for this feature:

mRNA sequence
protein sequence
mRNA from alignment at chr1:47871..52283+
coding sequence from alignment at chr1:47871..52283+

mRNA sequence

>NO01G00280.1 ID=NO01G00280.1|Name=NO01G00280.1|organism=Nannochloropsis oceanica|type=mRNA|length=2454bp
ATGCAGTACCCTGTACCTGTTATACTGCACTGTCTGCTTCGTAGCGTGTC
CGTCCCGCTCGCCTTTCGCAACGCAACCTGGCAGCCGGGCATATATAAGG
ACAAGTTCCATCCCCTACACGCGGCTGCTTCCGCCTCGTGTCCGCCTGGA
GCGATAGGGAATATACAACGGCCCTTCCCTCCTGTTAGGGACAGCAACTC
GAACGGCAGTGACCGCGAGCTCCTTCTCATTGACCGAGACCTGGAGGCCG
GCAGCAGCAGCACAAACCCCCTCACTGGCATGGAAGTGCGCGTCCGTCGC
AGTGGGCACGGGGAAGAGGAAGGAGGAGGGGGAAGGATATTCCCTCCCCC
CTACTCCACCGACGACGATCCCGACGGATATGCTCAAAGAGAACCGAGAA
GCAGCAGCCCAACAACCACGGGTTATGCACCCCAGATGCTCGTGGCGCCG
GGCGGGGACCATGTATTTGCCTATCGGTCAGGGACGACGGGGCCGCCCAC
CGCCCATTTGTATGCCATAGGTAGTAGCAGCGAGCAGGACACAGTGTCGG
TGTACCGCAGCATCAGGGCAAGCGGAGGTGGAGGAGGAGGAGGAAAAGGA
AGAGAAGAGGAAGGAGAAGGAGGAGGGGTCTTGCCCTCGGACTCGGACAT
TCTTCGGGGATCCATGCGCTCCGGCGCCGGCGTCTTTGAGCGTACTCGGG
CTGTAACTCCCTCCTTCACATCTTCCTCCCCCTCCCTGAAGCGTCCAAGT
GGCAGCAGCGTCAAAGCCTCTATGCCAGTACAAGCACAAGCACGTGCACG
GCGAGGGTCCAAGGCAACATGCGGCCTTCATCTGGCCCCCGGTGACCCGG
GTAGCATAGCTCTCCTGTTGGTTCTCTATACCTTGCAGGGTATTCCCATG
GGCTTGTCTGCCTCGGTGCCCTTCTTGCTCACGGAGCGCGTCTCGTACAA
GCAACAAGCACTCTTCTCCCTTGCCTCCTTGCCCTTCTCCTTCAAGCTCC
TGTGGGCGCCCGTCGTGGACTCCACCTCCTTCTGGGGACTGGGGAGAAGA
AAGGCCTGGCTGCTCCCCGTGCAGTTTCTGTGCGGAATGCTGATGCTTTT
GGCCAGCCCGCTGGTGGGGCGCTGGGTGGGGGAGGGAGGACCCCAGGAGA
CGCCCGACGTGCCGCTCCTGACGGCCTACTTCTTTGTGCTGTACGCGCTG
ATGGCGACCCAGGACATCGCCGTGGACGGGTGGGCTCTGACAATGCTCAG
CCGCGAAAACGTCGGCCTTGCCTCCACCTGCAACACCATCGGACAGACCT
TGGGTTACTTCCTCGCTCACGTGGGCTTCCTGGCCCTCAACTCGGCCGAA
ACCTGCAACCGCTTTTTAAGACGGGAGCCGCTCGAGGAAGGCATGGTCAG
CCTGGGCGGGTTCCTCCTCTTCTGGGGTTGGATCTTCCTGAGCACCACAC
TGCTAGTCGCCCTCAAGGCCGAGGAGCGCAAGCGGGACGACGACACGACC
ACCATCTCCACCCCCACTGTCAAGGAGACTTACAGGCAGCTCTGGCGCAT
ACTCCAGCTGGGTCCCGTACGGTCTATGTGCTTGGTGCTGCTGACGGTCA
AGGCTGGCTTCGCAGTGACCGACGCAGCCACGAATCTCAAACTGATCGAG
TACGGGATGCCCAAGGAGGAGATTGCCCTCATGTCGCCCTTGCTCATTCT
TACAGGCATCCTGGTGCCCGTCCTCCTGAGCAAGGCCACCTCCGGCCCTC
GGCCCCTCTCCGTCTTCCTGTCGGCCTTCTCTCCCCGCCTCGTCGTTGGA
CTCCTCTACGCCGGCCTACTCCCCCTCGCCCATCACGCCTACGGCCACTC
ATCCTCCCTCCCTCCCTCCCTACCTCCCTCCCTATTCCGCCTCCTCTTTC
TGACCACGGTGGGCTTGAGGGAGGTGGCGGCAAACAGCATGTTCATAAGT
CAGATGGCCTTCTTCGCCCGCGTCTCCGACCCCACCATTGGCGGTACATA
CATGACGCTGCTTAACACAGTCAGCAACCTTGGCTCGTCGTGGGTGCGCA
CGGCCTCCCTGGCCGCCCTCGACGTGGCCACTCTCCGCAACTGCAGCCAG
GACGAGGAAGGGGGAGAGGGTGGGATGCGGTGGTTTCGGTGGTGGGCGGG
GGGGAAGGAGGGAGGGAAGGAGGGGTGTGTGGTGGTGTTGGACGGATATA
TAGTGCAGCTGCTGGCGTGCACGGTGGTGGGCGTGGGCTGGCTGTTGGTC
TTCAAACCAGTGTTGCTGCAATTGCAGGCGCTTCGGCAGGGCGAATGGTG
CTTGGAAGGAGGGAGGGAGGGAGGGAGGGGCGTGACGGGGAGCGGGGAGG
AGGTGGGGAGGAGGTATGGAGGGAGGGAAGGGGCAAGTAGGAGGCCGAGG
GAGAGCACGGATGATGAAGAGAAGATCGTGGGCGGGGCGATCAAGTCGCA
TTGA

protein sequence of NO01G00280.1

>NO01G00280.1-protein ID=NO01G00280.1-protein|Name=NO01G00280.1|organism=Nannochloropsis oceanica|type=polypeptide|length=818bp
MQYPVPVILHCLLRSVSVPLAFRNATWQPGIYKDKFHPLHAAASASCPPG
AIGNIQRPFPPVRDSNSNGSDRELLLIDRDLEAGSSSTNPLTGMEVRVRR
SGHGEEEGGGGRIFPPPYSTDDDPDGYAQREPRSSSPTTTGYAPQMLVAP
GGDHVFAYRSGTTGPPTAHLYAIGSSSEQDTVSVYRSIRASGGGGGGGKG
REEEGEGGGVLPSDSDILRGSMRSGAGVFERTRAVTPSFTSSSPSLKRPS
GSSVKASMPVQAQARARRGSKATCGLHLAPGDPGSIALLLVLYTLQGIPM
GLSASVPFLLTERVSYKQQALFSLASLPFSFKLLWAPVVDSTSFWGLGRR
KAWLLPVQFLCGMLMLLASPLVGRWVGEGGPQETPDVPLLTAYFFVLYAL
MATQDIAVDGWALTMLSRENVGLASTCNTIGQTLGYFLAHVGFLALNSAE
TCNRFLRREPLEEGMVSLGGFLLFWGWIFLSTTLLVALKAEERKRDDDTT
TISTPTVKETYRQLWRILQLGPVRSMCLVLLTVKAGFAVTDAATNLKLIE
YGMPKEEIALMSPLLILTGILVPVLLSKATSGPRPLSVFLSAFSPRLVVG
LLYAGLLPLAHHAYGHSSSLPPSLPPSLFRLLFLTTVGLREVAANSMFIS
QMAFFARVSDPTIGGTYMTLLNTVSNLGSSWVRTASLAALDVATLRNCSQ
DEEGGEGGMRWFRWWAGGKEGGKEGCVVVLDGYIVQLLACTVVGVGWLLV
FKPVLLQLQALRQGEWCLEGGREGGRGVTGSGEEVGRRYGGREGASRRPR
ESTDDEEKIVGGAIKSH*

mRNA from alignment at chr1:47871..52283+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>NO01G00280.1 ID=NO01G00280.1|Name=NO01G00280.1|organism=Nannochloropsis oceanica|type=mRNA|length=4413bp|location=Sequence derived from alignment at chr1:47871..52283+ (Nannochloropsis oceanica)
ATGCAGGTGAGTGACGATGATGATGATGCATCAGCGCCTCCTTGTTTTTT
CACCTTTGATAGATGCATCCACCCACCCAACACACCCACCCTACACACAA
ACAGTACCCTGTACCTGTTATACTGCACTGTCTGCTTCGTAGCGTGTCCG
TCCCGCTCGCCTTTCGGTGAGCGTTTTGCTTCGTGCCTGTCGCCAAGACA
GGAGGGCCCATCCAAAGACTCGCATCGCTCAGCGTCGTGGTGCAACCATA
TACGCAGGAACTAAAGCAACGCAACCTGGCAGCCGGGCATATATAAGGAC
AAGGTACCAATGTAGCGATCATCTTGTCGGCTACATGTGCTGAAGGCTTT
CTTTGTGCCTCCCTTGCTCGATTTTCGAATGAGAGCTGGCGTTGTTATGC
TGACCCTGACTTCCTTTCCCTCCCTCGCACACCCCACACAGTTCCATCCC
CTACACGCGGCTGCTTCCGCCTCGTGTCCGCCTGGAGCGATAGGGAATAT
ACAACGGCCCTTCCCTCCTGTTAGGGACAGCAACTCGAACGGCAGTGACC
GCGAGCTCCTTCTCATTGACCGGTAAGGGCAGGGATCCCTCCTCTCTCTT
GGCTGTGGCTGTGGCAGATTGAGCCTCCTTTGGCTCAAAACAATCTAGCC
CTTCGTGATCCTTTATCCTTCTTCCCTTTGTCACTCCCTTTCTTCCCCCC
TCCCGCTCACTTCTTCCGCAAATCAGAGACCTGGAGGCCGGCAGCAGCAG
CACAAACCCCCTCACTGGCATGGAAGTGCGCGTCCGTCGCAGTGGGCACG
GGGAAGAGGAAGGAGGAGGGGGAAGGATATTCCCTCCCCCCTACTCCACC
GACGACGATCCCGACGGATATGCTCAAAGAGAACCGAGAAGCAGCAGCCC
AACAACCACGGGTTATGCACCCCAGATGCTCGTGGCGCCGGGCGGGGACC
ATGTATTTGCCTATCGGTCAGGGACGACGGGGCCGCCCACCGCCCATTTG
TATGCCATAGGTAGTAGCAGCGAGCAGGACACAGTGTCGGTGTACCGCAG
CATCAGGGCAAGCGGAGGTGGAGGAGGAGGAGGAAAAGGAAGAGAAGAGG
AAGGAGAAGGAGGAGGGGTCTTGCCCTCGGACTCGGACATTCTTCGGGGA
TCCATGCGCTCCGGCGCCGGCGTCTTTGAGCGTACTCGGGCTGTAACTCC
CTCCTTCACATCTTCCTCCCCCTCCCTGAAGCGTCCAAGTGGCAGCAGCG
TCAAAGCCTCTATGCCAGTACAAGCACAAGCACGTGCACGGCGAGGGTCC
AAGGCAACATGCGGCCTTCATCTGGCCCCCGGTGACCCGGGTAGCATAGC
TCTCCTGTTGGTTCTCTATACCTTGCAGGGTATTCCCATGGGCTTGTCTG
CCTCGGTGCCCTTCTTGCTCACGGTAAGCCAGATAGGAGGAGTTGGGGGA
AGAAGGCATGAAGGATGGGACGGAGGAAGGGAGGGAGGGAGGGAGGGAGG
GAAGAATAGTATTGCCGACGCTAAAGGAAAATGCGAGAACAACTCATCAT
CTATCTGCTCTCTTTGACGTTCGTCCTCCCTGCCTCCCTCTTTCCCACCC
TCCTCTTCTTTCTCTCCAGGAGCGCGTCTCGTACAAGCAACAAGCACTCT
TCTCCCTTGCCTCCTTGCCCTTCTCCTTCAAGCTCCTGTGGGCGCCCGTC
GTGGACTCCACCTCCTTCTGGGGACTGGGGAGAAGAAAGGCCTGGCTGCT
CCCCGTGCAGTTTCTGTGCGGAATGCTGATGCTTTTGGCCAGCCCGCTGG
TGGGGCGCTGGGTGGGGGAGGGAGGACCCCAGGAGACGCCCGACGTGCCG
GTGCGGAAGGGGGAAGGGGAAGGGGGAGCGGAGAGCGGGGAGGAGGAAAA
GGAAGCCAGGAAGGATCAAAATGTTTCGCGTAGCACCGAAGGTCACTAGC
CCACCTTTTTCCCCCTCTTCCTTCCCTTTCCACAGCTCCTGACGGCCTAC
TTCTTTGTGCTGTACGCGCTGATGGCGACCCAGGACATCGCCGTGGACGG
GTGGGCTCTGACAATGCTCAGCCGCGAAAACGTCGGCCTTGGTACGTGCC
CTGCCACGCACGCCCTCCCTCCCTCCCTCCCTCCCTCCCTTCCCTCTCAA
CCGCATCATCTCGATCCCTCCCCTCCCACAGCCTCCACCTGCAACACCAT
CGGACAGACCTTGGGTACGTGAAACATCATCTGCAGGATTTGGGTCCCGG
ATGAACATCCAACCCCATCCTCACCCCTCTCTCGCCTTCGCCCTCTCGCC
CTTCTTCCCTTAGGTTACTTCCTCGCTCACGTGGGCTTCCTGGCCCTCAA
CTCGGCCGAAACCTGCAACCGCTTTTTAAGACGGGAGCCGCTCGAGGAAG
GTATCTCGACATATATCCTTCCCCTCTCTCCCTCCCTCCCTCCCCTCCTC
TTCCCTCCTTTTTCGGTCATTTCACCTCCCTCCCCCTCTCCTTCCCCCCT
CCCTCCCCTAGGCATGGTCAGCCTGGGCGGGTTCCTCCTCTTCTGGGGTT
GGATCTTCCTGAGCACCACACTGCTAGTCGCCCTCAAGGCCGAGGAGCGC
AAGCGGGACGACGACACGACCACCATCTCCACCCCCACTGTCAAGGAGAC
TTACAGGCAGCTCTGGCGCATACTCCAGGTACGTAAAACACCCTTATGCC
TTTCCACCCTTCTTCCCTTGCTTTTCTCTCCCGCCCCTCGCTCACGTGCT
GCCCTCTGCCTTTCCCCGCGCCCTCCTCGCTCCCCCTCCAACAGCTGGGT
CCCGTACGGTCTATGTGCTTGGTGCTGCTGACGGTCAAGGCTGGCTTCGC
AGTGACCGACGCAGCCACGAATCTCAAACTGATCGAGTACGGGATGCCCA
AGGAGGAGATTGCCCTCATGTCGCCCTTGCTCATTCTTACAGGTGGGTTT
GTGATTGGTTCATTGCATGAATCATCGATAAATTGATTGGTTGATAGGTT
GTTGGACGGATTGAATGATCAATTGACTGACTGATTTCTTGATCCCTTGA
TTTCTTGATACCTTGATTCCTTGATTGAGTGTAATTTTACGATGAGTGCG
GAACCTTTGCTACCCTCCTCTGTGTCGCCTCACGCCTGTTCAAACCTTCC
CCCTGCCCACTCTCACGCGCCTTCCGACGCTTCCTTCACCTTCCTCTCTA
CGCTCCCCCTCTCCCGTTGCCTCCCTCCCGCCCCCTTCAGGCATCCTGGT
GCCCGTCCTCCTGAGCAAGGCCACCTCCGGCCCTCGGCCCCTCTCCGTCT
TCCTGTCGGCCTTCTCTCCCCGCCTCGTCGTTGGACTCCTCTACGCCGGC
CTACTCCCCCTCGCCCATCACGCCTACGGCCACTCATCCTCCCTCCCTCC
CTCCCTACCTCCCTCCCTATTCCGCCTCCTCTTTCTGACCACGGTGGGCT
TGAGGGAGGTGGCGGCAAACAGCATGTTCATAAGTCAGATGGCCTTCTTC
GCCCGCGTCTCCGACCCCACCATTGGCGGTACATACATGACGCTGCTTAA
CACAGTCAGGTGCGTGCACTTGCCCTCCCTCCCTCGCTTCCTCCCTTTCT
CCTTTCCTTCTTCCCTCCCCTCCTCCTTTCCTCCCTCCCTCCCTCCCTCC
CTCCCTCCCTCACTTGCCGGCCTGAGAGTGGTGTCGGCCGACACCACGTG
CATCAATCAGGAGGCTTTTGTAACCCTTGCCTCTGGCCCCGCTGTTGGTG
GTGTATACAACGATACACTCTTCACACGCTCAGGCAGTGGAATGATGACA
AAGGGACGGAAGGCCGCTTTATCCTCCTCCTCCTCCTCCTCTTCCTCCTC
CTTTGCTCCTTTCACCTCTCTTTCGCTCCGTCAGTCCCTCCCCCCCTCTC
TCTCGTCCCCGTCAAGATCTTGCCAGCCGTTACAACCGTCCCCACTCCCT
CAGTCTACCGTCTGCTCATCCCCCCTCCCACAGCAACCTTGGCTCGTCGT
GGGTGCGCACGGCCTCCCTGGCCGCCCTCGACGTGGCCACTCTCCGCAAC
TGCAGCCAGGACGAGGAAGGGGGAGAGGGTGGGATGCGGTGGTTTCGGTG
GTGGGCGGGGGGGAAGGAGGGAGGGAAGGAGGGGTGTGTGGTGGTGTTGG
ACGGATATATAGTGCAGCTGCTGGCGTGCACGGTGGTGGGCGTGGGCTGG
CTGTTGGTCTTCAAACCAGTGTTGCTGCAATTGCAGGCGCTTCGGCAGGG
CGAATGGTGCTTGGAAGGAGGGAGGGAGGGAGGGAGGGGCGTGACGGGGA
GCGGGGAGGAGGTGGGGAGGAGGTATGGAGGGAGGGAAGGGGCAAGTAGG
AGGCCGAGGGAGAGCACGGATGATGAAGAGAAGATCGTGGGCGGGGCGAT
CAAGTCGCATTGA

Coding sequence (CDS) from alignment at chr1:47871..52283+

>NO01G00280.1 ID=NO01G00280.1|Name=NO01G00280.1|organism=Nannochloropsis oceanica|type=CDS|length=2454bp|location=Sequence derived from alignment at chr1:47871..52283+ (Nannochloropsis oceanica)
ATGCAGTACCCTGTACCTGTTATACTGCACTGTCTGCTTCGTAGCGTGTC
CGTCCCGCTCGCCTTTCGCAACGCAACCTGGCAGCCGGGCATATATAAGG
ACAAGTTCCATCCCCTACACGCGGCTGCTTCCGCCTCGTGTCCGCCTGGA
GCGATAGGGAATATACAACGGCCCTTCCCTCCTGTTAGGGACAGCAACTC
GAACGGCAGTGACCGCGAGCTCCTTCTCATTGACCGAGACCTGGAGGCCG
GCAGCAGCAGCACAAACCCCCTCACTGGCATGGAAGTGCGCGTCCGTCGC
AGTGGGCACGGGGAAGAGGAAGGAGGAGGGGGAAGGATATTCCCTCCCCC
CTACTCCACCGACGACGATCCCGACGGATATGCTCAAAGAGAACCGAGAA
GCAGCAGCCCAACAACCACGGGTTATGCACCCCAGATGCTCGTGGCGCCG
GGCGGGGACCATGTATTTGCCTATCGGTCAGGGACGACGGGGCCGCCCAC
CGCCCATTTGTATGCCATAGGTAGTAGCAGCGAGCAGGACACAGTGTCGG
TGTACCGCAGCATCAGGGCAAGCGGAGGTGGAGGAGGAGGAGGAAAAGGA
AGAGAAGAGGAAGGAGAAGGAGGAGGGGTCTTGCCCTCGGACTCGGACAT
TCTTCGGGGATCCATGCGCTCCGGCGCCGGCGTCTTTGAGCGTACTCGGG
CTGTAACTCCCTCCTTCACATCTTCCTCCCCCTCCCTGAAGCGTCCAAGT
GGCAGCAGCGTCAAAGCCTCTATGCCAGTACAAGCACAAGCACGTGCACG
GCGAGGGTCCAAGGCAACATGCGGCCTTCATCTGGCCCCCGGTGACCCGG
GTAGCATAGCTCTCCTGTTGGTTCTCTATACCTTGCAGGGTATTCCCATG
GGCTTGTCTGCCTCGGTGCCCTTCTTGCTCACGGAGCGCGTCTCGTACAA
GCAACAAGCACTCTTCTCCCTTGCCTCCTTGCCCTTCTCCTTCAAGCTCC
TGTGGGCGCCCGTCGTGGACTCCACCTCCTTCTGGGGACTGGGGAGAAGA
AAGGCCTGGCTGCTCCCCGTGCAGTTTCTGTGCGGAATGCTGATGCTTTT
GGCCAGCCCGCTGGTGGGGCGCTGGGTGGGGGAGGGAGGACCCCAGGAGA
CGCCCGACGTGCCGCTCCTGACGGCCTACTTCTTTGTGCTGTACGCGCTG
ATGGCGACCCAGGACATCGCCGTGGACGGGTGGGCTCTGACAATGCTCAG
CCGCGAAAACGTCGGCCTTGCCTCCACCTGCAACACCATCGGACAGACCT
TGGGTTACTTCCTCGCTCACGTGGGCTTCCTGGCCCTCAACTCGGCCGAA
ACCTGCAACCGCTTTTTAAGACGGGAGCCGCTCGAGGAAGGCATGGTCAG
CCTGGGCGGGTTCCTCCTCTTCTGGGGTTGGATCTTCCTGAGCACCACAC
TGCTAGTCGCCCTCAAGGCCGAGGAGCGCAAGCGGGACGACGACACGACC
ACCATCTCCACCCCCACTGTCAAGGAGACTTACAGGCAGCTCTGGCGCAT
ACTCCAGCTGGGTCCCGTACGGTCTATGTGCTTGGTGCTGCTGACGGTCA
AGGCTGGCTTCGCAGTGACCGACGCAGCCACGAATCTCAAACTGATCGAG
TACGGGATGCCCAAGGAGGAGATTGCCCTCATGTCGCCCTTGCTCATTCT
TACAGGCATCCTGGTGCCCGTCCTCCTGAGCAAGGCCACCTCCGGCCCTC
GGCCCCTCTCCGTCTTCCTGTCGGCCTTCTCTCCCCGCCTCGTCGTTGGA
CTCCTCTACGCCGGCCTACTCCCCCTCGCCCATCACGCCTACGGCCACTC
ATCCTCCCTCCCTCCCTCCCTACCTCCCTCCCTATTCCGCCTCCTCTTTC
TGACCACGGTGGGCTTGAGGGAGGTGGCGGCAAACAGCATGTTCATAAGT
CAGATGGCCTTCTTCGCCCGCGTCTCCGACCCCACCATTGGCGGTACATA
CATGACGCTGCTTAACACAGTCAGCAACCTTGGCTCGTCGTGGGTGCGCA
CGGCCTCCCTGGCCGCCCTCGACGTGGCCACTCTCCGCAACTGCAGCCAG
GACGAGGAAGGGGGAGAGGGTGGGATGCGGTGGTTTCGGTGGTGGGCGGG
GGGGAAGGAGGGAGGGAAGGAGGGGTGTGTGGTGGTGTTGGACGGATATA
TAGTGCAGCTGCTGGCGTGCACGGTGGTGGGCGTGGGCTGGCTGTTGGTC
TTCAAACCAGTGTTGCTGCAATTGCAGGCGCTTCGGCAGGGCGAATGGTG
CTTGGAAGGAGGGAGGGAGGGAGGGAGGGGCGTGACGGGGAGCGGGGAGG
AGGTGGGGAGGAGGTATGGAGGGAGGGAAGGGGCAAGTAGGAGGCCGAGG
GAGAGCACGGATGATGAAGAGAAGATCGTGGGCGGGGCGATCAAGTCGCA
TTGA

Synonyms

Publications